AT5G59010

serine threonine-protein kinase At5g41260

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
23820034 .. 23823317
3284 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G59010.2

Sequence Viewer

Length: 1470 bp
ATGGGACCTCGTTGCTCTAAGCTCTCTCTCTGTTGGTGGCCGACCCATCTCAAATCAACTCACAACGAAGCTTCTGATCTAGATAACGGAACGGACGATTTGCCGTCGTTTACGGAGTTTAGTTTCGACCAACTACGAGCTGCTACTTGTGGATTCTCTACAGACAGTATTGTCTCCGAACATGGTGTTAAAGCTCCTAATGTTGTGTATAAAGGCAGACTTGAAGATGACCGATGGATCGCTGTTAAACGATTCAATAGATCCGCTTGGCCTGATACTCGTCAATTTCTTGAAGAAGCAAAAGCTGTGGGGCAGTTGAGGAATGAGAGGTTGGCGAATTTGATTGGATTCTGTTGTGAAGGAGACGAGAGATTGCTCGTTGCTGAGTTTATGCCTTTTGAAACTCTCTCGAAGCATCTCTTTCACTGGGATAGTCAGCCAATGAAGTGGTCTATGAGGTTGAGAGTGGCTTTGTATCTTGCACAAGCACTTGAGTATTGTAGCAGCAAAGGTCGCGCCTTGTACCACGATCTTAATGCTTACAGGATCTTGTTTGACCAGGATGGTAACCCGAGATTATCTTGCTTTGGTCTTATGAAGAATAGTAGGGATGGGAAGAGTTACAGTACAAATTTGGCTTTCACACCTCCTGAATACCTAAGAACAGGGAGAGTGATTCCGGAGAGTGTGGTCTACAGCTTCGGAACGCTGTTGCTAGATCTTCTCAGCGGCAAACACATACCACCAAGCCATGCGCTTGATCTGATTCGTGGGAAGAATTTCCTGATGCTGATGGACTCGTGTCTAGATGGCCATTTCTCAAACGATGATGGAACCGATTTGGTTCGTTTAGCTTCCCGTTGTTTGCAGTATGAAGCTCGTGAAAGGCCAAATGTGAAATCTCTCGTGTCCTCACTCGCTCCTCTTCAGAAAGAAACTGATATTCCGTCTCATGTTTTAATGGGGATTCCACATGGAGCTGCTTCTCCAAAGGAAACAACTTCGCTTACCCCTCTTGGTGACGCTTGTTCACGACATGATCTCACAGCAATACATGAAATTCTCGAAAAGGTTGGATACAAAGATGACGAGGGTGTAGCAAATGAGCTCTCGTTCCAAGTGTGGACCGACCAGATTCAGGAGACTCTAAACTCCAAGAAACAAGGAGATGCTGCGTTCAAAGGCAAAGACTTTGTCACTGCTGTTGAATGTTACACGCAGTTCATCGAAGATGGCACAATGGTATCGCCAACAGTTTTTGCAAGGAGGTGTTTGTGTTATCTGATGAGCAATATGCCTCAAGAGGCTCTTGGTGATGCAATGCAGGCGCAAGTAGTGTCTCCTGAATGGCCAACGGCTTTCTATCTTCAGGCCGCTGCTCTCTTCAGCCTTGGAATGGATAAAGACGCCTGTGAAACCCTAAAAGATGGAACTTCCTTGGAAGCCAAGAAACATAACAACAGAAACTGA

Protein Analysis

489

Amino Acids

54.85

Weight (kDa)

5.74

Isoelectric Point (pI)

