Prupe.2G277000_v2.0.a1

Conserved oligomeric Golgi complex subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0012118
Physical Location & Seq
Reverse (-)
27811925 .. 27816540
4616 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G277000.1

Sequence Viewer

Length: 2520 bp
ATGATGCTGGATCTGGGTCCGTTCTCGGACCCGAACTTCAACCCGAAGAAGTGGGTGAACTCGGCGTGTCAAAGTCGGCACCCACAGGACTCAGTCGACAAGCACCTGGTGGATCTCGAGATGAAGCTCCAGATGGTGTCGGAGGAGATCGCAGCTTCGCTCGAGGAGCAGAGCGCCTCCTCCCTCCTCCGCGTCCCACGTGCCACACGTGACGTCGTTCGCCTCCGGGACGACGCCGTCACACTCCGCTCGGCCGTCTCCTCCATCCTCGACAAGCTTAAGAAGGCAGAGGGATCCTCAGCTGAGTCTATAGCGGCGCTTGCGAAAGTTGATATAGTGAAGCAGAGGATGGAAGCTGCATATAAGACATTGCAGGATGCTGCTGGGTTAACCCAACTGAGTGCAACCGTGGAGGACGTGTTTGCAAGTGGTGATCTTCCTCTCGCTGCTGAACATTTAGCCAGCATGAGGCATTGTTTATCTGCTGTTGGGGAGGTTGCTGAATTTGCTAACATAAGGAAGCAACTTGAGGTCTTAGAGGATAAGCTTGATTCAATGGTGCAACCACGTCTAACAGATGCAATATTCAATCGCAAGGTTGACATTGCTCAAGATTTGCGGGGAATTCTCATTCGAATTGGGAGATTCAAGTCCATGGAATTACATTATACAAAAGTTCACCTAAAGCCCATAAAGCAGCTCTGGGAAGATTTTGACGCAAAACAACCACTGCCTAATAAGCTTGCTACTGAGAAATCTCAAGTTGAAAGGCTATCCACTACCAGTGAATCTCAATCAACTGCTCCCGCAATTCTATTCTCCAGCTGGCTTCCAAATTTCTATGATGAGCTGCTACTTTATCTTGAACAAGAATGGAAGTGGTGTATGGTTGCCTTTCCTGAGGATTACAAATTTCTTGTTCCAAAGCTGCTAGTTGAGACAATGGCAGCTGTTGGGGCCAGTTTTGTTTCTCGTATCAACCTTGCGACCGGAGATGTTATTCCTGAAACAAAATCATTAGCAAAAGGTATATTAGATATTCTCTCTGGTGATATGCCAAAGGGTATCAAGATCCAGACAAAGCATCTGGAGGCTTTGATTGAATTACACAACATGACCCAGACCTTTGCAAGGAATATTCAGCACTTGTTTTCAGAATCTGATCTTCGTGTTTTAATGGATACGCTAAAGGCAGTGTATCTTCCATATGAATCATTTAAACAGAGGTATGGGCAGATGGAGCGAGCTATACTTTCTGCTGAGATTGCTGGGGTGGATCTAAGGGGCGCTGTTACTCGTGGTGTGGGAGCGCAGGGAATTGAACTTAGTGAAACAGTTCGCAGAATGGAGGAATCCATTCCCCAAGTAATTGTACTTCTTGAAGCAGCCGTTGAGAGATGCATCAGCTTGACTGGAGGTTCTGAGGCAGATGAACTAATTCTTGCAATTGATGATATAATGTTACAGTATATTTCTACCTTGCTAGAAACCCTGAAATCATTAAGAGTTGTCTGTGGAGTGGATCATGGTAGTGATGGTCTTGGTTCAAAGAAGGAGGTGGGATTGGATAAGAAGGATGGCCAAAGTGCACGTAGAGTTGATTCGATTTCAAATGAGGAGGAGTGGTCCATTGTGCAAGGTGCTCTGCAAATCCTCACAGTTGCAGATTGTCTAACTAGCAGATCCTCTGTATTTGAAGCTTCGCTGAGAGCTACTCTTGCTAGATTAAGCACAACTCTCTCTGTTTCAGTTTTTGGTTCAAGTGTGGACCAAAACCTGTCACATGTTCCTAGTGATGACGGAAATGGGGAACCATCTTTGGGTGGAAGGGCTGCCTTGGATGTGGCAGCTGTGCGGCTCATTGATGTTCCTGAGAAGGCTCGAAAACTCTTTAACCTTTTAAATCAGTCTAAAGATCCCCGGTTTCATGCACTTCCACTTGCGTCTCAGAGAGTTGCCGCATTTGCTGACACAGTTAATGAACTTGTATATGATGTTCTCATCTCTAAAGTACGACAACGCCTCAGTGATGTTTCTCGGTTGCCAATATGGTCCTCAGTTGAAGAACAAAGTGCTTACCATCTCCCAACCTTCAGTGCTTACCCTCAGGCCTATGTAACTAGCATTGGTGAATATCTTCTTACTTTACCACAGCAGTTGGAGCCTCTTGCGGAGGGTATCTCCAACAGTGATGCTAACAATGATGAAGCCCAGTTTTTTGCAACAGAATGGATGTTCAAGGTCGCAGAAGGTGCCACTGCTCTTTACATGGAGCAACTGCGAGGGATTCAGTACATCACGGATCGAGGATCGCAACAGTTATCTGTTGACATTGAGTATCTAAGTAATGTTCTTTCTGCCTTGTCAATGCCAATTCCTCCGGTCCTTGCTACATTTCACACCTGCCTTTCAACCCCAAGAGACCAGCTCAAAGATCTTCTCAAGTCAGATTCAGGAAATCAGCTTGATCTTCCAACTGCAAACCTTGTATGTAAGATGCGGCGTTTGAATCTAGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
COG7

Protein Analysis

840

Amino Acids

92.78

Weight (kDa)

5.19

Isoelectric Point (pI)

41.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012118)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G51430
fragaria_vesca FvH4_7g19100 FvH4_7g27490
malus_domestica MD01G1182800.v1.1 MD07G1253700.v1.1
prunus_persica Prupe.2G277000_v2.0.a1
pyrus_communis pycom01g19300 pycom07g22640
rosa_chinensis RchiOBHm_Chr1g0374281
rosa_laevigata RLG00000026746
rosa_multiflora Rmu_ssc0000007.1_g000022
rosa_roxburghii Rroxscaffold_4G00283580
rosa_rugosa Rorug01G0382700
rosa_samantha Rh1AG393300 Rh1CG370500 Rh1CG371100 Rh1DG387900 Rh1DG388500
rosa_wichuraiana Rw1G034080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2411
AasI GACNNNNNNGTC 1 cut(s) 236
AatII GACGTC 1 cut(s) 216
Acc36I ACCTGC 1 cut(s) 2411
AccB1I GGYRCC 2 cut(s) 78, 2252
AccBSI CCGCTC 1 cut(s) 249
AccI GTMKAC 1 cut(s) 96
AccII CGCG 1 cut(s) 192
AciI CCGC 9 cut(s) 190, 247, 314, 619, 807, 1855, 1959, 2171, 2500
AcoI YGGCCR 2 cut(s) 252, 1579
AcsI RAATTY 4 cut(s) 503, 624, 835, 911
AcuI CTGAAG 1 cut(s) 2077
AcvI CACGTG 2 cut(s) 200, 209
AcyI GRCGYC 2 cut(s) 213, 234
AdeI CACNNNGTG 1 cut(s) 109
AfaI GTAC 3 cut(s) 1374, 2013, 2294
AfiI CCNNNNNNNGG 3 cut(s) 468, 1131, 1820
AflII CTTAAG 1 cut(s) 278
AflIII ACRYGT 3 cut(s) 206, 417, 1783
AjiI CACGTC 2 cut(s) 418, 569
AjnI CCWGG 1 cut(s) 105
