Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0012292

Physical Location & Seq

Genomic Coordinates Reverse (-)

12486313 .. 12499303

Gene Structure 12991 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1151400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2088 bp

ATGAACCTCGAAGACCTCGATGCGACCAGCCAGGCCCCTTCCCGGCCCAACCGGTTTGTGCCCCGGTCCTCCAAGGCCAAGCCTAAACCCAAATCCGAACCCGTCGCCAAACAAGAACCGGTCCCGAAGTCCGAGCCAGAGCTCAAACCTTCACGAGAAGAACTGGACGCCCGGATTGTGAAGAAGAAAGACGAAGAAGGAAGCGCGCCGAAGGCCGAAGACTCAAATGGCGGTTTGAAAACCGAAAACGGCGACGTATCGAAAGAGGATGATCCTATGGAAGAAGACGAACTGGAAGACGAGGTCGTGCGGGAAATCGACGTCTTCTTCAATCCGAAAATCGATGACAACTCTAAGTTGTATGTATTGCAATATCCTCTGAGGCCGTGGTGGCGGCCTTACGAGTTGGAGAGCCGGTGCGAGGAGGTGAGGCTGAACCCCGCCACTTCAGAAATGGAGATTGATTTGTCTCTCGATCGGGACCCGAAGAATTTCGATGAAGATTGCGCTAGTAGATTGAAAATGACAAAGCAGACTTTGTCTACAACATGGAAGCCGCCTGGCACAAGTGGCTATGCTGTTGGTGTTTTGATGGGCAATAAGTTACACTTGAATCCTGTTCACGCGGTTGTACAGCTTCGACCCTCATTGGATCATTTGAACTCTGGTGGCTCTAAAAGGAAGAACAGTGTCAAAGGGGATGCAGAAGTTACAGTTAAGTTGGAAGACTCTGGACAAGAAAAATCCATTGGTCCATCAAAGATGCAGAACAAGCGGATGGAGTCTTCAACTGAGAAAAAAATTGAAGATGAAGAGAGTTGGGTTCCACTTCGGTATCATAGCTCAGAAAGTGACTTCTCGGCCAGATATTTACGGAAGATGGTGGGGCAAGAAAGTTCACCTATACAATTTACAATGAGCCCGCATGACTATGTTGACTCCTTATGTCCTAGAACGTGCAAAGGTTCTTCAAGAAGGTCTCTGCTTTCCCTGCCTCTGGAAGAGCGTATCAAGAAGTTGATTGTTGAGGAACCTGTAGCACGCCGGTTCAGTGATCTTAAGAAGTACTTTGCTCCCGATCACACCGCGGAAGAACTTCTGGATGTTCTTCAGAAGCATGCTCAGTTGTTGCTGTCCTCTGGTCTTTGGGTTCCAAAAACCTTATTATTATATCCAAATAAAGATGATAAAGGCTTGGATACAAATCATATATCAACTAAAGATCATAAAGATCGGCAGACAGCTAGAAATTACATCCTGAATTTATTTCGGAAGAATCCTGTAATCAGTAATTCACAGCTAGACCTCCAAGAGGGCATTAGAACTCATGTGTATGAATCCCTTAGAATGTTAGCTGTCTCAAGACCTTCCACTCAAGATTGGAAATTCAAAGAGCAACCAGATATGTCATTCATGGAACGCTACCCGGACATTGTTAAAACCCAAGAACAGAACTGGGACAGGATTGAAGAAAAGTTGAGGATAGCCTTTAAATCTAATACTGACCGTTATTTGAAGAGTGCTAGTATGACTACCACGCGTGGCAAACCACTGAATTCTGATAAAGGTACGACAAAAGCTACAAGTGAAGTTCACACTGGGGGAAGAACCATGTCAGATGAAACTCGAGCAGCTCTGCAAGAGGCTATAAAGGAGGTTTTTCAAGAACACAAGGTTTGCAACTTTCAACTGATACGTAGAGGATTAAGTGATCTGGCAGTCAGAACATCTACTCTTCCAAAGGTTGATCCTAGAAGTAAAAAAGTGACGGCTGCACAATATGGAGTTCAGGCTCCTCCACATGAGCTGCAGAAAGTAATAAGTGAAATTGCGATAGACATACATGGTTCGTATGTCTTGAAATCATCACCAGATCACCCAGAGCATGACAAATTGAGGAAGGTTGTTATGGATCTTCTATGTGCAAAAGGACCTAATGCTAAGCTTAAAAGGGGTGAGGTTTCTGAAGCAACTAAGATTTCTCTTGGGAAGGAATTCACTGCTAACGAATTCAGCAAGGTCATTAATGAGTTCTGCGTGTCCAGCGGTTCTTCATGGGTCTTAAAAAAGGGTGATGGCGGGAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005666 GO:0030880 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0055029 GO:0061695 GO:0070013 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko03020 ko04623 ko05169 map00230 map00240 map03020 map04623 map05169