37.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 14 - 176 8.6e-13 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 25 - 174 8.8e-12 Protein kinase domain
TPR_BSK1_C PF25575 211 - 328 4.5e-65 Serine/threonine-protein kinase BSK1-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 170
AccI GTMKAC 1 cut(s) 693
AccII CGCG 1 cut(s) 516
AccIII TCCGGA 1 cut(s) 679
AciI CCGC 3 cut(s) 264, 729, 1374
AclWI GGATC 3 cut(s) 245, 255, 554
AcoI YGGCCR 3 cut(s) 38, 811, 1349
AcsI RAATTY 4 cut(s) 337, 631, 778, 1059
AcuI CTGAAG 3 cut(s) 911, 1352, 1369
AcyI GRCGYC 1 cut(s) 1407
AfaI GTAC 2 cut(s) 524, 628
AfiI CCNNNNNNNGG 2 cut(s) 1138, 1396
AgsI TTSAA 6 cut(s) 224, 256, 293, 401, 1180, 1208
AjnI CCWGG 1 cut(s) 558
AjuI GAANNNNNNNTTGG 2 cut(s) 314, 346
Alw21I GWGCWC 1 cut(s) 1110
Alw26I GTCTC 5 cut(s) 178, 357, 954, 1136, 1344
AlwI GGATC 3 cut(s) 245, 255, 554
AlwNI CAGNNNCTG 1 cut(s) 1467
Ama87I CYCGRG 1 cut(s) 571
Aor13HI TCCGGA 1 cut(s) 679
AoxI GGCC 6 cut(s) 38, 269, 811, 887, 1349, 1371
ApeKI GCWGC 5 cut(s) 140, 504, 980, 1172, 1376
ApoI RAATTY 4 cut(s) 337, 631, 778, 1059
ArsI GACNNNNNNTTYG 2 cut(s) 1179, 1211
Asp700I GAANNNNTTC 1 cut(s) 779
AspLEI GCGC 3 cut(s) 518, 757, 1330
AspS9I GGNCC 2 cut(s) 5, 1125
AsuHPI GGTGA 2 cut(s) 1031, 1325
AvaI CYCGRG 1 cut(s) 571
AvaII GGWCC 2 cut(s) 5, 1125
BaeI ACNNNNGTAYC 2 cut(s) 1227, 1260
BalI TGGCCA 2 cut(s) 813, 1351
BanII GRGCYC 1 cut(s) 1110
BauI CACGAG 3 cut(s) 799, 879, 905
Bbv12I GWGCWC 1 cut(s) 1110
BbvI GCAGC 5 cut(s) 127, 516, 967, 1159, 1363
BccI CCATC 9 cut(s) 54, 228, 557, 605, 787, 803, 824, 1226, 1421
BceAI ACGGC 2 cut(s) 88, 1371
BcgI CGANNNNNNTGC 2 cut(s) 518, 552
BciT130I CCWGG 1 cut(s) 560
BciVI GTATCC 1 cut(s) 1070
BcoDI GTCTC 5 cut(s) 178, 357, 954, 1136, 1344
BfaI CTAG 3 cut(s) 80, 716, 806
BfmI CTRYAG 2 cut(s) 159, 694
BfuI GTATCC 1 cut(s) 1070
BglII AGATCT 1 cut(s) 718
BisI GCNGC 7 cut(s) 141, 505, 730, 981, 1173, 1374, 1377
BlsI GCNGC 7 cut(s) 142, 506, 731, 982, 1174, 1375, 1378
Bme1390I CCNGG 1 cut(s) 560
Bme18I GGWCC 2 cut(s) 5, 1125
BmeT110I CYCGRG 1 cut(s) 571
BmgT120I GGNCC 2 cut(s) 5, 1125
BmiI GGNNCC 2 cut(s) 6, 835
BmrFI CCNGG 1 cut(s) 560
