AT5G54800

Glucose-6-phosphate phosphate translocator 1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0015019
Physical Location & Seq
Forward (+)
22261134 .. 22263936
2803 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G54800.1

Sequence Viewer

Length: 1167 bp
ATGGTTTTATCGGTGAAGCAAACACTCTCTCCGAAAATCGGACTTTTCCGACGAAACCCTTCATCCTCACTAGGAAGATCTCCTGTTTCTCTCTCGTTTCCATCGACGGAGCTTCCAAAACGCACCGTTTTAGCCGTGTCAAAGCCGCTTCATCTCTCTTCTTCTCTGAGAGCTAAGTCTCCGGTAGTGAGATGTGAAGCTTATGAAGCTGACCGATCAGAGCCTCATCCGATCGGTGATGATGCTGCGGCGGCGGAAACGAAATCAGAGGCGGCTAAGAAATTGAAGATCGGGATTTACTTTGCTACTTGGTGGGCTTTGAACGTTGTGTTCAATATCTACAACAAGAAGGTCTTGAACGCTTATCCTTACCCATGGCTTACCTCGACGCTTTCTCTTGCCGCTGGTTCGTTGATGATGCTTATCTCTTGGGCTGTTGGGATCGTTGAGACTCCCAAGACGGATTTTGATTTCTGGAAAACTCTTTTTCCGGTTGCTGTGGCACACACAATTGGTCATGTGGCTGCAACGGTGAGTATGTCAAAGGTTGCTGTTTCTTTCACTCACATCATCAAGAGTGGTGAACCTGCGTTTAGTGTGCTTGTCTCGAGGTTTATTTTGGGTGAAACCTTCCCTACTTCGGTTTACTTGTCTCTCATTCCAATCATTGGTGGTTGCGCTCTGTCTGCCCTTACCGAGCTTAACTTCAACATGATTGGTTTCATGGGAGCTATGATTTCGAACTTGGCTTTCGTGTTCCGTAACATCTTCTCGAAGAAGGGAATGAAGGGAAAGTCTGTGAGCGGGATGAACTACTACGCCTGTCTCTCAATGCTGTCCCTATTGATCCTCACTCCCTTTGCCATTGCTGTTGAAGGACCTCAGATGTGGGTCGATGGCTGGCAGACAGCGCTCGCTACTGTCGGACCACAGTTTGTCTGGTGGGTGGTTGCGCAGAGTGTGTTCTATCACCTCTACAACCAAGTGTCTTACATGTCTTTAGACCAAATCTCTCCCTTGACGTTTAGTGTTGGTAACACCATGAAACGTATCTCCGTCATTGTCTCCTCCATCATTATCTTCCGCACTCCAGTCCAGCCCGTCAATGCTCTTGGAGCAGCCATTGCTATCCTTGGAACCTTCTTGTATTCCCAGGCAAAGCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0003006 GO:0003674 GO:0005215 GO:0005315 GO:0005342 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006811 GO:0006820 GO:0006996 GO:0007033 GO:0007275 GO:0008028 GO:0008150 GO:0008152 GO:0008509 GO:0008514 GO:0008643 GO:0009314 GO:0009416 GO:0009536 GO:0009553 GO:0009555 GO:0009605 GO:0009607 GO:0009624 GO:0009628 GO:0009642 GO:0009643 GO:0009743 GO:0009744 GO:0009746 GO:0009749 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010033 GO:0010109 GO:0010152 GO:0010154 GO:0015075 GO:0015120 GO:0015144 GO:0015152 GO:0015291 GO:0015318 GO:0015605 GO:0015711 GO:0015712 GO:0015713 GO:0015714 GO:0015717 GO:0015718 GO:0015748 GO:0015760 GO:0015849 GO:0015979 GO:0016020 GO:0016043 GO:0019222 GO:0019904 GO:0021700 GO:0022414 GO:0022804 GO:0022857 GO:0031090 GO:0031323 GO:0032501 GO:0032502 GO:0034219 GO:0034220 GO:0034284 GO:0034285 GO:0034389 GO:0035436 GO:0042221 GO:0042873 GO:0042879 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046942 GO:0046943 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0061458 GO:0065007 GO:0071702 GO:0071840 GO:0071917 GO:0080167 GO:0098588 GO:0098656 GO:0098805 GO:1901264 GO:1901505 GO:1901700 GO:1903825 GO:1905039
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPT

