Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0007595

Physical Location & Seq

Genomic Coordinates Forward (+)

5555966 .. 5559368

Gene Structure 3403 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom11g07340.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1473 bp

ATGGGGGCTCGTTGCTCCAAGTTTTCCCTCTGTTTCTGGCCGTCCAATATCAAATCCAATCTCGACGACCCTTCAGACCCAGAGAATGGGAACAAAAATGAGAAGGACATGCTGCTCGTGTTCAGCGAGTTCAGCCTGGAGCAACTGAAAGCTGCCACGTCAGGATTCTCGTCGGAGAACGTCGTCTCCGAGCACGGGGAGAAAGCTCCCAATGTGGTATACAAAGGGAAGCTCGAAGACGGCCGGTGGATCGCCGTTAAGCGCTTCAACCGATCAGCTTGGCCTGATTCGCGCCAATTTCTGGAGGAAGCTAGAGCTGTGGGGCAGCTGAGGAACGAGCGGTTGGCGAATTTGTTCGGGTGTTGCTGTGAGGGCGATGAGAGATTGCTTGTGGCTGAGTTCATGCCTAATGAAACTCTCTCTAAGCATCTCTTTCATTGGGAGGCTCAGCCGTTGAAATGGGCAATGAGGTTGCGAGTGGCTTTGTATCTTGCGCAAGCTTTAGAGTATTGCAGCAGTAAAGGGCAGGCATTGTACCATGATCTGAATGCTTATAGAGTCCTCTTTGATCAGGATGCGAATCCTAGACTCTCCTGCTTTGGCCTGATGAAGAATAGCAAAGACGGCAAGAGCTACAGTACAAACCTGGCTTTCACCCCTCCAGAGTACTTGAGGACAGGAAGAGTGATACCAGAAAGTTTAGTTTACAGCTTTGGGACCTTATTGCTTGATCTGCTCAGTGGAAAACATATCCCCCCTAGCCATGCACTTGACCTGATACGGGGCAAAAACTTTTTGATGCTGATGGACTCATGCTTGGAAGGTCATTTCTCAAATGATGATGGAACTGAGCTAGTGAGGTTAGCTTCACGGTGCTTGCAGTATGAACCTCGTGAGAGGCCAAATGCCAAGTCTCTTGTGACTGCTCTCATTCCTCTTCAAAAAGAAACTGAGGTTCCATCATATGTTTTGATGGGTATTCCACACGGAAATGCGCCTCTAAATCAGACATCGTTGTCACCTCTAGGTGAAGCTTGCTCGAGACTGGATCTTACTGCAATACATGAAATATTGGAGAAGCTTGGCTACAAGGATGATGAGGGGGTTGCAAATGAACTTTCTTTCCAAATGTGGACAAATCAAATACAAGAAACGTTGAATTCTAAGAAGCGTGCAGATGCTGCATTTCGAGCCAAAAATTTTGCTACTGCCATAGATTCTTACACAGAATTCATCGATGGTGGCACAATGATATCCCCAACTGTGTTTGCTCGACGTTGCTTATGTTACTTGATGAATGACATGGCACAAGAAGCTCTTGGAGATGCAATGCAGGCCCTAGTAATAAACCCCGAATGGCCAATGGCCTTCTATCTTCAAGCGGCTGCACTAAAGAGCCTAGGGATGGACAATGATGCGCAGGAAACGCTTCAAGACGGATCATCCTTGGAAGCCAAAAGAAACAAAAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009506 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009741 GO:0009742 GO:0009755 GO:0009987 GO:0010033 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0030054 GO:0032870 GO:0033993 GO:0036211 GO:0038023 GO:0042221 GO:0043170 GO:0043401 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048545 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060089 GO:0065007 GO:0070887 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0071944 GO:0097305 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

491

Amino Acids

54.95

Weight (kDa)

5.55

Isoelectric Point (pI)