Pfam Domains

Protein Families

Sin_N

Protein Analysis

696

Amino Acids

78.71

Weight (kDa)

7.95

Isoelectric Point (pI)

47.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RPC5	PF04801	99 - 494	4.1e-88	RPC5 protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012292)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49530
fragaria_vesca	FvH4_1g13700 FvH4_1g13700 FvH4_2g10200
malus_domestica	MD02G1151400.v1.1 MD15G1266000.v1.1
prunus_persica	Prupe.7G151600_v2.0.a1 Prupe.7G151600_v2.0.a1
pyrus_communis	pycom02g11880
rosa_chinensis	RchiOBHm_Chr2g0102021
rosa_laevigata	RLG00000017127
rosa_multiflora	Rmu_sc0000157.1_g000006
rosa_roxburghii	Rroxscaffold_2G00140820
rosa_rugosa	Rorug02G0104100.1
rosa_samantha	Rh2AG152100 Rh2BG157500 Rh2CG157500 Rh2DG157600
rosa_wichuraiana	Rw2G011880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	324
AccI	GTMKAC	1 cut(s)	542
AccII	CGCG	4 cut(s)	206, 626, 1088, 1540
AclWI	GGATC	4 cut(s)	266, 660, 1742, 1920
AcoI	YGGCCR	1 cut(s)	861
AcsI	RAATTY	6 cut(s)	490, 1261, 1385, 1555, 1994, 2009
AcuI	CTGAAG	3 cut(s)	432, 1094, 1986
AcyI	GRCGYC	2 cut(s)	168, 321
AfaI	GTAC	3 cut(s)	633, 1067, 1570
AfiI	CCNNNNNNNGG	4 cut(s)	42, 421, 997, 1312
AflII	CTTAAG	1 cut(s)	1058
AflIII	ACRYGT	1 cut(s)	1538
AgeI	ACCGGT	2 cut(s)	51, 118
AjnI	CCWGG	2 cut(s)	30, 559
AjuI	GAANNNNNNNTTGG	2 cut(s)	732, 764
Alw21I	GWGCWC	1 cut(s)	144
Alw26I	GTCTC	3 cut(s)	474, 984, 1363
AlwI	GGATC	4 cut(s)	266, 660, 1742, 1920
Ama87I	CYCGRG	1 cut(s)	1626
AoxI	GGCC	7 cut(s)	33, 44, 75, 213, 383, 395, 861
ApeKI	GCWGC	3 cut(s)	1631, 1772, 1807
ApoI	RAATTY	6 cut(s)	490, 1261, 1385, 1555, 1994, 2009
AseI	ATTAAT	1 cut(s)	2025
AsiGI	ACCGGT	2 cut(s)	51, 118
Asp700I	GAANNNNTTC	3 cut(s)	491, 1095, 1994
AspLEI	GCGC	3 cut(s)	206, 208, 509
AspS9I	GGNCC	7 cut(s)	34, 45, 66, 121, 481, 752, 1931
AsuC2I	CCSGG	4 cut(s)	43, 64, 172, 1427
AsuHPI	GGTGA	6 cut(s)	439, 891, 1860, 1868, 1967, 2084
AvaI	CYCGRG	1 cut(s)	1626
AvaII	GGWCC	5 cut(s)	66, 121, 481, 752, 1931
