Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0012292

Physical Location & Seq

Genomic Coordinates Reverse (-)

7541216 .. 7546997

Gene Structure 5782 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g13700.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2058 bp

ATGGACCTAGACGACCTCGACGGGCCGAGCAAGCCTGCTCGGGTCTCCAGGTTCATGCCCCGTTCCAAAAACGCCCCACCAAAACCGAAGCCCGAACCCGCCGTCAAAAAGGAGCCTGCAAAACCGGTTCCGAAGTCCGAGCCGGAACCGCCGCAGCTGGTCAAGCCCAAGCCGGAAGCACTAGATGACGTGGCGGAGAAGAAAGAAGAGAAACAAGAAGAAGGCGCCTATGGAGACGATTCAAACGGCGCTGTGAAAATGGAGACCGGTGAAGAACCTAAGGACGACGACGATCCGATGGAAGAGGACGACGCTGAAGACACTGTCGTTCGTGAAATTGATGTGTTCTTTAATCCTAATGTTGATTCCAACACTCAGTTATATGTTTTGCAATATCCTCTGCGGCCTCGGTGGCGGCCGTATGAGCTGGAGGACCGGTGCGAGGAGATAAGAGTGAAGCCTGGCACTGCTGAAGTGGAGGTGGATTTGTCTATTGATCTTTACTCCAAGAACTGTGATCAAGAGTTTGCTAACAGGCTCAAAATGACAAAGCAGACTTTGGCTACAGAATGGGATCCCTGCCGTTCAACTGGTTATGCTGTCGGGGTTTTGATGGGCAACAAGTTACACTTGAATCCTGTTCATGCAGTTGTGCAGCTCCGACCATCACTTGACCATTTAAAGCCTGGTGGTTCAAAGAGGAAGGGCACGGCCACTGGGGATGCAGAAGTTGCAGTTAAAAGAGAGGAAAAATCTTTGGCTCCATCAAAGAAACAGAACAAGCGTGTGGAGTCCTCAACTGAAGATGAAGAGAGTTGGGTTCCACTTCAGTACCATGGCTCAGAAAGTGATTTTTCGGCTGGATATTTGAAAAGAATGGTGGTACAAGACAGTTCTCCTTTAGAATTTACGATGACTCCGTATGACTATGTTAACTCCTTGTGTCCTAGAACATGCAAAGGTTCTTCCAAAAGGGCTCTACTGAACCTGCCTCTGGAGGAGCGCATCCAGAAGTTGCTTGTTGAGGAACCTATAGCTCGCCGATTCAGTGATCTTAAGAAGTACTATGCTCCTCGGAACCAGGAAAAGGAACTTTTGGATGTCCTTCAAAAAAATGGTCTATTGCTGCGTGGTCTCTGGGTTCCTAAAACAGCATTGCTATATCCCAAGAAAGAGGGTTCTTCTAGAAAGAAAGATGATGATAATCTGCGTACTGCTAGAAATCACATCCTAAATTCATTCCAGAAGAACCCTGTAATTAGTTATTCAGAACTAAATGTCTACCCGCCCCTAAAGCCTCATTTTGACGAAACTTTGAAATTCTTAGCTGTCTACAGACCTTCAACTCGGGATTGGAAATTGAAAGAGCAATCAGATGTATCATTTGCAGAACTGCATCCGGATATTTCTGAAAGCCAGGAACAGATCTGGGAAAGAATGGACAAACAATTGGTGGAAGCCCTTAAGCCTCACCGTGACCTGAAGAATGCTAGCATGAGTAGTAAGACTGGGAAATTACCAAATTCTGATAAAGGTCCTAATAAAAGTGCTAGTGGAGCTCCCAGTGGAGGAGTGAGAACCATGTCAGATGAAACTCTAGCAGTTCTACCTCAGGCCATCAAGGAAGTTTTTAAGACACGCAAGGTTTGCAGCTTTCAGCTGATATGCGATACATTAGGAAACATGACTCTCGAAAGATCGCAGCATGCAAAAGTTGATCCTAATAGTAGAAAATTAACAGCCGTAAGGAATGGCCTTGCAGCTCCTCCAGAAGAGCTAAAGAACGTCATAACACAATTTGCGGTAGAGATCGGTGGTGTGTATGTCTTGAAATCGTCATCAGAGCACCCAGAGCATGATCAGCTAAGGGATGTTGTAATTAAACTTCTACAAGGTAAGAATAAAGGGCCAATTAAAAAGCTGGATGTTACGGTAGCTGCTCAGGAGGAACTTGGGAGGGAAATCAGCAATAATGAATATAACAAGGTCATGAATGAACTTTGTGTGTCCAAAGGTTCTCAATGGTACCTGAAAAGTGGGGATGGCAGTCCGAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005666 GO:0030880 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0055029 GO:0061695 GO:0070013 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko03020 ko04623 ko05169 map00230 map00240 map03020 map04623 map05169

