Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000157.1

Orthogroup ID

OG0012292

Physical Location & Seq

Genomic Coordinates Reverse (-)

17458 .. 23673

Gene Structure 6216 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000157.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2250 bp

atgacctcaaaaacttggccgtcacggtttaaaaacggcacacccacaaagcccaccaaagaaaaaaacactcctccacaacctcccaaaacctcacagtctcacggcgtcgccttccgttcccgccgttcaccggagcatcagagccacagagttccggcgagtatggacttagatgatctcgaagggccgagcaagcctgctcgggtctccaggttcatgccccggtccaagaacgccccaccgaaaccgaaacccgaacccgccgtcaaaaaggaacctgcaaaaccggtcccaaactccgagccggaatcgccgcagctgctaaagcccaagccggaagcactcgatgacgtggcggttctcgcagtgccggagaagaaagaagagaagcaagaagaaggcgccaatggagatgattcaaatggcgccgtgaaaatggagaccgatggagaagcgaaggaggacgacgatcctatggaagaagacgacgctgaagacaccgtcgttcgtgaaattgacgtcttctttaatcctagagtcgattccaacactcagttgtacgttttgcaatatcctctgaggcctcggtggcggccgtacgagttggagaatcggtgcgaggagataagagtgaaacctgccactgctgaagtggaggtggatttgtctctagatgtttactcgaagaattgtgatcaagagtttgctgacaggctcaaaatgacaaagcagactttggctacagaatgggatccctgccgttcaactggctatgccgttggggttttgatgggcaacaagttacacttgaatcctgttcatgcagttgttcagctccgaccatcactggagcatttaaagcctggtggctcaaaaaggaagggcaaggccacaggggatgcagaagttacagttaaaagagagatttatagtgaggaaaaatcttcggctccatcaaagaaacagaacaagcgtgtggagtcctcaactgaagatgaagagagttgggttccacttgagtaccagggctcagaaagtgatttttcagctagatatttaaaaagaatggtggtacaagaaagttctcctatagaatttacaatgactccgtatgactatgttaactctttgtgtcctagaacgtgcaaaggctcttccaaaagggctctgctaaacctgcctctggaggagcgtatccagaagttgcttgttgaggaacctatagctcgccggttcagtgatcttaagaagtactatgctcctcgtaaccaggaaaaagaacttttggatgtccttcaaaagcatggtctattgctgcgtgatctctgggttccaaaaactgcattgctatatcccaagaaagagggttcgtctagaaagaaagaagatgacaatctgcgtacagctagaaattacattctaaattcattctggaagaaccctgtaattagttattcagaactaaacgtctacccacccctaaagcctcattttgacaaaaccttgaaagtcttagctgtatacagaccttcgactcgagattggaaatttaaagagcaatcagacgtgtcatttgcagaactctatccagagatttctgaaagccaggaacagatctgggaaaggatggataaacaattggtggaagcccttaagcctcaccgtgatatgaagaatgctagcatgaatagtaagattgggaaatcaccaaattctgataaaggtcctagtaaaagtgcaagtggagttcccagtggaggagtgagaaccatgtcagatgaaacccgagcagctctacctgatgccatcaaggaagttcttcagaaacacaaggtttgcaactttcagctgatatgtgatggattacgtcatttgacagtcgacagaatgcagcatccaaaagttgatcctaagagtaaaaagttaacagctgcaaggaatggccttgaggctcctccagaagagctgcagaaagtcataacacaagttgcagtgaacattcatggttcatatgtcttgatatcatcgccagaccacccagagcatgatcagttaagggatgttgtaattaaacttcttcaaggtaagaataaagggccacttaaaaagctggatgttactatagctgctaaggaggaacttgggagggaaatcagtaataatgaatatagcaaggtcatgactgaactttgtgtgtctaaaggttctcaatggtacctgaaaagtggggatggcgggccgaaataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005666 GO:0030880 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0055029 GO:0061695 GO:0070013 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko03020 ko04623 ko05169 map00230 map00240 map03020 map04623 map05169

Pfam Domains

Protein Families

Sin_N

Protein Analysis

749

Amino Acids

84.74

Weight (kDa)