BaeGI	GKGCMC	1 cut(s)	63
BaeI	ACNNNNGTAYC	2 cut(s)	818, 851
BanII	GRGCYC	2 cut(s)	144, 923
BauI	CACGAG	1 cut(s)	153
BbsI	GAAGAC	7 cut(s)	18, 225, 291, 303, 316, 732, 777
Bbv12I	GWGCWC	1 cut(s)	144
BbvI	GCAGC	3 cut(s)	1643, 1759, 1794
BccI	CCATC	5 cut(s)	586, 763, 772, 874, 2069
BceAI	ACGGC	3 cut(s)	265, 370, 1785
BciT130I	CCWGG	2 cut(s)	32, 561
BciVI	GTATCC	1 cut(s)	1192
BcnI	CCSGG	4 cut(s)	43, 64, 172, 1427
BcoDI	GTCTC	3 cut(s)	474, 984, 1363
BfaI	CTAG	6 cut(s)	510, 951, 1245, 1301, 1524, 1752
BfmI	CTRYAG	2 cut(s)	1035, 1808
BfrI	CTTAAG	1 cut(s)	1058
BfuI	GTATCC	1 cut(s)	1192
BglI	GCCNNNNNGGC	1 cut(s)	391
BisI	GCNGC	5 cut(s)	395, 557, 1632, 1773, 1808
BlpI	GCTNAGC	1 cut(s)	1941
BlsI	GCNGC	5 cut(s)	396, 558, 1633, 1774, 1809
BmcAI	AGTACT	1 cut(s)	1067
Bme1390I	CCNGG	6 cut(s)	32, 43, 64, 172, 561, 1427
Bme18I	GGWCC	5 cut(s)	66, 121, 481, 752, 1931
BmeT110I	CYCGRG	1 cut(s)	1626
BmgT120I	GGNCC	7 cut(s)	34, 45, 66, 121, 481, 752, 1931
BmiI	GGNNCC	8 cut(s)	36, 123, 482, 483, 825, 1032, 1152, 1794
BmrFI	CCNGG	6 cut(s)	32, 43, 64, 172, 561, 1427
BmrI	ACTGGG	2 cut(s)	1465, 1608
BmsI	GCATC	3 cut(s)	10, 691, 753
BmuI	ACTGGG	2 cut(s)	1465, 1608
BpiI	GAAGAC	7 cut(s)	18, 225, 291, 303, 316, 732, 777
Bpu1102I	GCTNAGC	1 cut(s)	1941
BpuEI	CTTGAG	2 cut(s)	1345, 1359
BpuMI	CCSGG	4 cut(s)	43, 64, 172, 1427
Bsa29I	ATCGAT	1 cut(s)	342
BsaAI	YACGTR	1 cut(s)	1697
BsaBI	GATNNNNATC	1 cut(s)	1203
BsaHI	GRCGYC	2 cut(s)	168, 321
BsaI	GGTCTC	1 cut(s)	984
BsaJI	CCNNGG	4 cut(s)	62, 72, 386, 1086
BsaWI	WCCGGW	2 cut(s)	51, 118
BsaXI	ACNNNNNCTCC	2 cut(s)	401, 431
Bsc4I	CCNNNNNNNGG	4 cut(s)	42, 421, 997, 1312
Bse118I	RCCGGY	4 cut(s)	51, 118, 414, 1044
Bse1I	ACTGG	4 cut(s)	168, 297, 1460, 1603
Bse8I	GATNNNNATC	1 cut(s)	1203
BseBI	CCWGG	2 cut(s)	32, 561
BseCI	ATCGAT	1 cut(s)	342
BseDI	CCNNGG	4 cut(s)	62, 72, 386, 1086
BseGI	GGATG	5 cut(s)	274, 706, 783, 1108, 1254
BseJI	GATNNNNATC	1 cut(s)	1203
BseLI	CCNNNNNNNGG	4 cut(s)	42, 421, 997, 1312
