AT5G48740

LRR receptor-like serine threonine-protein kinase At5g48740

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0010915
Physical Location & Seq
Reverse (-)
19765195 .. 19769369
4175 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G48740.1

Sequence Viewer

Length: 2688 bp
ATGCTCTTTTGGGTTTTGCTCAGTAGTTTCTGTGTGTTTTGTTTCTCCAGTCCAGATGGTTTCTTGAGCTTATCATGTGGCGGCTCAAGTTACACCGCTGCTTATAACATCTCATGGGTTTCAGACAACGATTATATCGAAACAGGTAACACTACCACGGTTACTTACGCCGAGGGGAATTCTACTTCCAGTGTTCCCATCAGATTATTCCCGGATCCTCAAGGTCGCCAATGTTACAAGTTACCTGTGAGGAAAGACTTGTCTTCAGTTCTGATTCGTGCTACATTCGTTTATAGAAACTATGATAGCCAGAATAGTCCTCCAGCATTTCATGTCTCTCTTGGAAGGAGAATCACTAGTACTGTTGATCTTAGAACCAATGATCCTTGGATTGAAGAGTTAGTTTGGCCAGTCAACAATGATTCTCTTTTGCTTTGCTTGCTTGCGGTTAAAGGAAGAGGTATTCCGGTTATCTCTTCTCTAGAAGTACGGCCACTTCCTTTAGGTTCTTACAAATACAGCCTGGAGGGTTCACCAGATATAATTCTCAGGAGAAGTTACCGAATCAATAGCGGATACACAAATGGGACTATCCGGTATCCTTCAGATCCATTTGATCGAATATGGGATCCGGATCAAAGTTATTCACCGTTTCACGCCTCTTGGAGCTTCAATGGACTCACAAAATTGAATTCCTTCAATATTACTGAGAATCCACCAGCTTCTGTTCTTAAGACAGCAAGAATTCTTGCTCGCAAAGAAAGTCTTTCATATACTCTTTCTCTACATACACCAGGGGACTACTACATTATCCTCTACTTTGCTGGGATACTCTCACTCTCCCCTTCTTTTAGTGTGACGATCAATGATGAAGTCAAACAATCTGATTACACCGTAACTAGCTCAGAAGCTGGTACCTTGTACTTTACGCAAAAAGGAATCAGTAAGTTAAACATCACCCTCAGAAAAATCAAGTTCAATCCTCAAGTGAGTGCTCTTGAGGTATATGAAATCCTCCAAATCCCTCCTGAAGCTTCTTCTACCACAGTTTCGGCACTTAAAGTCATAGAGCAATTTACCGGGCAAGACCTTGGATGGCAAGACGACCCATGCACACCGCTTCCTTGGAACCACATCGAATGTGAAGGAAACCGTGTTACATCATTGTTCCTTTCAAAAATCAACCTGAGGTCCATTAGTCCAACATTCGGAGACTTGCTCGATCTCAAAACACTCGACTTGCATAATACATCACTTACAGGAGCAATACAGAATGTAGGCAGCCTTAAGGATCTCCAGAAACTGAATTTGAGCTTCAATCAGTTAGAATCTTTTGGCTCCGAGCTGGAAGATCTGGTTAACCTTGAAGTTCTGGACCTGCAAAACAACAGCTTACAAGGATCAGTTCCTGAAACATTAGGAAAGCTGAAGAAACTTCGTCTCCTGAATCTGGAAAACAATAACTTAGTAGGTCCCTTGCCACAGTCTCTTAACATAACGGGTCTGGAAGTCAGGATAACGGGAAATCCATGCCTTTCGTTCTCTTCAATATCATGCAACAATGTGTCTTCAACAATTGACACACCACAAGTCACTATCCCTATCAATAAGAAACAAAGAAAACAGAACCGTATAGCGATCTTGCTTGGAGTTTCTGGTGGAGCCTTGTTTGCCACCTTTCTTGTCTTTGTTTTCATGTCGATCTTCACGAGGAGACAGAGAAACAAAGAGAGAGATATAACCAGAGCACAACTGAAAATGCAGAACTGGAACGCTTCAAGAATCTTTTCTCACAAAGAGATCAAGTCAGCTACTAGAAATTTCAAGGAAGTGATTGGTCGTGGAAGTTTTGGAGCTGTATACCGTGGAAAACTACCAGATGGAAAACAAGTTGCGGTCAAAGTGCGATTTGATAGAACTCAACTTGGAGCTGATTCTTTCATCAATGAGGTGCACCTTTTGTCTCAGATCCGCCACCAAAATCTAGTTTCATTTGAGGGCTTCTGCTATGAACCAAAACGTCAAATACTGGTGTATGAGTATCTGTCTGGTGGATCCTTAGCTGATCACCTTTACGGTCCACGTAGCAAAAGGCATTCATTGAACTGGGTTTCAAGACTAAAAGTTGCTGTTGATGCTGCAAAAGGATTGGACTACCTGCATAATGGAAGTGAGCCGAGAATTATACATCGGGATGTAAAGAGCAGTAACATACTTTTAGACAAGGATATGAACGCGAAAGTTTCTGATTTTGGCCTGTCAAAACAATTTACAAAAGCAGATGCATCTCATATTACTACTGTTGTTAAAGGCACCGCAGGCTACCTTGACCCCGAATATTACTCTACCCTGCAGCTGACAGAGAAAAGTGATGTCTATAGCTTTGGTGTGGTTCTGTTGGAGCTTATCTGTGGAAGAGAACCCTTAAGTCACTCAGGATCACCAGATTCGTTTAACTTGGTCTTATGGGCTAGGCCAAACTTACAAGCAGGAGCTTTTGAGATTGTGGATGATATCTTGAAGGAGACATTTGATCCAGCGAGCATGAAAAAAGCTGCTTCGATTGCTATAAGATGTGTGGGAAGAGATGCATCTGGAAGACCGTCTATCGCCGAAGTTTTGACTAAACTGAAAGAAGCGTACAGTCTTCAACTCTCATATCTAGCTGCTTCAGCACATACAGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

895

Amino Acids

99.61

Weight (kDa)

8.65

Isoelectric Point (pI)

41.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 24 - 337 1.1e-54 Malectin-like domain
LRR_14 PF23598 399 - 487 5.7e-06 Leucine-rich repeat region
LRR_8 PF13855 432 - 489 5.8e-08 Leucine rich repeat
LRR_4 PF12799 454 - 493 8.7e-06 Leucine Rich repeats (2 copies)
PK_Tyr_Ser-Thr PF07714 608 - 876 4.3e-47 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 608 - 875 1.5e-46 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0010915)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48740
fragaria_vesca FvH4_2g19020 FvH4_2g19020 FvH4_2g19020 FvH4_2g19020
malus_domestica MD10G1164000.v1.1
prunus_persica Prupe.8G202400_v2.0.a1 Prupe.8G202400_v2.0.a1 Prupe.8G202400_v2.0.a1
pyrus_communis pycom10g14140
rosa_chinensis RchiOBHm_Chr6g0284821
rosa_laevigata RLG00000012713
rosa_multiflora Rmu_sc0000686.1_g000012
rosa_roxburghii Rroxscaffold_7G00184340
rosa_rugosa Rorug06G0167200
rosa_samantha Rh6AG279900 Rh6BG279900 Rh6CG282100 Rh6DG275000
rosa_wichuraiana Rw6G024060

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 105
Acc36I ACCTGC 2 cut(s) 1386, 2166
Acc65I GGTACC 1 cut(s) 914
AccB1I GGYRCC 2 cut(s) 914, 2312
AccI GTMKAC 1 cut(s) 1860
AccII CGCG 1 cut(s) 2237
AccIII TCCGGA 1 cut(s) 631
AciI CCGC 8 cut(s) 81, 96, 446, 573, 1118, 1895, 1972, 2316
AcoI YGGCCR 2 cut(s) 407, 491
AcsI RAATTY 5 cut(s) 178, 691, 744, 1306, 1819
AcuI CTGAAG 5 cut(s) 249, 588, 1050, 1448, 2655
AfaI GTAC 5 cut(s) 361, 489, 916, 923, 2642