8.67

Isoelectric Point (pI)

51.14

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012292)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49530
fragaria_vesca	FvH4_1g13700 FvH4_1g13700 FvH4_2g10200
malus_domestica	MD02G1151400.v1.1 MD15G1266000.v1.1
prunus_persica	Prupe.7G151600_v2.0.a1 Prupe.7G151600_v2.0.a1
pyrus_communis	pycom02g11880
rosa_chinensis	RchiOBHm_Chr2g0102021
rosa_laevigata	RLG00000017127
rosa_multiflora	Rmu_sc0000157.1_g000006
rosa_roxburghii	Rroxscaffold_2G00140820
rosa_rugosa	Rorug02G0104100.1
rosa_samantha	Rh2AG152100 Rh2BG157500 Rh2CG157500 Rh2DG157600
rosa_wichuraiana	Rw2G011880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	525
Acc36I	ACCTGC	3 cut(s)	289, 649, 1188
Acc65I	GGTACC	1 cut(s)	2217
AccB1I	GGYRCC	3 cut(s)	404, 428, 2217
AccI	GTMKAC	3 cut(s)	1473, 1524, 1884
AciI	CCGC	6 cut(s)	124, 264, 317, 359, 595, 2238
AclWI	GGATC	4 cut(s)	467, 749, 762, 1904
AcoI	YGGCCR	2 cut(s)	17, 596
AcsI	RAATTY	4 cut(s)	1097, 1426, 1550, 1714
AcuI	CTGAAG	4 cut(s)	516, 672, 1014, 1808
AcyI	GRCGYC	4 cut(s)	108, 405, 429, 522
AfaI	GTAC	7 cut(s)	563, 602, 1025, 1077, 1256, 1405, 2219
AfiI	CCNNNNNNNGG	3 cut(s)	133, 1186, 1760
AflII	CTTAAG	2 cut(s)	1247, 1655
AflIII	ACRYGT	1 cut(s)	1569
AgeI	ACCGGT	1 cut(s)	289
AgsI	TTSAA	6 cut(s)	423, 768, 814, 1301, 1510, 2084
AjiI	CACGTC	2 cut(s)	355, 1570
AjnI	CCWGG	5 cut(s)	212, 865, 1026, 1272, 1608
Alw26I	GTCTC	4 cut(s)	105, 214, 437, 675
AlwI	GGATC	4 cut(s)	467, 749, 762, 1904
Ama87I	CYCGRG	3 cut(s)	204, 1539, 1788
AoxI	GGCC	8 cut(s)	17, 188, 584, 596, 891, 1945, 2099, 2240
ApeKI	GCWGC	8 cut(s)	319, 322, 1318, 1793, 1894, 1934, 1969, 2129
ApoI	RAATTY	4 cut(s)	1097, 1426, 1550, 1714
ArsI	GACNNNNNNTTYG	6 cut(s)	252, 284, 1294, 1326, 1559, 1591
AsiGI	ACCGGT	1 cut(s)	289
Asp700I	GAANNNNTTC	1 cut(s)	1821
Asp718I	GGTACC	1 cut(s)	2217
AspLEI	GCGC	2 cut(s)	407, 431
AspS9I	GGNCC	6 cut(s)	188, 228, 292, 1727, 2099, 2240
AsuC2I	CCSGG	1 cut(s)	226
AsuHPI	GGTGA	3 cut(s)	123, 1655, 1701
AsuNHI	GCTAGC	1 cut(s)	1682
AvaI	CYCGRG	3 cut(s)	204, 1539, 1788
AvaII	GGWCC	3 cut(s)	228, 292, 1727
BaeI	ACNNNNGTAYC	2 cut(s)	1007, 1040
BamHI	GGATCC	1 cut(s)	754
