Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0005301

Physical Location & Seq

Genomic Coordinates Reverse (-)

64187805 .. 64191752

Gene Structure 3948 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0511200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1740 bp

ATGTCCCCGGAGCGGCAATCCTGGACCATCGATCCCGACCTGGACGGGATCGACCTCGACGCCGCCGACTTCGCCTCCTCCCTCCCCATTAAAAAAGTCCCAAACGGCGACGTTTTCGAGGCCTCACGCGCCGGCGACGTCGACCGCCTCAGGTACTTGTTAGAGTCCGGGGTCAACGTCAACGCGCGTGACCAGTGGGACTCGGTGGCGCTCTACTACGCGTGCCTCGCCGGACACCTCGAGGCGGCGCGTATGTTGCTGGAGAGCGGAGCTATATGCACGGAGCATACTTTTGACGGCGATCGGTGTCATTACGCGGCGCTGAATTTGAAGGTGAGGAAGCTTTTGAAGGCGTTTGAGGCGCGGCCGCCGCCGTTGGGGCCGTTGCAGGCGGCGATGAGAGAGACGTTCTTGGGCTGTGCGGCTAATTGGGCCTATTTGGAGCAGGCCCAGCAGTTTGAAACTTCAGCAGGTCTTCCAGCCAGTGATGGATATTTTCCTCCAGATGTGGTATTTTTTGTTCAAGGGAGAGCCATTGAAGCTCATAGAATCATCTTAAGTGCTCGGTCACCATTTTTCAGAAGAAAGTTTGTGACTGATTGGAAAGAACGCAGAGAAGTGAGATTTTCAAGGGAAAAGTTGTCATATCCTGCTCTATACAGTCTCATCCAATTCTTTTACTCTGACAGACTAGAAGTTGCTGTAGATGATATGGAGGATCTTGTGAGGATCTGCAAAGTATGTAAATGTGAATCTTTACAAAGAATTCTCGAGAAAGAATTGATTCACCAAAAGTATGCCGAGTACAAAGCATTGAGAGACATAGACAGCTCTATAAAACGCTTCATCTTACAAGGTGTCTCTCTTCCTGAAGAAGATCGGCTTCCTGCAACTATGCATGAGATCCTTCAGATTTCCCTTGCCAATTCCACCAGGGAACTTAACCTAGATAATGGTGTCAAAGAATTAACATCTTCTGTGGGTACCATGCAAATCAGTGATTTTGTAGAGGATCTTGCAGATGTTTGTGTAAAAGTTGATAAAAAGAGGTTTCGATGCCATCAAGTGGTTTTAGCATCAAGGTCAGAGTATTTTAAAGCAAGATTATCCCGTATGAAGGACTTCCATGAAGGAAAAAGTGATATACCTGTTCATACCCTTCCATGTCTTGAGGAACATGATTTAAGCTCTGAAGCATTCGAGAAGATGATCGAGTATATGTACACTGACGGATTGAAGGATATAGACCCGGATCAGGCGGGGGAAGTCTTTGATGCTGCCTCTAGATATTTATTATTTCCTCTTAAGCGTGCTGTTGCTGATGTACTACTGCCACACCTGGAAAACGTCTCACCGGCAGAATTGTGCAATTGGCTTATATTATCAGACATGTATGGCGTTCTGAAGATAAGGGAATTTTGTTTAGATACAATAGCTTGTAACTTTGAGACATTTGCTGATACTCATGAGTTCCGAGCAATGCTGTTGACACTCCCTCCACCATCTGGGGATTCATCACTTCGCACCACTAATCCAAGTGCACCGGGAGCTGAAGTCAATACAGACCAACGCAATGTTCTTGATGACTTAAGAGAAAAATGGCTTGAAGCTGAAGCTGCGGAGCTTGACAAGAGAGATGAGAGCGCACTACTTTTTGATAAACGACTTGAGATGCTTGTGGTTGTTGCAGAACAAGAAAAGTGTGATGCAGATCTTACTGATGATATCAATGGTTCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0032446 GO:0036211 GO:0043161 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0051603 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko03010 map03010

Pfam Domains

Protein Families

zf-RING_2 zf-rbx1

Protein Analysis

579

Amino Acids

65.67

Weight (kDa)

4.9

Isoelectric Point (pI)