Alw21I GWGCWC 2 cut(s) 1591, 1645
Alw26I GTCTC 4 cut(s) 262, 932, 1950, 2415
Alw44I GTGCAC 1 cut(s) 1587
AlwNI CAGNNNCTG 1 cut(s) 1160
Ama87I CYCGRG 2 cut(s) 116, 161
AoxI GGCC 4 cut(s) 252, 957, 1579, 2109
ApaLI GTGCAC 1 cut(s) 1587
ApoI RAATTY 4 cut(s) 503, 624, 835, 911
Asp700I GAANNNNTTC 4 cut(s) 1335, 1356, 1437, 2136
AspLEI GCGC 4 cut(s) 176, 319, 1289, 1312
AspS9I GGNCC 7 cut(s) 17, 28, 957, 1626, 1768, 2052, 2383
AsuC2I CCSGG 2 cut(s) 227, 1921
AsuHPI GGTGA 5 cut(s) 67, 443, 671, 1061, 2141
AsuII TTCGAA 1 cut(s) 634
AvaI CYCGRG 2 cut(s) 116, 161
AvaII GGWCC 6 cut(s) 17, 28, 1626, 1768, 2052, 2383
AxyI CCTNAGG 2 cut(s) 900, 2106
BaeGI GKGCMC 1 cut(s) 1591
BalI TGGCCA 1 cut(s) 1581
BamHI GGATCC 1 cut(s) 293
BanI GGYRCC 2 cut(s) 78, 2252
BarI GAAGNNNNNNTAC 2 cut(s) 1359, 1391
BauI CACGAG 1 cut(s) 1296
BbrPI CACGTG 2 cut(s) 200, 209
Bbv12I GWGCWC 2 cut(s) 1591, 1645
BbvCI CCTCAGC 1 cut(s) 298
BccI CCATC 8 cut(s) 127, 272, 343, 1231, 1529, 1571, 1822, 2088
BceAI ACGGC 3 cut(s) 221, 239, 1373
BciT130I CCWGG 1 cut(s) 107
BciVI GTATCC 1 cut(s) 1174
BcnI CCSGG 2 cut(s) 227, 1921
BcoDI GTCTC 4 cut(s) 262, 932, 1950, 2415
BfaI CTAG 7 cut(s) 932, 1484, 1677, 1722, 1791, 2121, 2513
BfmI CTRYAG 1 cut(s) 309
BfoI RGCGCY 3 cut(s) 177, 320, 1290
BfrI CTTAAG 1 cut(s) 278
BfuAI ACCTGC 1 cut(s) 2411
BfuI GTATCC 1 cut(s) 1174
BglII AGATCT 1 cut(s) 2434
Bme1390I CCNGG 3 cut(s) 107, 227, 1921
Bme18I GGWCC 6 cut(s) 17, 28, 1626, 1768, 2052, 2383
BmeT110I CYCGRG 2 cut(s) 116, 161
BmgBI CACGTC 2 cut(s) 418, 569
BmgT120I GGNCC 7 cut(s) 17, 28, 957, 1626, 1768, 2052, 2383
BmiI GGNNCC 8 cut(s) 18, 30, 80, 295, 958, 1812, 2163, 2254
BmrFI CCNGG 3 cut(s) 107, 227, 1921
BmrI ACTGGG 1 cut(s) 2206
BmsI GCATC 7 cut(s) 367, 568, 1093, 1388, 1410, 2182, 2487
BmuI ACTGGG 1 cut(s) 2206
BplI GAGNNNNNCTC 8 cut(s) 281, 313, 1699, 1731, 2165, 2197, 2412, 2444
BpmI CTGGAG 4 cut(s) 113, 805, 1109, 1434
Bpu10I CCTNAGC 1 cut(s) 298
Bpu14I TTCGAA 1 cut(s) 634
BpuEI CTTGAG 4 cut(s) 548, 594, 744, 2426
BpuMI CCSGG 2 cut(s) 227, 1921
BsaAI YACGTR 3 cut(s) 200, 209, 1592
BsaHI GRCGYC 2 cut(s) 213, 234
BsaI GGTCTC 1 cut(s) 2415