BmrI ACTGGG 1 cut(s) 436
BmsI GCATC 4 cut(s) 424, 777, 1159, 1306
BmuI ACTGGG 1 cut(s) 436
BoxI GACNNNNGTC 1 cut(s) 801
BpuEI CTTGAG 2 cut(s) 512, 1284
BsaHI GRCGYC 1 cut(s) 1407
BsaJI CCNNGG 2 cut(s) 1390, 1437
BsaWI WCCGGW 1 cut(s) 679
Bsc4I CCNNNNNNNGG 2 cut(s) 1138, 1396
Bse1I ACTGG 1 cut(s) 431
Bse3DI GCAATG 1 cut(s) 1326
BseAI TCCGGA 1 cut(s) 679
BseBI CCWGG 1 cut(s) 560
BseDI CCNNGG 2 cut(s) 1390, 1437
BseGI GGATG 2 cut(s) 568, 616
BseLI CCNNNNNNNGG 2 cut(s) 1138, 1396
BseMI GCAATG 1 cut(s) 1326
BseMII CTCAG 2 cut(s) 375, 739
BseNI ACTGG 1 cut(s) 431
BseRI GAGGAG 1 cut(s) 912
BseXI GCAGC 5 cut(s) 127, 516, 967, 1159, 1363
Bsh1236I CGCG 1 cut(s) 516
BshFI GGCC 6 cut(s) 40, 271, 813, 889, 1351, 1373
BsiHKAI GWGCWC 1 cut(s) 1110
BsiHKCI CYCGRG 1 cut(s) 571
BsiSI CCGG 1 cut(s) 680
BslFI GGGAC 1 cut(s) 18
BslI CCNNNNNNNGG 2 cut(s) 1138, 1396
BsmAI GTCTC 5 cut(s) 178, 357, 954, 1136, 1344
BsmBI CGTCTC 2 cut(s) 357, 954
BsmFI GGGAC 1 cut(s) 18
BsnI GGCC 6 cut(s) 40, 271, 813, 889, 1351, 1373
BsoBI CYCGRG 1 cut(s) 571
Bsp1286I GDGCHC 1 cut(s) 1110
Bsp13I TCCGGA 1 cut(s) 679
Bsp143I GATC 8 cut(s) 76, 237, 260, 529, 546, 718, 760, 1039
BspACI CCGC 3 cut(s) 264, 729, 1374
BspANI GGCC 6 cut(s) 40, 271, 813, 889, 1351, 1373
BspCNI CTCAG 2 cut(s) 376, 738
BspEI TCCGGA 1 cut(s) 679
BspFNI CGCG 1 cut(s) 516
BspLI GGNNCC 2 cut(s) 6, 835
BspPI GGATC 3 cut(s) 245, 255, 554
BsrDI GCAATG 1 cut(s) 1326
BsrI ACTGG 1 cut(s) 431
BssECI CCNNGG 2 cut(s) 1390, 1437
BssMI GATC 8 cut(s) 76, 237, 260, 529, 546, 718, 760, 1039
BssNI GRCGYC 1 cut(s) 1407
BssSI CACGAG 3 cut(s) 799, 879, 905
BssT1I CCWWGG 2 cut(s) 1390, 1437
Bst2BI CACGAG 3 cut(s) 799, 879, 905
Bst2UI CCWGG 1 cut(s) 560
Bst4CI ACNGT 3 cut(s) 167, 626, 1255
Bst6I CTCTTC 3 cut(s) 611, 930, 1388
BstACI GRCGYC 1 cut(s) 1407
BstC8I GCNNGC 1 cut(s) 1326
BstDEI CTNAG 4 cut(s) 18, 384, 659, 725
BstEII GGTNACC 1 cut(s) 566
BstF5I GGATG 2 cut(s) 568, 616
BstFNI CGCG 1 cut(s) 516
BstHHI GCGC 3 cut(s) 518, 757, 1330
BstKTI GATC 8 cut(s) 79, 240, 263, 532, 549, 721, 763, 1042
BstMAI GTCTC 5 cut(s) 178, 357, 954, 1136, 1344
BstMBI GATC 8 cut(s) 76, 237, 260, 529, 546, 718, 760, 1039
