Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0012292

Physical Location & Seq

Genomic Coordinates Forward (+)

20100545 .. 20104605

Gene Structure 4061 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G49530.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2070 bp

ATGGACTTTGATGATGATGACAAACCAAAAGAGGTTACCAAAACCCGTAGATTCGCTCCTGGCCGTGCCGGAAAGTCTAAACCCAAACCTAAACCGGAACCCACTGCTGATAAACCGGTACAGCCGCCGCCGCAGTCACAAACTGAGTCCGTGAGCAAGACTGAGCATGACGTTGATGCTAAATTCGTTGGCACTAAGGTTGAAACTGAGGTTTGTAATGGCTCTGTGAAGATGGAGATCGATTCAAAAGTCGATAAAGAGCCTGAGATCATGGAAACTGAGTTGATGGAGGAAGATCAGCAGCTTCCATTGCAGGAGGAGAAGGAGGAAGAAGAAGAAGAAGACGACGTTGTTGTTCGTGAAATTGATGTTTTCTTTAAGCCGTCTATTGATGCTAATACTCAGCTTTATGTTTTACAATATCCTCTAAGACCATCTTGGCGTCCATACGAAATGGATGAACGTTGCGAAGAAGTTAGAGTGAATCCTTCTACATCGCAAGTGGAAATTGATTTGTCTATGGATGTTCATTCGAAGAACTATGACTCCAATTTTGGACTAAATATGACTAAGCAGACCTTGAAAACAACATGGAAGCAGCCTCCTACTTTGGATTATGCTGTTGGGGTTCTTTCAGGTGATAAGTTACACTTGAATCCTGTTCATGCTGTTGCCCAGCTCCGGCCGTCTATGCAGTCTCTTTCATCCGACAAAAAAAAGAAACAAGAAGAATCCACTGAAGAATCTGTGGGAACATCCAAAAAGCAGAACAAGGGAGTGCAGCAGGCTTCGACGGATCAGAAACCAATTAATGAAGAAACTTGGGTTTCACTCAAGTATCATGGACTTCAATCCGAATATTGCTCCAGATATCTTAACGGGATGATGGCGAATGGGAACTCTTCGATAGATTTCAACATGAGCCCGGGCACTTATATCAACGAACTATGCCGTGGGGGAAGCAGCAGAAACTCTGAATCGAAAGAAACATTAAAAAGGGTCTTGCTCTCCCTACCACTTAAAGAACGTGTGCAAAAGTTGCTCTGCGAGGGATCTCCGTTGATTCGATACAGTGTTCTTAAACACTATGCTCCTGAGTTCTCAGACGAGGATTTCTTAGGGGCCCTCCAAGAATATGGCAGGTTAGTTCAAGGTTTATGGACTCCTAAAACTAGGCTACTAAAACTAGACGGGCCTGTAGAAGCTGCCAGGGATTATGTCCTGTCTCTGTTCAGCCAGAATACAACTATAAAGTACTCTGAAGTTGAAGCAACGGGTGACAAGATGAAACCTTTGATGGAAAGAATGTTGACTGAATTTGCCAAAGAAAGGCATGTGCTAAAAGATTGGAAGTTCAAAGAGCCCACTGATGTCTCATTCATAAAATCCTACCCGGAGATTGTTAAGGAGCAAGATATTTTTTGGACGGATAAGAGAGAGAATCTAAAGTCGAGAATAACCGCCCAAGGAGGAAAAAGTAGAGCTGATAAAAGGAGGAATGTTGTTGGCACAAGTTCTTCAGTTACAGTTAAACCGGAGGTTCCAACAACCCTCTCTGACAAAGGAGGAAGTTCAAAAAATACGATACATCGTGTTGTTACACAAGAAATGCCAGAAGAACTTAAGAAGGCGTTACCAAAGGCTTTGAAAAAGGTGTTTCAAACTCACAAAGTTTGCCGCTATGAGACGATCTGCCAAGGACTTAGGGATCTTGCAGTTTCGACATCGAATAATCCAAAAGCTGATTCAGGAATGGCGGTGAATGTGGCGCTAGCCGTGGATGCTTACCAGGGCGAGCTCGAAGACGTTATAAATGGAGTGGCTACTAACATTCACGGGTCTTATGTCTCCATATCGTCTCCAGACCATCCTGAATATGATTCTTTGAGGGAAGTGGTCATTAGCCTCTTAACCGGATCTCCACCTGGAACAAAGCTTATGAAGGCTGAGGTATTTGCAGCAGGCAGGACCAAACTTGAACGTGAAATCACCAACAACGAATATATAAAGGTGATGCACGAGATCTGTGAAACCAACTCTTCAGGATGGGTTTTACAGAAAGCTCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005666 GO:0030880 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0055029 GO:0061695 GO:0070013 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko03020 ko04623 ko05169 map00230 map00240 map03020 map04623 map05169