AfiI CCNNNNNNNGG 2 cut(s) 1208, 1450
AflII CTTAAG 3 cut(s) 731, 1286, 2425
AhlI ACTAGT 1 cut(s) 356
AjnI CCWGG 2 cut(s) 522, 793
AloI GAACNNNNNNTCC 2 cut(s) 367, 399
Alw21I GWGCWC 3 cut(s) 997, 1750, 1956
Alw26I GTCTC 7 cut(s) 340, 1206, 1445, 1491, 1708, 1968, 2519
Alw44I GTGCAC 1 cut(s) 1952
AlwNI CAGNNNCTG 4 cut(s) 725, 911, 1303, 1409
Aor13HI TCCGGA 1 cut(s) 631
AoxI GGCC 4 cut(s) 407, 491, 2254, 2474
ApaLI GTGCAC 1 cut(s) 1952
ApeKI GCWGC 6 cut(s) 98, 1281, 2138, 2353, 2555, 2666
ApoI RAATTY 5 cut(s) 178, 691, 744, 1306, 1819
Asp700I GAANNNNTTC 2 cut(s) 695, 1786
Asp718I GGTACC 1 cut(s) 914
AspS9I GGNCC 4 cut(s) 1191, 1375, 1472, 2078
AsuC2I CCSGG 2 cut(s) 212, 1081
AsuHPI GGTGA 5 cut(s) 525, 639, 949, 2060, 2433
AvaII GGWCC 4 cut(s) 1191, 1375, 1472, 2078
AxyI CCTNAGG 1 cut(s) 1187
BaeGI GKGCMC 1 cut(s) 1956
BalI TGGCCA 1 cut(s) 409
BamHI GGATCC 3 cut(s) 214, 628, 2054
BanI GGYRCC 2 cut(s) 914, 2312
BarI GAAGNNNNNNTAC 2 cut(s) 480, 512
BauI CACGAG 1 cut(s) 1708
BbsI GAAGAC 4 cut(s) 255, 1560, 2605, 2639
Bbv12I GWGCWC 3 cut(s) 997, 1750, 1956
BbvI GCAGC 6 cut(s) 85, 1293, 2125, 2365, 2542, 2653
BccI CCATC 4 cut(s) 50, 206, 1089, 1874
BceAI ACGGC 1 cut(s) 506
BciT130I CCWGG 2 cut(s) 524, 795
BciVI GTATCC 3 cut(s) 569, 609, 822
BclI TGATCA 1 cut(s) 2065
BcnI CCSGG 2 cut(s) 212, 1081
BcoDI GTCTC 7 cut(s) 340, 1206, 1445, 1491, 1708, 1968, 2519
BcuI ACTAGT 1 cut(s) 356
BfaI CTAG 7 cut(s) 357, 482, 900, 1815, 1985, 2472, 2663
BfmI CTRYAG 2 cut(s) 2351, 2377
BfrI CTTAAG 3 cut(s) 731, 1286, 2425
BfuAI ACCTGC 2 cut(s) 1386, 2166
BfuI GTATCC 3 cut(s) 569, 609, 822
BglII AGATCT 1 cut(s) 1351
BisI GCNGC 7 cut(s) 82, 99, 1282, 2139, 2354, 2556, 2667
BlsI GCNGC 7 cut(s) 83, 100, 1283, 2140, 2355, 2557, 2668
BmcAI AGTACT 1 cut(s) 361
Bme1390I CCNGG 4 cut(s) 212, 524, 795, 1081
Bme18I GGWCC 4 cut(s) 1191, 1375, 1472, 2078
BmgT120I GGNCC 4 cut(s) 1191, 1375, 1472, 2078
BmiI GGNNCC 9 cut(s) 216, 630, 916, 1130, 1339, 1474, 1663, 2056, 2314
BmrFI CCNGG 4 cut(s) 212, 524, 795, 1081
BmrI ACTGGG 1 cut(s) 2116
BmsI GCATC 5 cut(s) 2125, 2272, 2294, 2578, 2600
BmuI ACTGGG 1 cut(s) 2116
BpiI GAAGAC 4 cut(s) 255, 1560, 2605, 2639
BplI GAGNNNNNCTC 2 cut(s) 1203, 1235
BpmI CTGGAG 4 cut(s) 31, 306, 545, 1280
Bpu10I CCTNAGC 1 cut(s) 2059
BpuEI CTTGAG 5 cut(s) 70, 85, 204, 969, 1019