BseMII	CTCAG	4 cut(s)	371, 783, 858, 1136
BseNI	ACTGG	4 cut(s)	168, 297, 1460, 1603
BsePI	GCGCGC	1 cut(s)	204
BseRI	GAGGAG	2 cut(s)	437, 1785
BseSI	GKGCMC	1 cut(s)	63
BseXI	GCAGC	3 cut(s)	1643, 1759, 1794
BsgI	GTGCAG	1 cut(s)	1758
Bsh1236I	CGCG	4 cut(s)	206, 626, 1088, 1540
Bsh1285I	CGRYCG	1 cut(s)	478
BshFI	GGCC	7 cut(s)	35, 46, 77, 215, 385, 397, 863
BshTI	ACCGGT	2 cut(s)	51, 118
BshVI	ATCGAT	1 cut(s)	342
BsiEI	CGRYCG	1 cut(s)	478
BsiHKAI	GWGCWC	1 cut(s)	144
BsiHKCI	CYCGRG	1 cut(s)	1626
BsiSI	CCGG	8 cut(s)	43, 52, 64, 119, 172, 415, 1045, 1427
BslFI	GGGAC	3 cut(s)	107, 494, 1472
BslI	CCNNNNNNNGG	4 cut(s)	42, 421, 997, 1312
BsmAI	GTCTC	3 cut(s)	474, 984, 1363
BsmFI	GGGAC	3 cut(s)	107, 494, 1472
BsnI	GGCC	7 cut(s)	35, 46, 77, 215, 385, 397, 863
Bso31I	GGTCTC	1 cut(s)	984
BsoBI	CYCGRG	1 cut(s)	1626
Bsp1286I	GDGCHC	3 cut(s)	63, 144, 923
Bsp1407I	TGTACA	1 cut(s)	631
Bsp1720I	GCTNAGC	1 cut(s)	1941
BspANI	GGCC	7 cut(s)	35, 46, 77, 215, 385, 397, 863
BspCNI	CTCAG	4 cut(s)	372, 784, 857, 1135
BspDI	ATCGAT	1 cut(s)	342
BspFNI	CGCG	4 cut(s)	206, 626, 1088, 1540
BspLI	GGNNCC	8 cut(s)	36, 123, 482, 483, 825, 1032, 1152, 1794
BspMAI	CTGCAG	1 cut(s)	1812
BspPI	GGATC	4 cut(s)	266, 660, 1742, 1920
BspQI	GCTCTTC	1 cut(s)	996
BspTI	CTTAAG	1 cut(s)	1058
BspTNI	GGTCTC	1 cut(s)	984
BsrFI	RCCGGY	4 cut(s)	51, 118, 414, 1044
BsrGI	TGTACA	1 cut(s)	631
BsrI	ACTGG	4 cut(s)	168, 297, 1460, 1603
BssAI	RCCGGY	4 cut(s)	51, 118, 414, 1044
BssECI	CCNNGG	4 cut(s)	62, 72, 386, 1086
BssHII	GCGCGC	1 cut(s)	204
BssNI	GRCGYC	2 cut(s)	168, 321
BssSI	CACGAG	1 cut(s)	153
BssT1I	CCWWGG	1 cut(s)	72
Bst2BI	CACGAG	1 cut(s)	153
Bst2UI	CCWGG	2 cut(s)	32, 561
Bst4CI	ACNGT	3 cut(s)	689, 715, 1508
Bst6I	CTCTTC	4 cut(s)	807, 996, 1511, 1740
BstACI	GRCGYC	2 cut(s)	168, 321
BstAFI	CTTAAG	1 cut(s)	1058
BstAUI	TGTACA	1 cut(s)	631
BstBAI	YACGTR	1 cut(s)	1697
BstC8I	GCNNGC	4 cut(s)	206, 923, 1042, 1119
BstDEI	CTNAG	8 cut(s)	354, 380, 792, 844, 1122, 1343, 1941, 1974
BstDSI	CCRYGG	2 cut(s)	386, 1086
