FvH4_7g27490

Conserved oligomeric Golgi complex subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0012118
Physical Location & Seq
Reverse (-)
20525448 .. 20529877
4430 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g27490.t1

Sequence Viewer

Length: 2499 bp
ATGATGCTGGATCTCGGTCCGTTCTCCGACGAGAACTTCGACCGGAAGAAGTGGGTGAACTCGGCGTGCCAGAGCCGCCACCCGCAGGACTCAGTCGACAAGCACCTCGCGGATCTGGAGATGAAAATCCAGATGGTCTCGGAGGAGATCGGCGCCTCGCTCGAGGAGCAGAGCGCCTCCTCTCTCCTCCGCGTGCCACGCGCCACGCGCGAAGTCATCCGCCTCCGCGACGACGCCGTTTCGCTCCGCTCCGCCGTGTCATCGATCCTCGACAAGCTCAAGAAGGCCGAGGGATTGTCAGCTGAGTCTATAATGGCGCTTGCGAAGTATGATATAGTGAAGCAGAGAATGGAAGCTGCGTATGAAACGTTACAGGATGCTGCTGGATTGACTCAACTGAGCTCGACTGTGGAGGACGTTTTCGCCAGCGGTGATCTTCCTCGCGCTGCCGAAACGCTGGCCAACATGCGGCATTGCTTGTCAGCTGTTGGTGAGGTTGCGGAGTTTGCTAATGTGAGGAAGCAACTTGAGGTCTTAGAGGACAGGCTTGATTCGATGGTGCAACCGCGTCTTACAGATGCAATATCTAACCGGAAGGTTGAAGTTGCGCAAGATTTGCGGGGAATTCTCATTAGAATCGGGAGATTCAAGTCCATGGAGCTACATTATACAAAAGTTCACCTAAAGCCGATAAAGCAGCTCTGGGAAGATTTTGACTCAAAACAACCACCTTCTAATAAGCTTGCAACTGACAAGACTAGTAATGAGATTCAGTCTGCTACTTCCGGCATTCTGTTTTCCACCTGGCTGCCAAATTTCTATGATGAGTTGCTGCTATATCTTGAACAAGAATGGAAGTGGTGCATGGTTGCCTTTCCCGAGGATTACAAATCCCTTGTCCCAAAGCTGCTCATTGAGACGATGATAGCTGTAGGAGCAAGTTTTGTTTCACGCATCAACCTTGCAACGGGTGATGTTGTGCCAGAAACAAAATCACTGGGAAAAGGTATATTAGACATTCTCTCTGGTGATATGCCAAAGGGTATCAAGATCCAGACAAAGCATCTGGAGGCTCTGATTGAATTACACAATATGACCCAGACCTTTGCAAGGAACATTCAGCACTTGTTTTCAGAATCTGATCTTCGTGTCTTGATGGATACGCTAAAGTCGGTGTATTTACCCTATGAATCATTTAAGCAGAGGTATGGACAGATGGAGCGTGCTATACTTTCTGCTGAGATTGCTGGGGTGGATCTAAGAGGAGCTGTCACTCGTGGCGTGGGAGCTCAGGGAATTGAACTTAGTGAAACGGTTCGCAGAATGGAGGAATCCATTCCACAAGTTATTGTACTTCTTGAGGCAGCCGTTGAGAGATGCATAAGCTTCACTGGAGGTTCCGAAGCGGATGAGCTAATTATTGCAGTTGATGACATTATGTTGCTATATATCTCCACCTTGCAAGAAACTCTGAAATCAGTAAGAGTTGTATGTGGAGTGGATCATGGTGGTGATGGAGTTGGCTCAAGGAAGGAGATGAGTTTGGATAAGAAGGATGGCCAAAGTTCACGGAGAAGTGACTCGATTTCAAATGAGGAGGAGTGGTCCATCGTGCAAGGTGCTTTGCAAATCCTTACAGTGGCAGATTGTCTAACTAGCAGGTCCTCTGTTTTTGAAGCTTCCCTAAGAGCTACTCTGGCTAGGTTGAGCACAGCTCTTTCTGTTTCAGTATTTGGTTCAAGTGCAGACCAAAACCTGTCACATGCTGCTAGTGATGATGGAAATGGGGAACCATCTTTGGGTGGAAGAGCTGCCTTGGATGTGGCAGCTGTTCGGCTTATTGATGTTCCTGAGAAGGCTCGGAAACTCTTCAACCTTTTAAGTCAGTCTAAAGATCCCCGGTTTCATGCACTTCCACTTGCATCTCAAAGAGTTGCAGCATTTGCCGACACCGTTAATGAACTTGTATATGACGTACTCATTTCTAAAGTACGGCAACGCCTCAGTGATGTTTCTCGACTGCCAATATGGTCCTCAGTTGAAGAACAGAGTGTTTACCATCTGCCAACCTTTAGTGCTTCCCCTCAGTCCTATGTGACCAATGTTGGTGAATATCTTCTTACACTACCCCAGCAGCTGGAGCCCCTTGCAGAGGGCATTGCAAATAGTGATGCCAACAATGAGGAAGCCCAGTTTTTTGCTACAGAATGGATGTTCAAGGTTGCAGAGGGTGCCACTGCTCTTTACATGGAGCAGCTACGAGGGATTCAGTATATCACAGACCGTGGAGCTCAACAGTTATCTGTTGACATAGAGTATCTTAGCAATGTGCTTTCTGCTCTGTCAATGCCAATTCCTCCAGTTCTATCCACATTCCATACCTGTCTTTCCACCCCGAGAGATCAGCTGAGAGATCTTATCAAATCAGATTCAGGAAATCAGCTTGATCTTCCTACTGCAAACCTTATTTGTAAGATGCGGCGTGTGATTATAGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
COG7

Protein Analysis

833

Amino Acids

92.1

Weight (kDa)

5.11

Isoelectric Point (pI)

43.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
COG7 PF10191 4 - 828 1.6e-273 Golgi complex component 7 (COG7)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012118)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G51430
fragaria_vesca FvH4_7g19100 FvH4_7g27490
malus_domestica MD01G1182800.v1.1 MD07G1253700.v1.1
prunus_persica Prupe.2G277000_v2.0.a1
pyrus_communis pycom01g19300 pycom07g22640
rosa_chinensis RchiOBHm_Chr1g0374281
rosa_laevigata RLG00000026746
rosa_multiflora Rmu_ssc0000007.1_g000022
rosa_roxburghii Rroxscaffold_4G00283580
rosa_rugosa Rorug01G0382700
rosa_samantha Rh1AG393300 Rh1CG370500 Rh1CG371100 Rh1DG387900 Rh1DG388500
rosa_wichuraiana Rw1G034080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 609
Acc36I ACCTGC 1 cut(s) 1650
AccB1I GGYRCC 2 cut(s) 152, 2231
AccB7I CCANNNNNTGG 1 cut(s) 2137
AccBSI CCGCTC 1 cut(s) 249
AccI GTMKAC 1 cut(s) 96
AccII CGCG 8 cut(s) 110, 192, 201, 208, 210, 228, 444, 568
AclI AACGTT 1 cut(s) 368
AclWI GGATC 7 cut(s) 18, 120, 259, 1045, 1263, 1509, 1889
AcoI YGGCCR 2 cut(s) 459, 1558
AcsI RAATTY 2 cut(s) 624, 814
AcyI GRCGYC 2 cut(s) 153, 234
AfaI GTAC 3 cut(s) 1353, 1977, 1992
AfiI CCNNNNNNNGG 8 cut(s) 85, 468, 967, 1110, 1639, 1799, 2137, 2152
AhlI ACTAGT 1 cut(s) 758
AjnI CCWGG 1 cut(s) 803