Pfam Domains

Protein Families

Sin_N

Protein Analysis

689

Amino Acids

77.72

Weight (kDa)

5.78

Isoelectric Point (pI)

45.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RPC5	PF04801	114 - 483	6.8e-86	RPC5 protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012292)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49530
fragaria_vesca	FvH4_1g13700 FvH4_1g13700 FvH4_2g10200
malus_domestica	MD02G1151400.v1.1 MD15G1266000.v1.1
prunus_persica	Prupe.7G151600_v2.0.a1 Prupe.7G151600_v2.0.a1
pyrus_communis	pycom02g11880
rosa_chinensis	RchiOBHm_Chr2g0102021
rosa_laevigata	RLG00000017127
rosa_multiflora	Rmu_sc0000157.1_g000006
rosa_roxburghii	Rroxscaffold_2G00140820
rosa_rugosa	Rorug02G0104100.1
rosa_samantha	Rh2AG152100 Rh2BG157500 Rh2CG157500 Rh2DG157600
rosa_wichuraiana	Rw2G011880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1811
Acc36I	ACCTGC	1 cut(s)	1131
AciI	CCGC	6 cut(s)	125, 128, 131, 1461, 1678, 1757
AclI	AACGTT	1 cut(s)	463
AclWI	GGATC	4 cut(s)	804, 1060, 1716, 1924
AcoI	YGGCCR	2 cut(s)	61, 683
AcsI	RAATTY	2 cut(s)	182, 1316
AcuI	CTGAAG	4 cut(s)	759, 1281, 1503, 2025
AcyI	GRCGYC	1 cut(s)	442
AfaI	GTAC	2 cut(s)	120, 1256
AfiI	CCNNNNNNNGG	2 cut(s)	681, 1329
AflII	CTTAAG	1 cut(s)	1622
AflIII	ACRYGT	1 cut(s)	1027
AgeI	ACCGGT	1 cut(s)	115
AjnI	CCWGG	4 cut(s)	58, 1208, 1788, 1924
AjuI	GAANNNNNNNTTGG	2 cut(s)	1729, 1761
AloI	GAACNNNNNNTCC	2 cut(s)	530, 562
AluBI	AGCT	9 cut(s)	304, 406, 679, 1205, 1484, 1742, 1798, 1936, 2063
AluI	AGCT	9 cut(s)	304, 406, 679, 1205, 1484, 1742, 1798, 1936, 2063
Alw21I	GWGCWC	1 cut(s)	1800
Alw26I	GTCTC	6 cut(s)	702, 1230, 1378, 1679, 1852, 1863
AlwI	GGATC	4 cut(s)	804, 1060, 1716, 1924
Ama87I	CYCGRG	1 cut(s)	925
AoxI	GGCC	4 cut(s)	61, 683, 1122, 1193
ApaI	GGGCCC	1 cut(s)	1126
ApeKI	GCWGC	6 cut(s)	301, 598, 781, 963, 1205, 1958
ApoI	RAATTY	2 cut(s)	182, 1316
ArsI	GACNNNNNNTTYG	2 cut(s)	536, 568
AseI	ATTAAT	1 cut(s)	810
AsiGI	ACCGGT	1 cut(s)	115
AspLEI	GCGC	1 cut(s)	1771
AspS9I	GGNCC	4 cut(s)	1122, 1123, 1193, 1968
AsuC2I	CCSGG	3 cut(s)	926, 927, 1394
AsuHPI	GGTGA	5 cut(s)	650, 1289, 1771, 1981, 2023
AsuII	TTCGAA	1 cut(s)	533
AsuNHI	GCTAGC	1 cut(s)	1771
AvaI	CYCGRG	1 cut(s)	925
AvaII	GGWCC	1 cut(s)	1968
BaeGI	GKGCMC	2 cut(s)	932, 1126