36.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK_Tyr_Ser-Thr	PF07714	72 - 310	5.4e-26	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	72 - 307	2.6e-21	Protein kinase domain
TPR_BSK1_C	PF25575	344 - 461	1.3e-62	Serine/threonine-protein kinase BSK1-like, TPR repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007595)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G59010 AT5G59010
fragaria_vesca	FvH4_3g37400 FvH4_3g37400 FvH4_3g37400
malus_domestica	MD03G1081000.v1.1
prunus_persica	Prupe.6G065400_v2.0.a1 Prupe.6G065400_v2.0.a1 Prupe.6G065600_v2.0.a1 Prupe.6G065600_v2.0.a1 Prupe.6G065600_v2.0.a1 Prupe.6G065600_v2.0.a1
pyrus_communis	pycom11g07340
rosa_chinensis	RchiOBHm_Chr5g0067251
rosa_laevigata	RLG00000035919
rosa_multiflora	Rmu_sc0000015.1_g000015
rosa_roxburghii	Rroxscaffold_1G00013880
rosa_rugosa	Rorug05G0383200 Rorug05G0383300
rosa_samantha	Rh5AG442800 Rh5BG459900 Rh5CG482300 Rh5DG474800
rosa_wichuraiana	Rw5G041370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1015
Acc16I	TGCGCA	2 cut(s)	495, 1419
AccB7I	CCANNNNNTGG	2 cut(s)	86, 301
AccBSI	CCGCTC	1 cut(s)	340
AccI	GTMKAC	1 cut(s)	219
AccII	CGCG	1 cut(s)	292
AciI	CCGC	2 cut(s)	340, 1382
AclI	AACGTT	1 cut(s)	1154
AclWI	GGATC	3 cut(s)	257, 1056, 1447
AcoI	YGGCCR	3 cut(s)	38, 241, 1358
AcsI	RAATTY	4 cut(s)	349, 1159, 1198, 1229
AcuI	CTGAAG	1 cut(s)	57
AfaI	GTAC	3 cut(s)	536, 640, 668
AfeI	AGCGCT	1 cut(s)	263
AfiI	CCNNNNNNNGG	5 cut(s)	86, 195, 301, 781, 1405
AgsI	TTSAA	6 cut(s)	268, 457, 941, 1159, 1379, 1433
AjiI	CACGTC	1 cut(s)	159
AjnI	CCWGG	2 cut(s)	135, 645
AjuI	GAANNNNNNNTTGG	2 cut(s)	326, 358
AloI	GAACNNNNNNTCC	4 cut(s)	170, 202, 1107, 1139
Alw21I	GWGCWC	1 cut(s)	195
Alw26I	GTCTC	3 cut(s)	190, 918, 1036
AlwI	GGATC	3 cut(s)	257, 1056, 1447
AlwNI	CAGNNNCTG	1 cut(s)	1181
Ama87I	CYCGRG	1 cut(s)	1039
Aor51HI	AGCGCT	1 cut(s)	263
AoxI	GGCC	8 cut(s)	38, 241, 281, 601, 899, 1335, 1358, 1365
ApeKI	GCWGC	6 cut(s)	112, 152, 325, 513, 1181, 1385
ApoI	RAATTY	4 cut(s)	349, 1159, 1198, 1229
ArsI	GACNNNNNNTTYG	2 cut(s)	896, 928
Asp700I	GAANNNNTTC	2 cut(s)	353, 1428
AspA2I	CCTAGG	1 cut(s)	1399
AspLEI	GCGC	5 cut(s)	264, 294, 496, 997, 1420
AspS9I	GGNCC	2 cut(s)	717, 1336
AsuHPI	GGTGA	3 cut(s)	646, 1011, 1040