Pfam Domains

Protein Families

Sin_N

Protein Analysis

686

Amino Acids

77.16

Weight (kDa)

6.5

Isoelectric Point (pI)

48.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RPC5	PF04801	106 - 485	1.2e-88	RPC5 protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012292)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49530
fragaria_vesca	FvH4_1g13700 FvH4_1g13700 FvH4_2g10200
malus_domestica	MD02G1151400.v1.1 MD15G1266000.v1.1
prunus_persica	Prupe.7G151600_v2.0.a1 Prupe.7G151600_v2.0.a1
pyrus_communis	pycom02g11880
rosa_chinensis	RchiOBHm_Chr2g0102021
rosa_laevigata	RLG00000017127
rosa_multiflora	Rmu_sc0000157.1_g000006
rosa_roxburghii	Rroxscaffold_2G00140820
rosa_rugosa	Rorug02G0104100.1
rosa_samantha	Rh2AG152100 Rh2BG157500 Rh2CG157500 Rh2DG157600
rosa_wichuraiana	Rw2G011880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	996
Acc65I	GGTACC	1 cut(s)	2025
AccB1I	GGYRCC	2 cut(s)	224, 2025
AccI	GTMKAC	2 cut(s)	1281, 1332
AccIII	TCCGGA	1 cut(s)	1399
AciI	CCGC	8 cut(s)	99, 149, 152, 194, 403, 415, 1286, 1802
AclWI	GGATC	4 cut(s)	287, 569, 582, 1712
AcoI	YGGCCR	2 cut(s)	416, 711
AcsI	RAATTY	4 cut(s)	905, 1234, 1319, 1522
AcuI	CTGAAG	5 cut(s)	336, 492, 812, 822, 1502
AcyI	GRCGYC	1 cut(s)	225
AfaI	GTAC	5 cut(s)	833, 885, 1064, 1213, 2027
AfiI	CCNNNNNNNGG	4 cut(s)	442, 994, 1087, 1568
AflII	CTTAAG	2 cut(s)	1055, 1463
AgeI	ACCGGT	3 cut(s)	124, 266, 435
AjiI	CACGTC	1 cut(s)	190
AjnI	CCWGG	5 cut(s)	47, 460, 685, 1080, 1416
Alw21I	GWGCWC	2 cut(s)	1561, 1848
Alw26I	GTCTC	4 cut(s)	49, 228, 257, 1139
AlwI	GGATC	4 cut(s)	287, 569, 582, 1712
Ama87I	CYCGRG	2 cut(s)	39, 1347
Aor13HI	TCCGGA	1 cut(s)	1399
AoxI	GGCC	7 cut(s)	23, 404, 416, 711, 1614, 1753, 1907
ApeKI	GCWGC	7 cut(s)	154, 655, 1126, 1650, 1702, 1760, 1937
ApoI	RAATTY	4 cut(s)	905, 1234, 1319, 1522
ArsI	GACNNNNNNTTYG	4 cut(s)	87, 119, 1102, 1134
AsiGI	ACCGGT	3 cut(s)	124, 266, 435
Asp718I	GGTACC	1 cut(s)	2025
AspLEI	GCGC	3 cut(s)	227, 251, 1005
AspS9I	GGNCC	5 cut(s)	4, 23, 433, 1535, 1907
AsuHPI	GGTGA	2 cut(s)	281, 1463
AsuNHI	GCTAGC	1 cut(s)	1490
AvaI	CYCGRG	2 cut(s)	39, 1347
AvaII	GGWCC	3 cut(s)	4, 433, 1535
AxyI	CCTNAGG	2 cut(s)	279, 1611
BaeGI	GKGCMC	1 cut(s)	710