BaeI	ACNNNNGTAYC	2 cut(s)	821, 854
BanII	GRGCYC	4 cut(s)	926, 1126, 1365, 1800
BauI	CACGAG	1 cut(s)	2018
BbsI	GAAGAC	2 cut(s)	348, 1809
Bbv12I	GWGCWC	1 cut(s)	1800
BbvCI	CCTCAGC	1 cut(s)	1947
BbvI	GCAGC	6 cut(s)	313, 610, 793, 975, 1192, 1970
BccI	CCATC	7 cut(s)	226, 280, 442, 880, 1291, 1875, 2040
BceAI	ACGGC	5 cut(s)	48, 367, 670, 936, 1760
BciT130I	CCWGG	4 cut(s)	60, 1210, 1790, 1926
BcnI	CCSGG	3 cut(s)	926, 927, 1394
BcoDI	GTCTC	6 cut(s)	702, 1230, 1378, 1679, 1852, 1863
BfaI	CTAG	3 cut(s)	1173, 1187, 1772
BfmI	CTRYAG	1 cut(s)	1197
BfoI	RGCGCY	1 cut(s)	1772
BfrI	CTTAAG	1 cut(s)	1622
BfuAI	ACCTGC	1 cut(s)	1131
BglII	AGATCT	1 cut(s)	2022
BmcAI	AGTACT	1 cut(s)	1256
Bme1390I	CCNGG	7 cut(s)	60, 926, 927, 1210, 1394, 1790, 1926
Bme18I	GGWCC	1 cut(s)	1968
BmeT110I	CYCGRG	1 cut(s)	925
BmgT120I	GGNCC	4 cut(s)	1122, 1123, 1193, 1968
BmiI	GGNNCC	4 cut(s)	99, 1123, 1124, 1542
BmrFI	CCNGG	7 cut(s)	60, 926, 927, 1210, 1394, 1790, 1926
BmsI	GCATC	4 cut(s)	166, 382, 1771, 2004
BmtI	GCTAGC	1 cut(s)	1775
BpiI	GAAGAC	2 cut(s)	348, 1809
BpmI	CTGGAG	2 cut(s)	850, 1845
Bpu10I	CCTNAGC	1 cut(s)	1947
Bpu14I	TTCGAA	1 cut(s)	533
BpuEI	CTTGAG	1 cut(s)	818
BpuMI	CCSGG	3 cut(s)	926, 927, 1394
Bsa29I	ATCGAT	1 cut(s)	240
BsaBI	GATNNNNATC	1 cut(s)	236
BsaHI	GRCGYC	1 cut(s)	442
BsaJI	CCNNGG	7 cut(s)	925, 952, 1209, 1465, 1696, 1776, 1789
BsaWI	WCCGGW	4 cut(s)	94, 115, 1534, 1913
BsaXI	ACNNNNNCTCC	4 cut(s)	530, 560, 1903, 1933
Bsc4I	CCNNNNNNNGG	2 cut(s)	681, 1329
Bse118I	RCCGGY	1 cut(s)	115
Bse3DI	GCAATG	1 cut(s)	308
Bse8I	GATNNNNATC	1 cut(s)	236
BseBI	CCWGG	4 cut(s)	60, 1210, 1790, 1926
BseCI	ATCGAT	1 cut(s)	240
BseDI	CCNNGG	7 cut(s)	925, 952, 1209, 1465, 1696, 1776, 1789
BseGI	GGATG	8 cut(s)	463, 529, 704, 755, 888, 1786, 1867, 2051
BseJI	GATNNNNATC	1 cut(s)	236
BseLI	CCNNNNNNNGG	2 cut(s)	681, 1329
BseMI	GCAATG	1 cut(s)	308
BseMII	CTCAG	9 cut(s)	135, 153, 198, 255, 270, 416, 1086, 1116, 1938
BseRI	GAGGAG	1 cut(s)	332
BseSI	GKGCMC	2 cut(s)	932, 1126
BseX3I	CGGCCG	1 cut(s)	683
BseXI	GCAGC	6 cut(s)	313, 610, 793, 975, 1192, 1970
BseYI	CCCAGC	1 cut(s)	675
BsgI	GTGCAG	1 cut(s)	800
Bsh1285I	CGRYCG	1 cut(s)	686
BshFI	GGCC	4 cut(s)	63, 685, 1124, 1195
BshTI	ACCGGT	1 cut(s)	115
BshVI	ATCGAT	1 cut(s)	240
BsiEI	CGRYCG	1 cut(s)	686