47.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ank_4	PF13637	39 - 87	1e-08	Ankyrin repeats (many copies)
Ank_2	PF12796	41 - 108	7.7e-07	Ankyrin repeats (3 copies)
BTB	PF00651	168 - 264	1.9e-15	BTB/POZ domain
BTB	PF00651	338 - 443	9e-15	BTB/POZ domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005301)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G38900 AT5G38900
fragaria_vesca	FvH4_6g46390 FvH4_6g46390 FvH4_6g46390 FvH4_6g46390
malus_domestica	MD09G1074300.v1.1 MD17G1065700.v1.1
prunus_persica	Prupe.3G249000_v2.0.a1 Prupe.3G249100_v2.0.a1 Prupe.3G249100_v2.0.a1 Prupe.3G249100_v2.0.a1 Prupe.3G249100_v2.0.a1 Prupe.3G249100_v2.0.a1
pyrus_communis	pycom09g00140 pycom17g06590
rosa_chinensis	RchiOBHm_Chr2g0164921
rosa_laevigata	RLG00000021497
rosa_multiflora	Rmu_co8477167.1_g000001 Rmu_sc0001097.1_g000001
rosa_roxburghii	Rroxscaffold_2G00086210 Rroxscaffold_5G00335800
rosa_rugosa	Rorug02G0511200 Rorug02G0511300
rosa_samantha	Rh2AG579500 Rh2BG590500 Rh2CG561200 Rh2DG600900
rosa_wichuraiana	Rw2G048100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	141
AbsI	CCTCGAGG	1 cut(s)	239
Acc36I	ACCTGC	1 cut(s)	461
Acc65I	GGTACC	1 cut(s)	983
AccB1I	GGYRCC	1 cut(s)	983
AccB7I	CCANNNNNTGG	2 cut(s)	1066, 1505
AccBSI	CCGCTC	2 cut(s)	13, 267
AccI	GTMKAC	1 cut(s)	141
AccII	CGCG	7 cut(s)	129, 185, 187, 221, 250, 317, 364
AclWI	GGATC	7 cut(s)	26, 56, 726, 737, 898, 1020, 1260
AcoI	YGGCCR	1 cut(s)	365
AcsI	RAATTY	3 cut(s)	325, 765, 1415
AcuI	CTGAAG	7 cut(s)	450, 891, 893, 1212, 1424, 1572, 1632
AcyI	GRCGYC	2 cut(s)	60, 138
AfaI	GTAC	5 cut(s)	155, 806, 985, 1223, 1326
AfiI	CCNNNNNNNGG	7 cut(s)	12, 244, 377, 1066, 1117, 1255, 1505
AflII	CTTAAG	3 cut(s)	556, 1304, 1588
AflIII	ACRYGT	2 cut(s)	219, 1389
AgsI	TTSAA	8 cut(s)	331, 349, 461, 524, 539, 630, 1237, 1607
AjnI	CCWGG	4 cut(s)	20, 39, 932, 1338
AjuI	GAANNNNNNNTTGG	2 cut(s)	1560, 1592
Alw21I	GWGCWC	2 cut(s)	565, 1543
Alw26I	GTCTC	6 cut(s)	398, 668, 813, 865, 1354, 1442
Alw44I	GTGCAC	1 cut(s)	1539
AlwI	GGATC	7 cut(s)	26, 56, 726, 737, 898, 1020, 1260
Ama87I	CYCGRG	2 cut(s)	239, 770
AoxI	GGCC	5 cut(s)	120, 365, 380, 432, 447
ApaLI	GTGCAC	1 cut(s)	1539
ApeKI	GCWGC	2 cut(s)	1277, 1616
ApoI	RAATTY	3 cut(s)	325, 765, 1415
Asp700I	GAANNNNTTC	2 cut(s)	783, 1121
Asp718I	GGTACC	1 cut(s)	983
