Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0008568

Physical Location & Seq

Genomic Coordinates Reverse (-)

9294702 .. 9298682

Gene Structure 3981 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom16g13050.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1830 bp

ATGGCCACTGGACAACTTTTTTCGCGCACCACTCAGGCGCTGTTCTACAACTACAAGCAGCTCCCAATCCAGCGCATGCTCGATTTTGACTTCCTTTGCGGGAGGGAAACACCTTCGGTTGCTGGAATCATTAACCCCGGTTCTGAGGGATTTCAGAAGCTCTTTTTCGGTCAGGAGGAAATCGCCATACCAGTGCACTCAAACATTGAAGCATCTTGCGCTGCTCATCCTACTGCCGATGTCTTCATTAACTTTGCTTCATACAGAAGTGCTGCCGCTTCTTCCATGGCTGCTCTGAAGCAACCAACCATTAGAGTTGTGGCAATCATTGCTGAAGGTGTTCCTGAGTCAGACACTAAGCAGTTGATCGCATATGCACGGGCAAACAACAAGGTTGTCATTGGCCCAGCTACTGTTGGAGGAATTCAAGCTGGAGCTTTTAAGATTGGTGACACTGCTGGAACTATTGATAACATTATTCACTGCAAGCTATACAGGCCCGATCGATCTGTTGGGTTTGTCTCCAAATCTGGTGGCATGTCTAATGAGTTATACAATACTGTAGCTCGTGTAACAGATGGACTTTATGAAGGTATTGCTATTGGAGGTGATGTTTTCCCAGGTTCTACTCTTTCTGACCATGTTCTGCGGTTTAACAATATCCCCCAGGTTAAACTTATTGTTGTTCTTGGAGAACTTGGCGGGAGAGACGAGTATTCTTTAGTTGAAGCTTTGAAACAGGGAAAAGTTACCAAACCAGTGGTTGCTTGGGTTAGTGGAACTTGTGCAAGGCTTTTCAAATCCGAAGTACAATTTGGTCATGCCGGTGCAAAAAGTGGTGGTGAGATGGAATCTGCACAAGCAAAGAATCAAGCCTTGAGGGATGCTGGTGCTGTTGTTCCCAGTTCATATGAAGCTCTGGAAACTGCTATCAAGGAAACATTTGAAAAACTGGTTGAGCAAGGGAAGATTGCCCCAGTCAAGGAATTCAAGCCTCCACAAATCCCTGAAGATCTTAACTCTGCAATTAAGAGCGGAAAAGTTCGTGCTCCAACTCATATTATATCCACTATCTCCGATGACAGAGGTGAGGAACCATGCTATGGTGGTGTACCTATGTCTTCCATTGTCGAGCAGGGTTATGGTGTGGGTGATGTTATCTCTCTTTTGTGGTTCAAGCGCAGCCTTCCTAGTTACTGTACTAAATTTATCGAGATTTGCATCATGTTATGTGCCGACCATGGTCCTTGCGTCTCTGGTGCTCACAACACAATAGTAACTGCTAGGGCTGGCAAGGATCTTGTTTCCAGCCTTGTTGCAGGTTTGCTCACAATTGGACCACGATTTGGTGGTGCCGTTGATGATGCTGCTCGTTACTTCAAGGACGCATATGACAAGAACCTTACACCTTATGAATTCGTCGAAAGTATGAAGAAGAAGGGCATTCGTGTGCCAGGGATTGGGCACAGGATCAAGAGAGGGGACAACAGAGATAAGAGAGTAGAGCTTCTACAAGCGTTTGCACGCACTAATTTCCCTTCTGTCAAGTACATGGAATATGCCGTTCAAGTTGAAACCTACACACTCTCAAAGGCTAACAACCTGGTCCTCAACGTTGATGGCGCAATTGGAACCTTATTCTTGGATCTTCTTGCTGGCAGTGGAATGTTCACCAAGCCAGAGATTGACGAGATTGTTGAGATTGGATATCTGAATGGGCTCTTCGTGCTGGCACGTTCTATTGGTTTGATTGGGCACACATTCGACCAAAAGAGGTTGAAGCAGCCCCTATACCGCCACCCATGGGAGGACGTTCTATACACCAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003878 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006084 GO:0006085 GO:0006139 GO:0006163 GO:0006164 GO:0006637 GO:0006725 GO:0006732 GO:0006753 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009117 GO:0009150 GO:0009152 GO:0009165 GO:0009259 GO:0009260 GO:0009346 GO:0009987 GO:0016020 GO:0016740 GO:0016746 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0032991 GO:0033865 GO:0033866 GO:0033875 GO:0034030 GO:0034032 GO:0034033 GO:0034641 GO:0034654 GO:0035383 GO:0035384 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044272 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046390 GO:0046483 GO:0046912 GO:0051186 GO:0051188 GO:0055086 GO:0071616 GO:0071704 GO:0071944 GO:0072521 GO:0072522 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00020 ko00720 ko01100 ko01110 ko01120 ko01130 map00020 map00720 map01100 map01110 map01120 map01130

