AT5G51430

Golgi complex component 7 (COG7)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0012118
Physical Location & Seq
Reverse (-)
20886745 .. 20891007
4263 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G51430.1

Sequence Viewer

Length: 2511 bp
ATGATGCTGGATCTAGGTCCATTCTCAGATGAGAAGTTCGATGCGAAGCGATGGGTTAACTCGTCGTGCCAGGCGCGTCACCCACAGGATTCACTCGAGAAACATCTTGTGGATCTGGAAATGAAGCTTCAGATTGCCTCCGAGGAGATCGGAGCTTCTCTTGAAGAGCAGAGCGGTGGTGCTCTCCTCCGTGTTCCTCGTGCCACACGAGACGTGTTGCGTCTCCGTGATGATGCTGTGTCTCTGCGTGGTTCTGTTGCTGGAATCCTCCAGAAGCTCAAGAAGGCAGAGGGTTCTTCAGCAGATTGTATAGCTGCGCTTGCTAGAGTGGACAATGTCAAACAGAGAATGGAGGCTGCCTACAAAACACTACAGGATGCTGCAGGGTTAACTCAGTTAAGCTCGACGGTTGAGGATGTATTTGCTAGTGGCGATCTTCCTCGTGCTGCAGAAACTCTTGCTAGCATGCGAAATTGCCTGTCTGCTGTTGGAGAGGTTGCAGAATTTGCTAATGTGAGAAAGCAACTAGAGGTATTGGAAGATAGGCTGGAGGCGATGGTGCAGCCACGTCTTACTGATGCATTAACATATCACAAGGTTGATGTCGCCCAAGATTTGCGAGTAATTCTCATCCGGATTGGGAGATTCAAGTCTCTGGAGTTGCAATATTCAAAAGTCCGTCTAAAGCCGATTAAACAACTCTGGGAAGATTTTGACACAAAGCAAAGGGCAAACAAGCTTGCCAATGAGAGAAGTGAAAGTCAAAGGTTGTCTAGCGGCGATGAGTTTCAGTCGACATCATCTCAGACATCATTTGCCAGTTGGCTGACAAGCTTTTACGACGAGTTGCTACTCTATCTTGAGCAAGAGTGGAAATGGTGTATGGTTGCCTTCCCTGATGACTACATGACTCTCGTCCCAAAGCTGTTGGTTGAGACCATGGGAGTACTGGGGGCTAGTTTTGTTTCTCGTCTTAACCTTGCAACTGGAGATGCTGTTCCTGAAACAAAAGCACTCGCCAAAGGTGTGATGGATCTATTATCTGGAGACTTGCCCAAGGGTATTAATATTCAGACCAAGCATCTTGAGGCTCTGATTGAACTGCACAACGTAACTGGTTCCTTTGCAAGAAATATTCAGCACCTGTTTGCGGAATCTGAACTTAGGATCTTAATAGATACGCTGAAGGCCGTGTACTCACCCTTTGAATCGTTTAAGCAAAAGTATGGGAAGATGGAACGTGCTATTTTATCCTCTGAGATTGCAGTGGTGGATCTGAGAGGGGCTGTTACTCGTGGTGTTGGGGCTCAAGGAATTGAACTCAGTGAAACAGTGCGTAGGATGGAAGAGTCTATTCCCCAAGTTGTTGTTCTTCTTGAAGCTGCAGTTGAAAGGTGTATTGGCTTTACTGGAGGGTCAGAGGCAGACGAGCTGATACTTGCATTAGATGACATAATGTTGCAGTATATCTCTATGCTTCAAGAAACACTCAAATCTTTGAGAGTTGTGTGTGGAGTGGATGGTACAGGTGATGGAGTTGGCTCAAAGAAAGATGCAAGTGCAGAGAAAAGGGAGAGCTCTCGCAAGATGGATTTGACTTCAAATGAGGAATGGTCCATTGTTCAAGGAGCACTTCAAATTCTTACTGTAGCTGATTGTCTCACGAGCAGGTCTTCTGTCTTTGAAGCCTCTTTGAGAGCAACTCTAGCTAGACTAAACTCCAGCTTGTCTATTTCATTATTTGGCACAAATTTGGATCACAACCTATCACATTTGAAAAGTGAACAAACTGCTGGAGATTTGTCTATGGCTGGACGAGCTTCCATGGATGTGGCAGCTATTCGGTTGGTTGATGTTCCGGAGAAGGCTCACAAACTATTAAACCTATTGGAGCAGTCCAAAGATCCACGATTCCACGCACTGCCTTTGGCGTCTCAGAGAGTTGCTGCATTTGCCGACACAGTCAATGAACTTGTCTATGACGTCCTTATATCAAAAGTCAGGCAACGTCTAGGGGAAGTATCTCGCCTACCAATCTGGTCTTCCGTCGAGGAACAAACTGCTTTTCCTCTACCAAATTTCAGCTCATACCCGCAGTCTTATGTTACAAGTGTTGGAGAATATCTCCTTACTTTGCCGCAGCAGCTTGAGCCTCTAGCTGAAGGCATCTCAACCAACGGCGATTCAAACAACGAGGATGCACAATTCTTTGCAACCGAATGGATGTTCAAGGTAGCAGAAGGAGCAACCGCTCTGTACATGGACCAATTGAGAGGAATCCAATACATTTCAGACCGAGGAGCACAACAACTCTCTGTAGATATTGAGTACTTGAGCAATGTGCTTTCGGCTCTGTCCATGCCAATTCCGCCAGTTCTTGCAACTTTTCAGACGTGTTTGGCTACACCGAGAGGTGAGCTCAAAGATGTGATGAAATCAGAAGCTGGTAATGAACTCGACTGCCCTACAGCTAATCTTGTTTGTAAGATGCGTCGTATCAGTTTCGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
COG7

Protein Analysis

836

Amino Acids

92.26

Weight (kDa)

5.1

Isoelectric Point (pI)

43.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
COG7 PF10191 4 - 832 0.0 Golgi complex component 7 (COG7)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012118)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G51430
fragaria_vesca FvH4_7g19100 FvH4_7g27490
malus_domestica MD01G1182800.v1.1 MD07G1253700.v1.1
prunus_persica Prupe.2G277000_v2.0.a1
pyrus_communis pycom01g19300 pycom07g22640
rosa_chinensis RchiOBHm_Chr1g0374281
rosa_laevigata RLG00000026746
rosa_multiflora Rmu_ssc0000007.1_g000022
rosa_roxburghii Rroxscaffold_4G00283580
rosa_rugosa Rorug01G0382700
rosa_samantha Rh1AG393300 Rh1CG370500 Rh1CG371100 Rh1DG387900 Rh1DG388500
rosa_wichuraiana Rw1G034080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1986
Acc36I ACCTGC 1 cut(s) 1659
AccBSI CCGCTC 2 cut(s) 174, 2252
AccI GTMKAC 1 cut(s) 794
AccII CGCG 1 cut(s) 76
AccIII TCCGGA 2 cut(s) 633, 1858
AciI CCGC 7 cut(s) 174, 777, 1151, 2093, 2138, 2250, 2369
AclWI GGATC 7 cut(s) 18, 120, 1041, 1175, 1281, 1764, 1898
AcsI RAATTY 4 cut(s) 503, 1638, 1750, 2077
AcuI CTGAAG 4 cut(s) 113, 282, 1205, 2181
AcyI GRCGYC 2 cut(s) 1931, 1983
AfaI GTAC 5 cut(s) 948, 1196, 1525, 2258, 2330
AfiI CCNNNNNNNGG 1 cut(s) 1150
AflIII ACRYGT 2 cut(s) 213, 2393
AjiI CACGTC 3 cut(s) 214, 569, 2394
AjnI CCWGG 1 cut(s) 69
AjuI GAANNNNNNNTTGG 6 cut(s) 1353, 1383, 1385, 1415, 2026, 2058
AloI GAACNNNNNNTCC 2 cut(s) 981, 1013
Alw21I GWGCWC 5 cut(s) 184, 1580, 1633, 2305, 2421
Alw26I GTCTC 8 cut(s) 204, 227, 246, 657, 929, 1041, 1664, 1938
AlwI GGATC 7 cut(s) 18, 120, 1041, 1175, 1281, 1764, 1898
AlwNI CAGNNNCTG 2 cut(s) 1144, 2444
Ama87I CYCGRG 1 cut(s) 95
Aor13HI TCCGGA 2 cut(s) 633, 1858