AspLEI	GCGC	7 cut(s)	131, 187, 211, 250, 322, 364, 1646
AspS9I	GGNCC	4 cut(s)	24, 380, 432, 448
AsuC2I	CCSGG	4 cut(s)	8, 169, 1250, 1545
AsuHPI	GGTGA	4 cut(s)	346, 561, 779, 1344
AvaI	CYCGRG	2 cut(s)	239, 770
AvaII	GGWCC	1 cut(s)	24
AxyI	CCTNAGG	1 cut(s)	149
BaeGI	GKGCMC	1 cut(s)	1543
BanI	GGYRCC	1 cut(s)	983
BbsI	GAAGAC	1 cut(s)	467
Bbv12I	GWGCWC	2 cut(s)	565, 1543
BbvI	GCAGC	2 cut(s)	1264, 1603
BccI	CCATC	4 cut(s)	35, 482, 1068, 1510
BceAI	ACGGC	4 cut(s)	121, 313, 358, 367
BciT130I	CCWGG	4 cut(s)	22, 41, 934, 1340
BcnI	CCSGG	4 cut(s)	8, 169, 1250, 1545
BcoDI	GTCTC	6 cut(s)	398, 668, 813, 865, 1354, 1442
BfaI	CTAG	4 cut(s)	692, 947, 1284, 1738
BfmI	CTRYAG	1 cut(s)	702
BfoI	RGCGCY	2 cut(s)	212, 323
BfrI	CTTAAG	3 cut(s)	556, 1304, 1588
BfuAI	ACCTGC	1 cut(s)	461
BglI	GCCNNNNNGGC	1 cut(s)	379
BglII	AGATCT	1 cut(s)	1711
Bme1390I	CCNGG	8 cut(s)	8, 22, 41, 169, 934, 1250, 1340, 1545
Bme18I	GGWCC	1 cut(s)	24
BmeT110I	CYCGRG	2 cut(s)	239, 770
BmgT120I	GGNCC	4 cut(s)	24, 380, 432, 448
BmiI	GGNNCC	3 cut(s)	381, 985, 1735
BmrFI	CCNGG	8 cut(s)	8, 22, 41, 169, 934, 1250, 1340, 1545
BmsI	GCATC	5 cut(s)	1046, 1085, 1264, 1662, 1696
BpiI	GAAGAC	1 cut(s)	467
BpmI	CTGGAG	2 cut(s)	281, 486
BpuEI	CTTGAG	2 cut(s)	1190, 1688
BpuMI	CCSGG	4 cut(s)	8, 169, 1250, 1545
Bsa29I	ATCGAT	1 cut(s)	30
BsaBI	GATNNNNATC	1 cut(s)	1710
BsaHI	GRCGYC	2 cut(s)	60, 138
BsaJI	CCNNGG	3 cut(s)	6, 168, 933
BsaXI	ACNNNNNCTCC	6 cut(s)	59, 89, 1480, 1510, 1539, 1569
Bsc4I	CCNNNNNNNGG	7 cut(s)	12, 244, 377, 1066, 1117, 1255, 1505
Bse118I	RCCGGY	2 cut(s)	131, 1354
Bse1I	ACTGG	2 cut(s)	193, 483
Bse21I	CCTNAGG	1 cut(s)	149
Bse3DI	GCAATG	2 cut(s)	1485, 1579
Bse8I	GATNNNNATC	1 cut(s)	1710
BseBI	CCWGG	4 cut(s)	22, 41, 934, 1340
BseCI	ATCGAT	1 cut(s)	30
BseDI	CCNNGG	3 cut(s)	6, 168, 933
BseGI	GGATG	1 cut(s)	666
BseJI	GATNNNNATC	1 cut(s)	1710
BseLI	CCNNNNNNNGG	7 cut(s)	12, 244, 377, 1066, 1117, 1255, 1505
BseMI	GCAATG	2 cut(s)	1485, 1579
BseMII	CTCAG	1 cut(s)	163
BseNI	ACTGG	2 cut(s)	193, 483
BseRI	GAGGAG	1 cut(s)	67
BseSI	GKGCMC	1 cut(s)	1543
BseX3I	CGGCCG	1 cut(s)	365
BseXI	GCAGC	2 cut(s)	1264, 1603
BseYI	CCCAGC	1 cut(s)	450
Bsh1236I	CGCG	7 cut(s)	129, 185, 187, 221, 250, 317, 364
Bsh1285I	CGRYCG	3 cut(s)	145, 304, 368
BshFI	GGCC	5 cut(s)	122, 367, 382, 434, 449
BshNI	GGYRCC	1 cut(s)	983
BshVI	ATCGAT	1 cut(s)	30