Pfam Domains

Protein Families

Citrate_synt CoA_binding Ligase_CoA

Protein Analysis

610

Amino Acids

66.05

Weight (kDa)

7.94

Isoelectric Point (pI)

31.32

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008568)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06650 AT3G06650 AT5G49460 AT5G49460
fragaria_vesca	FvH4_4g19740 FvH4_4g19740 FvH4_4g19740 FvH4_4g19740
malus_domestica	MD13G1153500.v1.1 MD16G1154000.v1.1
prunus_persica	Prupe.1G117200_v2.0.a1 Prupe.1G117200_v2.0.a1
pyrus_communis	pycom13g13120 pycom16g13050
rosa_chinensis	RchiOBHm_Chr4g0425291
rosa_laevigata	RLG00000007382
rosa_multiflora	Rmu_sc0009125.1_g000003
rosa_roxburghii	Rroxscaffold_5G00367290
rosa_rugosa	Rorug04G0202100 Rorug04G0202200 Rorug04G0202300
rosa_samantha	Rh4CG276200
rosa_wichuraiana	Rw4G022420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1310
AccB1I	GGYRCC	1 cut(s)	1352
AccB7I	CCANNNNNTGG	3 cut(s)	1103, 1346, 1460
AccBSI	CCGCTC	1 cut(s)	1035
AccII	CGCG	1 cut(s)	25
AciI	CCGC	6 cut(s)	99, 276, 649, 702, 1035, 1795
AclI	AACGTT	1 cut(s)	1614
AclWI	GGATC	3 cut(s)	1305, 1478, 1653
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	4 cut(s)	423, 986, 1205, 1415
AcuI	CTGAAG	3 cut(s)	317, 354, 1029
AdeI	CACNNNGTG	1 cut(s)	1827
AfaI	GTAC	4 cut(s)	810, 1113, 1201, 1550
AfiI	CCNNNNNNNGG	6 cut(s)	982, 1103, 1346, 1460, 1804, 1807
AjnI	CCWGG	4 cut(s)	619, 666, 1453, 1602
AjuI	GAANNNNNNNTTGG	2 cut(s)	798, 830
Alw21I	GWGCWC	3 cut(s)	198, 1051, 1264
Alw26I	GTCTC	3 cut(s)	526, 702, 1258
Alw44I	GTGCAC	1 cut(s)	194
AlwI	GGATC	3 cut(s)	1305, 1478, 1653
AlwNI	CAGNNNCTG	2 cut(s)	40, 413
AoxI	GGCC	3 cut(s)	3, 403, 497
ApaLI	GTGCAC	1 cut(s)	194
ApeKI	GCWGC	7 cut(s)	58, 221, 272, 290, 1182, 1367, 1783
ApoI	RAATTY	4 cut(s)	423, 986, 1205, 1415
Asp700I	GAANNNNTTC	1 cut(s)	339
AspLEI	GCGC	6 cut(s)	27, 40, 75, 221, 1182, 1625
AspS9I	GGNCC	5 cut(s)	404, 498, 1244, 1337, 1606
AsuC2I	CCSGG	1 cut(s)	138
AsuHPI	GGTGA	6 cut(s)	461, 620, 854, 1100, 1163, 1663
AvaII	GGWCC	3 cut(s)	1244, 1337, 1606
BaeGI	GKGCMC	3 cut(s)	198, 1467, 1758
BalI	TGGCCA	1 cut(s)	5
BanI	GGYRCC	1 cut(s)	1352
BanII	GRGCYC	1 cut(s)	1722
BauI	CACGAG	1 cut(s)	567
BbsI	GAAGAC	2 cut(s)	235, 1113
Bbv12I	GWGCWC	3 cut(s)	198, 1051, 1264
BbvI	GCAGC	7 cut(s)	70, 208, 259, 277, 1194, 1354, 1795