BaeI	ACNNNNGTAYC	2 cut(s)	815, 848
BamHI	GGATCC	1 cut(s)	574
BanI	GGYRCC	2 cut(s)	224, 2025
BanII	GRGCYC	2 cut(s)	979, 1561
BarI	GAAGNNNNNNTAC	2 cut(s)	1869, 1901
BbsI	GAAGAC	1 cut(s)	324
Bbv12I	GWGCWC	2 cut(s)	1561, 1848
BbvI	GCAGC	7 cut(s)	166, 667, 1113, 1662, 1714, 1772, 1924
BccI	CCATC	6 cut(s)	292, 607, 673, 772, 1625, 2036
BceAI	ACGGC	6 cut(s)	86, 262, 403, 567, 726, 1727
BciT130I	CCWGG	5 cut(s)	49, 462, 687, 1082, 1418
BclI	TGATCA	2 cut(s)	517, 1858
BcoDI	GTCTC	4 cut(s)	49, 228, 257, 1139
BfaI	CTAG	8 cut(s)	8, 182, 948, 1185, 1218, 1491, 1551, 1598
BfmI	CTRYAG	3 cut(s)	564, 1032, 1333
BfoI	RGCGCY	2 cut(s)	228, 252
BfrI	CTTAAG	2 cut(s)	1055, 1463
BfuAI	ACCTGC	1 cut(s)	996
BglI	GCCNNNNNGGC	1 cut(s)	412
BglII	AGATCT	1 cut(s)	1425
BmcAI	AGTACT	1 cut(s)	1064
Bme1390I	CCNGG	5 cut(s)	49, 462, 687, 1082, 1418
Bme18I	GGWCC	3 cut(s)	4, 433, 1535
BmeT110I	CYCGRG	2 cut(s)	39, 1347
BmgBI	CACGTC	1 cut(s)	190
BmgT120I	GGNCC	5 cut(s)	4, 23, 433, 1535, 1907
BmrFI	CCNGG	5 cut(s)	49, 462, 687, 1082, 1418
BmrI	ACTGGG	3 cut(s)	726, 1518, 1557
BmsI	GCATC	3 cut(s)	712, 1014, 1405
BmtI	GCTAGC	1 cut(s)	1494
BmuI	ACTGGG	3 cut(s)	726, 1518, 1557
BpiI	GAAGAC	1 cut(s)	324
BpmI	CTGGAG	4 cut(s)	31, 449, 1016, 1752
Bpu10I	CCTNAGC	2 cut(s)	1865, 1941
BsaBI	GATNNNNATC	1 cut(s)	1203
BsaHI	GRCGYC	1 cut(s)	225
BsaI	GGTCTC	3 cut(s)	49, 257, 1139
BsaJI	CCNNGG	3 cut(s)	407, 835, 1073
BsaWI	WCCGGW	4 cut(s)	124, 266, 435, 1399
BsaXI	ACNNNNNCTCC	4 cut(s)	422, 452, 901, 931
Bsc4I	CCNNNNNNNGG	4 cut(s)	442, 994, 1087, 1568
Bse118I	RCCGGY	3 cut(s)	124, 266, 435
Bse1I	ACTGG	4 cut(s)	595, 721, 1513, 1563
Bse21I	CCTNAGG	2 cut(s)	279, 1611
Bse3DI	GCAATG	1 cut(s)	1154
Bse8I	GATNNNNATC	1 cut(s)	1203
BseAI	TCCGGA	1 cut(s)	1399
BseBI	CCWGG	5 cut(s)	49, 462, 687, 1082, 1418
BseDI	CCNNGG	3 cut(s)	407, 835, 1073
BseGI	GGATG	8 cut(s)	727, 1005, 1105, 1227, 1396, 1876, 1930, 2047
BseJI	GATNNNNATC	1 cut(s)	1203
BseLI	CCNNNNNNNGG	4 cut(s)	442, 994, 1087, 1568
BseMI	GCAATG	1 cut(s)	1154
BseMII	CTCAG	4 cut(s)	389, 855, 1625, 1955
BseNI	ACTGG	4 cut(s)	595, 721, 1513, 1563
BseRI	GAGGAG	5 cut(s)	458, 1013, 1062, 1584, 1755
BseSI	GKGCMC	1 cut(s)	710
BseX3I	CGGCCG	1 cut(s)	416
