AT5G64290

Dicarboxylate transporter 2.1

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
25714178 .. 25716901
2724 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G64290.1

Sequence Viewer

Length: 1692 bp
ATGGAGAGTTTCGCTCTTCACTCTCTCTCCACCACCGCCACTTCCACCTTACTCTCCCATCATCATCATCACCATCCCTCACGTCTCTCTCTTCTCCGTCGTACCTCTTCGAGATCTCCGCCTTCAACAATCTCCCTCCGATCTCTCTCCGTTCAACCTCTCTCCTTCCCTCTTCTCAAACCAATTCCTCGATTCTCCACACGAATCGCCGCCGCACCGCAAGACAACGCTCCTCCTCCTCCTCCCCCATCTCCGTCTCCGTCTCCGTCTCCTCAAGGAGCGAAACTCATCCCTCTGATTCTCTCAATCTCCGTCGGCCTAATCCTCCGATTCGCTGTTCCTGTACCAGAAGGAGTCACACCACAAGGCTGGCAATTACTCTCAATCTTCCTCTCAACAATCGCTGGTCTCGTCCTTAGTCCTCTCCCAGTCGGAGCTTGGGCTTTCATTGGTCTCACCGCTTCAATCGTCACCAAAACGCTTTCTTTCTCCGCCGCTTTCTCAGCTTTCACAAGCGAGGTTATCTGGTTGATCGTTATCTCTTTCTTCTTCGCTCGTGGATTCGTCAAAACAGGTCTTGGTGATAGAATCGCTACTTACTTTGTCAAATGGCTTGGGAAGAGTACTTTAGGTCTATCTTATGGTCTCACGCTTAGTGAGGCTTTAATTGCTCCTGCGATGCCTAGTACTACTGCTAGAGCTGGTGGCATTTTCTTGCCCATCATCAAGTCTCTATCGCTCTCGGCTGGAAGTAAACCGAATGATTCTTCTTCGAGGAAACTAGGCTCTTACTTGATTCAATCTCAATTCCAGTGCGCCGGAAACTCTAGTGCGCTTTTCTTGACTGCTGCAGCTCAAAATTTGCTGTGTCTCAAGTTAGCAGAGGAGCTTGGAGTAGTGATCTCAAACCCGTGGGTTTCTTGGTTTAAGGCTGCTAGTCTACCTGCAATCATATCACTTCTTTGTACTCCACTTATCCTCTATAAGCTTTATCCTCCAGAAACAAAGGACACACCTGAGGCTCCAGGTATTGCTGCAACGAAACTCAAGCAAATGGGCCCTGTCACTAAAAACGAATGGATCATGGTCGGTACAATGCTTCTTGCTGTCACTCTTTGGATCTGCGGAGAGACTCTGGGAATACCAAGTGTTGTAGCTGCCATGATCGGTCTCTCCATACTTCTTGTGCTAGGTGTCCTTAATTGGGACGATTGCCTAAGCGAAAAATCGGCATGGGACACATTAGCTTGGTTTGCTGTCTTGGTGGGAATGGCAGGACAGCTTACAAACCTCGGTGTTGTAACGTGGATGTCTGATTGTGTAGCTAAAGTTCTACAATCTCTCTCCTTGAGTTGGCCTGCTGCGTTTGGACTTCTTCAAGCAGCCTACTTCTTCATTCACTACCTTTTCGCAAGCCAAACCGGTCATGTTGGAGCTCTCTTCTCAGCTTTCCTTGCTATGCATATAGCAGCAGGTGTTCCAGGAATTCTAGCTGCACTTGCTTTAGCATACAACACCAATCTTTTTGGTGCTTTGACTCATTACAGTAGCGGTCAAGCCGCTGTCTACTATGGAGCGGGTTATGTTGATCTGCCTGATGTATTCAAGATTGGATTCGTGATGGCGACGATTAATGCGATAATCTGGGGAGTAGTTGGGACTTTCTGGTGGAAATTTTTGGGTCTCTACTAA