BstENI	CCTNNNNNAGG	1 cut(s)	1310
BstF5I	GGATG	5 cut(s)	274, 706, 783, 1108, 1254
BstFNI	CGCG	4 cut(s)	206, 626, 1088, 1540
BstHHI	GCGC	3 cut(s)	206, 208, 509
BstMAI	GTCTC	3 cut(s)	474, 984, 1363
BstMCI	CGRYCG	1 cut(s)	478
BstMWI	GCNNNNNNNGC	6 cut(s)	212, 391, 570, 772, 991, 2043
BstNI	CCWGG	2 cut(s)	32, 561
BstNSI	RCATGY	1 cut(s)	1121
BstSCI	CCNGG	6 cut(s)	30, 41, 62, 170, 559, 1425
BstSFI	CTRYAG	2 cut(s)	1035, 1808
BstSLI	GKGCMC	1 cut(s)	63
BstSNI	TACGTA	1 cut(s)	1697
BstUI	CGCG	4 cut(s)	206, 626, 1088, 1540
BstV1I	GCAGC	3 cut(s)	1643, 1759, 1794
BstV2I	GAAGAC	7 cut(s)	18, 225, 291, 303, 316, 732, 777
BstX2I	RGATCY	1 cut(s)	1912
BstYI	RGATCY	1 cut(s)	1912
Bsu15I	ATCGAT	1 cut(s)	342
BsuI	GTATCC	1 cut(s)	1192
BsuRI	GGCC	7 cut(s)	35, 46, 77, 215, 385, 397, 863
BsuTUI	ATCGAT	1 cut(s)	342
BtgI	CCRYGG	2 cut(s)	386, 1086
BtsCI	GGATG	5 cut(s)	274, 706, 783, 1108, 1254
BtsI	GCAGTG	1 cut(s)	1998
BtsIMutI	CAGTG	5 cut(s)	694, 1057, 1550, 1596, 1998
Cac8I	GCNNGC	4 cut(s)	206, 923, 1042, 1119
CfoI	GCGC	3 cut(s)	206, 208, 509
Cfr10I	RCCGGY	4 cut(s)	51, 118, 414, 1044
Cfr13I	GGNCC	7 cut(s)	34, 45, 66, 121, 481, 752, 1931
Cfr42I	CCGCGG	1 cut(s)	1089
ClaI	ATCGAT	1 cut(s)	342
CseI	GACGC	1 cut(s)	176
Csp6I	GTAC	3 cut(s)	632, 1066, 1569
CspAI	ACCGGT	2 cut(s)	51, 118
CviQI	GTAC	3 cut(s)	632, 1066, 1569
DdeI	CTNAG	8 cut(s)	354, 380, 792, 844, 1122, 1343, 1941, 1974
DraI	TTTAAA	1 cut(s)	1492
EaeI	YGGCCR	1 cut(s)	861
Eam1104I	CTCTTC	4 cut(s)	807, 996, 1511, 1740
EarI	CTCTTC	4 cut(s)	807, 996, 1511, 1740
Ecl136II	GAGCTC	1 cut(s)	142
Eco105I	TACGTA	1 cut(s)	1697
Eco130I	CCWWGG	1 cut(s)	72
Eco24I	GRGCYC	2 cut(s)	144, 923
Eco31I	GGTCTC	1 cut(s)	984
Eco47I	GGWCC	5 cut(s)	66, 121, 481, 752, 1931
Eco53kI	GAGCTC	1 cut(s)	142
Eco57I	CTGAAG	3 cut(s)	432, 1094, 1986
Eco88I	CYCGRG	1 cut(s)	1626
EcoICRI	GAGCTC	1 cut(s)	142
EcoNI	CCTNNNNNAGG	1 cut(s)	1310
EcoO109I	RGGNCCY	3 cut(s)	34, 481, 1931
EcoRI	GAATTC	3 cut(s)	1555, 1994, 2009
EcoRII	CCWGG	2 cut(s)	30, 559
EcoT14I	CCWWGG	1 cut(s)	72