AvaI	CYCGRG	1 cut(s)	1039
AvaII	GGWCC	1 cut(s)	717
AvrII	CCTAGG	1 cut(s)	1399
BalI	TGGCCA	1 cut(s)	1360
BanII	GRGCYC	1 cut(s)	10
BarI	GAAGNNNNNNTAC	2 cut(s)	1070, 1102
BauI	CACGAG	2 cut(s)	116, 891
BbsI	GAAGAC	1 cut(s)	243
Bbv12I	GWGCWC	1 cut(s)	195
BbvCI	CCTCAGC	1 cut(s)	329
BbvI	GCAGC	6 cut(s)	99, 139, 337, 525, 1168, 1372
BccI	CCATC	6 cut(s)	799, 836, 967, 967, 1232, 1399
BceAI	ACGGC	5 cut(s)	25, 239, 256, 436, 640
BciT130I	CCWGG	2 cut(s)	137, 647
BclI	TGATCA	1 cut(s)	568
BcoDI	GTCTC	3 cut(s)	190, 918, 1036
BfaI	CTAG	7 cut(s)	312, 585, 759, 854, 1025, 1340, 1400
BfmI	CTRYAG	1 cut(s)	634
BfoI	RGCGCY	1 cut(s)	265
BisI	GCNGC	7 cut(s)	113, 153, 326, 514, 1182, 1383, 1386
BlnI	CCTAGG	1 cut(s)	1399
BlpI	GCTNAGC	1 cut(s)	447
BlsI	GCNGC	7 cut(s)	114, 154, 327, 515, 1183, 1384, 1387
BmcAI	AGTACT	1 cut(s)	668
Bme1390I	CCNGG	2 cut(s)	137, 647
Bme18I	GGWCC	1 cut(s)	717
BmeT110I	CYCGRG	1 cut(s)	1039
BmgBI	CACGTC	1 cut(s)	159
BmgT120I	GGNCC	2 cut(s)	717, 1336
BmiI	GGNNCC	2 cut(s)	718, 957
BmrFI	CCNGG	2 cut(s)	137, 647
BmsI	GCATC	6 cut(s)	436, 565, 789, 1168, 1315, 1405
BpiI	GAAGAC	1 cut(s)	243
BpmI	CTGGAG	3 cut(s)	158, 323, 645
Bpu10I	CCTNAGC	1 cut(s)	329
Bpu1102I	GCTNAGC	1 cut(s)	447
BpuEI	CTTGAG	1 cut(s)	691
Bsa29I	ATCGAT	1 cut(s)	1236
BsaBI	GATNNNNATC	1 cut(s)	579
BsaJI	CCNNGG	2 cut(s)	1399, 1446
BsaXI	ACNNNNNCTCC	2 cut(s)	170, 200
Bsc4I	CCNNNNNNNGG	5 cut(s)	86, 195, 301, 781, 1405
Bse118I	RCCGGY	1 cut(s)	243
Bse1I	ACTGG	1 cut(s)	1050
Bse3DI	GCAATG	2 cut(s)	471, 1335
Bse8I	GATNNNNATC	1 cut(s)	579
BseBI	CCWGG	2 cut(s)	137, 647
BseCI	ATCGAT	1 cut(s)	1236
BseDI	CCNNGG	2 cut(s)	1399, 1446
BseGI	GGATG	4 cut(s)	580, 1099, 1410, 1442
BseJI	GATNNNNATC	1 cut(s)	579
BseLI	CCNNNNNNNGG	5 cut(s)	86, 195, 301, 781, 1405
BseMI	GCAATG	2 cut(s)	471, 1335
BseMII	CTCAG	6 cut(s)	320, 387, 461, 751, 840, 942
BseNI	ACTGG	1 cut(s)	1050
BseX3I	CGGCCG	1 cut(s)	241
BseXI	GCAGC	6 cut(s)	99, 139, 337, 525, 1168, 1372
BsgI	GTGCAG	2 cut(s)	1194, 1371
Bsh1236I	CGCG	1 cut(s)	292
Bsh1285I	CGRYCG	1 cut(s)	244
BshFI	GGCC	8 cut(s)	40, 243, 283, 603, 901, 1337, 1360, 1367
BshVI	ATCGAT	1 cut(s)	1236
BsiEI	CGRYCG	1 cut(s)	244
BsiHKAI	GWGCWC	1 cut(s)	195
BsiHKCI	CYCGRG	1 cut(s)	1039
BsiSI	CCGG	1 cut(s)	244