Alw21I GWGCWC 4 cut(s) 404, 1291, 1712, 2293
Alw26I GTCTC 2 cut(s) 142, 911
AlwI GGATC 7 cut(s) 18, 120, 259, 1045, 1263, 1509, 1889
AlwNI CAGNNNCTG 2 cut(s) 1139, 2137
Ama87I CYCGRG 3 cut(s) 161, 878, 2395
AoxI GGCC 3 cut(s) 285, 459, 1558
ApoI RAATTY 2 cut(s) 624, 814
ArsI GACNNNNNNTTYG 4 cut(s) 20, 52, 882, 914
Asp700I GAANNNNTTC 4 cut(s) 1314, 1335, 1868, 2115
AspLEI GCGC 7 cut(s) 155, 176, 203, 210, 319, 446, 610
AspS9I GGNCC 4 cut(s) 17, 1605, 1662, 2031
AsuC2I CCSGG 1 cut(s) 1900
AsuHPI GGTGA 8 cut(s) 67, 443, 503, 671, 983, 1040, 1523, 2120
AvaI CYCGRG 3 cut(s) 161, 878, 2395
AvaII GGWCC 4 cut(s) 17, 1605, 1662, 2031
BalI TGGCCA 2 cut(s) 461, 1560
BanI GGYRCC 2 cut(s) 152, 2231
BanII GRGCYC 4 cut(s) 404, 1291, 2145, 2293
BauI CACGAG 1 cut(s) 1275
Bbv12I GWGCWC 4 cut(s) 404, 1291, 1712, 2293
BceAI ACGGC 4 cut(s) 221, 239, 1352, 2009
BciT130I CCWGG 1 cut(s) 805
BciVI GTATCC 1 cut(s) 1153
BcnI CCSGG 1 cut(s) 1900
BcoDI GTCTC 2 cut(s) 142, 911
BcuI ACTAGT 1 cut(s) 758
BfaI CTAG 4 cut(s) 759, 1656, 1701, 1770
BfmI CTRYAG 2 cut(s) 930, 2202
BfoI RGCGCY 3 cut(s) 156, 177, 320
BfuAI ACCTGC 1 cut(s) 1650
BfuI GTATCC 1 cut(s) 1153
BglII AGATCT 1 cut(s) 2413
Bme1390I CCNGG 2 cut(s) 805, 1900
Bme18I GGWCC 4 cut(s) 17, 1605, 1662, 2031
BmeT110I CYCGRG 3 cut(s) 161, 878, 2395
BmgT120I GGNCC 4 cut(s) 17, 1605, 1662, 2031
BmiI GGNNCC 5 cut(s) 154, 1399, 1791, 2142, 2233
BmrFI CCNGG 2 cut(s) 805, 1900
BmrI ACTGGG 2 cut(s) 1007, 2185
BmsI GCATC 8 cut(s) 367, 568, 963, 1072, 1367, 1931, 2161, 2466
BmuI ACTGGG 2 cut(s) 1007, 2185
BplI GAGNNNNNCTC 2 cut(s) 1699, 1731
BpmI CTGGAG 5 cut(s) 137, 1088, 1413, 2159, 2343
Bpu10I CCTNAGC 1 cut(s) 1290
BpuEI CTTGAG 4 cut(s) 263, 548, 1379, 1510
BpuMI CCSGG 1 cut(s) 1900
Bsa29I ATCGAT 1 cut(s) 263
BsaBI GATNNNNATC 1 cut(s) 125
BsaHI GRCGYC 2 cut(s) 153, 234
BsaI GGTCTC 1 cut(s) 142
BsaJI CCNNGG 6 cut(s) 288, 654, 879, 1815, 1898, 2284
BsaWI WCCGGW 2 cut(s) 42, 591
BsaXI ACNNNNNCTCC 2 cut(s) 1589, 1619
Bsc4I CCNNNNNNNGG 8 cut(s) 85, 468, 967, 1110, 1639, 1799, 2137, 2152
Bse1I ACTGG 4 cut(s) 1002, 1396, 2191, 2360