BsiHKAI	GWGCWC	1 cut(s)	1800
BsiHKCI	CYCGRG	1 cut(s)	925
BsiSI	CCGG	8 cut(s)	69, 95, 116, 682, 926, 1394, 1535, 1914
BslI	CCNNNNNNNGG	2 cut(s)	681, 1329
BsmAI	GTCTC	6 cut(s)	702, 1230, 1378, 1679, 1852, 1863
BsmBI	CGTCTC	2 cut(s)	1679, 1863
BsnI	GGCC	4 cut(s)	63, 685, 1124, 1195
BsoBI	CYCGRG	1 cut(s)	925
Bsp119I	TTCGAA	1 cut(s)	533
Bsp120I	GGGCCC	1 cut(s)	1122
Bsp1286I	GDGCHC	5 cut(s)	926, 932, 1126, 1365, 1800
Bsp143I	GATC	9 cut(s)	237, 267, 295, 796, 1052, 1689, 1708, 1916, 2022
BspACI	CCGC	6 cut(s)	125, 128, 131, 1461, 1678, 1757
BspANI	GGCC	4 cut(s)	63, 685, 1124, 1195
BspCNI	CTCAG	9 cut(s)	136, 154, 199, 256, 271, 415, 1087, 1115, 1939
BspDI	ATCGAT	1 cut(s)	240
BspLI	GGNNCC	4 cut(s)	99, 1123, 1124, 1542
BspMI	ACCTGC	1 cut(s)	1131
BspOI	GCTAGC	1 cut(s)	1775
BspPI	GGATC	4 cut(s)	804, 1060, 1716, 1924
BspT104I	TTCGAA	1 cut(s)	533
BspTI	CTTAAG	1 cut(s)	1622
BsrDI	GCAATG	1 cut(s)	308
BsrFI	RCCGGY	1 cut(s)	115
BssAI	RCCGGY	1 cut(s)	115
BssECI	CCNNGG	7 cut(s)	925, 952, 1209, 1465, 1696, 1776, 1789
BssMI	GATC	9 cut(s)	237, 267, 295, 796, 1052, 1689, 1708, 1916, 2022
BssNI	GRCGYC	1 cut(s)	442
BssSI	CACGAG	1 cut(s)	2018
BssT1I	CCWWGG	2 cut(s)	1465, 1696
Bst2BI	CACGAG	1 cut(s)	2018
Bst2UI	CCWGG	4 cut(s)	60, 1210, 1790, 1926
Bst4CI	ACNGT	2 cut(s)	1073, 1528
Bst6I	CTCTTC	2 cut(s)	907, 2044
BstACI	GRCGYC	1 cut(s)	442
BstAFI	CTTAAG	1 cut(s)	1622
BstAPI	GCANNNNNTGC	1 cut(s)	1039
BstBI	TTCGAA	1 cut(s)	533
BstC8I	GCNNGC	4 cut(s)	786, 1773, 1796, 1963
BstDSI	CCRYGG	2 cut(s)	952, 1776
BstEII	GGTNACC	1 cut(s)	34
BstF5I	GGATG	8 cut(s)	463, 529, 704, 755, 888, 1786, 1867, 2051
BstH2I	RGCGCY	1 cut(s)	1772
BstHHI	GCGC	1 cut(s)	1771
BstKTI	GATC	9 cut(s)	240, 270, 298, 799, 1055, 1692, 1711, 1919, 2025
BstMAI	GTCTC	6 cut(s)	702, 1230, 1378, 1679, 1852, 1863
BstMBI	GATC	9 cut(s)	237, 267, 295, 796, 1052, 1689, 1708, 1916, 2022
BstMCI	CGRYCG	1 cut(s)	686
BstMWI	GCNNNNNNNGC	5 cut(s)	130, 310, 691, 1039, 1781
BstNI	CCWGG	4 cut(s)	60, 1210, 1790, 1926
BstNSI	RCATGY	1 cut(s)	1337
BstPI	GGTNACC	1 cut(s)	34
BstSCI	CCNGG	7 cut(s)	58, 924, 925, 1208, 1392, 1788, 1924
BstSFI	CTRYAG	1 cut(s)	1197
BstSLI	GKGCMC	2 cut(s)	932, 1126
BstV1I	GCAGC	6 cut(s)	313, 610, 793, 975, 1192, 1970
BstV2I	GAAGAC	2 cut(s)	348, 1809
