Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008568

Physical Location & Seq

Genomic Coordinates Forward (+)

20054501 .. 20058555

Gene Structure 4055 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G49460.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1827 bp

ATGGCAACGGGACAGCTTTTTTCTCGTACCACACAAGCTTTGTTCTACAACTATAAGCAGCTTCCTGTTCAACGAATGCTCGATTTCGACTTTCTCTGTGGACGTGAAACGCCTTCTGTTGCTGGAATCATAAATCCTGGTTCTGAAGGTTTTCAAAAGCTCTTTTTCGGGCAGGAGGAAATCGCTATCCCTGTTCATGCCGCCATTGAGGCAGCTTGTGCTGCGCATCCAACAGCGGATGTATTCATCAACTTTGCATCTTTTAGGAGTGCTGCTGCTTCATCCATGGCTGCTTTGAAGCAGCCGACTATTAAAGTTGTGGCAATTATAGCTGAAGGTGTTCCAGAATCAGACACTAAGCAGCTGATTGCGTATGCTCGTGCAAACAATAAGGTTGTTATTGGACCGGCTACTGTTGGAGGTATTCAAGCTGGAGCCTTTAAGATTGGTGATACTGCAGGAACAATTGATAACATTATCCAGTGCAAGCTATACAGACCTGGATCTGTTGGTTTTGTCTCCAAATCTGGTGGAATGTCTAATGAAATGTACAATACTGTTGCCCGTGTGACTGATGGGATCTACGAAGGCATTGCTATTGGTGGAGACGTGTTCCCAGGATCGACTTTATCTGACCACATCCTTCGGTTTAACAACATCCCACAGATAAAAATGATGGTTGTACTTGGAGAGCTTGGAGGAAGAGATGAATACTCTCTTGTTGAAGCTTTGAAAGAGGGAAAAGTCAATAAACCTGTGGTTGCTTGGGTCAGTGGAACTTGTGCACGACTCTTCAAGTCTGAAGTACAGTTTGGTCATGCAGGTGCCAAAAGTGGCGGCGAGATGGAGTCTGCACAAGCCAAGAATCAAGCTCTCATAGATGCTGGAGCTATTGTTCCCACTTCATTTGAAGCTCTAGAATCTGCAATCAAAGAGACTTTTGAGAAACTGGTTGAAGAAGGAAAGGTCTCTCCTATCAAGGAAGTCATTCCTCCACAAATCCCTGAGGATCTCAATTCTGCAATTAAGAGTGGGAAAGTCCGGGCTCCTACTCACATCATCTCCACCATATCTGATGACAGAGGGGAGGAACCATGCTATGCTGGTGTTCCAATGTCTTCCATCATCGAACAAGGCTATGGAGTGGGTGATGTCATTTCCCTTCTATGGTTCAAACGTAGTCTACCTCGTTACTGTACAAAATTCATTGAGATATGCATAATGCTGTGTGCTGATCACGGTCCATGCGTCTCCGGCGCTCACAACACCATTGTAACAGCAAGAGCAGGCAAAGACCTCGTCTCAAGTCTTGTCTCAGGTTTATTGACCATTGGTCCCCGATTTGGTGGTGCCATTGATGACGCTGCTCGATACTTCAAAGACGCGTGTGACAGGAATCTCACACCTTATGAATTTGTTGAGGGAATGAAGAAAAAGGGAATCCGAGTCCCCGGGATTGGACACAGGATCAAGAGCAGAGACAACAGAGACAAAAGAGTGGAGCTTCTTCAGAAATTTGCTCGGTCCAACTTCCCATCAGTGAAGTACATGGAGTACGCAGTGACAGTGGAGACATACACGCTCTCAAAGGCAAACAACCTCGTACTCAACGTTGATGGAGCCATTGGATCTCTCTTCTTGGACCTTCTAGCTGGAAGTGGGATGTTCACTAAACAAGAGATTGACGAGATTGTTCAGATCGGTTATCTCAACGGTCTGTTTGTTCTTGCTCGCTCCATCGGTTTGATCGGGCACACGTTTGATCAGAAGAGATTGAAGCAGCCACTGTATCGTCACCCATGGGAAGATGTGTTGTACACCAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003878 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006084 GO:0006085 GO:0006139 GO:0006163 GO:0006164 GO:0006637 GO:0006725 GO:0006732 GO:0006753 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009117 GO:0009150 GO:0009152 GO:0009165 GO:0009259 GO:0009260 GO:0009346 GO:0009987 GO:0016020 GO:0016740 GO:0016746 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0032991 GO:0033865 GO:0033866 GO:0033875 GO:0034030 GO:0034032 GO:0034033 GO:0034641 GO:0034654 GO:0035383 GO:0035384 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044272 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046390 GO:0046483 GO:0046912 GO:0051186 GO:0051188 GO:0055086 GO:0071616 GO:0071704 GO:0071944 GO:0072521 GO:0072522 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00020 ko00720 ko01100 ko01110 ko01120 ko01130 map00020 map00720 map01100 map01110 map01120 map01130