BpuMI CCSGG 2 cut(s) 212, 1081
BsaAI YACGTR 1 cut(s) 2084
BsaBI GATNNNNATC 1 cut(s) 633
BsaJI CCNNGG 7 cut(s) 156, 171, 386, 794, 1090, 1124, 1864
BsaWI WCCGGW 3 cut(s) 466, 594, 631
BsaXI ACNNNNNCTCC 2 cut(s) 1425, 1455
Bsc4I CCNNNNNNNGG 2 cut(s) 1208, 1450
Bse1I ACTGG 6 cut(s) 48, 189, 410, 1772, 2034, 2111
Bse21I CCTNAGG 1 cut(s) 1187
Bse8I GATNNNNATC 1 cut(s) 633
BseAI TCCGGA 1 cut(s) 631
BseBI CCWGG 2 cut(s) 524, 795
BseDI CCNNGG 7 cut(s) 156, 171, 386, 794, 1090, 1124, 1864
BseGI GGATG 3 cut(s) 1100, 2200, 2515
BseJI GATNNNNATC 1 cut(s) 633
BseLI CCNNNNNNNGG 2 cut(s) 1208, 1450
BseMII CTCAG 8 cut(s) 34, 562, 699, 918, 976, 1178, 1979, 2448
BseNI ACTGG 6 cut(s) 48, 189, 410, 1772, 2034, 2111
BseRI GAGGAG 1 cut(s) 1726
BseSI GKGCMC 1 cut(s) 1956
BseXI GCAGC 6 cut(s) 85, 1293, 2125, 2365, 2542, 2653
BseYI CCCAGC 1 cut(s) 824
Bsh1236I CGCG 1 cut(s) 2237
BshFI GGCC 4 cut(s) 409, 493, 2256, 2476
BshNI GGYRCC 2 cut(s) 914, 2312
BsiHKAI GWGCWC 3 cut(s) 997, 1750, 1956
BsiSI CCGG 5 cut(s) 212, 467, 595, 632, 1080
BslFI GGGAC 3 cut(s) 601, 812, 1458
BslI CCNNNNNNNGG 2 cut(s) 1208, 1450
BsmAI GTCTC 7 cut(s) 340, 1206, 1445, 1491, 1708, 1968, 2519
BsmBI CGTCTC 1 cut(s) 1445
BsmFI GGGAC 3 cut(s) 601, 812, 1458
BsmI GAATGC 1 cut(s) 2095
BsnI GGCC 4 cut(s) 409, 493, 2256, 2476
Bsp1286I GDGCHC 3 cut(s) 997, 1750, 1956
Bsp13I TCCGGA 1 cut(s) 631
BspACI CCGC 8 cut(s) 81, 96, 446, 573, 1118, 1895, 1972, 2316
BspANI GGCC 4 cut(s) 409, 493, 2256, 2476
BspCNI CTCAG 8 cut(s) 33, 561, 700, 917, 975, 1179, 1978, 2447
BspEI TCCGGA 1 cut(s) 631
BspFNI CGCG 1 cut(s) 2237
BspLI GGNNCC 9 cut(s) 216, 630, 916, 1130, 1339, 1474, 1663, 2056, 2314
BspMAI CTGCAG 1 cut(s) 2355
BspMI ACCTGC 2 cut(s) 1386, 2166
BspT107I GGYRCC 2 cut(s) 914, 2312
BspTI CTTAAG 3 cut(s) 731, 1286, 2425
BsrI ACTGG 6 cut(s) 48, 189, 410, 1772, 2034, 2111
BssECI CCNNGG 7 cut(s) 156, 171, 386, 794, 1090, 1124, 1864
BssNAI GTATAC 1 cut(s) 1861
BssSI CACGAG 1 cut(s) 1708
BssT1I CCWWGG 3 cut(s) 386, 1090, 1124
Bst1107I GTATAC 1 cut(s) 1861
Bst2BI CACGAG 1 cut(s) 1708
Bst2UI CCWGG 2 cut(s) 524, 795
Bst6I CTCTTC 6 cut(s) 390, 451, 481, 1549, 2410, 2578
BstAFI CTTAAG 3 cut(s) 731, 1286, 2425
BstBAI YACGTR 1 cut(s) 2084
BstC8I GCNNGC 5 cut(s) 440, 444, 754, 2320, 2542
BstDSI CCRYGG 2 cut(s) 156, 1864