BseXI	GCAGC	7 cut(s)	166, 667, 1113, 1662, 1714, 1772, 1924
BsgI	GTGCAG	1 cut(s)	674
Bsh1285I	CGRYCG	1 cut(s)	419
BshFI	GGCC	7 cut(s)	25, 406, 418, 713, 1616, 1755, 1909
BshNI	GGYRCC	2 cut(s)	224, 2025
BshTI	ACCGGT	3 cut(s)	124, 266, 435
BsiEI	CGRYCG	1 cut(s)	419
BsiHKAI	GWGCWC	2 cut(s)	1561, 1848
BsiHKCI	CYCGRG	2 cut(s)	39, 1347
BsiSI	CCGG	6 cut(s)	125, 143, 173, 267, 436, 1400
BslI	CCNNNNNNNGG	4 cut(s)	442, 994, 1087, 1568
BsmAI	GTCTC	4 cut(s)	49, 228, 257, 1139
BsmBI	CGTCTC	1 cut(s)	228
BsmI	GAATGC	1 cut(s)	1492
BsnI	GGCC	7 cut(s)	25, 406, 418, 713, 1616, 1755, 1909
Bso31I	GGTCTC	3 cut(s)	49, 257, 1139
BsoBI	CYCGRG	2 cut(s)	39, 1347
Bsp1286I	GDGCHC	4 cut(s)	710, 979, 1561, 1848
Bsp13I	TCCGGA	1 cut(s)	1399
Bsp19I	CCATGG	1 cut(s)	835
BspACI	CCGC	8 cut(s)	99, 149, 152, 194, 403, 415, 1286, 1802
BspANI	GGCC	7 cut(s)	25, 406, 418, 713, 1616, 1755, 1909
BspCNI	CTCAG	4 cut(s)	388, 854, 1624, 1954
BspEI	TCCGGA	1 cut(s)	1399
BspHI	TCATGA	1 cut(s)	1989
BspMI	ACCTGC	1 cut(s)	996
BspOI	GCTAGC	1 cut(s)	1494
BspPI	GGATC	4 cut(s)	287, 569, 582, 1712
BspQI	GCTCTTC	1 cut(s)	1767
BspT107I	GGYRCC	2 cut(s)	224, 2025
BspTI	CTTAAG	2 cut(s)	1055, 1463
BspTNI	GGTCTC	3 cut(s)	49, 257, 1139
BsrDI	GCAATG	1 cut(s)	1154
BsrFI	RCCGGY	3 cut(s)	124, 266, 435
BsrI	ACTGG	4 cut(s)	595, 721, 1513, 1563
BssAI	RCCGGY	3 cut(s)	124, 266, 435
BssECI	CCNNGG	3 cut(s)	407, 835, 1073
BssNI	GRCGYC	1 cut(s)	225
BssT1I	CCWWGG	1 cut(s)	835
Bst2UI	CCWGG	5 cut(s)	49, 462, 687, 1082, 1418
Bst4CI	ACNGT	5 cut(s)	325, 515, 893, 1475, 1933
Bst6I	CTCTTC	4 cut(s)	201, 297, 804, 1767
BstACI	GRCGYC	1 cut(s)	225
BstAFI	CTTAAG	2 cut(s)	1055, 1463
BstAPI	GCANNNNNTGC	2 cut(s)	731, 1647
BstC8I	GCNNGC	6 cut(s)	32, 36, 117, 1039, 1492, 1707
BstDEI	CTNAG	7 cut(s)	279, 375, 841, 1324, 1611, 1865, 1941
BstDSI	CCRYGG	1 cut(s)	835
BstF5I	GGATG	8 cut(s)	727, 1005, 1105, 1227, 1396, 1876, 1930, 2047
BstH2I	RGCGCY	2 cut(s)	228, 252
BstHHI	GCGC	3 cut(s)	227, 251, 1005
BstMAI	GTCTC	4 cut(s)	49, 228, 257, 1139
BstMCI	CGRYCG	1 cut(s)	419
BstNI	CCWGG	5 cut(s)	49, 462, 687, 1082, 1418
BstNSI	RCATGY	2 cut(s)	957, 1709
BstSCI	CCNGG	5 cut(s)	47, 460, 685, 1080, 1416
BstSFI	CTRYAG	3 cut(s)	564, 1032, 1333
BstSLI	GKGCMC	1 cut(s)	710