BsaJI CCNNGG 4 cut(s) 408, 654, 1836, 1919
BsaWI WCCGGW 2 cut(s) 989, 2380
BsaXI ACNNNNNCTCC 4 cut(s) 404, 434, 1610, 1640
Bsc4I CCNNNNNNNGG 3 cut(s) 468, 1131, 1820
Bse1I ACTGG 4 cut(s) 783, 960, 1417, 2212
Bse21I CCTNAGG 2 cut(s) 900, 2106
Bse3DI GCAATG 2 cut(s) 368, 603
BseBI CCWGG 1 cut(s) 107
BseDI CCNNGG 4 cut(s) 408, 654, 1836, 1919
BseGI GGATG 6 cut(s) 264, 354, 382, 1582, 1846, 2238
BseLI CCNNNNNNNGG 3 cut(s) 468, 1131, 1820
BseMI GCAATG 2 cut(s) 368, 603
BseNI ACTGG 4 cut(s) 783, 960, 1417, 2212
BseRI GAGGAG 7 cut(s) 158, 169, 176, 179, 250, 1631, 1634
BseSI GKGCMC 1 cut(s) 1591
BseX3I CGGCCG 1 cut(s) 252
BseYI CCCAGC 2 cut(s) 383, 1268
Bsh1236I CGCG 1 cut(s) 192
Bsh1285I CGRYCG 2 cut(s) 255, 990
BshFI GGCC 4 cut(s) 254, 959, 1581, 2111
BshNI GGYRCC 2 cut(s) 78, 2252
BsiEI CGRYCG 2 cut(s) 255, 990
BsiHKAI GWGCWC 2 cut(s) 1591, 1645
BsiHKCI CYCGRG 2 cut(s) 116, 161
BsiSI CCGG 4 cut(s) 226, 990, 1921, 2381
BslFI GGGAC 2 cut(s) 179, 242
BslI CCNNNNNNNGG 3 cut(s) 468, 1131, 1820
BsmAI GTCTC 4 cut(s) 262, 932, 1950, 2415
BsmBI CGTCTC 2 cut(s) 262, 1950
BsmFI GGGAC 2 cut(s) 179, 242
BsnI GGCC 4 cut(s) 254, 959, 1581, 2111
Bso31I GGTCTC 1 cut(s) 2415
BsoBI CYCGRG 2 cut(s) 116, 161
Bsp119I TTCGAA 1 cut(s) 634
Bsp1286I GDGCHC 2 cut(s) 1591, 1645
Bsp19I CCATGG 1 cut(s) 654
BspACI CCGC 9 cut(s) 190, 247, 314, 619, 807, 1855, 1959, 2171, 2500
BspANI GGCC 4 cut(s) 254, 959, 1581, 2111
BspFNI CGCG 1 cut(s) 192
BspLI GGNNCC 8 cut(s) 18, 30, 80, 295, 958, 1812, 2163, 2254
BspMI ACCTGC 1 cut(s) 2411
BspT104I TTCGAA 1 cut(s) 634
BspT107I GGYRCC 2 cut(s) 78, 2252
BspTI CTTAAG 1 cut(s) 278
BspTNI GGTCTC 1 cut(s) 2415
BsrBI CCGCTC 1 cut(s) 249
BsrDI GCAATG 2 cut(s) 368, 603
BsrI ACTGG 4 cut(s) 783, 960, 1417, 2212
BssECI CCNNGG 4 cut(s) 408, 654, 1836, 1919
BssNI GRCGYC 2 cut(s) 213, 234
BssSI CACGAG 1 cut(s) 1296
BssT1I CCWWGG 2 cut(s) 654, 1836
Bst2BI CACGAG 1 cut(s) 1296
Bst2UI CCWGG 1 cut(s) 107
Bst4CI ACNGT 7 cut(s) 409, 1336, 1467, 1660, 1975, 2189, 2319
BstACI GRCGYC 2 cut(s) 213, 234
BstAFI CTTAAG 1 cut(s) 278
BstAPI GCANNNNNTGC 1 cut(s) 2252
BstBAI YACGTR 3 cut(s) 200, 209, 1592