BanI	GGYRCC	3 cut(s)	404, 428, 2217
BanII	GRGCYC	2 cut(s)	1034, 1171
BarI	GAAGNNNNNNTAC	2 cut(s)	2061, 2093
BbsI	GAAGAC	3 cut(s)	492, 504, 517
BbvI	GCAGC	8 cut(s)	309, 331, 1305, 1805, 1906, 1921, 1956, 2116
BccI	CCATC	8 cut(s)	443, 787, 853, 964, 1624, 1817, 1856, 2228
BceAI	ACGGC	9 cut(s)	4, 52, 111, 121, 251, 416, 583, 747, 764
BciT130I	CCWGG	5 cut(s)	214, 867, 1028, 1274, 1610
BciVI	GTATCC	1 cut(s)	1208
BclI	TGATCA	2 cut(s)	697, 2050
BcnI	CCSGG	1 cut(s)	226
BcoDI	GTCTC	4 cut(s)	105, 214, 437, 675
BfaI	CTAG	8 cut(s)	537, 674, 1053, 1140, 1377, 1410, 1683, 1731
BfmI	CTRYAG	5 cut(s)	744, 1092, 1224, 1970, 2124
BfoI	RGCGCY	2 cut(s)	408, 432
BfrI	CTTAAG	2 cut(s)	1247, 1655
BfuAI	ACCTGC	3 cut(s)	289, 649, 1188
BfuI	GTATCC	1 cut(s)	1208
BglI	GCCNNNNNGGC	1 cut(s)	592
BglII	AGATCT	1 cut(s)	1617
BmcAI	AGTACT	1 cut(s)	1256
Bme1390I	CCNGG	6 cut(s)	214, 226, 867, 1028, 1274, 1610
Bme18I	GGWCC	3 cut(s)	228, 292, 1727
BmeT110I	CYCGRG	3 cut(s)	204, 1539, 1788
BmgBI	CACGTC	2 cut(s)	355, 1570
BmgT120I	GGNCC	6 cut(s)	188, 228, 292, 1727, 2099, 2240
BmrFI	CCNGG	6 cut(s)	214, 226, 867, 1028, 1274, 1610
BmrI	ACTGGG	1 cut(s)	1749
BmsI	GCATC	4 cut(s)	148, 892, 1795, 1906
BmtI	GCTAGC	1 cut(s)	1686
BmuI	ACTGGG	1 cut(s)	1749
BpiI	GAAGAC	3 cut(s)	492, 504, 517
BpmI	CTGGAG	4 cut(s)	196, 872, 1208, 1944
Bpu10I	CCTNAGC	1 cut(s)	2133
BpuEI	CTTGAG	2 cut(s)	1040, 1970
BpuMI	CCSGG	1 cut(s)	226
BsaBI	GATNNNNATC	1 cut(s)	1395
BsaHI	GRCGYC	4 cut(s)	108, 405, 429, 522
BsaI	GGTCTC	2 cut(s)	214, 437
BsaJI	CCNNGG	3 cut(s)	224, 587, 1027
BsaWI	WCCGGW	2 cut(s)	133, 289
BsaXI	ACNNNNNCTCC	4 cut(s)	602, 632, 1093, 1123
Bsc4I	CCNNNNNNNGG	3 cut(s)	133, 1186, 1760
Bse118I	RCCGGY	2 cut(s)	289, 1233
Bse1I	ACTGG	3 cut(s)	775, 855, 1755
Bse3DI	GCAATG	1 cut(s)	1346
Bse8I	GATNNNNATC	1 cut(s)	1395
BseBI	CCWGG	5 cut(s)	214, 867, 1028, 1274, 1610
BseDI	CCNNGG	3 cut(s)	224, 587, 1027
BseGI	GGATG	7 cut(s)	907, 1297, 1635, 1897, 2068, 2122, 2239
BseJI	GATNNNNATC	1 cut(s)	1395
BseLI	CCNNNNNNNGG	3 cut(s)	133, 1186, 1760
BseMI	GCAATG	1 cut(s)	1346
BseMII	CTCAG	3 cut(s)	569, 572, 1047
BseNI	ACTGG	3 cut(s)	775, 855, 1755
BseRI	GAGGAG	6 cut(s)	63, 638, 1205, 1254, 1776, 1947