BstMWI GCNNNNNNNGC 2 cut(s) 513, 1325
BstNI CCWGG 1 cut(s) 560
BstPAI GACNNNNGTC 1 cut(s) 801
BstPI GGTNACC 1 cut(s) 566
BstSCI CCNGG 1 cut(s) 558
BstSFI CTRYAG 2 cut(s) 159, 694
BstUI CGCG 1 cut(s) 516
BstV1I GCAGC 5 cut(s) 127, 516, 967, 1159, 1363
BstX2I RGATCY 3 cut(s) 260, 546, 718
BstXI CCANNNNNNTGG 1 cut(s) 447
BstYI RGATCY 3 cut(s) 260, 546, 718
BsuI GTATCC 1 cut(s) 1070
BsuRI GGCC 6 cut(s) 40, 271, 813, 889, 1351, 1373
BtsCI GGATG 2 cut(s) 568, 616
BtsI GCAGTG 1 cut(s) 1197
BtsIMutI CAGTG 2 cut(s) 424, 1197
Cac8I GCNNGC 1 cut(s) 1326
CaiI CAGNNNCTG 1 cut(s) 1467
CfoI GCGC 3 cut(s) 518, 757, 1330
Cfr13I GGNCC 2 cut(s) 5, 1125
CseI GACGC 2 cut(s) 1031, 1415
Csp6I GTAC 2 cut(s) 523, 627
CspCI CAANNNNNGTGG 2 cut(s) 288, 323
CviAII CATG 6 cut(s) 182, 752, 953, 974, 1037, 1055
CviQI GTAC 2 cut(s) 523, 627
DdeI CTNAG 4 cut(s) 18, 384, 659, 725
DpnI GATC 8 cut(s) 78, 239, 262, 531, 548, 720, 762, 1041
DpnII GATC 8 cut(s) 76, 237, 260, 529, 546, 718, 760, 1039
DrdI GACNNNNNNGTC 1 cut(s) 170
DseDI GACNNNNNNGTC 1 cut(s) 170
EaeI YGGCCR 3 cut(s) 38, 811, 1349
Eam1104I CTCTTC 3 cut(s) 611, 930, 1388
EarI CTCTTC 3 cut(s) 611, 930, 1388
Ecl136II GAGCTC 1 cut(s) 1108
Eco130I CCWWGG 2 cut(s) 1390, 1437
Eco24I GRGCYC 1 cut(s) 1110
Eco47I GGWCC 2 cut(s) 5, 1125
Eco53kI GAGCTC 1 cut(s) 1108
Eco57I CTGAAG 3 cut(s) 911, 1352, 1369
Eco88I CYCGRG 1 cut(s) 571
Eco91I GGTNACC 1 cut(s) 566
EcoICRI GAGCTC 1 cut(s) 1108
EcoO109I RGGNCCY 1 cut(s) 5
EcoO65I GGTNACC 1 cut(s) 566
EcoRII CCWGG 1 cut(s) 558
EcoT14I CCWWGG 2 cut(s) 1390, 1437
EcoT38I GRGCYC 1 cut(s) 1110
ErhI CCWWGG 2 cut(s) 1390, 1437
Esp3I CGTCTC 2 cut(s) 357, 954
FaeI CATG 6 cut(s) 185, 755, 956, 977, 1040, 1058
FalI AAGNNNNNCTT 6 cut(s) 204, 236, 404, 436, 1293, 1325
FaqI GGGAC 1 cut(s) 18
FatI CATG 6 cut(s) 181, 751, 952, 973, 1036, 1054
FblI GTMKAC 1 cut(s) 693
Fnu4HI GCNGC 7 cut(s) 141, 505, 730, 981, 1173, 1374, 1377
FokI GGATG 2 cut(s) 575, 623
FriOI GRGCYC 1 cut(s) 1110
Fsp4HI GCNGC 7 cut(s) 141, 505, 730, 981, 1173, 1374, 1377
FspBI CTAG 3 cut(s) 80, 716, 806
GlaI GCGC 3 cut(s) 517, 756, 1329
GluI GCNGC 7 cut(s) 141, 505, 730, 981, 1173, 1374, 1377