BstBI TTCGAA 1 cut(s) 634
BstC8I GCNNGC 5 cut(s) 321, 463, 744, 827, 1245
BstDSI CCRYGG 2 cut(s) 408, 654
BstENI CCTNNNNNAGG 1 cut(s) 1129
BstF5I GGATG 6 cut(s) 264, 354, 382, 1582, 1846, 2238
BstFNI CGCG 1 cut(s) 192
BstH2I RGCGCY 3 cut(s) 177, 320, 1290
BstHHI GCGC 4 cut(s) 176, 319, 1289, 1312
BstMAI GTCTC 4 cut(s) 262, 932, 1950, 2415
BstMCI CGRYCG 2 cut(s) 255, 990
BstNI CCWGG 1 cut(s) 107
BstNSI RCATGY 1 cut(s) 1787
BstSCI CCNGG 3 cut(s) 105, 225, 1919
BstSFI CTRYAG 1 cut(s) 309
BstSLI GKGCMC 1 cut(s) 1591
BstUI CGCG 1 cut(s) 192
BstX2I RGATCY 8 cut(s) 10, 112, 293, 1071, 1276, 1682, 1915, 2434
BstYI RGATCY 8 cut(s) 10, 112, 293, 1071, 1276, 1682, 1915, 2434
BstZI CGGCCG 1 cut(s) 252
Bsu36I CCTNAGG 2 cut(s) 900, 2106
BsuI GTATCC 1 cut(s) 1174
BsuRI GGCC 4 cut(s) 254, 959, 1581, 2111
BtgI CCRYGG 2 cut(s) 408, 654
BtrI CACGTC 2 cut(s) 418, 569
BtsCI GGATG 6 cut(s) 264, 354, 382, 1582, 1846, 2238
BtsI GCAGTG 3 cut(s) 728, 1200, 2256
BtsIMutI CAGTG 7 cut(s) 728, 790, 1200, 2032, 2101, 2194, 2256
BveI ACCTGC 1 cut(s) 2411
Cac8I GCNNGC 5 cut(s) 321, 463, 744, 827, 1245
CaiI CAGNNNCTG 1 cut(s) 1160
CfoI GCGC 4 cut(s) 176, 319, 1289, 1312
Cfr13I GGNCC 7 cut(s) 17, 28, 957, 1626, 1768, 2052, 2383
CseI GACGC 4 cut(s) 181, 242, 725, 1932
CsiI ACCWGGT 1 cut(s) 105
Csp6I GTAC 3 cut(s) 1373, 2012, 2293
CspCI CAANNNNNGTGG 2 cut(s) 2139, 2174
CviAII CATG 7 cut(s) 466, 655, 1114, 1526, 1784, 1928, 2269
CviQI GTAC 3 cut(s) 1373, 2012, 2293
DraI TTTAAA 2 cut(s) 1219, 1902
DraIII CACNNNGTG 1 cut(s) 109
DrdI GACNNNNNNGTC 1 cut(s) 236
DseDI GACNNNNNNGTC 1 cut(s) 236
EaeI YGGCCR 2 cut(s) 252, 1579
EagI CGGCCG 1 cut(s) 252
EclXI CGGCCG 1 cut(s) 252
Eco130I CCWWGG 2 cut(s) 654, 1836
Eco147I AGGCCT 1 cut(s) 2111
Eco31I GGTCTC 1 cut(s) 2415
Eco47I GGWCC 6 cut(s) 17, 28, 1626, 1768, 2052, 2383
Eco52I CGGCCG 1 cut(s) 252
Eco57I CTGAAG 1 cut(s) 2077
Eco72I CACGTG 2 cut(s) 200, 209
Eco81I CCTNAGG 2 cut(s) 900, 2106
Eco88I CYCGRG 2 cut(s) 116, 161
EcoNI CCTNNNNNAGG 1 cut(s) 1129
EcoRI GAATTC 1 cut(s) 624
EcoRII CCWGG 1 cut(s) 105
EcoT14I CCWWGG 2 cut(s) 654, 1836
EcoT22I ATGCAT 1 cut(s) 1403