Protein Analysis

563

Amino Acids

59.99

Weight (kDa)

9.34

Isoelectric Point (pI)

40.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Na_sulph_symp PF00939 95 - 562 7.3e-135 Sodium:sulfate symporter transmembrane region
CitMHS PF03600 137 - 503 3e-16 Citrate transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0011261)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1463
Acc36I ACCTGC 2 cut(s) 952, 1463
AccBSI CCGCTC 1 cut(s) 1577
AccI GTMKAC 2 cut(s) 940, 1566
AclWI GGATC 2 cut(s) 1088, 1127
AcsI RAATTY 3 cut(s) 859, 1485, 1673
AfaI GTAC 6 cut(s) 103, 345, 625, 688, 967, 1093
AfiI CCNNNNNNNGG 2 cut(s) 1204, 1353
AgeI ACCGGT 1 cut(s) 1421
AgsI TTSAA 6 cut(s) 126, 155, 465, 800, 1379, 1606
AjiI CACGTC 1 cut(s) 83
AjnI CCWGG 2 cut(s) 1024, 1480
Alw21I GWGCWC 1 cut(s) 1438
AlwI GGATC 2 cut(s) 1088, 1127
AoxI GGCC 3 cut(s) 316, 1057, 1355
ApaI GGGCCC 1 cut(s) 1061
ApeKI GCWGC 9 cut(s) 848, 851, 932, 1034, 1157, 1361, 1382, 1469, 1493
ApoI RAATTY 3 cut(s) 859, 1485, 1673
AseI ATTAAT 1 cut(s) 1632
AsiGI ACCGGT 1 cut(s) 1421
AspLEI GCGC 2 cut(s) 818, 835
AspS9I GGNCC 2 cut(s) 1057, 1058
AsuHPI GGTGA 4 cut(s) 62, 448, 463, 593
AxyI CCTNAGG 1 cut(s) 1017
BaeGI GKGCMC 1 cut(s) 1061
BanII GRGCYC 2 cut(s) 1061, 1438
BauI CACGAG 1 cut(s) 555
Bbv12I GWGCWC 1 cut(s) 1438
BbvI GCAGC 9 cut(s) 835, 863, 919, 1021, 1144, 1348, 1394, 1480, 1481
BccI CCATC 5 cut(s) 66, 81, 256, 728, 1615
BciT130I CCWGG 2 cut(s) 1026, 1482
BfaI CTAG 7 cut(s) 684, 696, 782, 828, 936, 1190, 1490
BfmI CTRYAG 1 cut(s) 849
BfuAI ACCTGC 2 cut(s) 952, 1463
BglII AGATCT 1 cut(s) 113
BmcAI AGTACT 2 cut(s) 625, 688
Bme1390I CCNGG 2 cut(s) 1026, 1482
BmgBI CACGTC 1 cut(s) 83
BmgT120I GGNCC 2 cut(s) 1057, 1058
BmiI GGNNCC 2 cut(s) 1023, 1059
BmrFI CCNGG 2 cut(s) 1026, 1482
BmrI ACTGGG 1 cut(s) 422
BmsI GCATC 1 cut(s) 669
BmuI ACTGGG 1 cut(s) 422
BplI GAGNNNNNCTC 3 cut(s) 30, 270, 302
BpmI CTGGAG 2 cut(s) 981, 1008
Bpu10I CCTNAGC 1 cut(s) 1217
BpuEI CTTGAG 4 cut(s) 258, 857, 1031, 1369
BsaBI GATNNNNATC 1 cut(s) 536
BsaI GGTCTC 5 cut(s) 413, 458, 650, 1175, 1688
BsaJI CCNNGG 2 cut(s) 911, 1291