BccI	CCATC	3 cut(s)	572, 841, 1613
BceAI	ACGGC	2 cut(s)	1340, 1547
BciT130I	CCWGG	4 cut(s)	621, 668, 1455, 1604
BcnI	CCSGG	1 cut(s)	138
BcoDI	GTCTC	3 cut(s)	526, 702, 1258
BfaI	CTAG	2 cut(s)	1191, 1284
BfmI	CTRYAG	1 cut(s)	561
BfoI	RGCGCY	1 cut(s)	41
BfuAI	ACCTGC	1 cut(s)	1310
BglII	AGATCT	1 cut(s)	1012
BisI	GCNGC	8 cut(s)	59, 222, 273, 276, 291, 1183, 1368, 1784
BlsI	GCNGC	8 cut(s)	60, 223, 274, 277, 292, 1184, 1369, 1785
Bme1390I	CCNGG	5 cut(s)	138, 621, 668, 1455, 1604
Bme18I	GGWCC	3 cut(s)	1244, 1337, 1606
BmgT120I	GGNCC	5 cut(s)	404, 498, 1244, 1337, 1606
BmiI	GGNNCC	3 cut(s)	1095, 1354, 1633
BmrFI	CCNGG	5 cut(s)	138, 621, 668, 1455, 1604
BmrI	ACTGGG	2 cut(s)	897, 971
BmsI	GCATC	4 cut(s)	221, 874, 1230, 1354
BmuI	ACTGGG	2 cut(s)	897, 971
BoxI	GACNNNNGTC	1 cut(s)	1242
BpiI	GAAGAC	2 cut(s)	235, 1113
BpmI	CTGGAG	1 cut(s)	453
BpuEI	CTTGAG	1 cut(s)	898
BpuMI	CCSGG	1 cut(s)	138
Bsa29I	ATCGAT	1 cut(s)	505
BsaBI	GATNNNNATC	1 cut(s)	1220
BsaJI	CCNNGG	7 cut(s)	136, 285, 619, 666, 1240, 1454, 1802
BsaXI	ACNNNNNCTCC	2 cut(s)	597, 627
Bsc4I	CCNNNNNNNGG	6 cut(s)	982, 1103, 1346, 1460, 1804, 1807
Bse118I	RCCGGY	1 cut(s)	824
Bse1I	ACTGG	6 cut(s)	13, 191, 758, 903, 957, 977
Bse3DI	GCAATG	1 cut(s)	327
Bse8I	GATNNNNATC	1 cut(s)	1220
BseBI	CCWGG	4 cut(s)	621, 668, 1455, 1604
BseCI	ATCGAT	1 cut(s)	505
BseDI	CCNNGG	7 cut(s)	136, 285, 619, 666, 1240, 1454, 1802
BseGI	GGATG	2 cut(s)	226, 889
BseJI	GATNNNNATC	1 cut(s)	1220
BseLI	CCNNNNNNNGG	6 cut(s)	982, 1103, 1346, 1460, 1804, 1807
BseMI	GCAATG	1 cut(s)	327
BseMII	CTCAG	3 cut(s)	47, 135, 336
BseNI	ACTGG	6 cut(s)	13, 191, 758, 903, 957, 977
BseSI	GKGCMC	3 cut(s)	198, 1467, 1758
BseXI	GCAGC	7 cut(s)	70, 208, 259, 277, 1194, 1354, 1795
BseYI	CCCAGC	1 cut(s)	406
BsgI	GTGCAG	1 cut(s)	840
Bsh1236I	CGCG	1 cut(s)	25
Bsh1285I	CGRYCG	1 cut(s)	505
BshFI	GGCC	3 cut(s)	5, 405, 499
BshNI	GGYRCC	1 cut(s)	1352
BshVI	ATCGAT	1 cut(s)	505
BsiEI	CGRYCG	1 cut(s)	505
BsiHKAI	GWGCWC	3 cut(s)	198, 1051, 1264
BsiSI	CCGG	2 cut(s)	138, 825
BslFI	GGGAC	1 cut(s)	1496
BslI	CCNNNNNNNGG	6 cut(s)	982, 1103, 1346, 1460, 1804, 1807
BsmAI	GTCTC	3 cut(s)	526, 702, 1258
BsmBI	CGTCTC	2 cut(s)	702, 1258
BsmFI	GGGAC	1 cut(s)	1496
BsmI	GAATGC	1 cut(s)	1443
BsnI	GGCC	3 cut(s)	5, 405, 499