BseX3I	CGGCCG	1 cut(s)	596
BseXI	GCAGC	8 cut(s)	309, 331, 1305, 1805, 1906, 1921, 1956, 2116
Bsh1285I	CGRYCG	1 cut(s)	599
BshFI	GGCC	8 cut(s)	19, 190, 586, 598, 893, 1947, 2101, 2242
BshNI	GGYRCC	3 cut(s)	404, 428, 2217
BshTI	ACCGGT	1 cut(s)	289
BsiEI	CGRYCG	1 cut(s)	599
BsiHKCI	CYCGRG	3 cut(s)	204, 1539, 1788
BsiSI	CCGG	8 cut(s)	134, 158, 226, 290, 308, 338, 374, 1234
BsiWI	CGTACG	1 cut(s)	600
BslFI	GGGAC	1 cut(s)	278
BslI	CCNNNNNNNGG	3 cut(s)	133, 1186, 1760
BsmAI	GTCTC	4 cut(s)	105, 214, 437, 675
BsmFI	GGGAC	1 cut(s)	278
BsmI	GAATGC	2 cut(s)	1684, 1896
BsnI	GGCC	8 cut(s)	19, 190, 586, 598, 893, 1947, 2101, 2242
Bso31I	GGTCTC	2 cut(s)	214, 437
BsoBI	CYCGRG	3 cut(s)	204, 1539, 1788
Bsp1286I	GDGCHC	2 cut(s)	1034, 1171
Bsp143I	GATC	9 cut(s)	178, 472, 697, 754, 1243, 1324, 1617, 1909, 2050
BspACI	CCGC	6 cut(s)	124, 264, 317, 359, 595, 2238
BspANI	GGCC	8 cut(s)	19, 190, 586, 598, 893, 1947, 2101, 2242
BspCNI	CTCAG	3 cut(s)	568, 573, 1046
BspHI	TCATGA	1 cut(s)	2181
BspMAI	CTGCAG	1 cut(s)	1974
BspMI	ACCTGC	3 cut(s)	289, 649, 1188
BspOI	GCTAGC	1 cut(s)	1686
BspPI	GGATC	4 cut(s)	467, 749, 762, 1904
BspQI	GCTCTTC	2 cut(s)	1162, 1959
BspT107I	GGYRCC	3 cut(s)	404, 428, 2217
BspTI	CTTAAG	2 cut(s)	1247, 1655
BspTNI	GGTCTC	2 cut(s)	214, 437
BsrDI	GCAATG	1 cut(s)	1346
BsrFI	RCCGGY	2 cut(s)	289, 1233
BsrI	ACTGG	3 cut(s)	775, 855, 1755
BssAI	RCCGGY	2 cut(s)	289, 1233
BssECI	CCNNGG	3 cut(s)	224, 587, 1027
BssMI	GATC	9 cut(s)	178, 472, 697, 754, 1243, 1324, 1617, 1909, 2050
BssNAI	GTATAC	1 cut(s)	1525
BssNI	GRCGYC	4 cut(s)	108, 405, 429, 522
Bst1107I	GTATAC	1 cut(s)	1525
Bst2UI	CCWGG	5 cut(s)	214, 867, 1028, 1274, 1610
Bst4CI	ACNGT	6 cut(s)	27, 99, 505, 916, 1667, 1882
Bst6I	CTCTTC	4 cut(s)	381, 996, 1162, 1959
BstACI	GRCGYC	4 cut(s)	108, 405, 429, 522
BstAFI	CTTAAG	2 cut(s)	1247, 1655
BstC8I	GCNNGC	5 cut(s)	197, 201, 1231, 1684, 2240
BstDEI	CTNAG	7 cut(s)	172, 555, 581, 1033, 1516, 1914, 2133
BstF5I	GGATG	7 cut(s)	907, 1297, 1635, 1897, 2068, 2122, 2239
BstH2I	RGCGCY	2 cut(s)	408, 432
BstHHI	GCGC	2 cut(s)	407, 431
BstKTI	GATC	9 cut(s)	181, 475, 700, 757, 1246, 1327, 1620, 1912, 2053