BsaWI WCCGGW 1 cut(s) 1421
BsaXI ACNNNNNCTCC 2 cut(s) 11, 41
Bsc4I CCNNNNNNNGG 2 cut(s) 1204, 1353
Bse118I RCCGGY 1 cut(s) 1421
Bse1I ACTGG 2 cut(s) 428, 811
Bse21I CCTNAGG 1 cut(s) 1017
Bse8I GATNNNNATC 1 cut(s) 536
BseBI CCWGG 2 cut(s) 1026, 1482
BseDI CCNNGG 2 cut(s) 911, 1291
BseGI GGATG 3 cut(s) 73, 288, 1314
BseJI GATNNNNATC 1 cut(s) 536
BseLI CCNNNNNNNGG 2 cut(s) 1204, 1353
BseMII CTCAG 3 cut(s) 516, 1008, 1458
BseNI ACTGG 2 cut(s) 428, 811
BseRI GAGGAG 6 cut(s) 222, 225, 228, 231, 261, 899
BseSI GKGCMC 1 cut(s) 1061
BseXI GCAGC 9 cut(s) 835, 863, 919, 1021, 1144, 1348, 1394, 1480, 1481
BsgI GTGCAG 1 cut(s) 1479
BshFI GGCC 3 cut(s) 318, 1059, 1357
BshTI ACCGGT 1 cut(s) 1421
BsiHKAI GWGCWC 1 cut(s) 1438
BsiSI CCGG 2 cut(s) 819, 1422
BslFI GGGAC 3 cut(s) 1220, 1250, 1672
BslI CCNNNNNNNGG 2 cut(s) 1204, 1353
BsmBI CGTCTC 4 cut(s) 89, 261, 267, 273
BsmFI GGGAC 3 cut(s) 1220, 1250, 1672
BsnI GGCC 3 cut(s) 318, 1059, 1357
Bso31I GGTCTC 5 cut(s) 413, 458, 650, 1175, 1688
Bsp120I GGGCCC 1 cut(s) 1057
Bsp1286I GDGCHC 2 cut(s) 1061, 1438
Bsp143I GATC 8 cut(s) 113, 140, 531, 900, 1080, 1119, 1164, 1588
BspANI GGCC 3 cut(s) 318, 1059, 1357
BspCNI CTCAG 3 cut(s) 515, 1009, 1457
BspLI GGNNCC 2 cut(s) 1023, 1059
BspMAI CTGCAG 1 cut(s) 853
BspMI ACCTGC 2 cut(s) 952, 1463
BspPI GGATC 2 cut(s) 1088, 1127
BspQI GCTCTTC 1 cut(s) 21
BspTNI GGTCTC 5 cut(s) 413, 458, 650, 1175, 1688
BsrBI CCGCTC 1 cut(s) 1577
BsrFI RCCGGY 1 cut(s) 1421
BsrI ACTGG 2 cut(s) 428, 811
BssAI RCCGGY 1 cut(s) 1421
BssECI CCNNGG 2 cut(s) 911, 1291
BssMI GATC 8 cut(s) 113, 140, 531, 900, 1080, 1119, 1164, 1588
BssSI CACGAG 1 cut(s) 555
Bst2BI CACGAG 1 cut(s) 555
Bst2UI CCWGG 2 cut(s) 1026, 1482
Bst4CI ACNGT 1 cut(s) 1547
Bst6I CTCTTC 6 cut(s) 21, 96, 112, 177, 614, 1445
BstC8I GCNNGC 3 cut(s) 371, 1359, 1414
BstDEI CTNAG 6 cut(s) 416, 502, 653, 1017, 1217, 1444
BstDSI CCRYGG 1 cut(s) 911
BstF5I GGATG 3 cut(s) 73, 288, 1314
BstHHI GCGC 2 cut(s) 818, 835
BstKTI GATC 8 cut(s) 116, 143, 534, 903, 1083, 1122, 1167, 1591
BstMBI GATC 8 cut(s) 113, 140, 531, 900, 1080, 1119, 1164, 1588