Bse3DI GCAATG 3 cut(s) 472, 2157, 2332
Bse8I GATNNNNATC 1 cut(s) 125
BseBI CCWGG 1 cut(s) 805
BseCI ATCGAT 1 cut(s) 263
BseDI CCNNGG 6 cut(s) 288, 654, 879, 1815, 1898, 2284
BseGI GGATG 6 cut(s) 216, 382, 1414, 1561, 1825, 2217
BseJI GATNNNNATC 1 cut(s) 125
BseLI CCNNNNNNNGG 8 cut(s) 85, 468, 967, 1110, 1639, 1799, 2137, 2152
BseMI GCAATG 3 cut(s) 472, 2157, 2332
BseNI ACTGG 4 cut(s) 1002, 1396, 2191, 2360
BseRI GAGGAG 7 cut(s) 158, 169, 176, 179, 1278, 1610, 1613
BseYI CCCAGC 2 cut(s) 1247, 2130
BsgI GTGCAG 1 cut(s) 1764
Bsh1236I CGCG 8 cut(s) 110, 192, 201, 208, 210, 228, 444, 568
Bsh1285I CGRYCG 1 cut(s) 43
BshFI GGCC 3 cut(s) 287, 461, 1560
BshNI GGYRCC 2 cut(s) 152, 2231
BshVI ATCGAT 1 cut(s) 263
BsiEI CGRYCG 1 cut(s) 43
BsiHKAI GWGCWC 4 cut(s) 404, 1291, 1712, 2293
BsiHKCI CYCGRG 3 cut(s) 161, 878, 2395
BsiSI CCGG 4 cut(s) 43, 592, 786, 1900
BslFI GGGAC 1 cut(s) 884
BslI CCNNNNNNNGG 8 cut(s) 85, 468, 967, 1110, 1639, 1799, 2137, 2152
BsmAI GTCTC 2 cut(s) 142, 911
BsmBI CGTCTC 1 cut(s) 911
BsmFI GGGAC 1 cut(s) 884
BsmI GAATGC 1 cut(s) 789
BsnI GGCC 3 cut(s) 287, 461, 1560
Bso31I GGTCTC 1 cut(s) 142
BsoBI CYCGRG 3 cut(s) 161, 878, 2395
Bsp1286I GDGCHC 5 cut(s) 404, 1291, 1712, 2145, 2293
Bsp19I CCATGG 1 cut(s) 654
BspANI GGCC 3 cut(s) 287, 461, 1560
BspDI ATCGAT 1 cut(s) 263
BspFNI CGCG 8 cut(s) 110, 192, 201, 208, 210, 228, 444, 568
BspLI GGNNCC 5 cut(s) 154, 1399, 1791, 2142, 2233
BspMI ACCTGC 1 cut(s) 1650
BspPI GGATC 7 cut(s) 18, 120, 259, 1045, 1263, 1509, 1889
BspQI GCTCTTC 1 cut(s) 1801
BspT107I GGYRCC 2 cut(s) 152, 2231
BspTNI GGTCTC 1 cut(s) 142
BsrBI CCGCTC 1 cut(s) 249
BsrDI GCAATG 3 cut(s) 472, 2157, 2332
BsrI ACTGG 4 cut(s) 1002, 1396, 2191, 2360
BssECI CCNNGG 6 cut(s) 288, 654, 879, 1815, 1898, 2284
BssNI GRCGYC 2 cut(s) 153, 234
BssSI CACGAG 1 cut(s) 1275
BssT1I CCWWGG 2 cut(s) 654, 1815
Bst2BI CACGAG 1 cut(s) 1275
Bst2UI CCWGG 1 cut(s) 805
Bst4CI ACNGT 6 cut(s) 409, 1315, 1639, 1954, 2285, 2298
Bst6I CTCTTC 2 cut(s) 1801, 1874
BstACI GRCGYC 2 cut(s) 153, 234
BstAPI GCANNNNNTGC 3 cut(s) 616, 1943, 2231
BstC8I GCNNGC 7 cut(s) 67, 194, 321, 427, 459, 744, 1224