Pfam Domains

Protein Families

Citrate_synt CoA_binding Ligase_CoA

Protein Analysis

608

Amino Acids

65.83

Weight (kDa)

7.54

Isoelectric Point (pI)

35.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ligase_CoA	PF00549	173 - 297	3e-17	CoA-ligase
Citrate_synt	PF00285	397 - 597	7.7e-17	Citrate synthase, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008568)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06650 AT3G06650 AT5G49460 AT5G49460
fragaria_vesca	FvH4_4g19740 FvH4_4g19740 FvH4_4g19740 FvH4_4g19740
malus_domestica	MD13G1153500.v1.1 MD16G1154000.v1.1
prunus_persica	Prupe.1G117200_v2.0.a1 Prupe.1G117200_v2.0.a1
pyrus_communis	pycom13g13120 pycom16g13050
rosa_chinensis	RchiOBHm_Chr4g0425291
rosa_laevigata	RLG00000007382
rosa_multiflora	Rmu_sc0009125.1_g000003
rosa_roxburghii	Rroxscaffold_5G00367290
rosa_rugosa	Rorug04G0202100 Rorug04G0202200 Rorug04G0202300
rosa_samantha	Rh4CG276200
rosa_wichuraiana	Rw4G022420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	812
Acc16I	TGCGCA	1 cut(s)	225
Acc36I	ACCTGC	1 cut(s)	812
AccB1I	GGYRCC	2 cut(s)	824, 1349
AccI	GTMKAC	1 cut(s)	1183
AccII	CGCG	1 cut(s)	1385
AciI	CCGC	3 cut(s)	201, 236, 837
AclI	AACGTT	1 cut(s)	1611
AclWI	GGATC	6 cut(s)	511, 587, 628, 1017, 1475, 1636
AcsI	RAATTY	3 cut(s)	1202, 1412, 1514
AcuI	CTGAAG	4 cut(s)	165, 354, 822, 1493
AfaI	GTAC	9 cut(s)	28, 551, 684, 807, 1198, 1547, 1556, 1605, 1817
AfiI	CCNNNNNNNGG	3 cut(s)	1167, 1343, 1457
AflIII	ACRYGT	3 cut(s)	609, 1383, 1755
AhdI	GACNNNNNGTC	1 cut(s)	1332
AjiI	CACGTC	2 cut(s)	104, 610
AjnI	CCWGG	3 cut(s)	136, 499, 616
AjuI	GAANNNNNNNTTGG	2 cut(s)	795, 827
AloI	GAACNNNNNNTCC	2 cut(s)	879, 911
Alw21I	GWGCWC	1 cut(s)	787
Alw44I	GTGCAC	1 cut(s)	783
AlwI	GGATC	6 cut(s)	511, 587, 628, 1017, 1475, 1636
AlwNI	CAGNNNCTG	1 cut(s)	1786
Ama87I	CYCGRG	1 cut(s)	1451
ApaLI	GTGCAC	1 cut(s)	783
ApoI	RAATTY	3 cut(s)	1202, 1412, 1514
ArsI	GACNNNNNNTTYG	2 cut(s)	1284, 1316
Asp700I	GAANNNNTTC	3 cut(s)	150, 339, 987
AspLEI	GCGC	2 cut(s)	226, 1259
AspS9I	GGNCC	5 cut(s)	404, 1241, 1334, 1524, 1642
AsuC2I	CCSGG	3 cut(s)	1043, 1452, 1453