ErhI CCWWGG 2 cut(s) 654, 1836
Esp3I CGTCTC 2 cut(s) 262, 1950
FaeI CATG 7 cut(s) 469, 658, 1117, 1529, 1787, 1931, 2272
FaqI GGGAC 2 cut(s) 179, 242
FatI CATG 7 cut(s) 465, 654, 1113, 1525, 1783, 1927, 2268
FauI CCCGC 2 cut(s) 612, 814
FauNDI CATATG 1 cut(s) 1207
FblI GTMKAC 1 cut(s) 96
FokI GGATG 6 cut(s) 251, 361, 389, 1589, 1853, 2245
FspBI CTAG 7 cut(s) 932, 1484, 1677, 1722, 1791, 2121, 2513
GlaI GCGC 4 cut(s) 175, 318, 1288, 1311
GsaI CCCAGC 2 cut(s) 387, 1272
GsuI CTGGAG 4 cut(s) 113, 805, 1109, 1434
HaeII RGCGCY 3 cut(s) 177, 320, 1290
HaeIII GGCC 4 cut(s) 254, 959, 1581, 2111
HapII CCGG 4 cut(s) 226, 990, 1921, 2381
HgaI GACGC 4 cut(s) 181, 242, 725, 1932
HhaI GCGC 4 cut(s) 176, 319, 1289, 1312
Hin1I GRCGYC 2 cut(s) 213, 234
Hin1II CATG 7 cut(s) 469, 658, 1117, 1529, 1787, 1931, 2272
Hin6I GCGC 4 cut(s) 174, 317, 1287, 1310
HinP1I GCGC 4 cut(s) 174, 317, 1287, 1310
HincII GTYRAC 4 cut(s) 97, 390, 601, 2329
HindII GTYRAC 4 cut(s) 97, 390, 601, 2329
HindIII AAGCTT 4 cut(s) 275, 545, 740, 1698
HpaI GTTAAC 1 cut(s) 390
HpaII CCGG 4 cut(s) 226, 990, 1921, 2381
HphI GGTGA 5 cut(s) 67, 443, 671, 1061, 2141
Hpy166II GTNNAC 8 cut(s) 58, 97, 390, 601, 679, 1589, 1768, 2329
Hpy188I TCNGA 7 cut(s) 28, 142, 1156, 1162, 1423, 1950, 2449
Hpy8I GTNNAC 8 cut(s) 58, 97, 390, 601, 679, 1589, 1768, 2329
Hpy99I CGWCG 2 cut(s) 218, 236
HpyAV CCTTC 7 cut(s) 277, 1546, 1567, 1821, 1870, 2101, 2243
HpyCH4III ACNGT 7 cut(s) 409, 1336, 1467, 1660, 1975, 2189, 2319
HpyCH4IV ACGT 6 cut(s) 199, 208, 213, 417, 568, 1591
HpySE526I ACGT 6 cut(s) 199, 208, 213, 417, 568, 1591
Hsp92I GRCGYC 2 cut(s) 213, 234
Hsp92II CATG 7 cut(s) 469, 658, 1117, 1529, 1787, 1931, 2272
HspAI GCGC 4 cut(s) 174, 317, 1287, 1310
KspAI GTTAAC 1 cut(s) 390
LmnI GCTCC 7 cut(s) 132, 166, 808, 1240, 1307, 2161, 2272
LweI GCATC 7 cut(s) 367, 568, 1093, 1388, 1410, 2182, 2487
MabI ACCWGGT 1 cut(s) 105
MaeI CTAG 7 cut(s) 932, 1484, 1677, 1722, 1791, 2121, 2513
MaeII ACGT 6 cut(s) 199, 208, 213, 417, 568, 1591
MaeIII GTNAC 6 cut(s) 209, 238, 1291, 1461, 1779, 2116
MbiI CCGCTC 1 cut(s) 249
MboII GAAGA 9 cut(s) 58, 428, 719, 1157, 1193, 2075, 2129, 2429, 2462