BstDSI CCRYGG 2 cut(s) 654, 2284
BstENI CCTNNNNNAGG 2 cut(s) 1108, 2150
BstF5I GGATG 6 cut(s) 216, 382, 1414, 1561, 1825, 2217
BstFNI CGCG 8 cut(s) 110, 192, 201, 208, 210, 228, 444, 568
BstH2I RGCGCY 3 cut(s) 156, 177, 320
BstHHI GCGC 7 cut(s) 155, 176, 203, 210, 319, 446, 610
BstMAI GTCTC 2 cut(s) 142, 911
BstMCI CGRYCG 1 cut(s) 43
BstNI CCWGG 1 cut(s) 805
BstNSI RCATGY 2 cut(s) 469, 1766
BstSCI CCNGG 2 cut(s) 803, 1898
BstSFI CTRYAG 2 cut(s) 930, 2202
BstUI CGCG 8 cut(s) 110, 192, 201, 208, 210, 228, 444, 568
BstX2I RGATCY 6 cut(s) 10, 112, 1050, 1255, 1894, 2413
BstYI RGATCY 6 cut(s) 10, 112, 1050, 1255, 1894, 2413
Bsu15I ATCGAT 1 cut(s) 263
BsuI GTATCC 1 cut(s) 1153
BsuRI GGCC 3 cut(s) 287, 461, 1560
BsuTUI ATCGAT 1 cut(s) 263
BtgI CCRYGG 2 cut(s) 654, 2284
BtsCI GGATG 6 cut(s) 216, 382, 1414, 1561, 1825, 2217
BtsI GCAGTG 1 cut(s) 2235
BtsIMutI CAGTG 5 cut(s) 995, 1389, 1644, 2011, 2235
BveI ACCTGC 1 cut(s) 1650
Cac8I GCNNGC 7 cut(s) 67, 194, 321, 427, 459, 744, 1224
CaiI CAGNNNCTG 2 cut(s) 1139, 2137
CfoI GCGC 7 cut(s) 155, 176, 203, 210, 319, 446, 610
Cfr13I GGNCC 4 cut(s) 17, 1605, 1662, 2031
ClaI ATCGAT 1 cut(s) 263
CpoI CGGWCCG 1 cut(s) 17
CseI GACGC 2 cut(s) 242, 557
Csp6I GTAC 3 cut(s) 1352, 1976, 1991
CspI CGGWCCG 1 cut(s) 17
CviAII CATG 7 cut(s) 466, 655, 865, 1505, 1763, 1907, 2248
CviQI GTAC 3 cut(s) 1352, 1976, 1991
DinI GGCGCC 1 cut(s) 154
EaeI YGGCCR 2 cut(s) 459, 1558
Eam1104I CTCTTC 2 cut(s) 1801, 1874
EarI CTCTTC 2 cut(s) 1801, 1874
EciI GGCGGA 2 cut(s) 209, 241
Ecl136II GAGCTC 3 cut(s) 402, 1289, 2291
Eco130I CCWWGG 2 cut(s) 654, 1815
Eco24I GRGCYC 4 cut(s) 404, 1291, 2145, 2293
Eco31I GGTCTC 1 cut(s) 142
Eco47I GGWCC 4 cut(s) 17, 1605, 1662, 2031
Eco53kI GAGCTC 3 cut(s) 402, 1289, 2291
Eco88I CYCGRG 3 cut(s) 161, 878, 2395
EcoICRI GAGCTC 3 cut(s) 402, 1289, 2291
EcoNI CCTNNNNNAGG 2 cut(s) 1108, 2150
EcoO109I RGGNCCY 1 cut(s) 1662
EcoRI GAATTC 1 cut(s) 624
EcoRII CCWGG 1 cut(s) 803
EcoT14I CCWWGG 2 cut(s) 654, 1815
EcoT22I ATGCAT 1 cut(s) 1382
EcoT38I GRGCYC 4 cut(s) 404, 1291, 2145, 2293
EgeI GGCGCC 1 cut(s) 154