Bsp1286I	GDGCHC	6 cut(s)	198, 1051, 1264, 1467, 1722, 1758
Bsp143I	GATC	7 cut(s)	366, 502, 506, 1012, 1297, 1470, 1645
Bsp19I	CCATGG	3 cut(s)	285, 1240, 1802
BspACI	CCGC	6 cut(s)	99, 276, 649, 702, 1035, 1795
BspANI	GGCC	3 cut(s)	5, 405, 499
BspCNI	CTCAG	3 cut(s)	46, 136, 337
BspDI	ATCGAT	1 cut(s)	505
BspFNI	CGCG	1 cut(s)	25
BspLI	GGNNCC	3 cut(s)	1095, 1354, 1633
BspMI	ACCTGC	1 cut(s)	1310
BspPI	GGATC	3 cut(s)	1305, 1478, 1653
BspQI	GCTCTTC	1 cut(s)	1727
BspT107I	GGYRCC	1 cut(s)	1352
BsrBI	CCGCTC	1 cut(s)	1035
BsrDI	GCAATG	1 cut(s)	327
BsrFI	RCCGGY	1 cut(s)	824
BsrI	ACTGG	6 cut(s)	13, 191, 758, 903, 957, 977
BssAI	RCCGGY	1 cut(s)	824
BssECI	CCNNGG	7 cut(s)	136, 285, 619, 666, 1240, 1454, 1802
BssMI	GATC	7 cut(s)	366, 502, 506, 1012, 1297, 1470, 1645
BssSI	CACGAG	1 cut(s)	567
BssT1I	CCWWGG	3 cut(s)	285, 1240, 1802
Bst2BI	CACGAG	1 cut(s)	567
Bst2UI	CCWGG	4 cut(s)	621, 668, 1455, 1604
Bst4CI	ACNGT	3 cut(s)	415, 562, 1199
Bst6I	CTCTTC	1 cut(s)	1727
BstAPI	GCANNNNNTGC	1 cut(s)	329
BstC8I	GCNNGC	6 cut(s)	77, 488, 1291, 1525, 1657, 1731
BstDEI	CTNAG	4 cut(s)	33, 144, 345, 357
BstDSI	CCRYGG	3 cut(s)	285, 1240, 1802
BstF5I	GGATG	2 cut(s)	226, 889
BstFNI	CGCG	1 cut(s)	25
BstH2I	RGCGCY	1 cut(s)	41
BstHHI	GCGC	6 cut(s)	27, 40, 75, 221, 1182, 1625
BstKTI	GATC	7 cut(s)	369, 505, 509, 1015, 1300, 1473, 1648
BstMAI	GTCTC	3 cut(s)	526, 702, 1258
BstMBI	GATC	7 cut(s)	366, 502, 506, 1012, 1297, 1470, 1645
BstMCI	CGRYCG	1 cut(s)	505
BstMWI	GCNNNNNNNGC	4 cut(s)	218, 329, 496, 1726
BstNI	CCWGG	4 cut(s)	621, 668, 1455, 1604
BstNSI	RCATGY	2 cut(s)	79, 541
BstPAI	GACNNNNGTC	1 cut(s)	1242
BstSCI	CCNGG	5 cut(s)	136, 619, 666, 1453, 1602
BstSFI	CTRYAG	1 cut(s)	561
BstSLI	GKGCMC	3 cut(s)	198, 1467, 1758
BstUI	CGCG	1 cut(s)	25
BstV1I	GCAGC	7 cut(s)	70, 208, 259, 277, 1194, 1354, 1795
BstV2I	GAAGAC	2 cut(s)	235, 1113
BstX2I	RGATCY	3 cut(s)	1012, 1297, 1645
BstXI	CCANNNNNNTGG	1 cut(s)	760
BstYI	RGATCY	3 cut(s)	1012, 1297, 1645
Bsu15I	ATCGAT	1 cut(s)	505
BsuRI	GGCC	3 cut(s)	5, 405, 499
BsuTUI	ATCGAT	1 cut(s)	505
BtgI	CCRYGG	3 cut(s)	285, 1240, 1802
BtsCI	GGATG	2 cut(s)	226, 889
BtsI	GCAGTG	3 cut(s)	453, 481, 1666
BtsIMutI	CAGTG	6 cut(s)	6, 198, 453, 481, 765, 1666
BveI	ACCTGC	1 cut(s)	1310
Cac8I	GCNNGC	6 cut(s)	77, 488, 1291, 1525, 1657, 1731
CaiI	CAGNNNCTG	2 cut(s)	40, 413