AoxI GGCC 1 cut(s) 1188
ApoI RAATTY 4 cut(s) 503, 1638, 1750, 2077
AseI ATTAAT 1 cut(s) 1065
AspLEI GCGC 2 cut(s) 76, 319
AspS9I GGNCC 3 cut(s) 17, 1614, 2263
AsuHPI GGTGA 4 cut(s) 71, 1191, 1541, 2426
AsuNHI GCTAGC 1 cut(s) 461
AvaI CYCGRG 1 cut(s) 95
AvaII GGWCC 3 cut(s) 17, 1614, 2263
BanII GRGCYC 3 cut(s) 1309, 1580, 2421
BarI GAAGNNNNNNTAC 2 cut(s) 1178, 1210
BauI CACGAG 5 cut(s) 198, 207, 441, 1293, 1663
BbsI GAAGAC 2 cut(s) 1665, 2034
Bbv12I GWGCWC 5 cut(s) 184, 1580, 1633, 2305, 2421
BccI CCATC 8 cut(s) 45, 550, 1024, 1228, 1336, 1514, 1526, 1582
BceAI ACGGC 2 cut(s) 1175, 2194
BciT130I CCWGG 1 cut(s) 71
BcoDI GTCTC 8 cut(s) 204, 227, 246, 657, 929, 1041, 1664, 1938
BfmI CTRYAG 7 cut(s) 371, 381, 447, 1383, 1647, 2316, 2466
BfuAI ACCTGC 1 cut(s) 1659
BmcAI AGTACT 2 cut(s) 948, 2330
Bme1390I CCNGG 1 cut(s) 71
Bme18I GGWCC 3 cut(s) 17, 1614, 2263
BmeT110I CYCGRG 1 cut(s) 95
BmgBI CACGTC 3 cut(s) 214, 569, 2394
BmgT120I GGNCC 3 cut(s) 17, 1614, 2263
BmiI GGNNCC 1 cut(s) 1120
BmrFI CCNGG 1 cut(s) 71
BmrI ACTGGG 1 cut(s) 959
BmtI GCTAGC 1 cut(s) 465
BmuI ACTGGG 1 cut(s) 959
BoxI GACNNNNGTC 1 cut(s) 914
BpiI GAAGAC 2 cut(s) 1665, 2034
BplI GAGNNNNNCTC 8 cut(s) 612, 644, 1687, 1719, 2109, 2141, 2403, 2435
BpmI CTGGAG 8 cut(s) 254, 569, 677, 1008, 1065, 1431, 1705, 1815
BpuEI CTTGAG 6 cut(s) 263, 881, 1106, 1293, 2168, 2353
BsaHI GRCGYC 2 cut(s) 1931, 1983
BsaI GGTCTC 1 cut(s) 929
BsaJI CCNNGG 5 cut(s) 141, 939, 1056, 1824, 2296
BsaWI WCCGGW 2 cut(s) 633, 1858
BsaXI ACNNNNNCTCC 2 cut(s) 981, 1011
Bsc4I CCNNNNNNNGG 1 cut(s) 1150
Bse1I ACTGG 6 cut(s) 819, 954, 991, 1120, 1414, 2372
Bse3DI GCAATG 1 cut(s) 2344
BseAI TCCGGA 2 cut(s) 633, 1858
BseBI CCWGG 1 cut(s) 71
BseDI CCNNGG 5 cut(s) 141, 939, 1056, 1824, 2296
BseGI GGATG 8 cut(s) 382, 421, 630, 1347, 1525, 1834, 2203, 2229
BseLI CCNNNNNNNGG 1 cut(s) 1150
BseMI GCAATG 1 cut(s) 2344
BseMII CTCAG 7 cut(s) 39, 407, 818, 1248, 1268, 1336, 1949
BseNI ACTGG 6 cut(s) 819, 954, 991, 1120, 1414, 2372
BseRI GAGGAG 3 cut(s) 158, 176, 2313
BsgI GTGCAG 3 cut(s) 581, 1088, 1581
Bsh1236I CGCG 1 cut(s) 76
BshFI GGCC 1 cut(s) 1190
BsiHKAI GWGCWC 5 cut(s) 184, 1580, 1633, 2305, 2421
BsiHKCI CYCGRG 1 cut(s) 95
BsiSI CCGG 2 cut(s) 634, 1859
BslFI GGGAC 1 cut(s) 902
BslI CCNNNNNNNGG 1 cut(s) 1150