EheI GGCGCC 1 cut(s) 154
ErhI CCWWGG 2 cut(s) 654, 1815
Esp3I CGTCTC 1 cut(s) 911
FaeI CATG 7 cut(s) 469, 658, 868, 1508, 1766, 1910, 2251
FaqI GGGAC 1 cut(s) 884
FatI CATG 7 cut(s) 465, 654, 864, 1504, 1762, 1906, 2247
FauI CCCGC 2 cut(s) 90, 612
FblI GTMKAC 1 cut(s) 96
FokI GGATG 6 cut(s) 203, 389, 1421, 1568, 1832, 2224
FriOI GRGCYC 4 cut(s) 404, 1291, 2145, 2293
FspBI CTAG 4 cut(s) 759, 1656, 1701, 1770
FspI TGCGCA 1 cut(s) 609
GlaI GCGC 7 cut(s) 154, 175, 202, 209, 318, 445, 609
GsaI CCCAGC 2 cut(s) 1251, 2134
GsuI CTGGAG 5 cut(s) 137, 1088, 1413, 2159, 2343
HaeII RGCGCY 3 cut(s) 156, 177, 320
HaeIII GGCC 3 cut(s) 287, 461, 1560
HapII CCGG 4 cut(s) 43, 592, 786, 1900
HgaI GACGC 2 cut(s) 242, 557
HhaI GCGC 7 cut(s) 155, 176, 203, 210, 319, 446, 610
Hin1I GRCGYC 2 cut(s) 153, 234
Hin1II CATG 7 cut(s) 469, 658, 868, 1508, 1766, 1910, 2251
Hin6I GCGC 7 cut(s) 153, 174, 201, 208, 317, 444, 608
HinP1I GCGC 7 cut(s) 153, 174, 201, 208, 317, 444, 608
HincII GTYRAC 2 cut(s) 97, 2308
HindII GTYRAC 2 cut(s) 97, 2308
HindIII AAGCTT 3 cut(s) 740, 1384, 1677
HpaII CCGG 4 cut(s) 43, 592, 786, 1900
HphI GGTGA 8 cut(s) 67, 443, 503, 671, 983, 1040, 1523, 2120
Hpy166II GTNNAC 6 cut(s) 58, 97, 679, 1568, 2056, 2308
Hpy188I TCNGA 9 cut(s) 28, 142, 1077, 1135, 1141, 1402, 1473, 1863, 2428
Hpy8I GTNNAC 6 cut(s) 58, 97, 679, 1568, 2056, 2308
Hpy99I CGWCG 3 cut(s) 32, 233, 236
HpyAV CCTTC 6 cut(s) 277, 589, 741, 1525, 1546, 1849
HpyCH4III ACNGT 6 cut(s) 409, 1315, 1639, 1954, 2285, 2298
HpyCH4IV ACGT 3 cut(s) 368, 417, 1974
HpySE526I ACGT 3 cut(s) 368, 417, 1974
Hsp92I GRCGYC 2 cut(s) 153, 234
Hsp92II CATG 7 cut(s) 469, 658, 868, 1508, 1766, 1910, 2251
HspAI GCGC 7 cut(s) 153, 174, 201, 208, 317, 444, 608
KasI GGCGCC 1 cut(s) 152
LguI GCTCTTC 1 cut(s) 1801
LweI GCATC 8 cut(s) 367, 568, 963, 1072, 1367, 1931, 2161, 2466
MaeI CTAG 4 cut(s) 759, 1656, 1701, 1770
MaeII ACGT 3 cut(s) 368, 417, 1974
MaeIII GTNAC 5 cut(s) 369, 1270, 1577, 1758, 2095
MbiI CCGCTC 1 cut(s) 249
MboII GAAGA 9 cut(s) 58, 428, 719, 1136, 1818, 1861, 2054, 2108, 2441
MflI RGATCY 6 cut(s) 10, 112, 1050, 1255, 1894, 2413
