Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0010982

Physical Location & Seq

Genomic Coordinates Forward (+)

5324550 .. 5330963

Gene Structure 6414 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1065900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2379 bp

ATGCAGGGATCGGCGCAGAGCTCTGCGGCTCAGCCGGAGGCGATATTGAAATGGCTTCAGAAGGAAATGGGGTACCGGCCTTTGGGTCCGTACAATGCTGCTTCTAGCAAATCGCAGTTGCCCTCAATCGACTCGCTGAGGAAGATTTGCCGTGGGAATATGATACCCATTTGGAATTTCTTGATTACCCGCGTGAAGTCTGAGAATACGGTGAAGAATATTCGGAGGAATATAACGGTTCATGGTGGTGGCGGCGGTGGAGGGGACGGTGGCGCATTGGCAAAGGTGGGGAAGGAGGAGGGCACGAGGAGTAAAGGGGGTAGGAGAAAGGAGAAACTTGGGGAGGCTGCGAGTGCGGCAGAGACCAGGGAGGCCGCGCTGCAAGAGAGGGACTTGGCGGTAAAGGAGGTGGAGAAATTGAGGAACATTGTGAAGAGACAGAGGAAGGATTTGAAGGCCAGAATGTTGGAGGTTTCGAGGGCTGAGGCTGAACGGAAGAGGATGCTTGATGAACGCTCTAAAAAAAGGCATAAGCAAGTAATGTTGGAGGCTTACTATCAACAGTGTGATGAAGCGGAAAAGATATTTGCGGAGTATCATAAACGTCTTCGTTATTATGTTAATCAAGCAAGGGATGCTCAAAGGTCAGGTGTTGATTCATCTTTTGAATTGGTTAACAGCTTTGGTCCAAACAGTGAAAAGGAAGCTGTTTATTCAACTCTTAAGGGCAGTAAAGCAGCAGATGATGTGCTTCTTATCGAAACCACTCGGGAAAGAAACATCCGAAAGGCCTGTGAATCTCTTGCAGCACATATGATTGAAAAAATTCGCAGTTCTTTTCCCGCATATGAAGGAAGTGGTATTCATTTGAATCCTCAGTTAGAAGCAGCCAAGTTAGGTTTTGATTTTGATGGGGAATTACCTGTTGAGGTTAGAGCTGCAATAGTGAATGGGTTGAAGAATCCTCCTCAATTGCTTCAGGCAATTACTTCATACACGTCACGGTTGAAATCTCTCATTTCCAGAGAGATAGAGAAAATTGATGTTAGAGCTGATGCAGAAACTTTAAGGTACAAGTATGAGAACAACCGAGTTATCGATGTTTCTTCTCCTGATGTGAGTTCACCATTACACTATCAACTTTATGGTAATGGAAAGATAGGAGTTGATGCACCTTCTAGAGGAACTCAACTTCTTGAAAGACAGAAAGCACATGTTCAACAATTTTTGGCTACTGAAGATGCACTGAACAAAGCTGCAGAAGCTAGGGATCTGTGTCAAAAACTTATAAAACGCTTGCATGGCGATAGTGATGTAATTTCTTCAGGAACATCACAAAATGTGGGCAGTCTTAGGCAACTTGAGCTGGAGGTTTGGACCAAAGAAAGAGAAGTTGCTGGCTTGAGGGCTAGCTTGAATACGCTGATGTCTGAAATACAACGCTTAAATAAATTATGCGCGGAAAGGAAAGAAGCTGAAGATTCTTTGAAAAAGAAGTGGAAGAAGATTGAAGAATTTGACTCCCGCAGATCAGAACTTGAAATCATATATACTTCATTACTAAAAGTTAACATGGATGCCGCTGCGTTCTGGAATCAGCAGCCATTATCCGCGCGGGAGTATGCATCAAGCACTATTATTCCAGCATGCACAATAGTTATGGATCTTTCAAATAGTGCAAAAGATCTTATTGAAAGAGAAGTTTCTGCTTTTGACCAAAGTCCTGATAATAGCCTCTACATGCTTCCAGCAACTCCACAGGCACTATTGGAGTCCATGGGTACAAATGGGTCTACTGGACCTGAAGCTGTTGCTGCTGCAGAAAAAAATGCTGCTATATTAACTGCAAAAGCAGGTGCTAGGGATCCATCAGCAATACCATCCATATGTCGCATATCTGCTGCCCTTCAATATCCTGGTGGTTTGGAGGGTTCAGATGCTGCCTTAGCATCAATCCTAGAGTCCCTGGAATTCTGTTTGAAACTTCGTGGTTCCGAGGCTAGTGTGTTGGAGGACTTGGCAAAGGCAATCAATTTGGTTCATACAAGACAGGATCTTGTTGAAAGTGGTCATGTGTTGTTGAACCATGCCTATAGAGCTCAACAAGAATATGAAAGGACAACGAGTTATTGCTTAAATGTGGCTGCTGAGCAAGAGAAAACTGTCATGGAGAAATGGTTGCCCGAACTTAAATCTGCAATTTTGAGTGCTCAGAAGTGCTTGGAAGATTGCAACTATGTTAGGGGGTTGCTTGACGAATGGTGGGAGCAACCAGCAGCAACTGTTGTTGACTGGGTCCTAGTCGATGGATTAAATGTTGCTGCTTGGCATAATCATGTGAAGCAGCTCCTTGCATTTTATGATCAGGAGCACTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005819 GO:0005856 GO:0005874 GO:0005876 GO:0008017 GO:0008092 GO:0015630 GO:0015631 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0051011 GO:0099080 GO:0099081 GO:0099512 GO:0099513