BsmAI GTCTC 8 cut(s) 204, 227, 246, 657, 929, 1041, 1664, 1938
BsmBI CGTCTC 3 cut(s) 204, 227, 1938
BsmFI GGGAC 1 cut(s) 902
BsnI GGCC 1 cut(s) 1190
Bso31I GGTCTC 1 cut(s) 929
BsoBI CYCGRG 1 cut(s) 95
Bsp1286I GDGCHC 6 cut(s) 184, 1309, 1580, 1633, 2305, 2421
Bsp13I TCCGGA 2 cut(s) 633, 1858
Bsp1407I TGTACA 1 cut(s) 2256
Bsp143I GATC 9 cut(s) 10, 112, 147, 433, 1033, 1167, 1273, 1756, 1903
Bsp19I CCATGG 2 cut(s) 939, 1824
BspACI CCGC 7 cut(s) 174, 777, 1151, 2093, 2138, 2250, 2369
BspANI GGCC 1 cut(s) 1190
BspCNI CTCAG 7 cut(s) 38, 406, 817, 1249, 1269, 1335, 1948
BspEI TCCGGA 2 cut(s) 633, 1858
BspFNI CGCG 1 cut(s) 76
BspLI GGNNCC 1 cut(s) 1120
BspMAI CTGCAG 3 cut(s) 385, 451, 1387
BspMI ACCTGC 1 cut(s) 1659
BspOI GCTAGC 1 cut(s) 465
BspPI GGATC 7 cut(s) 18, 120, 1041, 1175, 1281, 1764, 1898
BspQI GCTCTTC 1 cut(s) 159
BspTNI GGTCTC 1 cut(s) 929
BsrBI CCGCTC 2 cut(s) 174, 2252
BsrDI GCAATG 1 cut(s) 2344
BsrGI TGTACA 1 cut(s) 2256
BsrI ACTGG 6 cut(s) 819, 954, 991, 1120, 1414, 2372
BssECI CCNNGG 5 cut(s) 141, 939, 1056, 1824, 2296
BssMI GATC 9 cut(s) 10, 112, 147, 433, 1033, 1167, 1273, 1756, 1903
BssNI GRCGYC 2 cut(s) 1931, 1983
BssSI CACGAG 5 cut(s) 198, 207, 441, 1293, 1663
BssT1I CCWWGG 3 cut(s) 939, 1056, 1824
Bst2BI CACGAG 5 cut(s) 198, 207, 441, 1293, 1663
Bst2UI CCWGG 1 cut(s) 71
Bst4CI ACNGT 4 cut(s) 409, 1333, 1648, 1963
Bst6I CTCTTC 2 cut(s) 159, 1341
BstACI GRCGYC 2 cut(s) 1931, 1983
BstAPI GCANNNNNTGC 1 cut(s) 506
BstAUI TGTACA 1 cut(s) 2256
BstC8I GCNNGC 4 cut(s) 321, 463, 467, 741
BstDEI CTNAG 8 cut(s) 25, 393, 804, 1163, 1257, 1277, 1322, 1935
BstDSI CCRYGG 2 cut(s) 939, 1824
BstF5I GGATG 8 cut(s) 382, 421, 630, 1347, 1525, 1834, 2203, 2229
BstFNI CGCG 1 cut(s) 76
BstHHI GCGC 2 cut(s) 76, 319
BstKTI GATC 9 cut(s) 13, 115, 150, 436, 1036, 1170, 1276, 1759, 1906
BstMAI GTCTC 8 cut(s) 204, 227, 246, 657, 929, 1041, 1664, 1938
BstMBI GATC 9 cut(s) 10, 112, 147, 433, 1033, 1167, 1273, 1756, 1903
BstMWI GCNNNNNNNGC 9 cut(s) 320, 506, 1706, 1817, 1952, 2143, 2149, 2243, 2368
BstNI CCWGG 1 cut(s) 71
BstNSI RCATGY 1 cut(s) 469
BstPAI GACNNNNGTC 1 cut(s) 914
BstSCI CCNGG 1 cut(s) 69
BstSFI CTRYAG 7 cut(s) 371, 381, 447, 1383, 1647, 2316, 2466
BstUI CGCG 1 cut(s) 76
BstV2I GAAGAC 2 cut(s) 1665, 2034
BstX2I RGATCY 6 cut(s) 10, 112, 1033, 1167, 1273, 1903