AsuHPI	GGTGA	3 cut(s)	461, 1160, 1787
AvaI	CYCGRG	1 cut(s)	1451
AvaII	GGWCC	5 cut(s)	404, 1241, 1334, 1524, 1642
AxyI	CCTNAGG	1 cut(s)	1005
BaeGI	GKGCMC	2 cut(s)	787, 1755
BanI	GGYRCC	2 cut(s)	824, 1349
BanII	GRGCYC	1 cut(s)	1048
BauI	CACGAG	1 cut(s)	378
BbsI	GAAGAC	1 cut(s)	1110
Bbv12I	GWGCWC	1 cut(s)	787
BccI	CCATC	7 cut(s)	569, 670, 838, 1130, 1543, 1610, 1745
BcgI	CGANNNNNNTGC	4 cut(s)	575, 609, 1279, 1313
BciT130I	CCWGG	3 cut(s)	138, 501, 618
BclI	TGATCA	2 cut(s)	1234, 1762
BcnI	CCSGG	3 cut(s)	1043, 1452, 1453
BfaI	CTAG	2 cut(s)	917, 1649
BfmI	CTRYAG	1 cut(s)	456
BfoI	RGCGCY	1 cut(s)	1260
BfuAI	ACCTGC	1 cut(s)	812
BglI	GCCNNNNNGGC	1 cut(s)	209
Bme1390I	CCNGG	6 cut(s)	138, 501, 618, 1043, 1452, 1453
Bme18I	GGWCC	5 cut(s)	404, 1241, 1334, 1524, 1642
BmeRI	GACNNNNNGTC	1 cut(s)	1332
BmeT110I	CYCGRG	1 cut(s)	1451
BmgBI	CACGTC	2 cut(s)	104, 610
BmgT120I	GGNCC	5 cut(s)	404, 1241, 1334, 1524, 1642
BmiI	GGNNCC	7 cut(s)	436, 826, 1047, 1092, 1336, 1351, 1621
BmrFI	CCNGG	6 cut(s)	138, 501, 618, 1043, 1452, 1453
BmsI	GCATC	3 cut(s)	235, 266, 871
BpiI	GAAGAC	1 cut(s)	1110
BpmI	CTGGAG	2 cut(s)	453, 906
BpuEI	CTTGAG	1 cut(s)	1288
BpuMI	CCSGG	3 cut(s)	1043, 1452, 1453
BsaI	GGTCTC	1 cut(s)	973
BsaJI	CCNNGG	5 cut(s)	285, 616, 1450, 1451, 1799
BsaXI	ACNNNNNCTCC	4 cut(s)	879, 909, 1046, 1076
Bsc4I	CCNNNNNNNGG	3 cut(s)	1167, 1343, 1457
Bse118I	RCCGGY	1 cut(s)	406
Bse1I	ACTGG	2 cut(s)	481, 954
Bse21I	CCTNAGG	1 cut(s)	1005
Bse3DI	GCAATG	1 cut(s)	591
BseBI	CCWGG	3 cut(s)	138, 501, 618
BseDI	CCNNGG	5 cut(s)	285, 616, 1450, 1451, 1799
BseGI	GGATG	6 cut(s)	226, 244, 281, 639, 657, 1668
BseLI	CCNNNNNNNGG	3 cut(s)	1167, 1343, 1457
BseMI	GCAATG	1 cut(s)	591
BseMII	CTCAG	2 cut(s)	996, 1329
BseNI	ACTGG	2 cut(s)	481, 954
BseSI	GKGCMC	2 cut(s)	787, 1755
BsgI	GTGCAG	1 cut(s)	837
Bsh1236I	CGCG	1 cut(s)	1385
BshNI	GGYRCC	2 cut(s)	824, 1349
BsiHKAI	GWGCWC	1 cut(s)	787
BsiHKCI	CYCGRG	1 cut(s)	1451
BsiSI	CCGG	4 cut(s)	407, 1042, 1254, 1452
BslFI	GGGAC	3 cut(s)	24, 1320, 1433
BslI	CCNNNNNNNGG	3 cut(s)	1167, 1343, 1457
BsmBI	CGTCTC	3 cut(s)	600, 1255, 1306