CfoI	GCGC	6 cut(s)	27, 40, 75, 221, 1182, 1625
Cfr10I	RCCGGY	1 cut(s)	824
Cfr13I	GGNCC	5 cut(s)	404, 498, 1244, 1337, 1606
ClaI	ATCGAT	1 cut(s)	505
CseI	GACGC	2 cut(s)	1240, 1394
CsiI	ACCWGGT	1 cut(s)	1602
Csp6I	GTAC	4 cut(s)	809, 1112, 1200, 1549
CspCI	CAANNNNNGTGG	2 cut(s)	514, 549
CviQI	GTAC	4 cut(s)	809, 1112, 1200, 1549
DdeI	CTNAG	4 cut(s)	33, 144, 345, 357
DpnI	GATC	7 cut(s)	368, 504, 508, 1014, 1299, 1472, 1647
DpnII	GATC	7 cut(s)	366, 502, 506, 1012, 1297, 1470, 1645
DraIII	CACNNNGTG	1 cut(s)	1827
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	1 cut(s)	1727
EarI	CTCTTC	1 cut(s)	1727
Eco130I	CCWWGG	3 cut(s)	285, 1240, 1802
Eco24I	GRGCYC	1 cut(s)	1722
Eco32I	GATATC	1 cut(s)	1709
Eco47I	GGWCC	3 cut(s)	1244, 1337, 1606
Eco57I	CTGAAG	3 cut(s)	317, 354, 1029
EcoRI	GAATTC	3 cut(s)	423, 986, 1415
EcoRII	CCWGG	4 cut(s)	619, 666, 1453, 1602
EcoRV	GATATC	1 cut(s)	1709
EcoT14I	CCWWGG	3 cut(s)	285, 1240, 1802
EcoT38I	GRGCYC	1 cut(s)	1722
ErhI	CCWWGG	3 cut(s)	285, 1240, 1802
Esp3I	CGTCTC	2 cut(s)	702, 1258
FaqI	GGGAC	1 cut(s)	1496
FauI	CCCGC	2 cut(s)	92, 695
FauNDI	CATATG	3 cut(s)	373, 910, 1390
Fnu4HI	GCNGC	8 cut(s)	59, 222, 273, 276, 291, 1183, 1368, 1784
FokI	GGATG	2 cut(s)	213, 896
FriOI	GRGCYC	1 cut(s)	1722
Fsp4HI	GCNGC	8 cut(s)	59, 222, 273, 276, 291, 1183, 1368, 1784
FspBI	CTAG	2 cut(s)	1191, 1284
GlaI	GCGC	6 cut(s)	26, 39, 74, 220, 1181, 1624
GluI	GCNGC	8 cut(s)	59, 222, 273, 276, 291, 1183, 1368, 1784
GsaI	CCCAGC	1 cut(s)	410
GsuI	CTGGAG	1 cut(s)	453
HaeII	RGCGCY	1 cut(s)	41
HaeIII	GGCC	3 cut(s)	5, 405, 499
HapII	CCGG	2 cut(s)	138, 825
HgaI	GACGC	2 cut(s)	1240, 1394
HhaI	GCGC	6 cut(s)	27, 40, 75, 221, 1182, 1625
Hin6I	GCGC	6 cut(s)	25, 38, 73, 219, 1180, 1623
HinP1I	GCGC	6 cut(s)	25, 38, 73, 219, 1180, 1623
HindIII	AAGCTT	1 cut(s)	729
HinfI	GANTC	4 cut(s)	126, 347, 851, 868
HpaII	CCGG	2 cut(s)	138, 825
HphI	GGTGA	6 cut(s)	461, 620, 854, 1100, 1163, 1663
Hpy166II	GTNNAC	3 cut(s)	196, 1112, 1671
Hpy188I	TCNGA	8 cut(s)	145, 156, 297, 352, 637, 805, 1078, 1713
Hpy188III	TCNNGA	5 cut(s)	173, 344, 920, 1213, 1474
Hpy8I	GTNNAC	3 cut(s)	196, 1112, 1671
Hpy99I	CGWCG	1 cut(s)	1424
HpyAV	CCTTC	6 cut(s)	123, 329, 584, 1196, 1432, 1548
HpyCH4III	ACNGT	3 cut(s)	415, 562, 1199
HpyCH4IV	ACGT	3 cut(s)	1614, 1735, 1812
HpyF10VI	GCNNNNNNNGC	4 cut(s)	218, 329, 496, 1726
HpyF3I	CTNAG	4 cut(s)	33, 144, 345, 357
HpySE526I	ACGT	3 cut(s)	1614, 1735, 1812
HspAI	GCGC	6 cut(s)	25, 38, 73, 219, 1180, 1623
Kzo9I	GATC	7 cut(s)	366, 502, 506, 1012, 1297, 1470, 1645
LguI	GCTCTTC	1 cut(s)	1727
LmnI	GCTCC	3 cut(s)	66, 434, 1054
Lsp1109I	GCAGC	7 cut(s)	70, 208, 259, 277, 1194, 1354, 1795
LweI	GCATC	4 cut(s)	221, 874, 1230, 1354
MabI	ACCWGGT	1 cut(s)	1602
MaeI	CTAG	2 cut(s)	1191, 1284
MaeII	ACGT	3 cut(s)	1614, 1735, 1812
MaeIII	GTNAC	6 cut(s)	449, 571, 748, 1193, 1276, 1373
MalI	GATC	7 cut(s)	368, 504, 508, 1014, 1299, 1472, 1647
MbiI	CCGCTC	1 cut(s)	1035
MboI	GATC	7 cut(s)	366, 502, 506, 1012, 1297, 1470, 1645
MboII	GAAGA	9 cut(s)	235, 273, 979, 1022, 1113, 1444, 1447, 1640, 1714
MfeI	CAATTG	2 cut(s)	1332, 1626
MflI	RGATCY	3 cut(s)	1012, 1297, 1645
MhlI	GDGCHC	6 cut(s)	198, 1051, 1264, 1467, 1722, 1758
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	9 cut(s)	423, 812, 986, 1026, 1205, 1332, 1415, 1531, 1626
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	1 cut(s)	356
MmeI	TCCRAC	2 cut(s)	397, 1076
Mox20I	TGGCCA	1 cut(s)	5
MroXI	GAANNNNTTC	1 cut(s)	339
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	7 cut(s)	132, 249, 441, 654, 672, 1017, 1029
MslI	CAYNNNNRTG	3 cut(s)	191, 825, 1448
Msp20I	TGGCCA	1 cut(s)	5
MspI	CCGG	2 cut(s)	138, 825
MspR9I	CCNGG	5 cut(s)	138, 621, 668, 1455, 1604
MunI	CAATTG	2 cut(s)	1332, 1626
Mva1269I	GAATGC	1 cut(s)	1443
MvaI	CCWGG	4 cut(s)	621, 668, 1455, 1604
MvnI	CGCG	1 cut(s)	25
MwoI	GCNNNNNNNGC	4 cut(s)	218, 329, 496, 1726
NciI	CCSGG	1 cut(s)	138
NcoI	CCATGG	3 cut(s)	285, 1240, 1802
NdeI	CATATG	3 cut(s)	373, 910, 1390
NdeII	GATC	7 cut(s)	366, 502, 506, 1012, 1297, 1470, 1645
NlaIV	GGNNCC	3 cut(s)	1095, 1354, 1633
NmuCI	GTSAC	1 cut(s)	449
NspI	RCATGY	2 cut(s)	79, 541
PaeI	GCATGC	1 cut(s)	79
PciSI	GCTCTTC	1 cut(s)	1727
PctI	GAATGC	1 cut(s)	1443
PdmI	GAANNNNTTC	1 cut(s)	339
PfeI	GAWTC	3 cut(s)	126, 851, 868
PflMI	CCANNNNNTGG	3 cut(s)	1103, 1346, 1460
PkrI	GCNGC	8 cut(s)	60, 223, 274, 277, 292, 1184, 1369, 1785
Ple19I	CGATCG	1 cut(s)	505
PleI	GAGTC	1 cut(s)	355
PpsI	GAGTC	1 cut(s)	355
PshAI	GACNNNNGTC	1 cut(s)	1242
Psp1406I	AACGTT	1 cut(s)	1614
Psp6I	CCWGG	4 cut(s)	619, 666, 1453, 1602