BslFI	GGGAC	1 cut(s)	730
BslI	CCNNNNNNNGG	5 cut(s)	86, 195, 301, 781, 1405
BsmAI	GTCTC	3 cut(s)	190, 918, 1036
BsmBI	CGTCTC	1 cut(s)	190
BsmFI	GGGAC	1 cut(s)	730
BsmI	GAATGC	1 cut(s)	553
BsnI	GGCC	8 cut(s)	40, 243, 283, 603, 901, 1337, 1360, 1367
BsoBI	CYCGRG	1 cut(s)	1039
Bsp1286I	GDGCHC	2 cut(s)	10, 195
Bsp143I	GATC	7 cut(s)	249, 272, 541, 568, 730, 1048, 1439
Bsp1720I	GCTNAGC	1 cut(s)	447
BspACI	CCGC	2 cut(s)	340, 1382
BspANI	GGCC	8 cut(s)	40, 243, 283, 603, 901, 1337, 1360, 1367
BspCNI	CTCAG	6 cut(s)	321, 388, 460, 750, 841, 943
BspDI	ATCGAT	1 cut(s)	1236
BspFNI	CGCG	1 cut(s)	292
BspLI	GGNNCC	2 cut(s)	718, 957
BspPI	GGATC	3 cut(s)	257, 1056, 1447
BsrBI	CCGCTC	1 cut(s)	340
BsrDI	GCAATG	2 cut(s)	471, 1335
BsrFI	RCCGGY	1 cut(s)	243
BsrI	ACTGG	1 cut(s)	1050
BssAI	RCCGGY	1 cut(s)	243
BssECI	CCNNGG	2 cut(s)	1399, 1446
BssMI	GATC	7 cut(s)	249, 272, 541, 568, 730, 1048, 1439
BssNAI	GTATAC	1 cut(s)	220
BssSI	CACGAG	2 cut(s)	116, 891
BssT1I	CCWWGG	2 cut(s)	1399, 1446
Bst1107I	GTATAC	1 cut(s)	220
Bst2BI	CACGAG	2 cut(s)	116, 891
Bst2UI	CCWGG	2 cut(s)	137, 647
Bst4CI	ACNGT	3 cut(s)	638, 873, 1264
Bst6I	CTCTTC	2 cut(s)	676, 942
BstAPI	GCANNNNNTGC	1 cut(s)	1181
BstC8I	GCNNGC	6 cut(s)	498, 528, 878, 1036, 1173, 1335
BstDEI	CTNAG	8 cut(s)	329, 396, 423, 447, 737, 849, 951, 1164
BstF5I	GGATG	4 cut(s)	580, 1099, 1410, 1442
BstFNI	CGCG	1 cut(s)	292
BstH2I	RGCGCY	1 cut(s)	265
BstHHI	GCGC	5 cut(s)	264, 294, 496, 997, 1420
BstKTI	GATC	7 cut(s)	252, 275, 544, 571, 733, 1051, 1442
BstMAI	GTCTC	3 cut(s)	190, 918, 1036
BstMBI	GATC	7 cut(s)	249, 272, 541, 568, 730, 1048, 1439
BstMCI	CGRYCG	1 cut(s)	244
BstNI	CCWGG	2 cut(s)	137, 647
BstNSI	RCATGY	1 cut(s)	112
BstSCI	CCNGG	2 cut(s)	135, 645
BstSFI	CTRYAG	1 cut(s)	634
BstUI	CGCG	1 cut(s)	292
BstV1I	GCAGC	6 cut(s)	99, 139, 337, 525, 1168, 1372
BstV2I	GAAGAC	1 cut(s)	243
BstX2I	RGATCY	1 cut(s)	1048
BstYI	RGATCY	1 cut(s)	1048
BstZ17I	GTATAC	1 cut(s)	220
BstZI	CGGCCG	1 cut(s)	241
Bsu15I	ATCGAT	1 cut(s)	1236
BsuRI	GGCC	8 cut(s)	40, 243, 283, 603, 901, 1337, 1360, 1367
BsuTUI	ATCGAT	1 cut(s)	1236
BtgZI	GCGATG	1 cut(s)	390
BtrI	CACGTC	1 cut(s)	159
BtsCI	GGATG	4 cut(s)	580, 1099, 1410, 1442
BtsIMutI	CAGTG	1 cut(s)	745
Cac8I	GCNNGC	6 cut(s)	498, 528, 878, 1036, 1173, 1335