BstMAI	GTCTC	4 cut(s)	105, 214, 437, 675
BstMBI	GATC	9 cut(s)	178, 472, 697, 754, 1243, 1324, 1617, 1909, 2050
BstMCI	CGRYCG	1 cut(s)	599
BstMWI	GCNNNNNNNGC	8 cut(s)	196, 313, 322, 328, 365, 592, 862, 1180
BstNI	CCWGG	5 cut(s)	214, 867, 1028, 1274, 1610
BstSCI	CCNGG	6 cut(s)	212, 224, 865, 1026, 1272, 1608
BstSFI	CTRYAG	5 cut(s)	744, 1092, 1224, 1970, 2124
BstV1I	GCAGC	8 cut(s)	309, 331, 1305, 1805, 1906, 1921, 1956, 2116
BstV2I	GAAGAC	3 cut(s)	492, 504, 517
BstX2I	RGATCY	2 cut(s)	754, 1617
BstYI	RGATCY	2 cut(s)	754, 1617
BstZ17I	GTATAC	1 cut(s)	1525
BstZI	CGGCCG	1 cut(s)	596
BsuI	GTATCC	1 cut(s)	1208
BsuRI	GGCC	8 cut(s)	19, 190, 586, 598, 893, 1947, 2101, 2242
BtgZI	GCGATG	1 cut(s)	2013
BtrI	CACGTC	2 cut(s)	355, 1570
BtsCI	GGATG	7 cut(s)	907, 1297, 1635, 1897, 2068, 2122, 2239
BtsI	GCAGTG	3 cut(s)	375, 645, 2001
BtsIMutI	CAGTG	6 cut(s)	375, 645, 848, 1246, 1762, 2001
BveI	ACCTGC	3 cut(s)	289, 649, 1188
Cac8I	GCNNGC	5 cut(s)	197, 201, 1231, 1684, 2240
CciI	TCATGA	1 cut(s)	2181
CfoI	GCGC	2 cut(s)	407, 431
Cfr10I	RCCGGY	2 cut(s)	289, 1233
Cfr13I	GGNCC	6 cut(s)	188, 228, 292, 1727, 2099, 2240
CseI	GACGC	2 cut(s)	97, 500
Csp6I	GTAC	7 cut(s)	562, 601, 1024, 1076, 1255, 1404, 2218
CspAI	ACCGGT	1 cut(s)	289
CviAII	CATG	8 cut(s)	220, 824, 1307, 1687, 1774, 2006, 2048, 2182
CviQI	GTAC	7 cut(s)	562, 601, 1024, 1076, 1255, 1404, 2218
DdeI	CTNAG	7 cut(s)	172, 555, 581, 1033, 1516, 1914, 2133
DinI	GGCGCC	2 cut(s)	406, 430
DpnI	GATC	9 cut(s)	180, 474, 699, 756, 1245, 1326, 1619, 1911, 2052
DpnII	GATC	9 cut(s)	178, 472, 697, 754, 1243, 1324, 1617, 1909, 2050
DraI	TTTAAA	4 cut(s)	31, 861, 1062, 1555
EaeI	YGGCCR	2 cut(s)	17, 596
EagI	CGGCCG	1 cut(s)	596
Eam1104I	CTCTTC	4 cut(s)	381, 996, 1162, 1959
EarI	CTCTTC	4 cut(s)	381, 996, 1162, 1959
EclXI	CGGCCG	1 cut(s)	596
Eco147I	AGGCCT	1 cut(s)	586
Eco24I	GRGCYC	2 cut(s)	1034, 1171
Eco31I	GGTCTC	2 cut(s)	214, 437
Eco32I	GATATC	1 cut(s)	2025
Eco47I	GGWCC	3 cut(s)	228, 292, 1727
Eco52I	CGGCCG	1 cut(s)	596
Eco57I	CTGAAG	4 cut(s)	516, 672, 1014, 1808
Eco88I	CYCGRG	3 cut(s)	204, 1539, 1788
EcoO109I	RGGNCCY	1 cut(s)	1727
EcoRII	CCWGG	5 cut(s)	212, 865, 1026, 1272, 1608
EcoRV	GATATC	1 cut(s)	2025