Protein Analysis

388

Amino Acids

42.33

Weight (kDa)

9.67

Isoelectric Point (pI)

42.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPT PF03151 95 - 384 1.7e-116 Triose-phosphate Transporter family
EamA PF00892 102 - 229 1.9e-07 EamA-like transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015019)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G54800
fragaria_vesca FvH4_3g22090 FvH4_3g22090
malus_domestica MD03G1208900.v1.1
prunus_persica Prupe.4G207800_v2.0.a1 Prupe.4G207800_v2.0.a1
pyrus_communis pycom03g15790 pycom11g19730
rosa_chinensis RchiOBHm_Chr5g0037901
rosa_laevigata RLG00000033821
rosa_multiflora Rmu_sc0005416.1_g000038
rosa_roxburghii Rroxscaffold_1G00043000
rosa_rugosa Rorug05G0168800
rosa_samantha Rh5AG257500 Rh5BG260100
rosa_wichuraiana Rw5G023860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 954
Acc36I ACCTGC 1 cut(s) 595
AccB7I CCANNNNNTGG 1 cut(s) 668
AccBSI CCGCTC 1 cut(s) 804
AciI CCGC 8 cut(s) 146, 248, 251, 254, 272, 402, 804, 1084
AclI AACGTT 1 cut(s) 324
AclWI GGATC 2 cut(s) 449, 841
AfeI AGCGCT 1 cut(s) 912
AfiI CCNNNNNNNGG 3 cut(s) 38, 640, 668
AflIII ACRYGT 1 cut(s) 993
AgsI TTSAA 6 cut(s) 286, 322, 334, 358, 709, 875
AjnI CCWGG 1 cut(s) 1152
AluBI AGCT 7 cut(s) 112, 173, 200, 209, 700, 731, 1162
AluI AGCT 7 cut(s) 112, 173, 200, 209, 700, 731, 1162
Alw26I GTCTC 6 cut(s) 183, 443, 610, 657, 830, 1069
AlwI GGATC 2 cut(s) 449, 841
Ama87I CYCGRG 1 cut(s) 607
Aor51HI AGCGCT 1 cut(s) 912
ApeKI GCWGC 3 cut(s) 245, 524, 1118
Asp700I GAANNNNTTC 1 cut(s) 58
AspLEI GCGC 3 cut(s) 680, 913, 955
AspS9I GGNCC 2 cut(s) 878, 926
AsuHPI GGTGA 6 cut(s) 25, 248, 544, 593, 635, 962
AsuII TTCGAA 1 cut(s) 740
AvaI CYCGRG 1 cut(s) 607
AvaII GGWCC 2 cut(s) 878, 926
BbvI GCAGC 3 cut(s) 232, 511, 1130
BccI CCATC 3 cut(s) 109, 890, 1079
BceAI ACGGC 1 cut(s) 119
BciT130I CCWGG 1 cut(s) 1154
BcoDI GTCTC 6 cut(s) 183, 443, 610, 657, 830, 1069
BfaI CTAG 1 cut(s) 71
BfoI RGCGCY 1 cut(s) 914
BfuAI ACCTGC 1 cut(s) 595
BglII AGATCT 1 cut(s) 77
BisI GCNGC 8 cut(s) 146, 246, 249, 252, 273, 402, 525, 1119
BlsI GCNGC 8 cut(s) 147, 247, 250, 253, 274, 403, 526, 1120
Bme1390I CCNGG 1 cut(s) 1154
Bme18I GGWCC 2 cut(s) 878, 926
BmeT110I CYCGRG 1 cut(s) 607
BmgT120I GGNCC 2 cut(s) 878, 926
BmiI GGNNCC 1 cut(s) 1138
BmrFI CCNGG 1 cut(s) 1154
BmsI GCATC 2 cut(s) 232, 408
BpmI CTGGAG 1 cut(s) 1074
Bpu14I TTCGAA 1 cut(s) 740
BsaBI GATNNNNATC 1 cut(s) 422