BsmFI	GGGAC	3 cut(s)	24, 1320, 1433
BsmI	GAATGC	1 cut(s)	81
Bso31I	GGTCTC	1 cut(s)	973
BsoBI	CYCGRG	1 cut(s)	1451
Bsp1286I	GDGCHC	3 cut(s)	787, 1048, 1755
Bsp1407I	TGTACA	3 cut(s)	549, 1196, 1815
Bsp19I	CCATGG	2 cut(s)	285, 1799
BspACI	CCGC	3 cut(s)	201, 236, 837
BspCNI	CTCAG	2 cut(s)	997, 1328
BspFNI	CGCG	1 cut(s)	1385
BspLI	GGNNCC	7 cut(s)	436, 826, 1047, 1092, 1336, 1351, 1621
BspMAI	CTGCAG	1 cut(s)	460
BspMI	ACCTGC	1 cut(s)	812
BspPI	GGATC	6 cut(s)	511, 587, 628, 1017, 1475, 1636
BspT107I	GGYRCC	2 cut(s)	824, 1349
BspTNI	GGTCTC	1 cut(s)	973
BsrDI	GCAATG	1 cut(s)	591
BsrFI	RCCGGY	1 cut(s)	406
BsrGI	TGTACA	3 cut(s)	549, 1196, 1815
BsrI	ACTGG	2 cut(s)	481, 954
BssAI	RCCGGY	1 cut(s)	406
BssECI	CCNNGG	5 cut(s)	285, 616, 1450, 1451, 1799
BssSI	CACGAG	1 cut(s)	378
BssT1I	CCWWGG	2 cut(s)	285, 1799
Bst2BI	CACGAG	1 cut(s)	378
Bst2UI	CCWGG	3 cut(s)	138, 501, 618
Bst4CI	ACNGT	8 cut(s)	415, 559, 810, 1196, 1241, 1567, 1715, 1788
Bst6I	CTCTTC	4 cut(s)	697, 797, 1640, 1763
BstAPI	GCANNNNNTGC	1 cut(s)	218
BstAUI	TGTACA	3 cut(s)	549, 1196, 1815
BstC8I	GCNNGC	3 cut(s)	488, 1288, 1732
BstDEI	CTNAG	3 cut(s)	357, 1005, 1315
BstDSI	CCRYGG	2 cut(s)	285, 1799
BstF5I	GGATG	6 cut(s)	226, 244, 281, 639, 657, 1668
BstFNI	CGCG	1 cut(s)	1385
BstH2I	RGCGCY	1 cut(s)	1260
BstHHI	GCGC	2 cut(s)	226, 1259
BstMWI	GCNNNNNNNGC	5 cut(s)	209, 218, 221, 329, 1254
BstNI	CCWGG	3 cut(s)	138, 501, 618
BstSCI	CCNGG	6 cut(s)	136, 499, 616, 1041, 1450, 1451
BstSFI	CTRYAG	1 cut(s)	456
BstSLI	GKGCMC	2 cut(s)	787, 1755
BstUI	CGCG	1 cut(s)	1385
BstV2I	GAAGAC	1 cut(s)	1110
BstX2I	RGATCY	4 cut(s)	503, 579, 1009, 1628
BstYI	RGATCY	4 cut(s)	503, 579, 1009, 1628
Bsu36I	CCTNAGG	1 cut(s)	1005
BtgI	CCRYGG	2 cut(s)	285, 1799
BtrI	CACGTC	2 cut(s)	104, 610
BtsCI	GGATG	6 cut(s)	226, 244, 281, 639, 657, 1668
BtsI	GCAGTG	1 cut(s)	1566
BtsIMutI	CAGTG	6 cut(s)	488, 778, 1545, 1566, 1572, 1784
BveI	ACCTGC	1 cut(s)	812
Cac8I	GCNNGC	3 cut(s)	488, 1288, 1732
CaiI	CAGNNNCTG	1 cut(s)	1786
CfoI	GCGC	2 cut(s)	226, 1259
Cfr10I	RCCGGY	1 cut(s)	406
Cfr13I	GGNCC	5 cut(s)	404, 1241, 1334, 1524, 1642
Cfr9I	CCCGGG	1 cut(s)	1451