EcoT38I	GRGCYC	2 cut(s)	1034, 1171
EgeI	GGCGCC	2 cut(s)	406, 430
EheI	GGCGCC	2 cut(s)	406, 430
FaeI	CATG	8 cut(s)	223, 827, 1310, 1690, 1777, 2009, 2051, 2185
FalI	AAGNNNNNCTT	4 cut(s)	794, 826, 2088, 2120
FaqI	GGGAC	1 cut(s)	278
FatI	CATG	8 cut(s)	219, 823, 1306, 1686, 1773, 2005, 2047, 2181
FauI	CCCGC	3 cut(s)	131, 271, 2231
FauNDI	CATATG	1 cut(s)	2014
FbaI	TGATCA	2 cut(s)	697, 2050
FblI	GTMKAC	3 cut(s)	1473, 1524, 1884
FokI	GGATG	7 cut(s)	914, 1304, 1642, 1884, 2075, 2129, 2246
FriOI	GRGCYC	2 cut(s)	1034, 1171
FspBI	CTAG	8 cut(s)	537, 674, 1053, 1140, 1377, 1410, 1683, 1731
GlaI	GCGC	2 cut(s)	406, 430
GsuI	CTGGAG	4 cut(s)	196, 872, 1208, 1944
HaeII	RGCGCY	2 cut(s)	408, 432
HaeIII	GGCC	8 cut(s)	19, 190, 586, 598, 893, 1947, 2101, 2242
HapII	CCGG	8 cut(s)	134, 158, 226, 290, 308, 338, 374, 1234
HgaI	GACGC	2 cut(s)	97, 500
HhaI	GCGC	2 cut(s)	407, 431
Hin1I	GRCGYC	4 cut(s)	108, 405, 429, 522
Hin1II	CATG	8 cut(s)	223, 827, 1310, 1690, 1777, 2009, 2051, 2185
Hin6I	GCGC	2 cut(s)	405, 429
HinP1I	GCGC	2 cut(s)	405, 429
HincII	GTYRAC	3 cut(s)	1126, 1885, 1929
HindII	GTYRAC	3 cut(s)	1126, 1885, 1929
HinfI	GANTC	9 cut(s)	311, 419, 540, 545, 613, 814, 983, 1108, 1537
HpaI	GTTAAC	2 cut(s)	1126, 1929
HpaII	CCGG	8 cut(s)	134, 158, 226, 290, 308, 338, 374, 1234
HphI	GGTGA	3 cut(s)	123, 1655, 1701
Hpy166II	GTNNAC	8 cut(s)	131, 682, 1126, 1474, 1525, 1885, 1929, 1999
Hpy8I	GTNNAC	8 cut(s)	131, 682, 1126, 1474, 1525, 1885, 1929, 1999
Hpy99I	CGWCG	4 cut(s)	113, 473, 494, 509
HpyAV	CCTTC	7 cut(s)	124, 179, 395, 454, 877, 1307, 1542
HpyCH4III	ACNGT	6 cut(s)	27, 99, 505, 916, 1667, 1882
HpyCH4IV	ACGT	7 cut(s)	354, 522, 564, 1145, 1470, 1569, 1870
HpyF10VI	GCNNNNNNNGC	8 cut(s)	196, 313, 322, 328, 365, 592, 862, 1180
HpyF3I	CTNAG	7 cut(s)	172, 555, 581, 1033, 1516, 1914, 2133
HpySE526I	ACGT	7 cut(s)	354, 522, 564, 1145, 1470, 1569, 1870
Hsp92I	GRCGYC	4 cut(s)	108, 405, 429, 522
Hsp92II	CATG	8 cut(s)	223, 827, 1310, 1690, 1777, 2009, 2051, 2185
HspAI	GCGC	2 cut(s)	405, 429
KasI	GGCGCC	2 cut(s)	404, 428
KpnI	GGTACC	1 cut(s)	2221
Ksp22I	TGATCA	2 cut(s)	697, 2050
KspAI	GTTAAC	2 cut(s)	1126, 1929