BsiEI	CGRYCG	3 cut(s)	145, 304, 368
BsiHKAI	GWGCWC	2 cut(s)	565, 1543
BsiHKCI	CYCGRG	2 cut(s)	239, 770
BsiSI	CCGG	7 cut(s)	8, 132, 168, 231, 1250, 1355, 1544
BslFI	GGGAC	2 cut(s)	83, 212
BslI	CCNNNNNNNGG	7 cut(s)	12, 244, 377, 1066, 1117, 1255, 1505
BsmAI	GTCTC	6 cut(s)	398, 668, 813, 865, 1354, 1442
BsmBI	CGTCTC	2 cut(s)	398, 1354
BsmFI	GGGAC	2 cut(s)	83, 212
BsmI	GAATGC	1 cut(s)	1196
BsnI	GGCC	5 cut(s)	122, 367, 382, 434, 449
BsoBI	CYCGRG	2 cut(s)	239, 770
Bsp1286I	GDGCHC	2 cut(s)	565, 1543
Bsp1407I	TGTACA	1 cut(s)	1221
BspANI	GGCC	5 cut(s)	122, 367, 382, 434, 449
BspCNI	CTCAG	1 cut(s)	162
BspDI	ATCGAT	1 cut(s)	30
BspFNI	CGCG	7 cut(s)	129, 185, 187, 221, 250, 317, 364
BspHI	TCATGA	1 cut(s)	1465
BspLI	GGNNCC	3 cut(s)	381, 985, 1735
BspMI	ACCTGC	1 cut(s)	461
BspPI	GGATC	7 cut(s)	26, 56, 726, 737, 898, 1020, 1260
BspT107I	GGYRCC	1 cut(s)	983
BspTI	CTTAAG	3 cut(s)	556, 1304, 1588
BsrBI	CCGCTC	2 cut(s)	13, 267
BsrDI	GCAATG	2 cut(s)	1485, 1579
BsrFI	RCCGGY	2 cut(s)	131, 1354
BsrGI	TGTACA	1 cut(s)	1221
BsrI	ACTGG	2 cut(s)	193, 483
BssAI	RCCGGY	2 cut(s)	131, 1354
BssECI	CCNNGG	3 cut(s)	6, 168, 933
BssNI	GRCGYC	2 cut(s)	60, 138
Bst2UI	CCWGG	4 cut(s)	22, 41, 934, 1340
Bst4CI	ACNGT	1 cut(s)	662
Bst6I	CTCTTC	1 cut(s)	870
BstACI	GRCGYC	2 cut(s)	60, 138
BstAFI	CTTAAG	3 cut(s)	556, 1304, 1588
BstAUI	TGTACA	1 cut(s)	1221
BstC8I	GCNNGC	5 cut(s)	133, 223, 390, 447, 1311
BstDEI	CTNAG	1 cut(s)	149
BstEII	GGTNACC	1 cut(s)	567
BstF5I	GGATG	1 cut(s)	666
BstFNI	CGCG	7 cut(s)	129, 185, 187, 221, 250, 317, 364
BstH2I	RGCGCY	2 cut(s)	212, 323
BstHHI	GCGC	7 cut(s)	131, 187, 211, 250, 322, 364, 1646
BstMAI	GTCTC	6 cut(s)	398, 668, 813, 865, 1354, 1442
BstMCI	CGRYCG	3 cut(s)	145, 304, 368
BstNI	CCWGG	4 cut(s)	22, 41, 934, 1340
BstNSI	RCATGY	1 cut(s)	1393
BstPI	GGTNACC	1 cut(s)	567
BstSCI	CCNGG	8 cut(s)	6, 20, 39, 167, 932, 1248, 1338, 1543
BstSFI	CTRYAG	1 cut(s)	702
BstSLI	GKGCMC	1 cut(s)	1543
BstUI	CGCG	7 cut(s)	129, 185, 187, 221, 250, 317, 364
BstV1I	GCAGC	2 cut(s)	1264, 1603
BstV2I	GAAGAC	1 cut(s)	467
BstX2I	RGATCY	5 cut(s)	718, 729, 903, 1012, 1711
BstYI	RGATCY	5 cut(s)	718, 729, 903, 1012, 1711
BstZI	CGGCCG	1 cut(s)	365
Bsu15I	ATCGAT	1 cut(s)	30
Bsu36I	CCTNAGG	1 cut(s)	149
BsuRI	GGCC	5 cut(s)	122, 367, 382, 434, 449
BsuTUI	ATCGAT	1 cut(s)	30
BtgZI	GCGATG	1 cut(s)	410