MhlI GDGCHC 5 cut(s) 404, 1291, 1712, 2145, 2293
MlsI TGGCCA 2 cut(s) 461, 1560
MluCI AATT 6 cut(s) 624, 814, 1082, 1296, 1416, 2352
MluNI TGGCCA 2 cut(s) 461, 1560
Mly113I GGCGCC 1 cut(s) 153
MlyI GAGTC 5 cut(s) 83, 314, 385, 710, 1574
MmeI TCCRAC 1 cut(s) 51
Mox20I TGGCCA 2 cut(s) 461, 1560
Mph1103I ATGCAT 1 cut(s) 1382
MroXI GAANNNNTTC 4 cut(s) 1314, 1335, 1868, 2115
MscI TGGCCA 2 cut(s) 461, 1560
MseI TTAA 3 cut(s) 1197, 1880, 1956
MslI CAYNNNNRTG 1 cut(s) 1509
Msp20I TGGCCA 2 cut(s) 461, 1560
MspA1I CMGCKG 6 cut(s) 302, 429, 485, 1829, 2137, 2407
MspI CCGG 4 cut(s) 43, 592, 786, 1900
MspR9I CCNGG 2 cut(s) 805, 1900
Mva1269I GAATGC 1 cut(s) 789
MvaI CCWGG 1 cut(s) 805
MvnI CGCG 8 cut(s) 110, 192, 201, 208, 210, 228, 444, 568
NarI GGCGCC 1 cut(s) 153
NciI CCSGG 1 cut(s) 1900
NcoI CCATGG 1 cut(s) 654
NlaIII CATG 7 cut(s) 469, 658, 868, 1508, 1766, 1910, 2251
NlaIV GGNNCC 5 cut(s) 154, 1399, 1791, 2142, 2233
NmeAIII GCCGAG 2 cut(s) 41, 313
NmuCI GTSAC 4 cut(s) 1270, 1577, 1758, 2095
NsbI TGCGCA 1 cut(s) 609
NsiI ATGCAT 1 cut(s) 1382
NspI RCATGY 2 cut(s) 469, 1766
PaeR7I CTCGAG 1 cut(s) 161
PciSI GCTCTTC 1 cut(s) 1801
PcsI WCGNNNNNNNCGW 1 cut(s) 36
PctI GAATGC 1 cut(s) 789
PdmI GAANNNNTTC 4 cut(s) 1314, 1335, 1868, 2115
PfeI GAWTC 9 cut(s) 551, 636, 645, 769, 1136, 1190, 1331, 2266, 2429
PflFI GACNNNGTC 1 cut(s) 92
PflMI CCANNNNNTGG 1 cut(s) 2137
PleI GAGTC 5 cut(s) 83, 313, 385, 710, 1574
PluTI GGCGCC 1 cut(s) 156
PpsI GAGTC 5 cut(s) 83, 313, 385, 710, 1574
PpuMI RGGWCCY 1 cut(s) 1662
Psp124BI GAGCTC 3 cut(s) 404, 1291, 2293
Psp1406I AACGTT 1 cut(s) 368
Psp5II RGGWCCY 1 cut(s) 1662
Psp6I CCWGG 1 cut(s) 803
PspFI CCCAGC 2 cut(s) 1247, 2130
PspGI CCWGG 1 cut(s) 803
PspN4I GGNNCC 5 cut(s) 154, 1399, 1791, 2142, 2233
PspPI GGNCC 4 cut(s) 17, 1605, 1662, 2031
PspPPI RGGWCCY 1 cut(s) 1662
PspXI VCTCGAGB 1 cut(s) 161
PstNI CAGNNNCTG 2 cut(s) 1139, 2137
PsuI RGATCY 6 cut(s) 10, 112, 1050, 1255, 1894, 2413
PsyI GACNNNGTC 1 cut(s) 92
PvuII CAGCTG 5 cut(s) 302, 485, 1829, 2137, 2407
RsaI GTAC 3 cut(s) 1353, 1977, 1992
RsaNI GTAC 3 cut(s) 1352, 1976, 1991