BstV1I	GCAGC	7 cut(s)	166, 667, 1113, 1662, 1714, 1772, 1924
BstV2I	GAAGAC	1 cut(s)	324
BstX2I	RGATCY	2 cut(s)	574, 1425
BstYI	RGATCY	2 cut(s)	574, 1425
BstZI	CGGCCG	1 cut(s)	416
Bsu36I	CCTNAGG	2 cut(s)	279, 1611
BsuRI	GGCC	7 cut(s)	25, 406, 418, 713, 1616, 1755, 1909
BtgI	CCRYGG	1 cut(s)	835
BtrI	CACGTC	1 cut(s)	190
BtsCI	GGATG	8 cut(s)	727, 1005, 1105, 1227, 1396, 1876, 1930, 2047
BtsI	GCAGTG	1 cut(s)	465
BtsIMutI	CAGTG	5 cut(s)	321, 465, 714, 1054, 1570
BveI	ACCTGC	1 cut(s)	996
Cac8I	GCNNGC	6 cut(s)	32, 36, 117, 1039, 1492, 1707
CciI	TCATGA	1 cut(s)	1989
CfoI	GCGC	3 cut(s)	227, 251, 1005
Cfr10I	RCCGGY	3 cut(s)	124, 266, 435
Cfr13I	GGNCC	5 cut(s)	4, 23, 433, 1535, 1907
CseI	GACGC	1 cut(s)	320
Csp6I	GTAC	5 cut(s)	832, 884, 1063, 1212, 2026
CspAI	ACCGGT	3 cut(s)	124, 266, 435
CviQI	GTAC	5 cut(s)	832, 884, 1063, 1212, 2026
DdeI	CTNAG	7 cut(s)	279, 375, 841, 1324, 1611, 1865, 1941
DinI	GGCGCC	1 cut(s)	226
DraI	TTTAAA	1 cut(s)	681
EaeI	YGGCCR	2 cut(s)	416, 711
EagI	CGGCCG	1 cut(s)	416
Eam1104I	CTCTTC	4 cut(s)	201, 297, 804, 1767
EarI	CTCTTC	4 cut(s)	201, 297, 804, 1767
EciI	GGCGGA	1 cut(s)	209
Ecl136II	GAGCTC	1 cut(s)	1559
EclXI	CGGCCG	1 cut(s)	416
Eco130I	CCWWGG	1 cut(s)	835
Eco24I	GRGCYC	2 cut(s)	979, 1561
Eco31I	GGTCTC	3 cut(s)	49, 257, 1139
Eco47I	GGWCC	3 cut(s)	4, 433, 1535
Eco52I	CGGCCG	1 cut(s)	416
Eco53kI	GAGCTC	1 cut(s)	1559
Eco57I	CTGAAG	5 cut(s)	336, 492, 812, 822, 1502
Eco81I	CCTNAGG	2 cut(s)	279, 1611
Eco88I	CYCGRG	2 cut(s)	39, 1347
EcoICRI	GAGCTC	1 cut(s)	1559
EcoO109I	RGGNCCY	1 cut(s)	1535
EcoRII	CCWGG	5 cut(s)	47, 460, 685, 1080, 1416
EcoT14I	CCWWGG	1 cut(s)	835
EcoT38I	GRGCYC	2 cut(s)	979, 1561
EgeI	GGCGCC	1 cut(s)	226
EheI	GGCGCC	1 cut(s)	226
ErhI	CCWWGG	1 cut(s)	835
Esp3I	CGTCTC	1 cut(s)	228
FalI	AAGNNNNNCTT	2 cut(s)	614, 646
FauI	CCCGC	2 cut(s)	106, 1293
FbaI	TGATCA	2 cut(s)	517, 1858
FblI	GTMKAC	2 cut(s)	1281, 1332
FokI	GGATG	8 cut(s)	734, 992, 1112, 1214, 1383, 1883, 1937, 2054
FriOI	GRGCYC	2 cut(s)	979, 1561
FspBI	CTAG	8 cut(s)	8, 182, 948, 1185, 1218, 1491, 1551, 1598
GlaI	GCGC	3 cut(s)	226, 250, 1004
GsuI	CTGGAG	4 cut(s)	31, 449, 1016, 1752
HaeII	RGCGCY	2 cut(s)	228, 252
HaeIII	GGCC	7 cut(s)	25, 406, 418, 713, 1616, 1755, 1909