BtsCI	GGATG	1 cut(s)	666
BtsIMutI	CAGTG	4 cut(s)	200, 490, 1003, 1224
BveI	ACCTGC	1 cut(s)	461
Cac8I	GCNNGC	5 cut(s)	133, 223, 390, 447, 1311
CciI	TCATGA	1 cut(s)	1465
CciNI	GCGGCCGC	1 cut(s)	365
CfoI	GCGC	7 cut(s)	131, 187, 211, 250, 322, 364, 1646
Cfr10I	RCCGGY	2 cut(s)	131, 1354
Cfr13I	GGNCC	4 cut(s)	24, 380, 432, 448
ClaI	ATCGAT	1 cut(s)	30
CseI	GACGC	1 cut(s)	68
Csp6I	GTAC	5 cut(s)	154, 805, 984, 1222, 1325
CviAII	CATG	7 cut(s)	899, 988, 1127, 1164, 1178, 1390, 1466
CviQI	GTAC	5 cut(s)	154, 805, 984, 1222, 1325
DdeI	CTNAG	1 cut(s)	149
DraI	TTTAAA	1 cut(s)	1096
EaeI	YGGCCR	1 cut(s)	365
EagI	CGGCCG	1 cut(s)	365
Eam1104I	CTCTTC	1 cut(s)	870
EarI	CTCTTC	1 cut(s)	870
EclXI	CGGCCG	1 cut(s)	365
Eco147I	AGGCCT	1 cut(s)	122
Eco32I	GATATC	1 cut(s)	1726
Eco47I	GGWCC	1 cut(s)	24
Eco52I	CGGCCG	1 cut(s)	365
Eco57I	CTGAAG	7 cut(s)	450, 891, 893, 1212, 1424, 1572, 1632
Eco81I	CCTNAGG	1 cut(s)	149
Eco88I	CYCGRG	2 cut(s)	239, 770
Eco91I	GGTNACC	1 cut(s)	567
EcoO65I	GGTNACC	1 cut(s)	567
EcoRI	GAATTC	1 cut(s)	765
EcoRII	CCWGG	4 cut(s)	20, 39, 932, 1338
EcoRV	GATATC	1 cut(s)	1726
EcoT22I	ATGCAT	1 cut(s)	900
Esp3I	CGTCTC	2 cut(s)	398, 1354
FaeI	CATG	7 cut(s)	902, 991, 1130, 1167, 1181, 1393, 1469
FalI	AAGNNNNNCTT	2 cut(s)	867, 899
FaqI	GGGAC	2 cut(s)	83, 212
FatI	CATG	7 cut(s)	898, 987, 1126, 1163, 1177, 1389, 1465
FauI	CCCGC	1 cut(s)	1252
FblI	GTMKAC	1 cut(s)	141
FokI	GGATG	1 cut(s)	653
FspBI	CTAG	4 cut(s)	692, 947, 1284, 1738
GlaI	GCGC	7 cut(s)	130, 186, 210, 249, 321, 363, 1645
GsaI	CCCAGC	1 cut(s)	454
GsuI	CTGGAG	2 cut(s)	281, 486
HaeII	RGCGCY	2 cut(s)	212, 323
HaeIII	GGCC	5 cut(s)	122, 367, 382, 434, 449
HapII	CCGG	7 cut(s)	8, 132, 168, 231, 1250, 1355, 1544
HgaI	GACGC	1 cut(s)	68
HhaI	GCGC	7 cut(s)	131, 187, 211, 250, 322, 364, 1646
Hin1I	GRCGYC	2 cut(s)	60, 138
Hin1II	CATG	7 cut(s)	902, 991, 1130, 1167, 1181, 1393, 1469
Hin6I	GCGC	7 cut(s)	129, 185, 209, 248, 320, 362, 1644
HinP1I	GCGC	7 cut(s)	129, 185, 209, 248, 320, 362, 1644
HincII	GTYRAC	4 cut(s)	142, 175, 181, 1488
HindII	GTYRAC	4 cut(s)	142, 175, 181, 1488
HindIII	AAGCTT	1 cut(s)	341
HinfI	GANTC	6 cut(s)	164, 200, 549, 752, 784, 1511
HpaII	CCGG	7 cut(s)	8, 132, 168, 231, 1250, 1355, 1544
HphI	GGTGA	4 cut(s)	346, 561, 779, 1344
Hpy166II	GTNNAC	6 cut(s)	142, 175, 181, 1224, 1488, 1541