Kzo9I	GATC	9 cut(s)	178, 472, 697, 754, 1243, 1324, 1617, 1909, 2050
LguI	GCTCTTC	2 cut(s)	1162, 1959
LmnI	GCTCC	7 cut(s)	136, 843, 853, 958, 1192, 1267, 1960
Lsp1109I	GCAGC	8 cut(s)	309, 331, 1305, 1805, 1906, 1921, 1956, 2116
LweI	GCATC	4 cut(s)	148, 892, 1795, 1906
MaeI	CTAG	8 cut(s)	537, 674, 1053, 1140, 1377, 1410, 1683, 1731
MaeII	ACGT	7 cut(s)	354, 522, 564, 1145, 1470, 1569, 1870
MaeIII	GTNAC	5 cut(s)	21, 804, 910, 1268, 2119
MalI	GATC	9 cut(s)	180, 474, 699, 756, 1245, 1326, 1619, 1911, 2052
MboI	GATC	9 cut(s)	178, 472, 697, 754, 1243, 1324, 1617, 1909, 2050
MfeI	CAATTG	1 cut(s)	1640
MflI	RGATCY	2 cut(s)	754, 1617
MhlI	GDGCHC	2 cut(s)	1034, 1171
Mly113I	GGCGCC	2 cut(s)	405, 429
MlyI	GAGTC	4 cut(s)	549, 992, 1102, 1531
MmeI	TCCRAC	3 cut(s)	573, 588, 865
MroXI	GAANNNNTTC	1 cut(s)	1821
MspA1I	CMGCKG	3 cut(s)	322, 1852, 1934
MspCI	CTTAAG	2 cut(s)	1247, 1655
MspI	CCGG	8 cut(s)	134, 158, 226, 290, 308, 338, 374, 1234
MspR9I	CCNGG	6 cut(s)	214, 226, 867, 1028, 1274, 1610
MunI	CAATTG	1 cut(s)	1640
Mva1269I	GAATGC	2 cut(s)	1684, 1896
MvaI	CCWGG	5 cut(s)	214, 867, 1028, 1274, 1610
MwoI	GCNNNNNNNGC	8 cut(s)	196, 313, 322, 328, 365, 592, 862, 1180
NarI	GGCGCC	2 cut(s)	405, 429
NciI	CCSGG	1 cut(s)	226
NdeI	CATATG	1 cut(s)	2014
NdeII	GATC	9 cut(s)	178, 472, 697, 754, 1243, 1324, 1617, 1909, 2050
NheI	GCTAGC	1 cut(s)	1682
NlaIII	CATG	8 cut(s)	223, 827, 1310, 1690, 1777, 2009, 2051, 2185
NmeAIII	GCCGAG	1 cut(s)	216
NmuCI	GTSAC	1 cut(s)	21
PaeR7I	CTCGAG	1 cut(s)	1539
PagI	TCATGA	1 cut(s)	2181
PceI	AGGCCT	1 cut(s)	586
PciSI	GCTCTTC	2 cut(s)	1162, 1959
PctI	GAATGC	2 cut(s)	1684, 1896
PdmI	GAANNNNTTC	1 cut(s)	1821
PfeI	GAWTC	5 cut(s)	311, 419, 545, 613, 814
Pfl23II	CGTACG	1 cut(s)	600
PflFI	GACNNNGTC	1 cut(s)	503
PinAI	ACCGGT	1 cut(s)	289
PleI	GAGTC	4 cut(s)	548, 991, 1102, 1531
PluTI	GGCGCC	2 cut(s)	408, 432
PpsI	GAGTC	4 cut(s)	548, 991, 1102, 1531
PpuMI	RGGWCCY	1 cut(s)	1727
Psp5II	RGGWCCY	1 cut(s)	1727
Psp6I	CCWGG	5 cut(s)	212, 865, 1026, 1272, 1608
PspGI	CCWGG	5 cut(s)	212, 865, 1026, 1272, 1608
PspLI	CGTACG	1 cut(s)	600
PspPI	GGNCC	6 cut(s)	188, 228, 292, 1727, 2099, 2240
PspPPI	RGGWCCY	1 cut(s)	1727
PstI	CTGCAG	1 cut(s)	1974