PspFI	CCCAGC	1 cut(s)	406
PspGI	CCWGG	4 cut(s)	619, 666, 1453, 1602
PspN4I	GGNNCC	3 cut(s)	1095, 1354, 1633
PspPI	GGNCC	5 cut(s)	404, 498, 1244, 1337, 1606
PstNI	CAGNNNCTG	2 cut(s)	40, 413
PsuI	RGATCY	3 cut(s)	1012, 1297, 1645
PvuI	CGATCG	1 cut(s)	505
RsaI	GTAC	4 cut(s)	810, 1113, 1201, 1550
RsaNI	GTAC	4 cut(s)	809, 1112, 1200, 1549
RseI	CAYNNNNRTG	3 cut(s)	191, 825, 1448
SapI	GCTCTTC	1 cut(s)	1727
SaqAI	TTAA	7 cut(s)	132, 249, 441, 654, 672, 1017, 1029
SatI	GCNGC	8 cut(s)	59, 222, 273, 276, 291, 1183, 1368, 1784
Sau3AI	GATC	7 cut(s)	366, 502, 506, 1012, 1297, 1470, 1645
Sau96I	GGNCC	5 cut(s)	404, 498, 1244, 1337, 1606
SchI	GAGTC	1 cut(s)	356
ScrFI	CCNGG	5 cut(s)	138, 621, 668, 1455, 1604
SduI	GDGCHC	6 cut(s)	198, 1051, 1264, 1467, 1722, 1758
SexAI	ACCWGGT	1 cut(s)	1602
SfaNI	GCATC	4 cut(s)	221, 874, 1230, 1354
SfcI	CTRYAG	1 cut(s)	561
SinI	GGWCC	3 cut(s)	1244, 1337, 1606
SmiMI	CAYNNNNRTG	3 cut(s)	191, 825, 1448
SmlI	CTYRAG	1 cut(s)	877
SmoI	CTYRAG	1 cut(s)	877
SphI	GCATGC	1 cut(s)	79
Sse9I	AATT	9 cut(s)	423, 812, 986, 1026, 1205, 1332, 1415, 1531, 1626
SsiI	CCGC	6 cut(s)	99, 276, 649, 702, 1035, 1795
SspMI	CTAG	2 cut(s)	1191, 1284
StyD4I	CCNGG	5 cut(s)	136, 619, 666, 1453, 1602
StyI	CCWWGG	3 cut(s)	285, 1240, 1802
TaaI	ACNGT	3 cut(s)	415, 562, 1199
TaiI	ACGT	3 cut(s)	1617, 1738, 1815
TaqI	TCGA	6 cut(s)	81, 505, 1131, 1212, 1422, 1764
TaqII	GACCGA	1 cut(s)	158
TasI	AATT	9 cut(s)	423, 812, 986, 1026, 1205, 1332, 1415, 1531, 1626
TatI	WGTACW	3 cut(s)	808, 1199, 1548
TauI	GCSGC	1 cut(s)	278
TfiI	GAWTC	3 cut(s)	126, 851, 868
Tru1I	TTAA	7 cut(s)	132, 249, 441, 654, 672, 1017, 1029
Tru9I	TTAA	7 cut(s)	132, 249, 441, 654, 672, 1017, 1029
TscAI	CASTG	6 cut(s)	13, 198, 460, 488, 765, 1666
TseFI	GTSAC	1 cut(s)	449
TseI	GCWGC	7 cut(s)	58, 221, 272, 290, 1182, 1367, 1783
Tsp45I	GTSAC	1 cut(s)	449
TspDTI	ATGAA	7 cut(s)	235, 249, 603, 897, 927, 1428, 1445
TspRI	CASTG	6 cut(s)	13, 198, 460, 488, 765, 1666
Van91I	CCANNNNNTGG	3 cut(s)	1103, 1346, 1460
VneI	GTGCAC	1 cut(s)	194
VpaK11BI	GGWCC	3 cut(s)	1244, 1337, 1606
XapI	RAATTY	4 cut(s)	423, 986, 1205, 1415
XceI	RCATGY	2 cut(s)	79, 541
XcmI	CCANNNNNNNNNTGG	2 cut(s)	316, 765
XmnI	GAANNNNTTC	1 cut(s)	339
XspI	CTAG	2 cut(s)	1191, 1284

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.