BsaJI CCNNGG 3 cut(s) 374, 1132, 1152
BsaWI WCCGGW 2 cut(s) 181, 490
BsaXI ACNNNNNCTCC 2 cut(s) 13, 43
Bsc4I CCNNNNNNNGG 3 cut(s) 38, 640, 668
Bse1I ACTGG 1 cut(s) 1091
Bse3DI GCAATG 2 cut(s) 864, 1122
Bse8I GATNNNNATC 1 cut(s) 422
BseBI CCWGG 1 cut(s) 1154
BseDI CCNNGG 3 cut(s) 374, 1132, 1152
BseGI GGATG 3 cut(s) 62, 226, 813
BseJI GATNNNNATC 1 cut(s) 422
BseLI CCNNNNNNNGG 3 cut(s) 38, 640, 668
BseMI GCAATG 2 cut(s) 864, 1122
BseMII CTCAG 2 cut(s) 158, 896
BseNI ACTGG 1 cut(s) 1091
BseRI GAGGAG 1 cut(s) 1057
BseXI GCAGC 3 cut(s) 232, 511, 1130
Bsh1285I CGRYCG 1 cut(s) 234
BsiEI CGRYCG 1 cut(s) 234
BsiHKCI CYCGRG 1 cut(s) 607
BsiSI CCGG 2 cut(s) 182, 491
BslFI GGGAC 1 cut(s) 823
BslI CCNNNNNNNGG 3 cut(s) 38, 640, 668
BsmAI GTCTC 6 cut(s) 183, 443, 610, 657, 830, 1069
BsmFI GGGAC 1 cut(s) 823
BsoBI CYCGRG 1 cut(s) 607
Bsp119I TTCGAA 1 cut(s) 740
Bsp143I GATC 6 cut(s) 77, 215, 231, 288, 441, 846
Bsp19I CCATGG 1 cut(s) 374
BspACI CCGC 8 cut(s) 146, 248, 251, 254, 272, 402, 804, 1084
BspCNI CTCAG 2 cut(s) 159, 895
BspLI GGNNCC 1 cut(s) 1138
BspMI ACCTGC 1 cut(s) 595
BspPI GGATC 2 cut(s) 449, 841
BspT104I TTCGAA 1 cut(s) 740
BsrBI CCGCTC 1 cut(s) 804
BsrDI GCAATG 2 cut(s) 864, 1122
BsrI ACTGG 1 cut(s) 1091
BssECI CCNNGG 3 cut(s) 374, 1132, 1152
BssMI GATC 6 cut(s) 77, 215, 231, 288, 441, 846
BssT1I CCWWGG 2 cut(s) 374, 1132
Bst2UI CCWGG 1 cut(s) 1154
Bst4CI ACNGT 4 cut(s) 127, 532, 922, 933
Bst6I CTCTTC 1 cut(s) 163
BstAPI GCANNNNNTGC 1 cut(s) 1124
BstBI TTCGAA 1 cut(s) 740
BstC8I GCNNGC 2 cut(s) 902, 915
BstDEI CTNAG 4 cut(s) 167, 174, 276, 882
BstDSI CCRYGG 1 cut(s) 374
BstF5I GGATG 3 cut(s) 62, 226, 813
BstH2I RGCGCY 1 cut(s) 914
BstHHI GCGC 3 cut(s) 680, 913, 955
BstKTI GATC 6 cut(s) 80, 218, 234, 291, 444, 849
BstMAI GTCTC 6 cut(s) 183, 443, 610, 657, 830, 1069
BstMBI GATC 6 cut(s) 77, 215, 231, 288, 441, 846
BstMCI CGRYCG 1 cut(s) 234
BstMWI GCNNNNNNNGC 6 cut(s) 206, 251, 686, 910, 1115, 1124
BstNI CCWGG 1 cut(s) 1154
BstNSI RCATGY 1 cut(s) 997
BstSCI CCNGG 1 cut(s) 1152
BstV1I GCAGC 3 cut(s) 232, 511, 1130
BstX2I RGATCY 1 cut(s) 77
BstYI RGATCY 1 cut(s) 77
BtgI CCRYGG 1 cut(s) 374
BtsCI GGATG 3 cut(s) 62, 226, 813
BveI ACCTGC 1 cut(s) 595
Cac8I GCNNGC 2 cut(s) 902, 915
CfoI GCGC 3 cut(s) 680, 913, 955
Cfr13I GGNCC 2 cut(s) 878, 926
CseI GACGC 1 cut(s) 397
CviAII CATG 6 cut(s) 375, 518, 712, 724, 994, 1042
DdeI CTNAG 4 cut(s) 167, 174, 276, 882