HapII	CCGG	6 cut(s)	125, 143, 173, 267, 436, 1400
HgaI	GACGC	1 cut(s)	320
HhaI	GCGC	3 cut(s)	227, 251, 1005
Hin1I	GRCGYC	1 cut(s)	225
Hin6I	GCGC	3 cut(s)	225, 249, 1003
HinP1I	GCGC	3 cut(s)	225, 249, 1003
HincII	GTYRAC	1 cut(s)	934
HindII	GTYRAC	1 cut(s)	934
HinfI	GANTC	7 cut(s)	239, 365, 634, 791, 916, 1044, 1687
HpaI	GTTAAC	1 cut(s)	934
HpaII	CCGG	6 cut(s)	125, 143, 173, 267, 436, 1400
HphI	GGTGA	2 cut(s)	281, 1463
Hpy166II	GTNNAC	3 cut(s)	934, 1282, 1333
Hpy8I	GTNNAC	3 cut(s)	934, 1282, 1333
Hpy99I	CGWCG	4 cut(s)	23, 290, 293, 314
HpyAV	CCTTC	4 cut(s)	215, 697, 1115, 1350
HpyCH4III	ACNGT	5 cut(s)	325, 515, 893, 1475, 1933
HpyCH4IV	ACGT	2 cut(s)	189, 1785
HpyF3I	CTNAG	7 cut(s)	279, 375, 841, 1324, 1611, 1865, 1941
HpySE526I	ACGT	2 cut(s)	189, 1785
Hsp92I	GRCGYC	1 cut(s)	225
HspAI	GCGC	3 cut(s)	225, 249, 1003
KasI	GGCGCC	1 cut(s)	224
Kpn2I	TCCGGA	1 cut(s)	1399
KpnI	GGTACC	1 cut(s)	2029
Ksp22I	TGATCA	2 cut(s)	517, 1858
KspAI	GTTAAC	1 cut(s)	934
LguI	GCTCTTC	1 cut(s)	1767
LmnI	GCTCC	8 cut(s)	112, 663, 766, 1000, 1075, 1556, 1564, 1768
Lsp1109I	GCAGC	7 cut(s)	166, 667, 1113, 1662, 1714, 1772, 1924
LweI	GCATC	3 cut(s)	712, 1014, 1405
MaeI	CTAG	8 cut(s)	8, 182, 948, 1185, 1218, 1491, 1551, 1598
MaeII	ACGT	2 cut(s)	189, 1785
MaeIII	GTNAC	3 cut(s)	624, 1475, 1927
MfeI	CAATTG	1 cut(s)	1448
MflI	RGATCY	2 cut(s)	574, 1425
MhlI	GDGCHC	4 cut(s)	710, 979, 1561, 1848
Mly113I	GGCGCC	1 cut(s)	225
MlyI	GAGTC	3 cut(s)	800, 910, 1681
MmeI	TCCRAC	2 cut(s)	393, 685
MroI	TCCGGA	1 cut(s)	1399
MspA1I	CMGCKG	2 cut(s)	157, 1660
MspCI	CTTAAG	2 cut(s)	1055, 1463
MspI	CCGG	6 cut(s)	125, 143, 173, 267, 436, 1400
MspR9I	CCNGG	5 cut(s)	49, 462, 687, 1082, 1418
MunI	CAATTG	1 cut(s)	1448
Mva1269I	GAATGC	1 cut(s)	1492
MvaI	CCWGG	5 cut(s)	49, 462, 687, 1082, 1418
NarI	GGCGCC	1 cut(s)	225
NcoI	CCATGG	1 cut(s)	835
NheI	GCTAGC	1 cut(s)	1490
NmeAIII	GCCGAG	1 cut(s)	51
NmuCI	GTSAC	1 cut(s)	1475
NspI	RCATGY	2 cut(s)	957, 1709
PaeI	GCATGC	1 cut(s)	1709
PagI	TCATGA	1 cut(s)	1989
PciSI	GCTCTTC	1 cut(s)	1767
PcsI	WCGNNNNNNNCGW	1 cut(s)	917
PctI	GAATGC	1 cut(s)	1492
PfeI	GAWTC	4 cut(s)	239, 365, 634, 1044
PflFI	GACNNNGTC	1 cut(s)	323
PinAI	ACCGGT	3 cut(s)	124, 266, 435