HaeIII GGCC 6 cut(s) 40, 271, 813, 889, 1351, 1373
HapII CCGG 1 cut(s) 680
HgaI GACGC 2 cut(s) 1031, 1415
HhaI GCGC 3 cut(s) 518, 757, 1330
Hin1I GRCGYC 1 cut(s) 1407
Hin1II CATG 6 cut(s) 185, 755, 956, 977, 1040, 1058
Hin6I GCGC 3 cut(s) 516, 755, 1328
HinP1I GCGC 3 cut(s) 516, 755, 1328
HindIII AAGCTT 1 cut(s) 69
HinfI GANTC 9 cut(s) 153, 252, 348, 676, 766, 797, 967, 1135, 1144
HpaII CCGG 1 cut(s) 680
HphI GGTGA 2 cut(s) 1031, 1325
Hpy166II GTNNAC 4 cut(s) 111, 694, 1031, 1125
Hpy188I TCNGA 6 cut(s) 76, 178, 704, 765, 930, 1284
Hpy8I GTNNAC 4 cut(s) 111, 694, 1031, 1125
Hpy99I CGWCG 1 cut(s) 109
HpyAV CCTTC 1 cut(s) 353
HpyCH4III ACNGT 3 cut(s) 167, 626, 1255
HpyCH4V TGCA 5 cut(s) 482, 868, 1262, 1319, 1324
HpyF10VI GCNNNNNNNGC 2 cut(s) 513, 1325
HpyF3I CTNAG 4 cut(s) 18, 384, 659, 725
Hsp92I GRCGYC 1 cut(s) 1407
Hsp92II CATG 6 cut(s) 185, 755, 956, 977, 1040, 1058
HspAI GCGC 3 cut(s) 516, 755, 1328
Kpn2I TCCGGA 1 cut(s) 679
Kzo9I GATC 8 cut(s) 76, 237, 260, 529, 546, 718, 760, 1039
LmnI GCTCC 3 cut(s) 199, 925, 977
Lsp1109I GCAGC 5 cut(s) 127, 516, 967, 1159, 1363
LweI GCATC 4 cut(s) 424, 777, 1159, 1306
MaeI CTAG 3 cut(s) 80, 716, 806
MaeIII GTNAC 5 cut(s) 566, 620, 1019, 1195, 1211
MalI GATC 8 cut(s) 78, 239, 262, 531, 548, 720, 762, 1041
MboI GATC 8 cut(s) 76, 237, 260, 529, 546, 718, 760, 1039
MflI RGATCY 3 cut(s) 260, 546, 718
MhlI GDGCHC 1 cut(s) 1110
MlsI TGGCCA 2 cut(s) 813, 1351
MluCI AATT 5 cut(s) 284, 337, 631, 778, 1059
MluNI TGGCCA 2 cut(s) 813, 1351
MlyI GAGTC 2 cut(s) 791, 1138
MmeI TCCRAC 1 cut(s) 1054
Mox20I TGGCCA 2 cut(s) 813, 1351
MroI TCCGGA 1 cut(s) 679
MroXI GAANNNNTTC 1 cut(s) 779
MscI TGGCCA 2 cut(s) 813, 1351
MseI TTAA 4 cut(s) 189, 246, 534, 959
Msp20I TGGCCA 2 cut(s) 813, 1351
MspA1I CMGCKG 2 cut(s) 729, 1376
MspI CCGG 1 cut(s) 680
MspR9I CCNGG 1 cut(s) 560
MvaI CCWGG 1 cut(s) 560
MvnI CGCG 1 cut(s) 516
MwoI GCNNNNNNNGC 2 cut(s) 513, 1325
NdeII GATC 8 cut(s) 76, 237, 260, 529, 546, 718, 760, 1039
NlaIII CATG 6 cut(s) 185, 755, 956, 977, 1040, 1058
NlaIV GGNNCC 2 cut(s) 6, 835
NmuCI GTSAC 2 cut(s) 1019, 1195
PcsI WCGNNNNNNNCGW 1 cut(s) 93
PdmI GAANNNNTTC 1 cut(s) 779