PsuI	RGATCY	2 cut(s)	754, 1617
PsyI	GACNNNGTC	1 cut(s)	503
PvuII	CAGCTG	3 cut(s)	322, 1852, 1934
RsaI	GTAC	7 cut(s)	563, 602, 1025, 1077, 1256, 1405, 2219
RsaNI	GTAC	7 cut(s)	562, 601, 1024, 1076, 1255, 1404, 2218
SalI	GTCGAC	1 cut(s)	1883
SapI	GCTCTTC	2 cut(s)	1162, 1959
Sau3AI	GATC	9 cut(s)	178, 472, 697, 754, 1243, 1324, 1617, 1909, 2050
Sau96I	GGNCC	6 cut(s)	188, 228, 292, 1727, 2099, 2240
ScaI	AGTACT	1 cut(s)	1256
SchI	GAGTC	4 cut(s)	549, 992, 1102, 1531
ScrFI	CCNGG	6 cut(s)	214, 226, 867, 1028, 1274, 1610
SduI	GDGCHC	2 cut(s)	1034, 1171
SfaNI	GCATC	4 cut(s)	148, 892, 1795, 1906
SfcI	CTRYAG	5 cut(s)	744, 1092, 1224, 1970, 2124
SfoI	GGCGCC	2 cut(s)	406, 430
Sfr274I	CTCGAG	1 cut(s)	1539
SinI	GGWCC	3 cut(s)	228, 292, 1727
SlaI	CTCGAG	1 cut(s)	1539
SmlI	CTYRAG	5 cut(s)	1019, 1247, 1539, 1655, 1949
SmoI	CTYRAG	5 cut(s)	1019, 1247, 1539, 1655, 1949
SseBI	AGGCCT	1 cut(s)	586
SsiI	CCGC	6 cut(s)	124, 264, 317, 359, 595, 2238
SspDI	GGCGCC	2 cut(s)	404, 428
SspMI	CTAG	8 cut(s)	537, 674, 1053, 1140, 1377, 1410, 1683, 1731
StuI	AGGCCT	1 cut(s)	586
StyD4I	CCNGG	6 cut(s)	212, 224, 865, 1026, 1272, 1608
TaaI	ACNGT	6 cut(s)	27, 99, 505, 916, 1667, 1882
TaiI	ACGT	7 cut(s)	357, 525, 567, 1148, 1473, 1572, 1873
TaqI	TCGA	7 cut(s)	183, 348, 543, 686, 1535, 1540, 1884
TaqII	GACCGA	1 cut(s)	461
TatI	WGTACW	1 cut(s)	1254
TauI	GCSGC	2 cut(s)	319, 598
TfiI	GAWTC	5 cut(s)	311, 419, 545, 613, 814
TscAI	CASTG	6 cut(s)	375, 652, 855, 1246, 1762, 2001
TseFI	GTSAC	1 cut(s)	21
TseI	GCWGC	8 cut(s)	319, 322, 1318, 1793, 1894, 1934, 1969, 2129
Tsp45I	GTSAC	1 cut(s)	21
TspGWI	ACGGA	2 cut(s)	107, 1101
TspRI	CASTG	6 cut(s)	375, 652, 855, 1246, 1762, 2001
Tth111I	GACNNNGTC	1 cut(s)	503
Vha464I	CTTAAG	2 cut(s)	1247, 1655
VpaK11BI	GGWCC	3 cut(s)	228, 292, 1727
XapI	RAATTY	4 cut(s)	1097, 1426, 1550, 1714
XbaI	TCTAGA	2 cut(s)	673, 1376
XcmI	CCANNNNNNNNNTGG	1 cut(s)	652
XhoI	CTCGAG	1 cut(s)	1539
XmiI	GTMKAC	3 cut(s)	1473, 1524, 1884
XmnI	GAANNNNTTC	1 cut(s)	1821
XspI	CTAG	8 cut(s)	537, 674, 1053, 1140, 1377, 1410, 1683, 1731
ZraI	GACGTC	1 cut(s)	523
ZrmI	AGTACT	1 cut(s)	1256

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.