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HAUS5

Protein Analysis

793

Amino Acids

88.13

Weight (kDa)

7.55

Isoelectric Point (pI)

49.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HAUS5	PF14817	12 - 778	4.1e-250	HAUS augmin-like complex subunit 5

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0010982)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G38880
fragaria_vesca	FvH4_6g46350 FvH4_6g46350 FvH4_6g46350 FvH4_6g46350
malus_domestica	MD09G1074500.v1.1 MD17G1065900.v1.1
prunus_persica	Prupe.3G248800_v2.0.a1 Prupe.3G248800_v2.0.a1
pyrus_communis	pycom17g06620
rosa_chinensis	RchiOBHm_Chr2g0164851
rosa_laevigata	RLG00000021494
rosa_multiflora	Rmu_sc0006207.1_g000007
rosa_rugosa	Rorug02G0511000 Rorug02G0511000 Rorug02G0511100
rosa_samantha	Rh2AG579100 Rh2CG560800 Rh2DG600500
rosa_wichuraiana	Rw2G048070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1289
AarI	CACCTGC	1 cut(s)	1844
Acc36I	ACCTGC	1 cut(s)	1844
Acc65I	GGTACC	1 cut(s)	72
AccB1I	GGYRCC	1 cut(s)	72
AccI	GTMKAC	1 cut(s)	1793
AccII	CGCG	5 cut(s)	192, 377, 1460, 1613, 1615
AclWI	GGATC	6 cut(s)	16, 1278, 1671, 1859, 1872, 2061
AcsI	RAATTY	4 cut(s)	175, 825, 1514, 1970
AcuI	CTGAAG	6 cut(s)	41, 962, 1257, 1308, 1497, 1824
AfaI	GTAC	4 cut(s)	74, 92, 1073, 1783
AfiI	CCNNNNNNNGG	2 cut(s)	82, 1181
AflII	CTTAAG	1 cut(s)	722
AflIII	ACRYGT	2 cut(s)	996, 1213
AjiI	CACGTC	1 cut(s)	999
AjnI	CCWGG	3 cut(s)	365, 1915, 1965
Alw21I	GWGCWC	4 cut(s)	23, 2101, 2212, 2373
Alw26I	GTCTC	2 cut(s)	356, 430
AlwI	GGATC	6 cut(s)	16, 1278, 1671, 1859, 1872, 2061
AlwNI	CAGNNNCTG	2 cut(s)	1940, 2282
Ama87I	CYCGRG	1 cut(s)	768
AoxI	GGCC	4 cut(s)	77, 372, 456, 789
ApoI	RAATTY	4 cut(s)	175, 825, 1514, 1970
Asp700I	GAANNNNTTC	1 cut(s)	825
Asp718I	GGTACC	1 cut(s)	72
AspLEI	GCGC	5 cut(s)	16, 275, 379, 1460, 1615
AspS9I	GGNCC	5 cut(s)	86, 686, 1377, 1799, 2296
AsuHPI	GGTGA	2 cut(s)	223, 1116
AsuNHI	GCTAGC	1 cut(s)	1409
AvaI	CYCGRG	1 cut(s)	768
AvaII	GGWCC	5 cut(s)	86, 686, 1377, 1799, 2296
BaeGI	GKGCMC	1 cut(s)	305
BamHI	GGATCC	1 cut(s)	1864
BanI	GGYRCC	1 cut(s)	72
BanII	GRGCYC	2 cut(s)	23, 2101
BauI	CACGAG	1 cut(s)	304
BbsI	GAAGAC	1 cut(s)	599
Bbv12I	GWGCWC	4 cut(s)	23, 2101, 2212, 2373