PfeI GAWTC 7 cut(s) 153, 252, 348, 676, 766, 967, 1135
PflFI GACNNNGTC 1 cut(s) 1193
PkrI GCNGC 7 cut(s) 142, 506, 731, 982, 1174, 1375, 1378
PleI GAGTC 2 cut(s) 791, 1138
PpsI GAGTC 2 cut(s) 791, 1138
PpuMI RGGWCCY 1 cut(s) 5
PshAI GACNNNNGTC 1 cut(s) 801
Psp124BI GAGCTC 1 cut(s) 1110
Psp5II RGGWCCY 1 cut(s) 5
Psp6I CCWGG 1 cut(s) 558
PspEI GGTNACC 1 cut(s) 566
PspGI CCWGG 1 cut(s) 558
PspN4I GGNNCC 2 cut(s) 6, 835
PspPI GGNCC 2 cut(s) 5, 1125
PspPPI RGGWCCY 1 cut(s) 5
PstNI CAGNNNCTG 1 cut(s) 1467
PsuI RGATCY 3 cut(s) 260, 546, 718
PsyI GACNNNGTC 1 cut(s) 1193
RsaI GTAC 2 cut(s) 524, 628
RsaNI GTAC 2 cut(s) 523, 627
SacI GAGCTC 1 cut(s) 1110
SaqAI TTAA 4 cut(s) 189, 246, 534, 959
SatI GCNGC 7 cut(s) 141, 505, 730, 981, 1173, 1374, 1377
Sau3AI GATC 8 cut(s) 76, 237, 260, 529, 546, 718, 760, 1039
Sau96I GGNCC 2 cut(s) 5, 1125
SchI GAGTC 2 cut(s) 791, 1138
ScrFI CCNGG 1 cut(s) 560
SduI GDGCHC 1 cut(s) 1110
SfaNI GCATC 4 cut(s) 424, 777, 1159, 1306
SfcI CTRYAG 2 cut(s) 159, 694
SinI GGWCC 2 cut(s) 5, 1125
SmlI CTYRAG 2 cut(s) 491, 1299
SmoI CTYRAG 2 cut(s) 491, 1299
Sse9I AATT 5 cut(s) 284, 337, 631, 778, 1059
SsiI CCGC 3 cut(s) 264, 729, 1374
SspMI CTAG 3 cut(s) 80, 716, 806
SstI GAGCTC 1 cut(s) 1110
StyD4I CCNGG 1 cut(s) 558
StyI CCWWGG 2 cut(s) 1390, 1437
TaaI ACNGT 3 cut(s) 167, 626, 1255
TaqI TCGA 4 cut(s) 126, 410, 1065, 1227
TaqII GACCGA 2 cut(s) 246, 1142
TasI AATT 5 cut(s) 284, 337, 631, 778, 1059
TatI WGTACW 1 cut(s) 626
TauI GCSGC 2 cut(s) 732, 1376
TfiI GAWTC 7 cut(s) 153, 252, 348, 676, 766, 967, 1135
Tru1I TTAA 4 cut(s) 189, 246, 534, 959
Tru9I TTAA 4 cut(s) 189, 246, 534, 959
TscAI CASTG 2 cut(s) 431, 1204
TseFI GTSAC 2 cut(s) 1019, 1195
TseI GCWGC 5 cut(s) 140, 504, 980, 1172, 1376
Tsp45I GTSAC 2 cut(s) 1019, 1195
TspDTI ATGAA 5 cut(s) 458, 611, 888, 1071, 1213
TspGWI ACGGA 4 cut(s) 102, 107, 128, 936
TspRI CASTG 2 cut(s) 431, 1204
Tth111I GACNNNGTC 1 cut(s) 1193
VpaK11BI GGWCC 2 cut(s) 5, 1125
XapI RAATTY 4 cut(s) 337, 631, 778, 1059
XbaI TCTAGA 2 cut(s) 79, 805
XmiI GTMKAC 1 cut(s) 693
XmnI GAANNNNTTC 1 cut(s) 779
XspI CTAG 3 cut(s) 80, 716, 806
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.