BstMWI GCNNNNNNNGC 5 cut(s) 503, 668, 1253, 1454, 1499
BstNI CCWGG 2 cut(s) 1026, 1482
BstSCI CCNGG 2 cut(s) 1024, 1480
BstSFI CTRYAG 1 cut(s) 849
BstSLI GKGCMC 1 cut(s) 1061
BstV1I GCAGC 9 cut(s) 835, 863, 919, 1021, 1144, 1348, 1394, 1480, 1481
BstX2I RGATCY 2 cut(s) 113, 1119
BstXI CCANNNNNNTGG 1 cut(s) 369
BstYI RGATCY 2 cut(s) 113, 1119
Bsu36I CCTNAGG 1 cut(s) 1017
BsuRI GGCC 3 cut(s) 318, 1059, 1357
BtgI CCRYGG 1 cut(s) 911
BtgZI GCGATG 1 cut(s) 692
BtrI CACGTC 1 cut(s) 83
BtsCI GGATG 3 cut(s) 73, 288, 1314
BtsIMutI CAGTG 1 cut(s) 818
BveI ACCTGC 2 cut(s) 952, 1463
Cac8I GCNNGC 3 cut(s) 371, 1359, 1414
CfoI GCGC 2 cut(s) 818, 835
Cfr10I RCCGGY 1 cut(s) 1421
Cfr13I GGNCC 2 cut(s) 1057, 1058
Csp6I GTAC 6 cut(s) 102, 344, 624, 687, 966, 1092
CspAI ACCGGT 1 cut(s) 1421
CviAII CATG 4 cut(s) 1084, 1162, 1233, 1427
CviQI GTAC 6 cut(s) 102, 344, 624, 687, 966, 1092
DdeI CTNAG 6 cut(s) 416, 502, 653, 1017, 1217, 1444
DpnI GATC 8 cut(s) 115, 142, 533, 902, 1082, 1121, 1166, 1590
DpnII GATC 8 cut(s) 113, 140, 531, 900, 1080, 1119, 1164, 1588
Eam1104I CTCTTC 6 cut(s) 21, 96, 112, 177, 614, 1445
EarI CTCTTC 6 cut(s) 21, 96, 112, 177, 614, 1445
EciI GGCGGA 2 cut(s) 108, 481
Ecl136II GAGCTC 1 cut(s) 1436
Eco24I GRGCYC 2 cut(s) 1061, 1438
Eco31I GGTCTC 5 cut(s) 413, 458, 650, 1175, 1688
Eco53kI GAGCTC 1 cut(s) 1436
Eco81I CCTNAGG 1 cut(s) 1017
EcoICRI GAGCTC 1 cut(s) 1436
EcoO109I RGGNCCY 1 cut(s) 1058
EcoRI GAATTC 1 cut(s) 1485
EcoRII CCWGG 2 cut(s) 1024, 1480
EcoT22I ATGCAT 1 cut(s) 1464
EcoT38I GRGCYC 2 cut(s) 1061, 1438
Esp3I CGTCTC 4 cut(s) 89, 261, 267, 273
FaeI CATG 4 cut(s) 1087, 1165, 1236, 1430
FaqI GGGAC 3 cut(s) 1220, 1250, 1672
FatI CATG 4 cut(s) 1083, 1161, 1232, 1426
FauI CCCGC 1 cut(s) 1570
FblI GTMKAC 2 cut(s) 940, 1566
FokI GGATG 3 cut(s) 60, 275, 1321
FriOI GRGCYC 2 cut(s) 1061, 1438
FspBI CTAG 7 cut(s) 684, 696, 782, 828, 936, 1190, 1490
GlaI GCGC 2 cut(s) 817, 834
GsuI CTGGAG 2 cut(s) 981, 1008
HaeIII GGCC 3 cut(s) 318, 1059, 1357
HapII CCGG 2 cut(s) 819, 1422
HhaI GCGC 2 cut(s) 818, 835
Hin1II CATG 4 cut(s) 1087, 1165, 1236, 1430
Hin6I GCGC 2 cut(s) 816, 833