CaiI	CAGNNNCTG	1 cut(s)	1181
CfoI	GCGC	5 cut(s)	264, 294, 496, 997, 1420
Cfr10I	RCCGGY	1 cut(s)	243
Cfr13I	GGNCC	2 cut(s)	717, 1336
ClaI	ATCGAT	1 cut(s)	1236
Csp6I	GTAC	3 cut(s)	535, 639, 667
CviAII	CATG	7 cut(s)	109, 403, 539, 764, 813, 1064, 1303
CviQI	GTAC	3 cut(s)	535, 639, 667
DdeI	CTNAG	8 cut(s)	329, 396, 423, 447, 737, 849, 951, 1164
DpnI	GATC	7 cut(s)	251, 274, 543, 570, 732, 1050, 1441
DpnII	GATC	7 cut(s)	249, 272, 541, 568, 730, 1048, 1439
DrdI	GACNNNNNNGTC	1 cut(s)	1015
DseDI	GACNNNNNNGTC	1 cut(s)	1015
EaeI	YGGCCR	3 cut(s)	38, 241, 1358
EagI	CGGCCG	1 cut(s)	241
Eam1104I	CTCTTC	2 cut(s)	676, 942
EarI	CTCTTC	2 cut(s)	676, 942
EclXI	CGGCCG	1 cut(s)	241
Eco130I	CCWWGG	2 cut(s)	1399, 1446
Eco24I	GRGCYC	1 cut(s)	10
Eco32I	GATATC	1 cut(s)	1254
Eco47I	GGWCC	1 cut(s)	717
Eco47III	AGCGCT	1 cut(s)	263
Eco52I	CGGCCG	1 cut(s)	241
Eco57I	CTGAAG	1 cut(s)	57
Eco88I	CYCGRG	1 cut(s)	1039
EcoO109I	RGGNCCY	2 cut(s)	717, 1336
EcoRI	GAATTC	2 cut(s)	1159, 1229
EcoRII	CCWGG	2 cut(s)	135, 645
EcoRV	GATATC	1 cut(s)	1254
EcoT14I	CCWWGG	2 cut(s)	1399, 1446
EcoT38I	GRGCYC	1 cut(s)	10
ErhI	CCWWGG	2 cut(s)	1399, 1446
Esp3I	CGTCTC	1 cut(s)	190
FaeI	CATG	7 cut(s)	112, 406, 542, 767, 816, 1067, 1306
FalI	AAGNNNNNCTT	4 cut(s)	416, 448, 1302, 1334
FaqI	GGGAC	1 cut(s)	730
FatI	CATG	7 cut(s)	108, 402, 538, 763, 812, 1063, 1302
FauNDI	CATATG	1 cut(s)	964
FbaI	TGATCA	1 cut(s)	568
FblI	GTMKAC	1 cut(s)	219
Fnu4HI	GCNGC	7 cut(s)	113, 153, 326, 514, 1182, 1383, 1386
FokI	GGATG	4 cut(s)	587, 1106, 1417, 1429
FriOI	GRGCYC	1 cut(s)	10
Fsp4HI	GCNGC	7 cut(s)	113, 153, 326, 514, 1182, 1383, 1386
FspBI	CTAG	7 cut(s)	312, 585, 759, 854, 1025, 1340, 1400
FspI	TGCGCA	2 cut(s)	495, 1419
GlaI	GCGC	5 cut(s)	263, 293, 495, 996, 1419
GluI	GCNGC	7 cut(s)	113, 153, 326, 514, 1182, 1383, 1386
GsuI	CTGGAG	3 cut(s)	158, 323, 645
HaeII	RGCGCY	1 cut(s)	265
HaeIII	GGCC	8 cut(s)	40, 243, 283, 603, 901, 1337, 1360, 1367
HapII	CCGG	1 cut(s)	244
HhaI	GCGC	5 cut(s)	264, 294, 496, 997, 1420
Hin1II	CATG	7 cut(s)	112, 406, 542, 767, 816, 1067, 1306
Hin6I	GCGC	5 cut(s)	262, 292, 494, 995, 1418
HinP1I	GCGC	5 cut(s)	262, 292, 494, 995, 1418
HindIII	AAGCTT	3 cut(s)	498, 1032, 1079
HinfI	GANTC	7 cut(s)	165, 287, 558, 580, 588, 809, 1217