EcoT38I	GRGCYC	2 cut(s)	144, 923
ErhI	CCWWGG	1 cut(s)	72
FalI	AAGNNNNNCTT	4 cut(s)	593, 625, 1052, 1084
FaqI	GGGAC	3 cut(s)	107, 494, 1472
FauI	CCCGC	4 cut(s)	303, 448, 930, 2072
FblI	GTMKAC	1 cut(s)	542
Fnu4HI	GCNGC	5 cut(s)	395, 557, 1632, 1773, 1808
FokI	GGATG	5 cut(s)	281, 713, 790, 1115, 1241
FriOI	GRGCYC	2 cut(s)	144, 923
Fsp4HI	GCNGC	5 cut(s)	395, 557, 1632, 1773, 1808
FspBI	CTAG	6 cut(s)	510, 951, 1245, 1301, 1524, 1752
GlaI	GCGC	3 cut(s)	205, 207, 508
GluI	GCNGC	5 cut(s)	395, 557, 1632, 1773, 1808
HaeIII	GGCC	7 cut(s)	35, 46, 77, 215, 385, 397, 863
HapII	CCGG	8 cut(s)	43, 52, 64, 119, 172, 415, 1045, 1427
HgaI	GACGC	1 cut(s)	176
HhaI	GCGC	3 cut(s)	206, 208, 509
Hin1I	GRCGYC	2 cut(s)	168, 321
Hin6I	GCGC	3 cut(s)	204, 206, 507
HinP1I	GCGC	3 cut(s)	204, 206, 507
HincII	GTYRAC	1 cut(s)	937
HindII	GTYRAC	1 cut(s)	937
HindIII	AAGCTT	1 cut(s)	1943
HinfI	GANTC	7 cut(s)	221, 613, 728, 782, 938, 1276, 1337
HpaII	CCGG	8 cut(s)	43, 52, 64, 119, 172, 415, 1045, 1427
HphI	GGTGA	6 cut(s)	439, 891, 1860, 1868, 1967, 2084
Hpy166II	GTNNAC	5 cut(s)	543, 622, 899, 937, 1594
Hpy8I	GTNNAC	5 cut(s)	543, 622, 899, 937, 1594
Hpy99I	CGWCG	3 cut(s)	107, 257, 323
HpyAV	CCTTC	8 cut(s)	48, 159, 191, 205, 969, 1377, 1894, 1984
HpyCH4III	ACNGT	3 cut(s)	689, 715, 1508
HpyCH4IV	ACGT	4 cut(s)	255, 321, 956, 1696
HpyCH4V	TGCA	9 cut(s)	370, 704, 766, 960, 1639, 1680, 1775, 1810, 1925
HpyF10VI	GCNNNNNNNGC	6 cut(s)	212, 391, 570, 772, 991, 2043
HpyF3I	CTNAG	8 cut(s)	354, 380, 792, 844, 1122, 1343, 1941, 1974
HpySE526I	ACGT	4 cut(s)	255, 321, 956, 1696
Hsp92I	GRCGYC	2 cut(s)	168, 321
HspAI	GCGC	3 cut(s)	204, 206, 507
KflI	GGGWCCC	1 cut(s)	481
KspI	CCGCGG	1 cut(s)	1089
LguI	GCTCTTC	1 cut(s)	996
LmnI	GCTCC	2 cut(s)	1078, 1798
Lsp1109I	GCAGC	3 cut(s)	1643, 1759, 1794
LweI	GCATC	3 cut(s)	10, 691, 753
MaeI	CTAG	6 cut(s)	510, 951, 1245, 1301, 1524, 1752
MaeII	ACGT	4 cut(s)	255, 321, 956, 1696
MaeIII	GTNAC	4 cut(s)	603, 709, 851, 1765
MflI	RGATCY	1 cut(s)	1912