BstF5I GGATG 3 cut(s) 1100, 2200, 2515
BstFNI CGCG 1 cut(s) 2237
BstMAI GTCTC 7 cut(s) 340, 1206, 1445, 1491, 1708, 1968, 2519
BstMWI GCNNNNNNNGC 6 cut(s) 439, 1670, 2135, 2319, 2564, 2672
BstNI CCWGG 2 cut(s) 524, 795
BstSCI CCNGG 4 cut(s) 210, 522, 793, 1079
BstSFI CTRYAG 2 cut(s) 2351, 2377
BstSLI GKGCMC 1 cut(s) 1956
BstUI CGCG 1 cut(s) 2237
BstV1I GCAGC 6 cut(s) 85, 1293, 2125, 2365, 2542, 2653
BstV2I GAAGAC 4 cut(s) 255, 1560, 2605, 2639
BstX2I RGATCY 7 cut(s) 214, 607, 628, 1291, 1351, 1968, 2054
BstYI RGATCY 7 cut(s) 214, 607, 628, 1291, 1351, 1968, 2054
BstZ17I GTATAC 1 cut(s) 1861
Bsu36I CCTNAGG 1 cut(s) 1187
BsuI GTATCC 3 cut(s) 569, 609, 822
BsuRI GGCC 4 cut(s) 409, 493, 2256, 2476
BtgI CCRYGG 2 cut(s) 156, 1864
BtsCI GGATG 3 cut(s) 1100, 2200, 2515
BtsIMutI CAGTG 1 cut(s) 196
BveI ACCTGC 2 cut(s) 1386, 2166
Cac8I GCNNGC 5 cut(s) 440, 444, 754, 2320, 2542
CaiI CAGNNNCTG 4 cut(s) 725, 911, 1303, 1409
Cfr13I GGNCC 4 cut(s) 1191, 1375, 1472, 2078
Csp6I GTAC 5 cut(s) 360, 488, 915, 922, 2641
CspCI CAANNNNNGTGG 2 cut(s) 1663, 1698
CviAII CATG 8 cut(s) 75, 114, 332, 1110, 1530, 1554, 1696, 2545
CviQI GTAC 5 cut(s) 360, 488, 915, 922, 2641
EaeI YGGCCR 2 cut(s) 407, 491
Eam1104I CTCTTC 6 cut(s) 390, 451, 481, 1549, 2410, 2578
EarI CTCTTC 6 cut(s) 390, 451, 481, 1549, 2410, 2578
EciI GGCGGA 1 cut(s) 1961
Eco130I CCWWGG 3 cut(s) 386, 1090, 1124
Eco32I GATATC 1 cut(s) 2515
Eco47I GGWCC 4 cut(s) 1191, 1375, 1472, 2078
Eco57I CTGAAG 5 cut(s) 249, 588, 1050, 1448, 2655
Eco81I CCTNAGG 1 cut(s) 1187
EcoO109I RGGNCCY 1 cut(s) 1472
EcoRI GAATTC 3 cut(s) 178, 691, 744
EcoRII CCWGG 2 cut(s) 522, 793
EcoRV GATATC 1 cut(s) 2515
EcoT14I CCWWGG 3 cut(s) 386, 1090, 1124
EcoT22I ATGCAT 2 cut(s) 2287, 2593
ErhI CCWWGG 3 cut(s) 386, 1090, 1124
Esp3I CGTCTC 1 cut(s) 1445
FaeI CATG 8 cut(s) 78, 117, 335, 1113, 1533, 1557, 1699, 2548
FalI AAGNNNNNCTT 2 cut(s) 750, 782
FaqI GGGAC 3 cut(s) 601, 812, 1458
FatI CATG 8 cut(s) 74, 113, 331, 1109, 1529, 1553, 1695, 2544
FbaI TGATCA 1 cut(s) 2065
FblI GTMKAC 1 cut(s) 1860
Fnu4HI GCNGC 7 cut(s) 82, 99, 1282, 2139, 2354, 2556, 2667
FokI GGATG 3 cut(s) 1107, 2207, 2522
Fsp4HI GCNGC 7 cut(s) 82, 99, 1282, 2139, 2354, 2556, 2667
FspBI CTAG 7 cut(s) 357, 482, 900, 1815, 1985, 2472, 2663
GluI GCNGC 7 cut(s) 82, 99, 1282, 2139, 2354, 2556, 2667