MfeI CAATTG 1 cut(s) 1446
MflI RGATCY 8 cut(s) 10, 112, 293, 1071, 1276, 1682, 1915, 2434
MhlI GDGCHC 2 cut(s) 1591, 1645
MlsI TGGCCA 1 cut(s) 1581
MluNI TGGCCA 1 cut(s) 1581
MlyI GAGTC 2 cut(s) 83, 314
MmeI TCCRAC 4 cut(s) 120, 2139, 2208, 2498
Mox20I TGGCCA 1 cut(s) 1581
Mph1103I ATGCAT 1 cut(s) 1403
MroXI GAANNNNTTC 4 cut(s) 1335, 1356, 1437, 2136
MscI TGGCCA 1 cut(s) 1581
MseI TTAA 9 cut(s) 279, 389, 1175, 1218, 1502, 1727, 1893, 1901, 1977
MslI CAYNNNNRTG 1 cut(s) 1530
Msp20I TGGCCA 1 cut(s) 1581
MspA1I CMGCKG 4 cut(s) 302, 825, 950, 1850
MspCI CTTAAG 1 cut(s) 278
MspI CCGG 4 cut(s) 226, 990, 1921, 2381
MspR9I CCNGG 3 cut(s) 107, 227, 1921
MunI CAATTG 1 cut(s) 1446
MvaI CCWGG 1 cut(s) 107
MvnI CGCG 1 cut(s) 192
NciI CCSGG 2 cut(s) 227, 1921
NcoI CCATGG 1 cut(s) 654
NdeI CATATG 1 cut(s) 1207
NlaIII CATG 7 cut(s) 469, 658, 1117, 1529, 1787, 1931, 2272
NlaIV GGNNCC 8 cut(s) 18, 30, 80, 295, 958, 1812, 2163, 2254
NmeAIII GCCGAG 2 cut(s) 41, 230
NmuCI GTSAC 3 cut(s) 209, 238, 1779
NsiI ATGCAT 1 cut(s) 1403
NspI RCATGY 1 cut(s) 1787
NspV TTCGAA 1 cut(s) 634
PaeR7I CTCGAG 2 cut(s) 116, 161
PaqCI CACCTGC 1 cut(s) 2411
PceI AGGCCT 1 cut(s) 2111
PciI ACATGT 1 cut(s) 1783
PcsI WCGNNNNNNNCGW 1 cut(s) 205
PdmI GAANNNNTTC 4 cut(s) 1335, 1356, 1437, 2136
PflFI GACNNNGTC 2 cut(s) 92, 236
PfoI TCCNGGA 1 cut(s) 225
PleI GAGTC 2 cut(s) 83, 313
PmaCI CACGTG 2 cut(s) 200, 209
PmlI CACGTG 2 cut(s) 200, 209
PpsI GAGTC 2 cut(s) 83, 313
Ppu21I YACGTR 3 cut(s) 200, 209, 1592
PscI ACATGT 1 cut(s) 1783
Psp6I CCWGG 1 cut(s) 105
PspCI CACGTG 2 cut(s) 200, 209
PspFI CCCAGC 2 cut(s) 383, 1268
PspGI CCWGG 1 cut(s) 105
PspN4I GGNNCC 8 cut(s) 18, 30, 80, 295, 958, 1812, 2163, 2254
PspPI GGNCC 7 cut(s) 17, 28, 957, 1626, 1768, 2052, 2383
PspXI VCTCGAGB 1 cut(s) 161
PsrI GAACNNNNNNTAC 2 cut(s) 1980, 2012
PstNI CAGNNNCTG 1 cut(s) 1160
PsuI RGATCY 8 cut(s) 10, 112, 293, 1071, 1276, 1682, 1915, 2434
PsyI GACNNNGTC 2 cut(s) 92, 236
PvuII CAGCTG 4 cut(s) 302, 825, 950, 1850
RsaI GTAC 3 cut(s) 1374, 2013, 2294
RsaNI GTAC 3 cut(s) 1373, 2012, 2293
RseI CAYNNNNRTG 1 cut(s) 1530
SalI GTCGAC 1 cut(s) 95