HpaII	CCGG	1 cut(s)	244
HphI	GGTGA	3 cut(s)	646, 1011, 1040
Hpy166II	GTNNAC	3 cut(s)	220, 706, 1134
Hpy188I	TCNGA	5 cut(s)	76, 175, 190, 546, 1008
Hpy188III	TCNNGA	8 cut(s)	62, 162, 302, 572, 662, 893, 1041, 1433
Hpy8I	GTNNAC	3 cut(s)	220, 706, 1134
Hpy99I	CGWCG	4 cut(s)	68, 175, 185, 1278
HpyAV	CCTTC	4 cut(s)	81, 97, 815, 1378
HpyCH4III	ACNGT	3 cut(s)	638, 873, 1264
HpyCH4IV	ACGT	4 cut(s)	158, 180, 1154, 1276
HpyF3I	CTNAG	8 cut(s)	329, 396, 423, 447, 737, 849, 951, 1164
HpySE526I	ACGT	4 cut(s)	158, 180, 1154, 1276
Hsp92II	CATG	7 cut(s)	112, 406, 542, 767, 816, 1067, 1306
HspAI	GCGC	5 cut(s)	262, 292, 494, 995, 1418
Ksp22I	TGATCA	1 cut(s)	568
Kzo9I	GATC	7 cut(s)	249, 272, 541, 568, 730, 1048, 1439
LmnI	GCTCC	3 cut(s)	20, 139, 211
Lsp1109I	GCAGC	6 cut(s)	99, 139, 337, 525, 1168, 1372
LweI	GCATC	6 cut(s)	436, 565, 789, 1168, 1315, 1405
MaeI	CTAG	7 cut(s)	312, 585, 759, 854, 1025, 1340, 1400
MaeII	ACGT	4 cut(s)	158, 180, 1154, 1276
MaeIII	GTNAC	3 cut(s)	919, 1017, 1286
MalI	GATC	7 cut(s)	251, 274, 543, 570, 732, 1050, 1441
MbiI	CCGCTC	1 cut(s)	340
MboI	GATC	7 cut(s)	249, 272, 541, 568, 730, 1048, 1439
MboII	GAAGA	5 cut(s)	248, 622, 693, 929, 1367
MflI	RGATCY	1 cut(s)	1048
MhlI	GDGCHC	2 cut(s)	10, 195
MlsI	TGGCCA	1 cut(s)	1360
MluCI	AATT	5 cut(s)	296, 349, 1159, 1198, 1229
MluNI	TGGCCA	1 cut(s)	1360
MlyI	GAGTC	3 cut(s)	567, 582, 803
MmeI	TCCRAC	1 cut(s)	153
Mox20I	TGGCCA	1 cut(s)	1360
MroXI	GAANNNNTTC	2 cut(s)	353, 1428
MscI	TGGCCA	1 cut(s)	1360
MseI	TTAA	1 cut(s)	258
MslI	CAYNNNNRTG	1 cut(s)	990
Msp20I	TGGCCA	1 cut(s)	1360
MspA1I	CMGCKG	1 cut(s)	328
MspI	CCGG	1 cut(s)	244
MspR9I	CCNGG	2 cut(s)	137, 647
Mva1269I	GAATGC	1 cut(s)	553
MvaI	CCWGG	2 cut(s)	137, 647
MvnI	CGCG	1 cut(s)	292
NdeI	CATATG	1 cut(s)	964
NdeII	GATC	7 cut(s)	249, 272, 541, 568, 730, 1048, 1439
NlaIII	CATG	7 cut(s)	112, 406, 542, 767, 816, 1067, 1306
NlaIV	GGNNCC	2 cut(s)	718, 957
NmuCI	GTSAC	2 cut(s)	919, 1017
NsbI	TGCGCA	2 cut(s)	495, 1419
NspI	RCATGY	1 cut(s)	112
PaeR7I	CTCGAG	1 cut(s)	1039
PcsI	WCGNNNNNNNCGW	2 cut(s)	123, 186
PctI	GAATGC	1 cut(s)	553
PdmI	GAANNNNTTC	2 cut(s)	353, 1428
PfeI	GAWTC	4 cut(s)	165, 287, 580, 1217
PflMI	CCANNNNNTGG	2 cut(s)	86, 301
PkrI	GCNGC	7 cut(s)	114, 154, 327, 515, 1183, 1384, 1387