BstX2I	RGATCY	4 cut(s)	1052, 1708, 1916, 2022
BstXI	CCANNNNNNTGG	1 cut(s)	1136
BstYI	RGATCY	4 cut(s)	1052, 1708, 1916, 2022
BstZI	CGGCCG	1 cut(s)	683
Bsu15I	ATCGAT	1 cut(s)	240
BsuRI	GGCC	4 cut(s)	63, 685, 1124, 1195
BsuTUI	ATCGAT	1 cut(s)	240
BtgI	CCRYGG	2 cut(s)	952, 1776
BtgZI	GCGATG	1 cut(s)	480
BtsCI	GGATG	8 cut(s)	463, 529, 704, 755, 888, 1786, 1867, 2051
BtsI	GCAGTG	1 cut(s)	102
BtsIMutI	CAGTG	4 cut(s)	102, 735, 1078, 1365
BveI	ACCTGC	1 cut(s)	1131
Cac8I	GCNNGC	4 cut(s)	786, 1773, 1796, 1963
CfoI	GCGC	1 cut(s)	1771
Cfr10I	RCCGGY	1 cut(s)	115
Cfr13I	GGNCC	4 cut(s)	1122, 1123, 1193, 1968
Cfr9I	CCCGGG	1 cut(s)	925
ClaI	ATCGAT	1 cut(s)	240
CseI	GACGC	1 cut(s)	431
Csp6I	GTAC	2 cut(s)	119, 1255
CspAI	ACCGGT	1 cut(s)	115
CviAII	CATG	7 cut(s)	167, 271, 591, 665, 842, 919, 1334
CviQI	GTAC	2 cut(s)	119, 1255
DpnI	GATC	9 cut(s)	239, 269, 297, 798, 1054, 1691, 1710, 1918, 2024
DpnII	GATC	9 cut(s)	237, 267, 295, 796, 1052, 1689, 1708, 1916, 2022
EaeI	YGGCCR	2 cut(s)	61, 683
EagI	CGGCCG	1 cut(s)	683
Eam1104I	CTCTTC	2 cut(s)	907, 2044
EarI	CTCTTC	2 cut(s)	907, 2044
Ecl136II	GAGCTC	1 cut(s)	1798
EclXI	CGGCCG	1 cut(s)	683
Eco130I	CCWWGG	2 cut(s)	1465, 1696
Eco24I	GRGCYC	4 cut(s)	926, 1126, 1365, 1800
Eco32I	GATATC	1 cut(s)	872
Eco47I	GGWCC	1 cut(s)	1968
Eco52I	CGGCCG	1 cut(s)	683
Eco53kI	GAGCTC	1 cut(s)	1798
Eco57I	CTGAAG	4 cut(s)	759, 1281, 1503, 2025
Eco88I	CYCGRG	1 cut(s)	925
Eco91I	GGTNACC	1 cut(s)	34
EcoICRI	GAGCTC	1 cut(s)	1798
EcoO109I	RGGNCCY	2 cut(s)	1122, 1123
EcoO65I	GGTNACC	1 cut(s)	34
EcoRII	CCWGG	4 cut(s)	58, 1208, 1788, 1924
EcoRV	GATATC	1 cut(s)	872
EcoT14I	CCWWGG	2 cut(s)	1465, 1696
EcoT38I	GRGCYC	4 cut(s)	926, 1126, 1365, 1800
ErhI	CCWWGG	2 cut(s)	1465, 1696
Esp3I	CGTCTC	2 cut(s)	1679, 1863
FaeI	CATG	7 cut(s)	170, 274, 594, 668, 845, 922, 1337
FalI	AAGNNNNNCTT	6 cut(s)	421, 453, 563, 595, 635, 667
FatI	CATG	7 cut(s)	166, 270, 590, 664, 841, 918, 1333
FokI	GGATG	8 cut(s)	470, 536, 691, 742, 895, 1793, 1854, 2058
FriOI	GRGCYC	4 cut(s)	926, 1126, 1365, 1800
FspBI	CTAG	3 cut(s)	1173, 1187, 1772
GlaI	GCGC	1 cut(s)	1770
GsaI	CCCAGC	1 cut(s)	679
GsuI	CTGGAG	2 cut(s)	850, 1845
HaeII	RGCGCY	1 cut(s)	1772
HaeIII	GGCC	4 cut(s)	63, 685, 1124, 1195
HapII	CCGG	8 cut(s)	69, 95, 116, 682, 926, 1394, 1535, 1914