MhlI	GDGCHC	3 cut(s)	63, 144, 923
MluI	ACGCGT	1 cut(s)	1538
MlyI	GAGTC	4 cut(s)	215, 722, 791, 932
MmeI	TCCRAC	2 cut(s)	387, 702
MroXI	GAANNNNTTC	3 cut(s)	491, 1095, 1994
MseI	TTAA	8 cut(s)	717, 1059, 1437, 1491, 1706, 1947, 2025, 2063
MslI	CAYNNNNRTG	2 cut(s)	930, 1332
MspA1I	CMGCKG	2 cut(s)	1088, 2046
MspCI	CTTAAG	1 cut(s)	1058
MspI	CCGG	8 cut(s)	43, 52, 64, 119, 172, 415, 1045, 1427
MspR9I	CCNGG	6 cut(s)	32, 43, 64, 172, 561, 1427
MvaI	CCWGG	2 cut(s)	32, 561
MvnI	CGCG	4 cut(s)	206, 626, 1088, 1540
MwoI	GCNNNNNNNGC	6 cut(s)	212, 391, 570, 772, 991, 2043
NciI	CCSGG	4 cut(s)	43, 64, 172, 1427
NlaIV	GGNNCC	8 cut(s)	36, 123, 482, 483, 825, 1032, 1152, 1794
NmeAIII	GCCGAG	1 cut(s)	839
NmuCI	GTSAC	2 cut(s)	851, 1765
NspI	RCATGY	1 cut(s)	1121
PaeI	GCATGC	1 cut(s)	1121
PaeR7I	CTCGAG	1 cut(s)	1626
PauI	GCGCGC	1 cut(s)	204
PciSI	GCTCTTC	1 cut(s)	996
PcsI	WCGNNNNNNNCGW	1 cut(s)	15
PdmI	GAANNNNTTC	3 cut(s)	491, 1095, 1994
PfeI	GAWTC	3 cut(s)	613, 1276, 1337
PflFI	GACNNNGTC	2 cut(s)	302, 538
PinAI	ACCGGT	2 cut(s)	51, 118
PkrI	GCNGC	5 cut(s)	396, 558, 1633, 1774, 1809
Ple19I	CGATCG	1 cut(s)	478
PleI	GAGTC	4 cut(s)	215, 722, 790, 932
PpsI	GAGTC	4 cut(s)	215, 722, 790, 932
Ppu21I	YACGTR	1 cut(s)	1697
PpuMI	RGGWCCY	2 cut(s)	481, 1931
PshBI	ATTAAT	1 cut(s)	2025
Psp124BI	GAGCTC	1 cut(s)	144
Psp5II	RGGWCCY	2 cut(s)	481, 1931
Psp6I	CCWGG	2 cut(s)	30, 559
PspGI	CCWGG	2 cut(s)	30, 559
PspN4I	GGNNCC	8 cut(s)	36, 123, 482, 483, 825, 1032, 1152, 1794
PspPI	GGNCC	7 cut(s)	34, 45, 66, 121, 481, 752, 1931
PspPPI	RGGWCCY	2 cut(s)	481, 1931
PspXI	VCTCGAGB	1 cut(s)	1626
PstI	CTGCAG	1 cut(s)	1812
PsuI	RGATCY	1 cut(s)	1912
PsyI	GACNNNGTC	2 cut(s)	302, 538
PteI	GCGCGC	1 cut(s)	204
PvuI	CGATCG	1 cut(s)	478
RsaI	GTAC	3 cut(s)	633, 1067, 1570
RsaNI	GTAC	3 cut(s)	632, 1066, 1569
RseI	CAYNNNNRTG	2 cut(s)	930, 1332
SacI	GAGCTC	1 cut(s)	144
SacII	CCGCGG	1 cut(s)	1089
SapI	GCTCTTC	1 cut(s)	996
SaqAI	TTAA	8 cut(s)	717, 1059, 1437, 1491, 1706, 1947, 2025, 2063