GsaI CCCAGC 1 cut(s) 828
GsuI CTGGAG 4 cut(s) 31, 306, 545, 1280
HaeIII GGCC 4 cut(s) 409, 493, 2256, 2476
HapII CCGG 5 cut(s) 212, 467, 595, 632, 1080
Hin1II CATG 8 cut(s) 78, 117, 335, 1113, 1533, 1557, 1699, 2548
HincII GTYRAC 2 cut(s) 415, 1360
HindII GTYRAC 2 cut(s) 415, 1360
HindIII AAGCTT 1 cut(s) 1032
HpaI GTTAAC 1 cut(s) 1360
HpaII CCGG 5 cut(s) 212, 467, 595, 632, 1080
HphI GGTGA 5 cut(s) 525, 639, 949, 2060, 2433
Hpy166II GTNNAC 6 cut(s) 415, 533, 1360, 1861, 1954, 2081
Hpy8I GTNNAC 6 cut(s) 415, 533, 1360, 1861, 1954, 2081
HpyAV CCTTC 6 cut(s) 339, 612, 706, 855, 1139, 2515
HpyCH4IV ACGT 2 cut(s) 2020, 2083
HpyF10VI GCNNNNNNNGC 6 cut(s) 439, 1670, 2135, 2319, 2564, 2672
HpySE526I ACGT 2 cut(s) 2020, 2083
Hsp92II CATG 8 cut(s) 78, 117, 335, 1113, 1533, 1557, 1699, 2548
Kpn2I TCCGGA 1 cut(s) 631
KpnI GGTACC 1 cut(s) 918
Ksp22I TGATCA 1 cut(s) 2065
KspAI GTTAAC 1 cut(s) 1360
LmnI GCTCC 8 cut(s) 666, 1262, 1343, 1661, 1853, 1928, 2401, 2492
Lsp1109I GCAGC 6 cut(s) 85, 1293, 2125, 2365, 2542, 2653
LweI GCATC 5 cut(s) 2125, 2272, 2294, 2578, 2600
MaeI CTAG 7 cut(s) 357, 482, 900, 1815, 1985, 2472, 2663
MaeII ACGT 2 cut(s) 2020, 2083
MfeI CAATTG 1 cut(s) 1575
MflI RGATCY 7 cut(s) 214, 607, 628, 1291, 1351, 1968, 2054
MhlI GDGCHC 3 cut(s) 997, 1750, 1956
MlsI TGGCCA 1 cut(s) 409
MluNI TGGCCA 1 cut(s) 409
MlyI GAGTC 1 cut(s) 672
MmeI TCCRAC 2 cut(s) 1226, 2379
Mox20I TGGCCA 1 cut(s) 409
Mph1103I ATGCAT 2 cut(s) 2287, 2593
MroI TCCGGA 1 cut(s) 631
MroXI GAANNNNTTC 2 cut(s) 695, 1786
MscI TGGCCA 1 cut(s) 409
MslI CAYNNNNRTG 1 cut(s) 2193
Msp20I TGGCCA 1 cut(s) 409
MspA1I CMGCKG 2 cut(s) 98, 2356
MspCI CTTAAG 3 cut(s) 731, 1286, 2425
MspI CCGG 5 cut(s) 212, 467, 595, 632, 1080
MspR9I CCNGG 4 cut(s) 212, 524, 795, 1081
MunI CAATTG 1 cut(s) 1575
Mva1269I GAATGC 1 cut(s) 2095
MvaI CCWGG 2 cut(s) 524, 795
MvnI CGCG 1 cut(s) 2237
MwoI GCNNNNNNNGC 6 cut(s) 439, 1670, 2135, 2319, 2564, 2672
NciI CCSGG 2 cut(s) 212, 1081
NlaIII CATG 8 cut(s) 78, 117, 335, 1113, 1533, 1557, 1699, 2548
NlaIV GGNNCC 9 cut(s) 216, 630, 916, 1130, 1339, 1474, 1663, 2056, 2314
NmeAIII GCCGAG 2 cut(s) 196, 2202
NmuCI GTSAC 3 cut(s) 856, 1591, 2429
NsiI ATGCAT 2 cut(s) 2287, 2593
PcsI WCGNNNNNNNCGW 2 cut(s) 135, 1706
PctI GAATGC 1 cut(s) 2095