PleI	GAGTC	3 cut(s)	566, 582, 803
PpsI	GAGTC	3 cut(s)	566, 582, 803
PpuMI	RGGWCCY	1 cut(s)	717
Psp1406I	AACGTT	1 cut(s)	1154
Psp5II	RGGWCCY	1 cut(s)	717
Psp6I	CCWGG	2 cut(s)	135, 645
PspGI	CCWGG	2 cut(s)	135, 645
PspN4I	GGNNCC	2 cut(s)	718, 957
PspPI	GGNCC	2 cut(s)	717, 1336
PspPPI	RGGWCCY	1 cut(s)	717
PstNI	CAGNNNCTG	1 cut(s)	1181
PsuI	RGATCY	1 cut(s)	1048
PvuII	CAGCTG	1 cut(s)	328
RsaI	GTAC	3 cut(s)	536, 640, 668
RsaNI	GTAC	3 cut(s)	535, 639, 667
RseI	CAYNNNNRTG	1 cut(s)	990
SaqAI	TTAA	1 cut(s)	258
SatI	GCNGC	7 cut(s)	113, 153, 326, 514, 1182, 1383, 1386
Sau3AI	GATC	7 cut(s)	249, 272, 541, 568, 730, 1048, 1439
Sau96I	GGNCC	2 cut(s)	717, 1336
ScaI	AGTACT	1 cut(s)	668
SchI	GAGTC	3 cut(s)	567, 582, 803
ScrFI	CCNGG	2 cut(s)	137, 647
SduI	GDGCHC	2 cut(s)	10, 195
SfaNI	GCATC	6 cut(s)	436, 565, 789, 1168, 1315, 1405
SfcI	CTRYAG	1 cut(s)	634
Sfr274I	CTCGAG	1 cut(s)	1039
SinI	GGWCC	1 cut(s)	717
SlaI	CTCGAG	1 cut(s)	1039
SmiMI	CAYNNNNRTG	1 cut(s)	990
SmlI	CTYRAG	2 cut(s)	670, 1039
SmoI	CTYRAG	2 cut(s)	670, 1039
Sse9I	AATT	5 cut(s)	296, 349, 1159, 1198, 1229
SsiI	CCGC	2 cut(s)	340, 1382
SspI	AATATT	1 cut(s)	1071
SspMI	CTAG	7 cut(s)	312, 585, 759, 854, 1025, 1340, 1400
StyD4I	CCNGG	2 cut(s)	135, 645
StyI	CCWWGG	2 cut(s)	1399, 1446
TaaI	ACNGT	3 cut(s)	638, 873, 1264
TaiI	ACGT	4 cut(s)	161, 183, 1157, 1279
TaqI	TCGA	6 cut(s)	63, 234, 1040, 1189, 1236, 1273
TasI	AATT	5 cut(s)	296, 349, 1159, 1198, 1229
TatI	WGTACW	2 cut(s)	638, 666
TauI	GCSGC	1 cut(s)	1385
TfiI	GAWTC	4 cut(s)	165, 287, 580, 1217
Tru1I	TTAA	1 cut(s)	258
Tru9I	TTAA	1 cut(s)	258
TscAI	CASTG	1 cut(s)	745
TseFI	GTSAC	2 cut(s)	919, 1017
TseI	GCWGC	6 cut(s)	112, 152, 325, 513, 1181, 1385
Tsp45I	GTSAC	2 cut(s)	919, 1017
TspDTI	ATGAA	9 cut(s)	391, 425, 426, 623, 900, 1080, 1128, 1222, 1310
TspGWI	ACGGA	2 cut(s)	1002, 1452
TspRI	CASTG	1 cut(s)	745
Van91I	CCANNNNNTGG	2 cut(s)	86, 301
VpaK11BI	GGWCC	1 cut(s)	717
XapI	RAATTY	4 cut(s)	349, 1159, 1198, 1229
XceI	RCATGY	1 cut(s)	112
XhoI	CTCGAG	1 cut(s)	1039
XmaJI	CCTAGG	1 cut(s)	1399
XmiI	GTMKAC	1 cut(s)	219
XmnI	GAANNNNTTC	2 cut(s)	353, 1428
XspI	CTAG	7 cut(s)	312, 585, 759, 854, 1025, 1340, 1400
ZrmI	AGTACT	1 cut(s)	668

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.