CseI	GACGC	3 cut(s)	1237, 1370, 1391
Csp6I	GTAC	9 cut(s)	27, 550, 683, 806, 1197, 1546, 1555, 1604, 1816
CspCI	CAANNNNNGTGG	4 cut(s)	511, 546, 889, 924
CviAII	CATG	7 cut(s)	197, 286, 818, 1095, 1245, 1549, 1800
CviQI	GTAC	9 cut(s)	27, 550, 683, 806, 1197, 1546, 1555, 1604, 1816
DdeI	CTNAG	3 cut(s)	357, 1005, 1315
DriI	GACNNNNNGTC	1 cut(s)	1332
Eam1104I	CTCTTC	4 cut(s)	697, 797, 1640, 1763
Eam1105I	GACNNNNNGTC	1 cut(s)	1332
EarI	CTCTTC	4 cut(s)	697, 797, 1640, 1763
Eco130I	CCWWGG	2 cut(s)	285, 1799
Eco24I	GRGCYC	1 cut(s)	1048
Eco31I	GGTCTC	1 cut(s)	973
Eco47I	GGWCC	5 cut(s)	404, 1241, 1334, 1524, 1642
Eco57I	CTGAAG	4 cut(s)	165, 354, 822, 1493
Eco81I	CCTNAGG	1 cut(s)	1005
Eco88I	CYCGRG	1 cut(s)	1451
EcoRII	CCWGG	3 cut(s)	136, 499, 616
EcoT14I	CCWWGG	2 cut(s)	285, 1799
EcoT22I	ATGCAT	1 cut(s)	1220
EcoT38I	GRGCYC	1 cut(s)	1048
ErhI	CCWWGG	2 cut(s)	285, 1799
Esp3I	CGTCTC	3 cut(s)	600, 1255, 1306
FaeI	CATG	7 cut(s)	200, 289, 821, 1098, 1248, 1552, 1803
FaqI	GGGAC	3 cut(s)	24, 1320, 1433
FatI	CATG	7 cut(s)	196, 285, 817, 1094, 1244, 1548, 1799
FbaI	TGATCA	2 cut(s)	1234, 1762
FblI	GTMKAC	1 cut(s)	1183
FokI	GGATG	6 cut(s)	213, 251, 268, 626, 644, 1675
FriOI	GRGCYC	1 cut(s)	1048
FspBI	CTAG	2 cut(s)	917, 1649
FspI	TGCGCA	1 cut(s)	225
GlaI	GCGC	2 cut(s)	225, 1258
GsuI	CTGGAG	2 cut(s)	453, 906
HaeII	RGCGCY	1 cut(s)	1260
HapII	CCGG	4 cut(s)	407, 1042, 1254, 1452
HgaI	GACGC	3 cut(s)	1237, 1370, 1391
HhaI	GCGC	2 cut(s)	226, 1259
Hin1II	CATG	7 cut(s)	200, 289, 821, 1098, 1248, 1552, 1803
Hin6I	GCGC	2 cut(s)	224, 1257
HinP1I	GCGC	2 cut(s)	224, 1257
HindIII	AAGCTT	2 cut(s)	36, 726
HinfI	GANTC	9 cut(s)	126, 347, 789, 848, 865, 920, 1396, 1440, 1446
HpaII	CCGG	4 cut(s)	407, 1042, 1254, 1452
HphI	GGTGA	3 cut(s)	461, 1160, 1787
Hpy166II	GTNNAC	5 cut(s)	101, 785, 1184, 1668, 1818
Hpy188I	TCNGA	9 cut(s)	145, 352, 634, 802, 1075, 1445, 1512, 1698, 1767
Hpy188III	TCNNGA	3 cut(s)	344, 917, 1471
Hpy8I	GTNNAC	5 cut(s)	101, 785, 1184, 1668, 1818
HpyAV	CCTTC	8 cut(s)	123, 140, 329, 581, 653, 953, 1172, 1655
HpyCH4III	ACNGT	8 cut(s)	415, 559, 810, 1196, 1241, 1567, 1715, 1788