DpnI GATC 6 cut(s) 79, 217, 233, 290, 443, 848
DpnII GATC 6 cut(s) 77, 215, 231, 288, 441, 846
Eam1104I CTCTTC 1 cut(s) 163
EarI CTCTTC 1 cut(s) 163
EciI GGCGGA 1 cut(s) 269
Eco130I CCWWGG 2 cut(s) 374, 1132
Eco47I GGWCC 2 cut(s) 878, 926
Eco47III AGCGCT 1 cut(s) 912
Eco88I CYCGRG 1 cut(s) 607
EcoO109I RGGNCCY 1 cut(s) 878
EcoRII CCWGG 1 cut(s) 1152
EcoT14I CCWWGG 2 cut(s) 374, 1132
ErhI CCWWGG 2 cut(s) 374, 1132
FaeI CATG 6 cut(s) 378, 521, 715, 727, 997, 1045
FaiI YATR 9 cut(s) 204, 376, 519, 539, 713, 725, 734, 995, 1043
FalI AAGNNNNNCTT 2 cut(s) 338, 370
FaqI GGGAC 1 cut(s) 823
FatI CATG 6 cut(s) 374, 517, 711, 723, 993, 1041
FauI CCCGC 1 cut(s) 797
Fnu4HI GCNGC 8 cut(s) 146, 246, 249, 252, 273, 402, 525, 1119
FokI GGATG 3 cut(s) 49, 213, 820
Fsp4HI GCNGC 8 cut(s) 146, 246, 249, 252, 273, 402, 525, 1119
FspBI CTAG 1 cut(s) 71
FspI TGCGCA 1 cut(s) 954
GlaI GCGC 3 cut(s) 679, 912, 954
GluI GCNGC 8 cut(s) 146, 246, 249, 252, 273, 402, 525, 1119
GsuI CTGGAG 1 cut(s) 1074
HaeII RGCGCY 1 cut(s) 914
HapII CCGG 2 cut(s) 182, 491
HgaI GACGC 1 cut(s) 397
HhaI GCGC 3 cut(s) 680, 913, 955
Hin1II CATG 6 cut(s) 378, 521, 715, 727, 997, 1045
Hin6I GCGC 3 cut(s) 678, 911, 953
HinP1I GCGC 3 cut(s) 678, 911, 953
HindIII AAGCTT 1 cut(s) 198
HinfI GANTC 1 cut(s) 451
HpaII CCGG 2 cut(s) 182, 491
HphI GGTGA 6 cut(s) 25, 248, 544, 593, 635, 962
Hpy166II GTNNAC 2 cut(s) 584, 646
Hpy188III TCNNGA 6 cut(s) 292, 355, 475, 574, 607, 772
Hpy8I GTNNAC 2 cut(s) 584, 646
Hpy99I CGWCG 3 cut(s) 54, 109, 391
HpyAV CCTTC 7 cut(s) 69, 343, 640, 772, 781, 869, 1150
HpyCH4III ACNGT 4 cut(s) 127, 532, 922, 933
HpyCH4IV ACGT 3 cut(s) 324, 1022, 1048
HpyCH4V TGCA 1 cut(s) 527
HpyF10VI GCNNNNNNNGC 6 cut(s) 206, 251, 686, 910, 1115, 1124
HpyF3I CTNAG 4 cut(s) 167, 174, 276, 882
HpySE526I ACGT 3 cut(s) 324, 1022, 1048
Hsp92II CATG 6 cut(s) 378, 521, 715, 727, 997, 1045
HspAI GCGC 3 cut(s) 678, 911, 953
Kzo9I GATC 6 cut(s) 77, 215, 231, 288, 441, 846
LmnI GCTCC 3 cut(s) 109, 728, 1115
Lsp1109I GCAGC 3 cut(s) 232, 511, 1130
LweI GCATC 2 cut(s) 232, 408
MaeI CTAG 1 cut(s) 71
MaeII ACGT 3 cut(s) 324, 1022, 1048
MaeIII GTNAC 2 cut(s) 761, 1034
MalI GATC 6 cut(s) 79, 217, 233, 290, 443, 848
MbiI CCGCTC 1 cut(s) 804
MboI GATC 6 cut(s) 77, 215, 231, 288, 441, 846
MboII GAAGA 7 cut(s) 87, 150, 153, 298, 760, 787, 1072
MfeI CAATTG 1 cut(s) 510
MflI RGATCY 1 cut(s) 77
MluCI AATT 2 cut(s) 281, 510