SaqAI TTAA 9 cut(s) 279, 389, 1175, 1218, 1502, 1727, 1893, 1901, 1977
Sau96I GGNCC 7 cut(s) 17, 28, 957, 1626, 1768, 2052, 2383
SchI GAGTC 2 cut(s) 83, 314
ScrFI CCNGG 3 cut(s) 107, 227, 1921
SduI GDGCHC 2 cut(s) 1591, 1645
SexAI ACCWGGT 1 cut(s) 105
SfaNI GCATC 7 cut(s) 367, 568, 1093, 1388, 1410, 2182, 2487
SfcI CTRYAG 1 cut(s) 309
Sfr274I CTCGAG 2 cut(s) 116, 161
SfuI TTCGAA 1 cut(s) 634
SinI GGWCC 6 cut(s) 17, 28, 1626, 1768, 2052, 2383
SlaI CTCGAG 2 cut(s) 116, 161
SmiMI CAYNNNNRTG 1 cut(s) 1530
SmlI CTYRAG 7 cut(s) 116, 161, 278, 527, 609, 759, 2441
SmoI CTYRAG 7 cut(s) 116, 161, 278, 527, 609, 759, 2441
SseBI AGGCCT 1 cut(s) 2111
SsiI CCGC 9 cut(s) 190, 247, 314, 619, 807, 1855, 1959, 2171, 2500
SspI AATATT 2 cut(s) 585, 1138
SspMI CTAG 7 cut(s) 932, 1484, 1677, 1722, 1791, 2121, 2513
StuI AGGCCT 1 cut(s) 2111
StyD4I CCNGG 3 cut(s) 105, 225, 1919
StyI CCWWGG 2 cut(s) 654, 1836
TaaI ACNGT 7 cut(s) 409, 1336, 1467, 1660, 1975, 2189, 2319
TaiI ACGT 6 cut(s) 202, 211, 216, 420, 571, 1594
TaqI TCGA 8 cut(s) 96, 117, 162, 270, 634, 1604, 1882, 2305
TatI WGTACW 2 cut(s) 1372, 2292
TauI GCSGC 4 cut(s) 317, 1858, 1961, 2503
Tru1I TTAA 9 cut(s) 279, 389, 1175, 1218, 1502, 1727, 1893, 1901, 1977
Tru9I TTAA 9 cut(s) 279, 389, 1175, 1218, 1502, 1727, 1893, 1901, 1977
TscAI CASTG 7 cut(s) 735, 790, 1200, 2032, 2101, 2194, 2263
TseFI GTSAC 3 cut(s) 209, 238, 1779
Tsp45I GTSAC 3 cut(s) 209, 238, 1779
TspDTI ATGAA 6 cut(s) 137, 1224, 1446, 1916, 1995, 2220
TspGWI ACGGA 3 cut(s) 9, 1815, 2315
TspRI CASTG 7 cut(s) 735, 790, 1200, 2032, 2101, 2194, 2263
Tth111I GACNNNGTC 2 cut(s) 92, 236
Vha464I CTTAAG 1 cut(s) 278
VneI GTGCAC 1 cut(s) 1587
VpaK11BI GGWCC 6 cut(s) 17, 28, 1626, 1768, 2052, 2383
XagI CCTNNNNNAGG 1 cut(s) 1129
XapI RAATTY 4 cut(s) 503, 624, 835, 911
XbaI TCTAGA 1 cut(s) 2512
XceI RCATGY 1 cut(s) 1787
XhoI CTCGAG 2 cut(s) 116, 161
XmiI GTMKAC 1 cut(s) 96
XmnI GAANNNNTTC 4 cut(s) 1335, 1356, 1437, 2136
XspI CTAG 7 cut(s) 932, 1484, 1677, 1722, 1791, 2121, 2513
ZraI GACGTC 1 cut(s) 214
Zsp2I ATGCAT 1 cut(s) 1403
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.