BstXI CCANNNNNNTGG 1 cut(s) 1831
BstYI RGATCY 6 cut(s) 10, 112, 1033, 1167, 1273, 1903
BsuRI GGCC 1 cut(s) 1190
BtgI CCRYGG 2 cut(s) 939, 1824
BtgZI GCGATG 3 cut(s) 64, 569, 795
BtrI CACGTC 3 cut(s) 214, 569, 2394
BtsCI GGATG 8 cut(s) 382, 421, 630, 1347, 1525, 1834, 2203, 2229
BtsI GCAGTG 2 cut(s) 1272, 1919
BtsIMutI CAGTG 4 cut(s) 1272, 1330, 1338, 1919
BveI ACCTGC 1 cut(s) 1659
Cac8I GCNNGC 4 cut(s) 321, 463, 467, 741
CaiI CAGNNNCTG 2 cut(s) 1144, 2444
CfoI GCGC 2 cut(s) 76, 319
Cfr13I GGNCC 3 cut(s) 17, 1614, 2263
CseI GACGC 4 cut(s) 65, 209, 1920, 2480
Csp6I GTAC 5 cut(s) 947, 1195, 1524, 2257, 2329
CviAII CATG 6 cut(s) 466, 907, 940, 1825, 2260, 2359
CviQI GTAC 5 cut(s) 947, 1195, 1524, 2257, 2329
DdeI CTNAG 8 cut(s) 25, 393, 804, 1163, 1257, 1277, 1322, 1935
DpnI GATC 9 cut(s) 12, 114, 149, 435, 1035, 1169, 1275, 1758, 1905
DpnII GATC 9 cut(s) 10, 112, 147, 433, 1033, 1167, 1273, 1756, 1903
Eam1104I CTCTTC 2 cut(s) 159, 1341
EarI CTCTTC 2 cut(s) 159, 1341
EciI GGCGGA 1 cut(s) 2358
Ecl136II GAGCTC 2 cut(s) 1578, 2419
Eco130I CCWWGG 3 cut(s) 939, 1056, 1824
Eco24I GRGCYC 3 cut(s) 1309, 1580, 2421
Eco31I GGTCTC 1 cut(s) 929
Eco47I GGWCC 3 cut(s) 17, 1614, 2263
Eco53kI GAGCTC 2 cut(s) 1578, 2419
Eco57I CTGAAG 4 cut(s) 113, 282, 1205, 2181
Eco88I CYCGRG 1 cut(s) 95
EcoICRI GAGCTC 2 cut(s) 1578, 2419
EcoRII CCWGG 1 cut(s) 69
EcoT14I CCWWGG 3 cut(s) 939, 1056, 1824
EcoT22I ATGCAT 1 cut(s) 583
EcoT38I GRGCYC 3 cut(s) 1309, 1580, 2421
ErhI CCWWGG 3 cut(s) 939, 1056, 1824
Esp3I CGTCTC 3 cut(s) 204, 227, 1938
FaeI CATG 6 cut(s) 469, 910, 943, 1828, 2263, 2362
FalI AAGNNNNNCTT 2 cut(s) 1617, 1649
FaqI GGGAC 1 cut(s) 902
FatI CATG 6 cut(s) 465, 906, 939, 1824, 2259, 2358
FauI CCCGC 1 cut(s) 2100
FblI GTMKAC 1 cut(s) 794
FokI GGATG 8 cut(s) 389, 428, 617, 1354, 1532, 1841, 2210, 2236
FriOI GRGCYC 3 cut(s) 1309, 1580, 2421
GlaI GCGC 2 cut(s) 75, 318
GsuI CTGGAG 8 cut(s) 254, 569, 677, 1008, 1065, 1431, 1705, 1815
HaeIII GGCC 1 cut(s) 1190
HapII CCGG 2 cut(s) 634, 1859
HgaI GACGC 4 cut(s) 65, 209, 1920, 2480
HhaI GCGC 2 cut(s) 76, 319
Hin1I GRCGYC 2 cut(s) 1931, 1983
Hin1II CATG 6 cut(s) 469, 910, 943, 1828, 2263, 2362
Hin6I GCGC 2 cut(s) 74, 317
HinP1I GCGC 2 cut(s) 74, 317
HincII GTYRAC 3 cut(s) 58, 390, 795
HindII GTYRAC 3 cut(s) 58, 390, 795