HgaI	GACGC	1 cut(s)	431
HhaI	GCGC	1 cut(s)	1771
Hin1I	GRCGYC	1 cut(s)	442
Hin1II	CATG	7 cut(s)	170, 274, 594, 668, 845, 922, 1337
Hin6I	GCGC	1 cut(s)	1769
HinP1I	GCGC	1 cut(s)	1769
HincII	GTYRAC	1 cut(s)	1311
HindII	GTYRAC	1 cut(s)	1311
HindIII	AAGCTT	1 cut(s)	1934
HpaII	CCGG	8 cut(s)	69, 95, 116, 682, 926, 1394, 1535, 1914
HphI	GGTGA	5 cut(s)	650, 1289, 1771, 1981, 2023
Hpy166II	GTNNAC	1 cut(s)	1311
Hpy188I	TCNGA	7 cut(s)	709, 801, 856, 976, 1105, 1261, 1558
Hpy188III	TCNNGA	8 cut(s)	359, 867, 1094, 1452, 1749, 1862, 1871, 2043
Hpy8I	GTNNAC	1 cut(s)	1311
Hpy99I	CGWCG	2 cut(s)	350, 796
HpyAV	CCTTC	4 cut(s)	316, 498, 1621, 1936
HpyCH4III	ACNGT	2 cut(s)	1073, 1528
HpyCH4IV	ACGT	6 cut(s)	171, 348, 463, 1027, 1806, 1981
HpyCH4V	TGCA	7 cut(s)	313, 694, 781, 1033, 1715, 1958, 2017
HpyF10VI	GCNNNNNNNGC	5 cut(s)	130, 310, 691, 1039, 1781
HpySE526I	ACGT	6 cut(s)	171, 348, 463, 1027, 1806, 1981
Hsp92I	GRCGYC	1 cut(s)	442
Hsp92II	CATG	7 cut(s)	170, 274, 594, 668, 845, 922, 1337
HspAI	GCGC	1 cut(s)	1769
Kzo9I	GATC	9 cut(s)	237, 267, 295, 796, 1052, 1689, 1708, 1916, 2022
LmnI	GCTCC	5 cut(s)	61, 684, 869, 1096, 1408
Lsp1109I	GCAGC	6 cut(s)	313, 610, 793, 975, 1192, 1970
LweI	GCATC	4 cut(s)	166, 382, 1771, 2004
MaeI	CTAG	3 cut(s)	1173, 1187, 1772
MaeII	ACGT	6 cut(s)	171, 348, 463, 1027, 1806, 1981
MaeIII	GTNAC	7 cut(s)	34, 135, 645, 1277, 1522, 1597, 1632
MalI	GATC	9 cut(s)	239, 269, 297, 798, 1054, 1691, 1710, 1918, 2024
MboI	GATC	9 cut(s)	237, 267, 295, 796, 1052, 1689, 1708, 1916, 2022
MflI	RGATCY	4 cut(s)	1052, 1708, 1916, 2022
MhlI	GDGCHC	5 cut(s)	926, 932, 1126, 1365, 1800
MluCI	AATT	6 cut(s)	182, 363, 507, 550, 807, 1316
MlyI	GAGTC	3 cut(s)	155, 539, 1156
MmeI	TCCRAC	2 cut(s)	732, 1568
MspCI	CTTAAG	1 cut(s)	1622
MspI	CCGG	8 cut(s)	69, 95, 116, 682, 926, 1394, 1535, 1914
MspR9I	CCNGG	7 cut(s)	60, 926, 927, 1210, 1394, 1790, 1926
MvaI	CCWGG	4 cut(s)	60, 1210, 1790, 1926
MwoI	GCNNNNNNNGC	5 cut(s)	130, 310, 691, 1039, 1781
NciI	CCSGG	3 cut(s)	926, 927, 1394
NdeII	GATC	9 cut(s)	237, 267, 295, 796, 1052, 1689, 1708, 1916, 2022
NheI	GCTAGC	1 cut(s)	1771
NlaIII	CATG	7 cut(s)	170, 274, 594, 668, 845, 922, 1337
NlaIV	GGNNCC	4 cut(s)	99, 1123, 1124, 1542
NmuCI	GTSAC	2 cut(s)	135, 1277
NspI	RCATGY	1 cut(s)	1337