Hpy188I	TCNGA	8 cut(s)	581, 685, 912, 1087, 1192, 1387, 1404, 1475
Hpy8I	GTNNAC	6 cut(s)	142, 175, 181, 1224, 1488, 1541
Hpy99I	CGWCG	4 cut(s)	62, 113, 140, 143
HpyAV	CCTTC	7 cut(s)	325, 343, 917, 1111, 1124, 1169, 1231
HpyCH4III	ACNGT	1 cut(s)	662
HpyCH4IV	ACGT	5 cut(s)	111, 138, 177, 407, 1347
HpyF3I	CTNAG	1 cut(s)	149
HpySE526I	ACGT	5 cut(s)	111, 138, 177, 407, 1347
Hsp92I	GRCGYC	2 cut(s)	60, 138
Hsp92II	CATG	7 cut(s)	902, 991, 1130, 1167, 1181, 1393, 1469
HspAI	GCGC	7 cut(s)	129, 185, 209, 248, 320, 362, 1644
KpnI	GGTACC	1 cut(s)	987
KroI	GCCGGC	1 cut(s)	131
KroNI	GCCGGC	1 cut(s)	133
LmnI	GCTCC	6 cut(s)	10, 269, 283, 442, 1547, 1621
Lsp1109I	GCAGC	2 cut(s)	1264, 1603
LweI	GCATC	5 cut(s)	1046, 1085, 1264, 1662, 1696
MaeI	CTAG	4 cut(s)	692, 947, 1284, 1738
MaeII	ACGT	5 cut(s)	111, 138, 177, 407, 1347
MaeIII	GTNAC	4 cut(s)	188, 567, 592, 1439
MbiI	CCGCTC	2 cut(s)	13, 267
MboII	GAAGA	8 cut(s)	467, 594, 857, 884, 887, 966, 1216, 1417
MfeI	CAATTG	1 cut(s)	1369
MflI	RGATCY	5 cut(s)	718, 729, 903, 1012, 1711
MhlI	GDGCHC	2 cut(s)	565, 1543
MluI	ACGCGT	1 cut(s)	219
MlyI	GAGTC	2 cut(s)	173, 194
Mph1103I	ATGCAT	1 cut(s)	900
MreI	CGCCGGCG	1 cut(s)	131
MroNI	GCCGGC	1 cut(s)	131
MroXI	GAANNNNTTC	2 cut(s)	783, 1121
MseI	TTAA	8 cut(s)	90, 557, 942, 968, 1095, 1184, 1305, 1589
MspCI	CTTAAG	3 cut(s)	556, 1304, 1588
MspI	CCGG	7 cut(s)	8, 132, 168, 231, 1250, 1355, 1544
MspR9I	CCNGG	8 cut(s)	8, 22, 41, 169, 934, 1250, 1340, 1545
MunI	CAATTG	1 cut(s)	1369
Mva1269I	GAATGC	1 cut(s)	1196
MvaI	CCWGG	4 cut(s)	22, 41, 934, 1340
MvnI	CGCG	7 cut(s)	129, 185, 187, 221, 250, 317, 364
NaeI	GCCGGC	1 cut(s)	133
NciI	CCSGG	4 cut(s)	8, 169, 1250, 1545
NgoMIV	GCCGGC	1 cut(s)	131
NlaIII	CATG	7 cut(s)	902, 991, 1130, 1167, 1181, 1393, 1469
NlaIV	GGNNCC	3 cut(s)	381, 985, 1735
NmeAIII	GCCGAG	1 cut(s)	826
NmuCI	GTSAC	3 cut(s)	188, 567, 592
NotI	GCGGCCGC	1 cut(s)	365
NsiI	ATGCAT	1 cut(s)	900
NspI	RCATGY	1 cut(s)	1393
PaeR7I	CTCGAG	2 cut(s)	239, 770
PagI	TCATGA	1 cut(s)	1465
PceI	AGGCCT	1 cut(s)	122
PciI	ACATGT	1 cut(s)	1389
PcsI	WCGNNNNNNNCGW	1 cut(s)	63
PctI	GAATGC	1 cut(s)	1196
PdiI	GCCGGC	1 cut(s)	133
PdmI	GAANNNNTTC	2 cut(s)	783, 1121
PfeI	GAWTC	4 cut(s)	549, 752, 784, 1511
PflMI	CCANNNNNTGG	2 cut(s)	1066, 1505
PfoI	TCCNGGA	1 cut(s)	20
Ple19I	CGATCG	1 cut(s)	304
PleI	GAGTC	2 cut(s)	172, 194