MlyI GAGTC 1 cut(s) 445
MmeI TCCRAC 2 cut(s) 73, 904
MnlI CCTC 9 cut(s) 76, 234, 262, 394, 603, 860, 891, 983, 1078
MroXI GAANNNNTTC 1 cut(s) 58
MseI TTAA 1 cut(s) 702
MspA1I CMGCKG 1 cut(s) 404
MspI CCGG 2 cut(s) 182, 491
MspR9I CCNGG 1 cut(s) 1154
MunI CAATTG 1 cut(s) 510
MvaI CCWGG 1 cut(s) 1154
MwoI GCNNNNNNNGC 6 cut(s) 206, 251, 686, 910, 1115, 1124
NcoI CCATGG 1 cut(s) 374
NdeII GATC 6 cut(s) 77, 215, 231, 288, 441, 846
NlaIII CATG 6 cut(s) 378, 521, 715, 727, 997, 1045
NlaIV GGNNCC 1 cut(s) 1138
NsbI TGCGCA 1 cut(s) 954
NspI RCATGY 1 cut(s) 997
NspV TTCGAA 1 cut(s) 740
PaeR7I CTCGAG 1 cut(s) 607
PciI ACATGT 1 cut(s) 993
PcsI WCGNNNNNNNCGW 1 cut(s) 101
PdmI GAANNNNTTC 1 cut(s) 58
PflMI CCANNNNNTGG 1 cut(s) 668
PkrI GCNGC 8 cut(s) 147, 247, 250, 253, 274, 403, 526, 1120
Ple19I CGATCG 1 cut(s) 234
PleI GAGTC 1 cut(s) 445
PpsI GAGTC 1 cut(s) 445
PpuMI RGGWCCY 1 cut(s) 878
PscI ACATGT 1 cut(s) 993
Psp1406I AACGTT 1 cut(s) 324
Psp5II RGGWCCY 1 cut(s) 878
Psp6I CCWGG 1 cut(s) 1152
PspGI CCWGG 1 cut(s) 1152
PspN4I GGNNCC 1 cut(s) 1138
PspPI GGNCC 2 cut(s) 878, 926
PspPPI RGGWCCY 1 cut(s) 878
PsuI RGATCY 1 cut(s) 77
PvuI CGATCG 1 cut(s) 234
SaqAI TTAA 1 cut(s) 702
SatI GCNGC 8 cut(s) 146, 246, 249, 252, 273, 402, 525, 1119
Sau3AI GATC 6 cut(s) 77, 215, 231, 288, 441, 846
Sau96I GGNCC 2 cut(s) 878, 926
SchI GAGTC 1 cut(s) 445
ScrFI CCNGG 1 cut(s) 1154
SfaNI GCATC 2 cut(s) 232, 408
Sfr274I CTCGAG 1 cut(s) 607
SfuI TTCGAA 1 cut(s) 740
SinI GGWCC 2 cut(s) 878, 926
SlaI CTCGAG 1 cut(s) 607
SmlI CTYRAG 1 cut(s) 607
SmoI CTYRAG 1 cut(s) 607
Sse9I AATT 2 cut(s) 281, 510
SsiI CCGC 8 cut(s) 146, 248, 251, 254, 272, 402, 804, 1084
SspMI CTAG 1 cut(s) 71
StyD4I CCNGG 1 cut(s) 1152
StyI CCWWGG 2 cut(s) 374, 1132
TaaI ACNGT 4 cut(s) 127, 532, 922, 933
TaiI ACGT 3 cut(s) 327, 1025, 1051
TaqI TCGA 6 cut(s) 104, 386, 608, 740, 773, 894
TaqII GACCGA 1 cut(s) 228
TasI AATT 2 cut(s) 281, 510
TauI GCSGC 5 cut(s) 148, 251, 254, 275, 404
Tru1I TTAA 1 cut(s) 702
Tru9I TTAA 1 cut(s) 702
TseI GCWGC 3 cut(s) 245, 524, 1118
TspDTI ATGAA 7 cut(s) 51, 140, 219, 712, 800, 824, 1058
TspGWI ACGGA 4 cut(s) 122, 476, 749, 1045
Van91I CCANNNNNTGG 1 cut(s) 668
VpaK11BI GGWCC 2 cut(s) 878, 926
XceI RCATGY 1 cut(s) 997
XcmI CCANNNNNNNNNTGG 1 cut(s) 936
XhoI CTCGAG 1 cut(s) 607
XmnI GAANNNNTTC 1 cut(s) 58
XspI CTAG 1 cut(s) 71
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.