BbvCI	CCTCAGC	2 cut(s)	137, 483
BccI	CCATC	4 cut(s)	905, 1876, 1888, 2300
BceAI	ACGGC	1 cut(s)	135
BciT130I	CCWGG	3 cut(s)	367, 1917, 1967
BclI	TGATCA	1 cut(s)	2362
BcoDI	GTCTC	2 cut(s)	356, 430
BfaI	CTAG	8 cut(s)	105, 1179, 1266, 1410, 1860, 1958, 2001, 2300
BfmI	CTRYAG	3 cut(s)	1257, 1818, 2092
BfrI	CTTAAG	1 cut(s)	722
BfuAI	ACCTGC	1 cut(s)	1844
BglII	AGATCT	1 cut(s)	1684
BlpI	GCTNAGC	2 cut(s)	30, 2148
Bme1390I	CCNGG	3 cut(s)	367, 1917, 1967
Bme18I	GGWCC	5 cut(s)	86, 686, 1377, 1799, 2296
BmeT110I	CYCGRG	1 cut(s)	768
BmgBI	CACGTC	1 cut(s)	999
BmgT120I	GGNCC	5 cut(s)	86, 686, 1377, 1799, 2296
BmiI	GGNNCC	5 cut(s)	74, 87, 1866, 1993, 2297
BmrFI	CCNGG	3 cut(s)	367, 1917, 1967
BmrI	ACTGGG	1 cut(s)	2302
BmsI	GCATC	9 cut(s)	492, 625, 1045, 1159, 1231, 1567, 1634, 1927, 1958
BmtI	GCTAGC	1 cut(s)	1413
BmuI	ACTGGG	1 cut(s)	2302
BoxI	GACNNNNGTC	1 cut(s)	1719
BpiI	GAAGAC	1 cut(s)	599
BpmI	CTGGAG	1 cut(s)	1388
Bpu10I	CCTNAGC	3 cut(s)	137, 483, 1945
Bpu1102I	GCTNAGC	2 cut(s)	30, 2148
BpuEI	CTTGAG	2 cut(s)	1382, 1423
Bsa29I	ATCGAT	1 cut(s)	1098
BsaI	GGTCTC	1 cut(s)	356
BsaJI	CCNNGG	5 cut(s)	151, 366, 1776, 1965, 1995
BsaXI	ACNNNNNCTCC	3 cut(s)	2162, 2192, 2360
Bsc4I	CCNNNNNNNGG	2 cut(s)	82, 1181
Bse118I	RCCGGY	1 cut(s)	75
Bse1I	ACTGG	2 cut(s)	1801, 2297
BseBI	CCWGG	3 cut(s)	367, 1917, 1967
BseCI	ATCGAT	1 cut(s)	1098
BseDI	CCNNGG	5 cut(s)	151, 366, 1776, 1965, 1995
BseGI	GGATG	5 cut(s)	507, 640, 780, 1582, 1880
BseLI	CCNNNNNNNGG	2 cut(s)	82, 1181
BseMII	CTCAG	7 cut(s)	44, 128, 192, 474, 890, 2139, 2225
BseNI	ACTGG	2 cut(s)	1801, 2297
BseRI	GAGGAG	3 cut(s)	311, 322, 957
BseSI	GKGCMC	1 cut(s)	305
Bsh1236I	CGCG	5 cut(s)	192, 377, 1460, 1613, 1615
BshFI	GGCC	4 cut(s)	79, 374, 458, 791
BshNI	GGYRCC	1 cut(s)	72
BshVI	ATCGAT	1 cut(s)	1098
BsiHKAI	GWGCWC	4 cut(s)	23, 2101, 2212, 2373
BsiHKCI	CYCGRG	1 cut(s)	768
BsiSI	CCGG	2 cut(s)	35, 76
BslFI	GGGAC	3 cut(s)	278, 404, 1948
BslI	CCNNNNNNNGG	2 cut(s)	82, 1181
BsmAI	GTCTC	2 cut(s)	356, 430
BsmFI	GGGAC	3 cut(s)	278, 404, 1948
BsnI	GGCC	4 cut(s)	79, 374, 458, 791
Bso31I	GGTCTC	1 cut(s)	356
BsoBI	CYCGRG	1 cut(s)	768
Bsp1286I	GDGCHC	5 cut(s)	23, 305, 2101, 2212, 2373