HindIII AAGCTT 3 cut(s) 125, 737, 832
HpaI GTTAAC 2 cut(s) 58, 390
HpaII CCGG 2 cut(s) 634, 1859
HphI GGTGA 4 cut(s) 71, 1191, 1541, 2426
Hpy166II GTNNAC 6 cut(s) 58, 331, 390, 795, 1195, 1784
Hpy8I GTNNAC 6 cut(s) 58, 331, 390, 795, 1195, 1784
Hpy99I CGWCG 5 cut(s) 67, 409, 845, 2051, 2496
HpyAV CCTTC 6 cut(s) 277, 901, 1180, 1858, 2156, 2234
HpyCH4III ACNGT 4 cut(s) 409, 1333, 1648, 1963
HpyCH4IV ACGT 7 cut(s) 213, 568, 1110, 1240, 1983, 2008, 2393
HpyF10VI GCNNNNNNNGC 9 cut(s) 320, 506, 1706, 1817, 1952, 2143, 2149, 2243, 2368
HpyF3I CTNAG 8 cut(s) 25, 393, 804, 1163, 1257, 1277, 1322, 1935
HpySE526I ACGT 7 cut(s) 213, 568, 1110, 1240, 1983, 2008, 2393
Hsp92I GRCGYC 2 cut(s) 1931, 1983
Hsp92II CATG 6 cut(s) 469, 910, 943, 1828, 2263, 2362
HspAI GCGC 2 cut(s) 74, 317
Kpn2I TCCGGA 2 cut(s) 633, 1858
KspAI GTTAAC 2 cut(s) 58, 390
Kzo9I GATC 9 cut(s) 10, 112, 147, 433, 1033, 1167, 1273, 1756, 1903
LguI GCTCTTC 1 cut(s) 159
LmnI GCTCC 5 cut(s) 152, 1628, 1891, 2243, 2300
MaeII ACGT 7 cut(s) 213, 568, 1110, 1240, 1983, 2008, 2393
MaeIII GTNAC 4 cut(s) 77, 1111, 1288, 2104
MalI GATC 9 cut(s) 12, 114, 149, 435, 1035, 1169, 1275, 1758, 1905
MbiI CCGCTC 2 cut(s) 174, 2252
MboI GATC 9 cut(s) 10, 112, 147, 433, 1033, 1167, 1273, 1756, 1903
MfeI CAATTG 1 cut(s) 2267
MflI RGATCY 6 cut(s) 10, 112, 1033, 1167, 1273, 1903
MhlI GDGCHC 6 cut(s) 184, 1309, 1580, 1633, 2305, 2421
MlyI GAGTC 2 cut(s) 904, 1358
MmeI TCCRAC 2 cut(s) 469, 2095
Mph1103I ATGCAT 1 cut(s) 583
MroI TCCGGA 2 cut(s) 633, 1858
MslI CAYNNNNRTG 1 cut(s) 1829
MspI CCGG 2 cut(s) 634, 1859
MspR9I CCNGG 1 cut(s) 71
MunI CAATTG 1 cut(s) 2267
MvaI CCWGG 1 cut(s) 71
MvnI CGCG 1 cut(s) 76
MwoI GCNNNNNNNGC 9 cut(s) 320, 506, 1706, 1817, 1952, 2143, 2149, 2243, 2368
NcoI CCATGG 2 cut(s) 939, 1824
NdeII GATC 9 cut(s) 10, 112, 147, 433, 1033, 1167, 1273, 1756, 1903
NheI GCTAGC 1 cut(s) 461
NlaIII CATG 6 cut(s) 469, 910, 943, 1828, 2263, 2362
NlaIV GGNNCC 1 cut(s) 1120
NmuCI GTSAC 1 cut(s) 77
NsiI ATGCAT 1 cut(s) 583
NspI RCATGY 1 cut(s) 469
PaeI GCATGC 1 cut(s) 469
PaeR7I CTCGAG 1 cut(s) 95
PciSI GCTCTTC 1 cut(s) 159
PcsI WCGNNNNNNNCGW 1 cut(s) 205
PfeI GAWTC 8 cut(s) 89, 264, 645, 1154, 1208, 1911, 2183, 2277
PflFI GACNNNGTC 2 cut(s) 335, 1961
PleI GAGTC 2 cut(s) 904, 1357
PpsI GAGTC 2 cut(s) 904, 1357