HpyCH4IV	ACGT	5 cut(s)	103, 609, 1177, 1611, 1757
HpyF10VI	GCNNNNNNNGC	5 cut(s)	209, 218, 221, 329, 1254
HpyF3I	CTNAG	3 cut(s)	357, 1005, 1315
HpySE526I	ACGT	5 cut(s)	103, 609, 1177, 1611, 1757
Hsp92II	CATG	7 cut(s)	200, 289, 821, 1098, 1248, 1552, 1803
HspAI	GCGC	2 cut(s)	224, 1257
Ksp22I	TGATCA	2 cut(s)	1234, 1762
LmnI	GCTCC	6 cut(s)	434, 887, 1051, 1501, 1619, 1739
LweI	GCATC	3 cut(s)	235, 266, 871
MaeI	CTAG	2 cut(s)	917, 1649
MaeII	ACGT	5 cut(s)	103, 609, 1177, 1611, 1757
MaeIII	GTNAC	6 cut(s)	568, 1190, 1273, 1388, 1561, 1793
MboII	GAAGA	9 cut(s)	714, 784, 968, 1110, 1441, 1499, 1627, 1780, 1817
MfeI	CAATTG	1 cut(s)	465
MflI	RGATCY	4 cut(s)	503, 579, 1009, 1628
MhlI	GDGCHC	3 cut(s)	787, 1048, 1755
MluCI	AATT	7 cut(s)	324, 465, 1015, 1023, 1202, 1412, 1514
MluI	ACGCGT	1 cut(s)	1383
MlyI	GAGTC	3 cut(s)	783, 857, 1455
MmeI	TCCRAC	3 cut(s)	254, 397, 1551
Mph1103I	ATGCAT	1 cut(s)	1220
MroXI	GAANNNNTTC	3 cut(s)	150, 339, 987
MseI	TTAA	4 cut(s)	312, 441, 651, 1026
MslI	CAYNNNNRTG	1 cut(s)	822
MspA1I	CMGCKG	2 cut(s)	236, 364
MspI	CCGG	4 cut(s)	407, 1042, 1254, 1452
MspR9I	CCNGG	6 cut(s)	138, 501, 618, 1043, 1452, 1453
MunI	CAATTG	1 cut(s)	465
Mva1269I	GAATGC	1 cut(s)	81
MvaI	CCWGG	3 cut(s)	138, 501, 618
MvnI	CGCG	1 cut(s)	1385
MwoI	GCNNNNNNNGC	5 cut(s)	209, 218, 221, 329, 1254
NciI	CCSGG	3 cut(s)	1043, 1452, 1453
NcoI	CCATGG	2 cut(s)	285, 1799
NlaIII	CATG	7 cut(s)	200, 289, 821, 1098, 1248, 1552, 1803
NlaIV	GGNNCC	7 cut(s)	436, 826, 1047, 1092, 1336, 1351, 1621
NmuCI	GTSAC	4 cut(s)	568, 1388, 1561, 1793
NsbI	TGCGCA	1 cut(s)	225
NsiI	ATGCAT	1 cut(s)	1220
PaqCI	CACCTGC	1 cut(s)	812
PcsI	WCGNNNNNNNCGW	2 cut(s)	1245, 1608
PctI	GAATGC	1 cut(s)	81
PdmI	GAANNNNTTC	3 cut(s)	150, 339, 987
PfeI	GAWTC	6 cut(s)	126, 347, 865, 920, 1396, 1440
PflFI	GACNNNGTC	1 cut(s)	1298
PleI	GAGTC	3 cut(s)	783, 856, 1454
PpsI	GAGTC	3 cut(s)	783, 856, 1454
Psp1406I	AACGTT	1 cut(s)	1611
Psp6I	CCWGG	3 cut(s)	136, 499, 616
PspGI	CCWGG	3 cut(s)	136, 499, 616
PspN4I	GGNNCC	7 cut(s)	436, 826, 1047, 1092, 1336, 1351, 1621
PspPI	GGNCC	5 cut(s)	404, 1241, 1334, 1524, 1642