Bsp143I	GATC	8 cut(s)	8, 1270, 1529, 1663, 1684, 1864, 2053, 2362
Bsp1720I	GCTNAGC	2 cut(s)	30, 2148
Bsp19I	CCATGG	1 cut(s)	1776
BspANI	GGCC	4 cut(s)	79, 374, 458, 791
BspCNI	CTCAG	7 cut(s)	43, 129, 193, 475, 889, 2140, 2224
BspDI	ATCGAT	1 cut(s)	1098
BspFNI	CGCG	5 cut(s)	192, 377, 1460, 1613, 1615
BspLI	GGNNCC	5 cut(s)	74, 87, 1866, 1993, 2297
BspMAI	CTGCAG	2 cut(s)	1261, 1822
BspMI	ACCTGC	1 cut(s)	1844
BspOI	GCTAGC	1 cut(s)	1413
BspPI	GGATC	6 cut(s)	16, 1278, 1671, 1859, 1872, 2061
BspT107I	GGYRCC	1 cut(s)	72
BspTI	CTTAAG	1 cut(s)	722
BspTNI	GGTCTC	1 cut(s)	356
BsrFI	RCCGGY	1 cut(s)	75
BsrI	ACTGG	2 cut(s)	1801, 2297
BssAI	RCCGGY	1 cut(s)	75
BssECI	CCNNGG	5 cut(s)	151, 366, 1776, 1965, 1995
BssMI	GATC	8 cut(s)	8, 1270, 1529, 1663, 1684, 1864, 2053, 2362
BssSI	CACGAG	1 cut(s)	304
BssT1I	CCWWGG	1 cut(s)	1776
Bst2BI	CACGAG	1 cut(s)	304
Bst2UI	CCWGG	3 cut(s)	367, 1917, 1967
Bst4CI	ACNGT	8 cut(s)	211, 238, 269, 564, 695, 1005, 2164, 2284
Bst6I	CTCTTC	2 cut(s)	428, 491
BstAFI	CTTAAG	1 cut(s)	722
BstAPI	GCANNNNNTGC	1 cut(s)	635
BstC8I	GCNNGC	4 cut(s)	1298, 1399, 1411, 1648
BstDEI	CTNAG	9 cut(s)	30, 137, 201, 483, 876, 1352, 1945, 2148, 2211
BstDSI	CCRYGG	2 cut(s)	151, 1776
BstENI	CCTNNNNNAGG	1 cut(s)	1179
BstF5I	GGATG	5 cut(s)	507, 640, 780, 1582, 1880
BstFNI	CGCG	5 cut(s)	192, 377, 1460, 1613, 1615
BstHHI	GCGC	5 cut(s)	16, 275, 379, 1460, 1615
BstKTI	GATC	8 cut(s)	11, 1273, 1532, 1666, 1687, 1867, 2056, 2365
BstMAI	GTCTC	2 cut(s)	356, 430
BstMBI	GATC	8 cut(s)	8, 1270, 1529, 1663, 1684, 1864, 2053, 2362
BstMWI	GCNNNNNNNGC	9 cut(s)	353, 356, 635, 1262, 1302, 1363, 1814, 1946, 2096
BstNI	CCWGG	3 cut(s)	367, 1917, 1967
BstNSI	RCATGY	3 cut(s)	1217, 1650, 1744
BstPAI	GACNNNNGTC	1 cut(s)	1719
BstSCI	CCNGG	3 cut(s)	365, 1915, 1965
BstSFI	CTRYAG	3 cut(s)	1257, 1818, 2092
BstSLI	GKGCMC	1 cut(s)	305
BstUI	CGCG	5 cut(s)	192, 377, 1460, 1613, 1615
BstV2I	GAAGAC	1 cut(s)	599
BstX2I	RGATCY	5 cut(s)	1270, 1663, 1684, 1864, 2053
BstXI	CCANNNNNNTGG	1 cut(s)	466
BstYI	RGATCY	5 cut(s)	1270, 1663, 1684, 1864, 2053
Bsu15I	ATCGAT	1 cut(s)	1098
BsuRI	GGCC	4 cut(s)	79, 374, 458, 791
BsuTUI	ATCGAT	1 cut(s)	1098
BtgI	CCRYGG	2 cut(s)	151, 1776
BtrI	CACGTC	1 cut(s)	999
BtsCI	GGATG	5 cut(s)	507, 640, 780, 1582, 1880