RseI CAYNNNNRTG 1 cut(s) 1509
Rsr2I CGGWCCG 1 cut(s) 17
RsrII CGGWCCG 1 cut(s) 17
SacI GAGCTC 3 cut(s) 404, 1291, 2293
SalI GTCGAC 1 cut(s) 95
SapI GCTCTTC 1 cut(s) 1801
SaqAI TTAA 3 cut(s) 1197, 1880, 1956
Sau96I GGNCC 4 cut(s) 17, 1605, 1662, 2031
SchI GAGTC 5 cut(s) 83, 314, 385, 710, 1574
ScrFI CCNGG 2 cut(s) 805, 1900
SduI GDGCHC 5 cut(s) 404, 1291, 1712, 2145, 2293
SfaNI GCATC 8 cut(s) 367, 568, 963, 1072, 1367, 1931, 2161, 2466
SfcI CTRYAG 2 cut(s) 930, 2202
SfoI GGCGCC 1 cut(s) 154
Sfr274I CTCGAG 1 cut(s) 161
SinI GGWCC 4 cut(s) 17, 1605, 1662, 2031
SlaI CTCGAG 1 cut(s) 161
SmiMI CAYNNNNRTG 1 cut(s) 1509
SmlI CTYRAG 5 cut(s) 161, 278, 527, 1358, 1525
SmoI CTYRAG 5 cut(s) 161, 278, 527, 1358, 1525
SpeI ACTAGT 1 cut(s) 758
Sse9I AATT 6 cut(s) 624, 814, 1082, 1296, 1416, 2352
SspDI GGCGCC 1 cut(s) 152
SspMI CTAG 4 cut(s) 759, 1656, 1701, 1770
SstI GAGCTC 3 cut(s) 404, 1291, 2293
StyD4I CCNGG 2 cut(s) 803, 1898
StyI CCWWGG 2 cut(s) 654, 1815
TaaI ACNGT 6 cut(s) 409, 1315, 1639, 1954, 2285, 2298
TaiI ACGT 3 cut(s) 371, 420, 1977
TaqI TCGA 9 cut(s) 39, 96, 162, 263, 270, 404, 554, 1583, 2017
TaqII GACCGA 1 cut(s) 5
TasI AATT 6 cut(s) 624, 814, 1082, 1296, 1416, 2352
TatI WGTACW 1 cut(s) 1351
TauI GCSGC 3 cut(s) 78, 472, 2482
TfiI GAWTC 9 cut(s) 551, 636, 645, 769, 1136, 1190, 1331, 2266, 2429
Tru1I TTAA 3 cut(s) 1197, 1880, 1956
Tru9I TTAA 3 cut(s) 1197, 1880, 1956
TscAI CASTG 5 cut(s) 1002, 1396, 1644, 2011, 2242
TseFI GTSAC 4 cut(s) 1270, 1577, 1758, 2095
Tsp45I GTSAC 4 cut(s) 1270, 1577, 1758, 2095
TspDTI ATGAA 5 cut(s) 137, 378, 1203, 1895, 1974
TspGWI ACGGA 2 cut(s) 9, 1585
TspRI CASTG 5 cut(s) 1002, 1396, 1644, 2011, 2242
Tth111I GACNNNGTC 1 cut(s) 92
Van91I CCANNNNNTGG 1 cut(s) 2137
VpaK11BI GGWCC 4 cut(s) 17, 1605, 1662, 2031
XagI CCTNNNNNAGG 2 cut(s) 1108, 2150
XapI RAATTY 2 cut(s) 624, 814
XceI RCATGY 2 cut(s) 469, 1766
XhoI CTCGAG 1 cut(s) 161
XmiI GTMKAC 1 cut(s) 96
XmnI GAANNNNTTC 4 cut(s) 1314, 1335, 1868, 2115
XspI CTAG 4 cut(s) 759, 1656, 1701, 1770
Zsp2I ATGCAT 1 cut(s) 1382
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.