HinP1I GCGC 2 cut(s) 816, 833
HindIII AAGCTT 1 cut(s) 986
HpaII CCGG 2 cut(s) 819, 1422
HphI GGTGA 4 cut(s) 62, 448, 463, 593
Hpy166II GTNNAC 3 cut(s) 755, 941, 1567
Hpy188I TCNGA 5 cut(s) 140, 297, 329, 434, 1315
Hpy188III TCNNGA 5 cut(s) 111, 841, 998, 1606, 1618
Hpy8I GTNNAC 3 cut(s) 755, 941, 1567
Hpy99I CGWCG 3 cut(s) 102, 317, 1630
HpyAV CCTTC 3 cut(s) 132, 175, 344
HpyCH4III ACNGT 1 cut(s) 1547
HpyCH4IV ACGT 2 cut(s) 82, 1304
HpyCH4V TGCA 5 cut(s) 851, 947, 1037, 1462, 1496
HpyF10VI GCNNNNNNNGC 5 cut(s) 503, 668, 1253, 1454, 1499
HpyF3I CTNAG 6 cut(s) 416, 502, 653, 1017, 1217, 1444
HpySE526I ACGT 2 cut(s) 82, 1304
Hsp92II CATG 4 cut(s) 1087, 1165, 1236, 1430
HspAI GCGC 2 cut(s) 816, 833
Kzo9I GATC 8 cut(s) 113, 140, 531, 900, 1080, 1119, 1164, 1588
LguI GCTCTTC 1 cut(s) 21
LmnI GCTCC 8 cut(s) 235, 278, 434, 676, 886, 1027, 1433, 1574
Lsp1109I GCAGC 9 cut(s) 835, 863, 919, 1021, 1144, 1348, 1394, 1480, 1481
LweI GCATC 1 cut(s) 669
MaeI CTAG 7 cut(s) 684, 696, 782, 828, 936, 1190, 1490
MaeII ACGT 2 cut(s) 82, 1304
MaeIII GTNAC 5 cut(s) 355, 469, 1063, 1108, 1300
MalI GATC 8 cut(s) 115, 142, 533, 902, 1082, 1121, 1166, 1590
MbiI CCGCTC 1 cut(s) 1577
MboI GATC 8 cut(s) 113, 140, 531, 900, 1080, 1119, 1164, 1588
MflI RGATCY 2 cut(s) 113, 1119
MhlI GDGCHC 2 cut(s) 1061, 1438
MluCI AATT 8 cut(s) 183, 374, 666, 806, 859, 1201, 1485, 1673
MlyI GAGTC 3 cut(s) 363, 1126, 1531
MmeI TCCRAC 2 cut(s) 412, 1411
Mph1103I ATGCAT 1 cut(s) 1464
MseI TTAA 4 cut(s) 665, 927, 1200, 1632
MspA1I CMGCKG 1 cut(s) 1562
MspI CCGG 2 cut(s) 819, 1422
MspR9I CCNGG 2 cut(s) 1026, 1482
MvaI CCWGG 2 cut(s) 1026, 1482
MwoI GCNNNNNNNGC 5 cut(s) 503, 668, 1253, 1454, 1499
NdeII GATC 8 cut(s) 113, 140, 531, 900, 1080, 1119, 1164, 1588
NlaIII CATG 4 cut(s) 1087, 1165, 1236, 1430
NlaIV GGNNCC 2 cut(s) 1023, 1059
NmeAIII GCCGAG 1 cut(s) 722
NmuCI GTSAC 4 cut(s) 355, 469, 1063, 1108
NsiI ATGCAT 1 cut(s) 1464
PaqCI CACCTGC 1 cut(s) 1463
PciSI GCTCTTC 1 cut(s) 21
PcsI WCGNNNNNNNCGW 2 cut(s) 408, 1634
PfeI GAWTC 9 cut(s) 192, 204, 298, 330, 561, 588, 764, 796, 1614
PfoI TCCNGGA 1 cut(s) 1480
PinAI ACCGGT 1 cut(s) 1421