BtsIMutI	CAGTG	3 cut(s)	569, 700, 1244
BveI	ACCTGC	1 cut(s)	1844
Cac8I	GCNNGC	4 cut(s)	1298, 1399, 1411, 1648
CaiI	CAGNNNCTG	2 cut(s)	1940, 2282
CfoI	GCGC	5 cut(s)	16, 275, 379, 1460, 1615
Cfr10I	RCCGGY	1 cut(s)	75
Cfr13I	GGNCC	5 cut(s)	86, 686, 1377, 1799, 2296
ClaI	ATCGAT	1 cut(s)	1098
Csp6I	GTAC	4 cut(s)	73, 91, 1072, 1782
CviQI	GTAC	4 cut(s)	73, 91, 1072, 1782
DdeI	CTNAG	9 cut(s)	30, 137, 201, 483, 876, 1352, 1945, 2148, 2211
DpnI	GATC	8 cut(s)	10, 1272, 1531, 1665, 1686, 1866, 2055, 2364
DpnII	GATC	8 cut(s)	8, 1270, 1529, 1663, 1684, 1864, 2053, 2362
Eam1104I	CTCTTC	2 cut(s)	428, 491
EarI	CTCTTC	2 cut(s)	428, 491
Ecl136II	GAGCTC	2 cut(s)	21, 2099
Eco130I	CCWWGG	1 cut(s)	1776
Eco147I	AGGCCT	1 cut(s)	791
Eco24I	GRGCYC	2 cut(s)	23, 2101
Eco31I	GGTCTC	1 cut(s)	356
Eco47I	GGWCC	5 cut(s)	86, 686, 1377, 1799, 2296
Eco53kI	GAGCTC	2 cut(s)	21, 2099
Eco57I	CTGAAG	6 cut(s)	41, 962, 1257, 1308, 1497, 1824
Eco88I	CYCGRG	1 cut(s)	768
EcoICRI	GAGCTC	2 cut(s)	21, 2099
EcoNI	CCTNNNNNAGG	1 cut(s)	1179
EcoO109I	RGGNCCY	1 cut(s)	2296
EcoRI	GAATTC	1 cut(s)	1970
EcoRII	CCWGG	3 cut(s)	365, 1915, 1965
EcoT14I	CCWWGG	1 cut(s)	1776
EcoT22I	ATGCAT	1 cut(s)	1627
EcoT38I	GRGCYC	2 cut(s)	23, 2101
ErhI	CCWWGG	1 cut(s)	1776
FaqI	GGGAC	3 cut(s)	278, 404, 1948
FauI	CCCGC	4 cut(s)	197, 850, 1532, 1608
FauNDI	CATATG	3 cut(s)	813, 847, 1886
FbaI	TGATCA	1 cut(s)	2362
FblI	GTMKAC	1 cut(s)	1793
FokI	GGATG	5 cut(s)	514, 647, 767, 1589, 1867
FriOI	GRGCYC	2 cut(s)	23, 2101
FspBI	CTAG	8 cut(s)	105, 1179, 1266, 1410, 1860, 1958, 2001, 2300
GlaI	GCGC	5 cut(s)	15, 274, 378, 1459, 1614
GsuI	CTGGAG	1 cut(s)	1388
HaeIII	GGCC	4 cut(s)	79, 374, 458, 791
HapII	CCGG	2 cut(s)	35, 76
HhaI	GCGC	5 cut(s)	16, 275, 379, 1460, 1615
Hin6I	GCGC	5 cut(s)	14, 273, 377, 1458, 1613
HinP1I	GCGC	5 cut(s)	14, 273, 377, 1458, 1613
HincII	GTYRAC	3 cut(s)	676, 1570, 2290
HindII	GTYRAC	3 cut(s)	676, 1570, 2290
HpaI	GTTAAC	2 cut(s)	676, 1570
HpaII	CCGG	2 cut(s)	35, 76
HphI	GGTGA	2 cut(s)	223, 1116
Hpy166II	GTNNAC	5 cut(s)	676, 1124, 1570, 1794, 2290
Hpy188I	TCNGA	9 cut(s)	60, 202, 225, 785, 1432, 1534, 1936, 1996, 2214
Hpy8I	GTNNAC	5 cut(s)	676, 1124, 1570, 1794, 2290