PshAI GACNNNNGTC 1 cut(s) 914
PshBI ATTAAT 1 cut(s) 1065
Psp124BI GAGCTC 2 cut(s) 1580, 2421
Psp6I CCWGG 1 cut(s) 69
PspGI CCWGG 1 cut(s) 69
PspN4I GGNNCC 1 cut(s) 1120
PspPI GGNCC 3 cut(s) 17, 1614, 2263
PstI CTGCAG 3 cut(s) 385, 451, 1387
PstNI CAGNNNCTG 2 cut(s) 1144, 2444
PsuI RGATCY 6 cut(s) 10, 112, 1033, 1167, 1273, 1903
PsyI GACNNNGTC 2 cut(s) 335, 1961
RsaI GTAC 5 cut(s) 948, 1196, 1525, 2258, 2330
RsaNI GTAC 5 cut(s) 947, 1195, 1524, 2257, 2329
RseI CAYNNNNRTG 1 cut(s) 1829
SacI GAGCTC 2 cut(s) 1580, 2421
SalI GTCGAC 1 cut(s) 793
SapI GCTCTTC 1 cut(s) 159
Sau3AI GATC 9 cut(s) 10, 112, 147, 433, 1033, 1167, 1273, 1756, 1903
Sau96I GGNCC 3 cut(s) 17, 1614, 2263
ScaI AGTACT 2 cut(s) 948, 2330
SchI GAGTC 2 cut(s) 904, 1358
ScrFI CCNGG 1 cut(s) 71
SduI GDGCHC 6 cut(s) 184, 1309, 1580, 1633, 2305, 2421
SfcI CTRYAG 7 cut(s) 371, 381, 447, 1383, 1647, 2316, 2466
Sfr274I CTCGAG 1 cut(s) 95
SinI GGWCC 3 cut(s) 17, 1614, 2263
SlaI CTCGAG 1 cut(s) 95
SmiMI CAYNNNNRTG 1 cut(s) 1829
SmlI CTYRAG 7 cut(s) 95, 278, 860, 1085, 1308, 2147, 2332
SmoI CTYRAG 7 cut(s) 95, 278, 860, 1085, 1308, 2147, 2332
SphI GCATGC 1 cut(s) 469
SsiI CCGC 7 cut(s) 174, 777, 1151, 2093, 2138, 2250, 2369
SspI AATATT 3 cut(s) 668, 1069, 1135
SstI GAGCTC 2 cut(s) 1580, 2421
StyD4I CCNGG 1 cut(s) 69
StyI CCWWGG 3 cut(s) 939, 1056, 1824
TaaI ACNGT 4 cut(s) 409, 1333, 1648, 1963
TaiI ACGT 7 cut(s) 216, 571, 1113, 1243, 1986, 2011, 2396
TaqI TCGA 7 cut(s) 39, 96, 404, 794, 2049, 2457, 2505
TaqII GACCGA 1 cut(s) 2310
TatI WGTACW 4 cut(s) 946, 1194, 2256, 2328
TauI GCSGC 2 cut(s) 780, 2140
TfiI GAWTC 8 cut(s) 89, 264, 645, 1154, 1208, 1911, 2183, 2277
TscAI CASTG 4 cut(s) 1272, 1330, 1338, 1926
TseFI GTSAC 1 cut(s) 77
Tsp45I GTSAC 1 cut(s) 77
TspDTI ATGAA 5 cut(s) 137, 1725, 1983, 2447, 2466
TspGWI ACGGA 4 cut(s) 179, 215, 668, 2035
TspRI CASTG 4 cut(s) 1272, 1330, 1338, 1926
Tth111I GACNNNGTC 2 cut(s) 335, 1961
VpaK11BI GGWCC 3 cut(s) 17, 1614, 2263
VspI ATTAAT 1 cut(s) 1065
XapI RAATTY 4 cut(s) 503, 1638, 1750, 2077
XceI RCATGY 1 cut(s) 469
XcmI CCANNNNNNNNNTGG 2 cut(s) 946, 1027
XhoI CTCGAG 1 cut(s) 95
XmiI GTMKAC 1 cut(s) 794
ZraI GACGTC 1 cut(s) 1984
ZrmI AGTACT 2 cut(s) 948, 2330
Zsp2I ATGCAT 1 cut(s) 583
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.