PleI GAGTC 3 cut(s) 362, 1126, 1531
PpsI GAGTC 3 cut(s) 362, 1126, 1531
PshBI ATTAAT 1 cut(s) 1632
Psp124BI GAGCTC 1 cut(s) 1438
Psp6I CCWGG 2 cut(s) 1024, 1480
PspGI CCWGG 2 cut(s) 1024, 1480
PspN4I GGNNCC 2 cut(s) 1023, 1059
PspOMI GGGCCC 1 cut(s) 1057
PspPI GGNCC 2 cut(s) 1057, 1058
PsrI GAACNNNNNNTAC 2 cut(s) 1314, 1346
PstI CTGCAG 1 cut(s) 853
PsuI RGATCY 2 cut(s) 113, 1119
RsaI GTAC 6 cut(s) 103, 345, 625, 688, 967, 1093
RsaNI GTAC 6 cut(s) 102, 344, 624, 687, 966, 1092
SacI GAGCTC 1 cut(s) 1438
SapI GCTCTTC 1 cut(s) 21
SaqAI TTAA 4 cut(s) 665, 927, 1200, 1632
Sau3AI GATC 8 cut(s) 113, 140, 531, 900, 1080, 1119, 1164, 1588
Sau96I GGNCC 2 cut(s) 1057, 1058
ScaI AGTACT 2 cut(s) 625, 688
SchI GAGTC 3 cut(s) 363, 1126, 1531
ScrFI CCNGG 2 cut(s) 1026, 1482
SduI GDGCHC 2 cut(s) 1061, 1438
SfaNI GCATC 1 cut(s) 669
SfcI CTRYAG 1 cut(s) 849
SmlI CTYRAG 4 cut(s) 273, 872, 1046, 1348
SmoI CTYRAG 4 cut(s) 273, 872, 1046, 1348
Sse9I AATT 8 cut(s) 183, 374, 666, 806, 859, 1201, 1485, 1673
SspMI CTAG 7 cut(s) 684, 696, 782, 828, 936, 1190, 1490
SstI GAGCTC 1 cut(s) 1438
StyD4I CCNGG 2 cut(s) 1024, 1480
TaaI ACNGT 1 cut(s) 1547
TaiI ACGT 2 cut(s) 85, 1307
TaqI TCGA 3 cut(s) 110, 190, 773
TaqII GACCGA 1 cut(s) 1157
TasI AATT 8 cut(s) 183, 374, 666, 806, 859, 1201, 1485, 1673
TatI WGTACW 3 cut(s) 623, 686, 965
TauI GCSGC 4 cut(s) 212, 215, 497, 1562
TfiI GAWTC 9 cut(s) 192, 204, 298, 330, 561, 588, 764, 796, 1614
Tru1I TTAA 4 cut(s) 665, 927, 1200, 1632
Tru9I TTAA 4 cut(s) 665, 927, 1200, 1632
TscAI CASTG 1 cut(s) 818
TseFI GTSAC 4 cut(s) 355, 469, 1063, 1108
TseI GCWGC 9 cut(s) 848, 851, 932, 1034, 1157, 1361, 1382, 1469, 1493
Tsp45I GTSAC 4 cut(s) 355, 469, 1063, 1108
TspDTI ATGAA 2 cut(s) 436, 1384
TspGWI ACGGA 6 cut(s) 86, 139, 243, 249, 255, 301
TspRI CASTG 1 cut(s) 818
VspI ATTAAT 1 cut(s) 1632
XapI RAATTY 3 cut(s) 859, 1485, 1673
XcmI CCANNNNNNNNNTGG 1 cut(s) 435
XmiI GTMKAC 2 cut(s) 940, 1566
XspI CTAG 7 cut(s) 684, 696, 782, 828, 936, 1190, 1490
ZrmI AGTACT 2 cut(s) 625, 688
Zsp2I ATGCAT 1 cut(s) 1464
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.