NspV	TTCGAA	1 cut(s)	533
PinAI	ACCGGT	1 cut(s)	115
PleI	GAGTC	3 cut(s)	154, 539, 1156
PpsI	GAGTC	3 cut(s)	154, 539, 1156
PshBI	ATTAAT	1 cut(s)	810
PsiI	TTATAA	1 cut(s)	1811
Psp124BI	GAGCTC	1 cut(s)	1800
Psp1406I	AACGTT	1 cut(s)	463
Psp6I	CCWGG	4 cut(s)	58, 1208, 1788, 1924
PspEI	GGTNACC	1 cut(s)	34
PspFI	CCCAGC	1 cut(s)	675
PspGI	CCWGG	4 cut(s)	58, 1208, 1788, 1924
PspN4I	GGNNCC	4 cut(s)	99, 1123, 1124, 1542
PspOMI	GGGCCC	1 cut(s)	1122
PspPI	GGNCC	4 cut(s)	1122, 1123, 1193, 1968
PsuI	RGATCY	4 cut(s)	1052, 1708, 1916, 2022
RsaI	GTAC	2 cut(s)	120, 1256
RsaNI	GTAC	2 cut(s)	119, 1255
SacI	GAGCTC	1 cut(s)	1800
Sau3AI	GATC	9 cut(s)	237, 267, 295, 796, 1052, 1689, 1708, 1916, 2022
Sau96I	GGNCC	4 cut(s)	1122, 1123, 1193, 1968
ScaI	AGTACT	1 cut(s)	1256
SchI	GAGTC	3 cut(s)	155, 539, 1156
ScrFI	CCNGG	7 cut(s)	60, 926, 927, 1210, 1394, 1790, 1926
SduI	GDGCHC	5 cut(s)	926, 932, 1126, 1365, 1800
SfaNI	GCATC	4 cut(s)	166, 382, 1771, 2004
SfcI	CTRYAG	1 cut(s)	1197
SfuI	TTCGAA	1 cut(s)	533
SinI	GGWCC	1 cut(s)	1968
SmaI	CCCGGG	1 cut(s)	927
SmlI	CTYRAG	2 cut(s)	833, 1622
SmoI	CTYRAG	2 cut(s)	833, 1622
SrfI	GCCCGGGC	1 cut(s)	927
Sse9I	AATT	6 cut(s)	182, 363, 507, 550, 807, 1316
SsiI	CCGC	6 cut(s)	125, 128, 131, 1461, 1678, 1757
SspI	AATATT	1 cut(s)	860
SspMI	CTAG	3 cut(s)	1173, 1187, 1772
SstI	GAGCTC	1 cut(s)	1800
StyD4I	CCNGG	7 cut(s)	58, 924, 925, 1208, 1392, 1788, 1924
StyI	CCWWGG	2 cut(s)	1465, 1696
TaaI	ACNGT	2 cut(s)	1073, 1528
TaiI	ACGT	6 cut(s)	174, 351, 466, 1030, 1809, 1984
TasI	AATT	6 cut(s)	182, 363, 507, 550, 807, 1316
TatI	WGTACW	1 cut(s)	1254
TauI	GCSGC	4 cut(s)	127, 130, 133, 1680
TscAI	CASTG	4 cut(s)	109, 742, 1078, 1372
TseFI	GTSAC	2 cut(s)	135, 1277
TseI	GCWGC	6 cut(s)	301, 598, 781, 963, 1205, 1958
Tsp45I	GTSAC	2 cut(s)	135, 1277
TspDTI	ATGAA	8 cut(s)	474, 518, 653, 693, 828, 1301, 1369, 1955
TspGWI	ACGGA	4 cut(s)	139, 809, 1047, 1442
TspMI	CCCGGG	1 cut(s)	925
TspRI	CASTG	4 cut(s)	109, 742, 1078, 1372
Vha464I	CTTAAG	1 cut(s)	1622
VpaK11BI	GGWCC	1 cut(s)	1968
VspI	ATTAAT	1 cut(s)	810
XapI	RAATTY	2 cut(s)	182, 1316
XceI	RCATGY	1 cut(s)	1337
XmaI	CCCGGG	1 cut(s)	925
XspI	CTAG	3 cut(s)	1173, 1187, 1772
ZrmI	AGTACT	1 cut(s)	1256

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.