PdmI GAANNNNTTC 2 cut(s) 695, 1786
PfoI TCCNGGA 1 cut(s) 210
PkrI GCNGC 7 cut(s) 83, 100, 1283, 2140, 2355, 2557, 2668
PleI GAGTC 1 cut(s) 672
PpsI GAGTC 1 cut(s) 672
Ppu21I YACGTR 1 cut(s) 2084
PpuMI RGGWCCY 1 cut(s) 1472
PsiI TTATAA 1 cut(s) 105
Psp5II RGGWCCY 1 cut(s) 1472
Psp6I CCWGG 2 cut(s) 522, 793
PspFI CCCAGC 1 cut(s) 824
PspGI CCWGG 2 cut(s) 522, 793
PspN4I GGNNCC 9 cut(s) 216, 630, 916, 1130, 1339, 1474, 1663, 2056, 2314
PspPI GGNCC 4 cut(s) 1191, 1375, 1472, 2078
PspPPI RGGWCCY 1 cut(s) 1472
PstI CTGCAG 1 cut(s) 2355
PstNI CAGNNNCTG 4 cut(s) 725, 911, 1303, 1409
PsuI RGATCY 7 cut(s) 214, 607, 628, 1291, 1351, 1968, 2054
PvuII CAGCTG 1 cut(s) 2356
RsaI GTAC 5 cut(s) 361, 489, 916, 923, 2642
RsaNI GTAC 5 cut(s) 360, 488, 915, 922, 2641
RseI CAYNNNNRTG 1 cut(s) 2193
SatI GCNGC 7 cut(s) 82, 99, 1282, 2139, 2354, 2556, 2667
Sau96I GGNCC 4 cut(s) 1191, 1375, 1472, 2078
ScaI AGTACT 1 cut(s) 361
SchI GAGTC 1 cut(s) 672
ScrFI CCNGG 4 cut(s) 212, 524, 795, 1081
SduI GDGCHC 3 cut(s) 997, 1750, 1956
SfaNI GCATC 5 cut(s) 2125, 2272, 2294, 2578, 2600
SfcI CTRYAG 2 cut(s) 2351, 2377
SinI GGWCC 4 cut(s) 1191, 1375, 1472, 2078
SmiMI CAYNNNNRTG 1 cut(s) 2193
SmlI CTYRAG 8 cut(s) 64, 85, 219, 731, 984, 998, 1286, 2425
SmoI CTYRAG 8 cut(s) 64, 85, 219, 731, 984, 998, 1286, 2425
SpeI ACTAGT 1 cut(s) 356
SsiI CCGC 8 cut(s) 81, 96, 446, 573, 1118, 1895, 1972, 2316
SspI AATATT 2 cut(s) 703, 2339
SspMI CTAG 7 cut(s) 357, 482, 900, 1815, 1985, 2472, 2663
StyD4I CCNGG 4 cut(s) 210, 522, 793, 1079
StyI CCWWGG 3 cut(s) 386, 1090, 1124
TaiI ACGT 2 cut(s) 2023, 2086
TaqI TCGA 7 cut(s) 138, 619, 1137, 1221, 1236, 1700, 2561
TatI WGTACW 2 cut(s) 359, 921
TauI GCSGC 1 cut(s) 84
TscAI CASTG 1 cut(s) 196
TseFI GTSAC 3 cut(s) 856, 1591, 2429
TseI GCWGC 6 cut(s) 98, 1281, 2138, 2353, 2555, 2666
Tsp45I GTSAC 3 cut(s) 856, 1591, 2429
TspRI CASTG 1 cut(s) 196
Vha464I CTTAAG 3 cut(s) 731, 1286, 2425
VneI GTGCAC 1 cut(s) 1952
VpaK11BI GGWCC 4 cut(s) 1191, 1375, 1472, 2078
XapI RAATTY 5 cut(s) 178, 691, 744, 1306, 1819
XbaI TCTAGA 1 cut(s) 481
XmiI GTMKAC 1 cut(s) 1860
XmnI GAANNNNTTC 2 cut(s) 695, 1786
XspI CTAG 7 cut(s) 357, 482, 900, 1815, 1985, 2472, 2663
ZrmI AGTACT 1 cut(s) 361
Zsp2I ATGCAT 2 cut(s) 2287, 2593
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.