HpyAV	CCTTC	7 cut(s)	55, 286, 439, 448, 845, 1185, 1916
HpyCH4III	ACNGT	8 cut(s)	211, 238, 269, 564, 695, 1005, 2164, 2284
HpyCH4IV	ACGT	2 cut(s)	604, 998
HpyF10VI	GCNNNNNNNGC	9 cut(s)	353, 356, 635, 1262, 1302, 1363, 1814, 1946, 2096
HpyF3I	CTNAG	9 cut(s)	30, 137, 201, 483, 876, 1352, 1945, 2148, 2211
HpySE526I	ACGT	2 cut(s)	604, 998
HspAI	GCGC	5 cut(s)	14, 273, 377, 1458, 1613
KpnI	GGTACC	1 cut(s)	76
Ksp22I	TGATCA	1 cut(s)	2362
KspAI	GTTAAC	2 cut(s)	676, 1570
Kzo9I	GATC	8 cut(s)	8, 1270, 1529, 1663, 1684, 1864, 2053, 2362
LmnI	GCTCC	3 cut(s)	2266, 2352, 2368
LweI	GCATC	9 cut(s)	492, 625, 1045, 1159, 1231, 1567, 1634, 1927, 1958
MaeI	CTAG	8 cut(s)	105, 1179, 1266, 1410, 1860, 1958, 2001, 2300
MaeII	ACGT	2 cut(s)	604, 998
MaeIII	GTNAC	1 cut(s)	999
MalI	GATC	8 cut(s)	10, 1272, 1531, 1665, 1686, 1866, 2055, 2364
MboI	GATC	8 cut(s)	8, 1270, 1529, 1663, 1684, 1864, 2053, 2362
MfeI	CAATTG	1 cut(s)	971
MflI	RGATCY	5 cut(s)	1270, 1663, 1684, 1864, 2053
MhlI	GDGCHC	5 cut(s)	23, 305, 2101, 2212, 2373
MlyI	GAGTC	4 cut(s)	125, 1514, 1781, 1970
MmeI	TCCRAC	3 cut(s)	447, 525, 1989
Mph1103I	ATGCAT	1 cut(s)	1627
MroXI	GAANNNNTTC	1 cut(s)	825
MslI	CAYNNNNRTG	3 cut(s)	246, 1885, 2334
MspA1I	CMGCKG	1 cut(s)	1583
MspCI	CTTAAG	1 cut(s)	722
MspI	CCGG	2 cut(s)	35, 76
MspR9I	CCNGG	3 cut(s)	367, 1917, 1967
MunI	CAATTG	1 cut(s)	971
MvaI	CCWGG	3 cut(s)	367, 1917, 1967
MvnI	CGCG	5 cut(s)	192, 377, 1460, 1613, 1615
MwoI	GCNNNNNNNGC	9 cut(s)	353, 356, 635, 1262, 1302, 1363, 1814, 1946, 2096
NcoI	CCATGG	1 cut(s)	1776
NdeI	CATATG	3 cut(s)	813, 847, 1886
NdeII	GATC	8 cut(s)	8, 1270, 1529, 1663, 1684, 1864, 2053, 2362
NheI	GCTAGC	1 cut(s)	1409
NlaIV	GGNNCC	5 cut(s)	74, 87, 1866, 1993, 2297
NmuCI	GTSAC	1 cut(s)	999
NsiI	ATGCAT	1 cut(s)	1627
NspI	RCATGY	3 cut(s)	1217, 1650, 1744
PaeI	GCATGC	1 cut(s)	1650
PaqCI	CACCTGC	1 cut(s)	1844
PceI	AGGCCT	1 cut(s)	791
PciI	ACATGT	1 cut(s)	1213
PdmI	GAANNNNTTC	1 cut(s)	825
PfeI	GAWTC	6 cut(s)	656, 797, 871, 961, 1481, 1594
PflFI	GACNNNGTC	1 cut(s)	2294
PleI	GAGTC	4 cut(s)	125, 1514, 1780, 1969
PpsI	GAGTC	4 cut(s)	125, 1514, 1780, 1969
PpuMI	RGGWCCY	1 cut(s)	2296
PscI	ACATGT	1 cut(s)	1213
PshAI	GACNNNNGTC	1 cut(s)	1719
PsiI	TTATAA	1 cut(s)	1289