PleI	GAGTC	3 cut(s)	799, 910, 1681
PluTI	GGCGCC	1 cut(s)	228
PpsI	GAGTC	3 cut(s)	799, 910, 1681
PpuMI	RGGWCCY	1 cut(s)	1535
Psp124BI	GAGCTC	1 cut(s)	1561
Psp5II	RGGWCCY	1 cut(s)	1535
Psp6I	CCWGG	5 cut(s)	47, 460, 685, 1080, 1416
PspGI	CCWGG	5 cut(s)	47, 460, 685, 1080, 1416
PspPI	GGNCC	5 cut(s)	4, 23, 433, 1535, 1907
PspPPI	RGGWCCY	1 cut(s)	1535
PsuI	RGATCY	2 cut(s)	574, 1425
PsyI	GACNNNGTC	1 cut(s)	323
PvuII	CAGCTG	2 cut(s)	157, 1660
RsaI	GTAC	5 cut(s)	833, 885, 1064, 1213, 2027
RsaNI	GTAC	5 cut(s)	832, 884, 1063, 1212, 2026
SacI	GAGCTC	1 cut(s)	1561
SapI	GCTCTTC	1 cut(s)	1767
Sau96I	GGNCC	5 cut(s)	4, 23, 433, 1535, 1907
ScaI	AGTACT	1 cut(s)	1064
SchI	GAGTC	3 cut(s)	800, 910, 1681
ScrFI	CCNGG	5 cut(s)	49, 462, 687, 1082, 1418
SduI	GDGCHC	4 cut(s)	710, 979, 1561, 1848
SfaNI	GCATC	3 cut(s)	712, 1014, 1405
SfcI	CTRYAG	3 cut(s)	564, 1032, 1333
SfoI	GGCGCC	1 cut(s)	226
SinI	GGWCC	3 cut(s)	4, 433, 1535
SmlI	CTYRAG	2 cut(s)	1055, 1463
SmoI	CTYRAG	2 cut(s)	1055, 1463
SphI	GCATGC	1 cut(s)	1709
SsiI	CCGC	8 cut(s)	99, 149, 152, 194, 403, 415, 1286, 1802
SspDI	GGCGCC	1 cut(s)	224
SspMI	CTAG	8 cut(s)	8, 182, 948, 1185, 1218, 1491, 1551, 1598
SstI	GAGCTC	1 cut(s)	1561
StyD4I	CCNGG	5 cut(s)	47, 460, 685, 1080, 1416
StyI	CCWWGG	1 cut(s)	835
TaaI	ACNGT	5 cut(s)	325, 515, 893, 1475, 1933
TaiI	ACGT	2 cut(s)	192, 1788
TaqI	TCGA	2 cut(s)	18, 1692
TatI	WGTACW	1 cut(s)	1062
TauI	GCSGC	3 cut(s)	154, 406, 418
TfiI	GAWTC	4 cut(s)	239, 365, 634, 1044
TscAI	CASTG	5 cut(s)	328, 472, 721, 1054, 1570
TseFI	GTSAC	1 cut(s)	1475
TseI	GCWGC	7 cut(s)	154, 655, 1126, 1650, 1702, 1760, 1937
Tsp45I	GTSAC	1 cut(s)	1475
TspDTI	ATGAA	8 cut(s)	43, 632, 822, 1227, 1605, 1989, 2006, 2010
TspGWI	ACGGA	1 cut(s)	909
TspRI	CASTG	5 cut(s)	328, 472, 721, 1054, 1570
Tth111I	GACNNNGTC	1 cut(s)	323
Vha464I	CTTAAG	2 cut(s)	1055, 1463
VpaK11BI	GGWCC	3 cut(s)	4, 433, 1535
XapI	RAATTY	4 cut(s)	905, 1234, 1319, 1522
XbaI	TCTAGA	1 cut(s)	1184
XceI	RCATGY	2 cut(s)	957, 1709
XcmI	CCANNNNNNNNNTGG	1 cut(s)	683
XmiI	GTMKAC	2 cut(s)	1281, 1332
XspI	CTAG	8 cut(s)	8, 182, 948, 1185, 1218, 1491, 1551, 1598
ZrmI	AGTACT	1 cut(s)	1064

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.