PpsI	GAGTC	2 cut(s)	172, 194
PscI	ACATGT	1 cut(s)	1389
Psp6I	CCWGG	4 cut(s)	20, 39, 932, 1338
PspEI	GGTNACC	1 cut(s)	567
PspFI	CCCAGC	1 cut(s)	450
PspGI	CCWGG	4 cut(s)	20, 39, 932, 1338
PspN4I	GGNNCC	3 cut(s)	381, 985, 1735
PspPI	GGNCC	4 cut(s)	24, 380, 432, 448
PspXI	VCTCGAGB	1 cut(s)	239
PsrI	GAACNNNNNNTAC	2 cut(s)	504, 536
PsuI	RGATCY	5 cut(s)	718, 729, 903, 1012, 1711
PvuI	CGATCG	1 cut(s)	304
RsaI	GTAC	5 cut(s)	155, 806, 985, 1223, 1326
RsaNI	GTAC	5 cut(s)	154, 805, 984, 1222, 1325
SalI	GTCGAC	1 cut(s)	140
SaqAI	TTAA	8 cut(s)	90, 557, 942, 968, 1095, 1184, 1305, 1589
Sau96I	GGNCC	4 cut(s)	24, 380, 432, 448
SchI	GAGTC	2 cut(s)	173, 194
ScrFI	CCNGG	8 cut(s)	8, 22, 41, 169, 934, 1250, 1340, 1545
SduI	GDGCHC	2 cut(s)	565, 1543
SfaNI	GCATC	5 cut(s)	1046, 1085, 1264, 1662, 1696
SfcI	CTRYAG	1 cut(s)	702
Sfr274I	CTCGAG	2 cut(s)	239, 770
SgrAI	CRCCGGYG	1 cut(s)	131
SinI	GGWCC	1 cut(s)	24
SlaI	CTCGAG	2 cut(s)	239, 770
SmlI	CTYRAG	7 cut(s)	239, 556, 770, 1169, 1304, 1588, 1667
SmoI	CTYRAG	7 cut(s)	239, 556, 770, 1169, 1304, 1588, 1667
SseBI	AGGCCT	1 cut(s)	122
SspMI	CTAG	4 cut(s)	692, 947, 1284, 1738
StuI	AGGCCT	1 cut(s)	122
StyD4I	CCNGG	8 cut(s)	6, 20, 39, 167, 932, 1248, 1338, 1543
TaaI	ACNGT	1 cut(s)	662
TaiI	ACGT	5 cut(s)	114, 141, 180, 410, 1350
TaqII	GACCGA	1 cut(s)	555
TatI	WGTACW	3 cut(s)	804, 1221, 1324
TauI	GCSGC	9 cut(s)	16, 65, 248, 320, 367, 370, 373, 395, 425
TfiI	GAWTC	4 cut(s)	549, 752, 784, 1511
Tru1I	TTAA	8 cut(s)	90, 557, 942, 968, 1095, 1184, 1305, 1589
Tru9I	TTAA	8 cut(s)	90, 557, 942, 968, 1095, 1184, 1305, 1589
TscAI	CASTG	4 cut(s)	200, 490, 1003, 1231
TseFI	GTSAC	3 cut(s)	188, 567, 592
TseI	GCWGC	2 cut(s)	1277, 1616
Tsp45I	GTSAC	3 cut(s)	188, 567, 592
TspDTI	ATGAA	5 cut(s)	835, 1130, 1142, 1143, 1503
TspGWI	ACGGA	2 cut(s)	296, 1245
TspRI	CASTG	4 cut(s)	200, 490, 1003, 1231
Van91I	CCANNNNNTGG	2 cut(s)	1066, 1505
Vha464I	CTTAAG	3 cut(s)	556, 1304, 1588
VneI	GTGCAC	1 cut(s)	1539
VpaK11BI	GGWCC	1 cut(s)	24
XapI	RAATTY	3 cut(s)	325, 765, 1415
XbaI	TCTAGA	1 cut(s)	1283
XceI	RCATGY	1 cut(s)	1393
XhoI	CTCGAG	2 cut(s)	239, 770
XmiI	GTMKAC	1 cut(s)	141
XmnI	GAANNNNTTC	2 cut(s)	783, 1121
XspI	CTAG	4 cut(s)	692, 947, 1284, 1738
ZraI	GACGTC	1 cut(s)	139
Zsp2I	ATGCAT	1 cut(s)	900

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.