Psp124BI	GAGCTC	2 cut(s)	23, 2101
Psp5II	RGGWCCY	1 cut(s)	2296
Psp6I	CCWGG	3 cut(s)	365, 1915, 1965
PspGI	CCWGG	3 cut(s)	365, 1915, 1965
PspN4I	GGNNCC	5 cut(s)	74, 87, 1866, 1993, 2297
PspPI	GGNCC	5 cut(s)	86, 686, 1377, 1799, 2296
PspPPI	RGGWCCY	1 cut(s)	2296
PstI	CTGCAG	2 cut(s)	1261, 1822
PstNI	CAGNNNCTG	2 cut(s)	1940, 2282
PsuI	RGATCY	5 cut(s)	1270, 1663, 1684, 1864, 2053
PsyI	GACNNNGTC	1 cut(s)	2294
RsaI	GTAC	4 cut(s)	74, 92, 1073, 1783
RsaNI	GTAC	4 cut(s)	73, 91, 1072, 1782
RseI	CAYNNNNRTG	3 cut(s)	246, 1885, 2334
SacI	GAGCTC	2 cut(s)	23, 2101
Sau3AI	GATC	8 cut(s)	8, 1270, 1529, 1663, 1684, 1864, 2053, 2362
Sau96I	GGNCC	5 cut(s)	86, 686, 1377, 1799, 2296
SchI	GAGTC	4 cut(s)	125, 1514, 1781, 1970
ScrFI	CCNGG	3 cut(s)	367, 1917, 1967
SduI	GDGCHC	5 cut(s)	23, 305, 2101, 2212, 2373
SfaNI	GCATC	9 cut(s)	492, 625, 1045, 1159, 1231, 1567, 1634, 1927, 1958
SfcI	CTRYAG	3 cut(s)	1257, 1818, 2092
SinI	GGWCC	5 cut(s)	86, 686, 1377, 1799, 2296
SmiMI	CAYNNNNRTG	3 cut(s)	246, 1885, 2334
SmlI	CTYRAG	3 cut(s)	722, 1361, 1402
SmoI	CTYRAG	3 cut(s)	722, 1361, 1402
SphI	GCATGC	1 cut(s)	1650
SseBI	AGGCCT	1 cut(s)	791
SspI	AATATT	1 cut(s)	220
SspMI	CTAG	8 cut(s)	105, 1179, 1266, 1410, 1860, 1958, 2001, 2300
SstI	GAGCTC	2 cut(s)	23, 2101
StuI	AGGCCT	1 cut(s)	791
StyD4I	CCNGG	3 cut(s)	365, 1915, 1965
StyI	CCWWGG	1 cut(s)	1776
TaaI	ACNGT	8 cut(s)	211, 238, 269, 564, 695, 1005, 2164, 2284
TaiI	ACGT	2 cut(s)	607, 1001
TaqI	TCGA	5 cut(s)	129, 476, 759, 1098, 2304
TauI	GCSGC	5 cut(s)	29, 255, 359, 377, 1583
TfiI	GAWTC	6 cut(s)	656, 797, 871, 961, 1481, 1594
TscAI	CASTG	3 cut(s)	569, 700, 1251
TseFI	GTSAC	1 cut(s)	999
Tsp45I	GTSAC	1 cut(s)	999
TspGWI	ACGGA	2 cut(s)	78, 508
TspRI	CASTG	3 cut(s)	569, 700, 1251
Tth111I	GACNNNGTC	1 cut(s)	2294
Vha464I	CTTAAG	1 cut(s)	722
VpaK11BI	GGWCC	5 cut(s)	86, 686, 1377, 1799, 2296
XagI	CCTNNNNNAGG	1 cut(s)	1179
XapI	RAATTY	4 cut(s)	175, 825, 1514, 1970
XbaI	TCTAGA	1 cut(s)	1178
XceI	RCATGY	3 cut(s)	1217, 1650, 1744
XmiI	GTMKAC	1 cut(s)	1793
XmnI	GAANNNNTTC	1 cut(s)	825
XspI	CTAG	8 cut(s)	105, 1179, 1266, 1410, 1860, 1958, 2001, 2300
Zsp2I	ATGCAT	1 cut(s)	1627

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.