SatI	GCNGC	5 cut(s)	395, 557, 1632, 1773, 1808
Sau96I	GGNCC	7 cut(s)	34, 45, 66, 121, 481, 752, 1931
ScaI	AGTACT	1 cut(s)	1067
SchI	GAGTC	4 cut(s)	215, 722, 791, 932
ScrFI	CCNGG	6 cut(s)	32, 43, 64, 172, 561, 1427
SduI	GDGCHC	3 cut(s)	63, 144, 923
SfaNI	GCATC	3 cut(s)	10, 691, 753
SfcI	CTRYAG	2 cut(s)	1035, 1808
Sfr274I	CTCGAG	1 cut(s)	1626
Sfr303I	CCGCGG	1 cut(s)	1089
SgrBI	CCGCGG	1 cut(s)	1089
SinI	GGWCC	5 cut(s)	66, 121, 481, 752, 1931
SlaI	CTCGAG	1 cut(s)	1626
SmiMI	CAYNNNNRTG	2 cut(s)	930, 1332
SmlI	CTYRAG	4 cut(s)	1058, 1360, 1374, 1626
SmoI	CTYRAG	4 cut(s)	1058, 1360, 1374, 1626
SnaBI	TACGTA	1 cut(s)	1697
SphI	GCATGC	1 cut(s)	1121
SspMI	CTAG	6 cut(s)	510, 951, 1245, 1301, 1524, 1752
SstI	GAGCTC	1 cut(s)	144
StyD4I	CCNGG	6 cut(s)	30, 41, 62, 170, 559, 1425
StyI	CCWWGG	1 cut(s)	72
TaaI	ACNGT	3 cut(s)	689, 715, 1508
TaiI	ACGT	4 cut(s)	258, 324, 959, 1699
TaqI	TCGA	9 cut(s)	9, 18, 260, 318, 342, 474, 495, 640, 1627
TatI	WGTACW	2 cut(s)	631, 1065
TauI	GCSGC	2 cut(s)	397, 559
TfiI	GAWTC	3 cut(s)	613, 1276, 1337
Tru1I	TTAA	8 cut(s)	717, 1059, 1437, 1491, 1706, 1947, 2025, 2063
Tru9I	TTAA	8 cut(s)	717, 1059, 1437, 1491, 1706, 1947, 2025, 2063
TscAI	CASTG	5 cut(s)	694, 1057, 1557, 1603, 2005
TseFI	GTSAC	2 cut(s)	851, 1765
TseI	GCWGC	3 cut(s)	1631, 1772, 1807
Tsp45I	GTSAC	2 cut(s)	851, 1765
TspDTI	ATGAA	7 cut(s)	17, 513, 825, 1350, 1402, 1635, 2043
TspGWI	ACGGA	1 cut(s)	889
TspRI	CASTG	5 cut(s)	694, 1057, 1557, 1603, 2005
Tth111I	GACNNNGTC	2 cut(s)	302, 538
Vha464I	CTTAAG	1 cut(s)	1058
VpaK11BI	GGWCC	5 cut(s)	66, 121, 481, 752, 1931
VspI	ATTAAT	1 cut(s)	2025
XagI	CCTNNNNNAGG	1 cut(s)	1310
XapI	RAATTY	6 cut(s)	490, 1261, 1385, 1555, 1994, 2009
XceI	RCATGY	1 cut(s)	1121
XcmI	CCANNNNNNNNNTGG	1 cut(s)	451
XhoI	CTCGAG	1 cut(s)	1626
XmiI	GTMKAC	1 cut(s)	542
XmnI	GAANNNNTTC	3 cut(s)	491, 1095, 1994
XspI	CTAG	6 cut(s)	510, 951, 1245, 1301, 1524, 1752
ZraI	GACGTC	1 cut(s)	322
ZrmI	AGTACT	1 cut(s)	1067

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.