PstI	CTGCAG	1 cut(s)	460
PstNI	CAGNNNCTG	1 cut(s)	1786
PsuI	RGATCY	4 cut(s)	503, 579, 1009, 1628
PsyI	GACNNNGTC	1 cut(s)	1298
PvuII	CAGCTG	1 cut(s)	364
RsaI	GTAC	9 cut(s)	28, 551, 684, 807, 1198, 1547, 1556, 1605, 1817
RsaNI	GTAC	9 cut(s)	27, 550, 683, 806, 1197, 1546, 1555, 1604, 1816
RseI	CAYNNNNRTG	1 cut(s)	822
SaqAI	TTAA	4 cut(s)	312, 441, 651, 1026
Sau96I	GGNCC	5 cut(s)	404, 1241, 1334, 1524, 1642
SchI	GAGTC	3 cut(s)	783, 857, 1455
ScrFI	CCNGG	6 cut(s)	138, 501, 618, 1043, 1452, 1453
SduI	GDGCHC	3 cut(s)	787, 1048, 1755
SfaNI	GCATC	3 cut(s)	235, 266, 871
SfcI	CTRYAG	1 cut(s)	456
SinI	GGWCC	5 cut(s)	404, 1241, 1334, 1524, 1642
SmaI	CCCGGG	1 cut(s)	1453
SmiMI	CAYNNNNRTG	1 cut(s)	822
SmlI	CTYRAG	1 cut(s)	1303
SmoI	CTYRAG	1 cut(s)	1303
Sse9I	AATT	7 cut(s)	324, 465, 1015, 1023, 1202, 1412, 1514
SsiI	CCGC	3 cut(s)	201, 236, 837
SspMI	CTAG	2 cut(s)	917, 1649
StyD4I	CCNGG	6 cut(s)	136, 499, 616, 1041, 1450, 1451
StyI	CCWWGG	2 cut(s)	285, 1799
TaaI	ACNGT	8 cut(s)	415, 559, 810, 1196, 1241, 1567, 1715, 1788
TaiI	ACGT	5 cut(s)	106, 612, 1180, 1614, 1760
TaqI	TCGA	5 cut(s)	81, 87, 623, 1128, 1369
TaqII	GACCGA	1 cut(s)	1512
TasI	AATT	7 cut(s)	324, 465, 1015, 1023, 1202, 1412, 1514
TatI	WGTACW	6 cut(s)	549, 682, 805, 1196, 1545, 1815
TauI	GCSGC	2 cut(s)	203, 840
TfiI	GAWTC	6 cut(s)	126, 347, 865, 920, 1396, 1440
Tru1I	TTAA	4 cut(s)	312, 441, 651, 1026
Tru9I	TTAA	4 cut(s)	312, 441, 651, 1026
TscAI	CASTG	6 cut(s)	488, 778, 1545, 1566, 1572, 1791
TseFI	GTSAC	4 cut(s)	568, 1388, 1561, 1793
Tsp45I	GTSAC	4 cut(s)	568, 1388, 1561, 1793
TspDTI	ATGAA	9 cut(s)	185, 235, 270, 558, 723, 894, 1195, 1425, 1442
TspMI	CCCGGG	1 cut(s)	1451
TspRI	CASTG	6 cut(s)	488, 778, 1545, 1566, 1572, 1791
Tth111I	GACNNNGTC	1 cut(s)	1298
VneI	GTGCAC	1 cut(s)	783
VpaK11BI	GGWCC	5 cut(s)	404, 1241, 1334, 1524, 1642
XapI	RAATTY	3 cut(s)	1202, 1412, 1514
XbaI	TCTAGA	1 cut(s)	916
XmaI	CCCGGG	1 cut(s)	1451
XmiI	GTMKAC	1 cut(s)	1183
XmnI	GAANNNNTTC	3 cut(s)	150, 339, 987
XspI	CTAG	2 cut(s)	917, 1649
Zsp2I	ATGCAT	1 cut(s)	1220

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.