Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0011261

Physical Location & Seq

Genomic Coordinates Reverse (-)

30050400 .. 30054524

Gene Structure 4125 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G015590.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1698 bp

ATGGAGAGCTTCGCCCTCCACTCTCTCTCCACCTCGTCCTTGTCCCTCTCTACCCGCGCTTCCTTAGTCCGCCGCCGCTCAAAACCGATCCTCAGATCCCCGCCGTCCATCTCTCGTAACAACCCCCTAGCATCTCACTCCCTCCGATCACCCATTCTCTTTGCCTCAAACCCCGTCACATCCTTCTCTCCTTTACCAAATAACAAGACCCATTTCCCAATTCAAGCCTCCCAATCTCCTCAATCCCAAACCAGCCTCACACCGCCACCGCCTCCGCCTCAAGGCGCCAAAATCGTCCCCTTCATCGTCTCCATCGCCATAGGCCTTGTTGTCCGCTTCTTGGTCCCCAAACCCGTCGAAGTGACCCCACAAGCCTGGCAATTGCTCTCCATCTTCCTCTCCACCATCGCCGGCCTGGTTCTCAGCCCGCTACCCGTCGGCGCTTGGGCTTTTCTGGGCCTCACAACCTCCGTAGTCTCCGGAACTCTGACATTTCCGGCGGCCTTCAGTGCTTTTACTAACGAAGTAATATGGTTGATTGTGATTTCCTTCTTTTTCGCTCGTGGATTCGTCAAGACGGGTTTGGGTGATCGCATTGCGACCTACTTTGTCAAGTGGTTGGGGAAGAGCACTCTGGGGTTGTCTTATGGGTTGACCATTAGCGAGGCCCTTATTGCCCCGGCAATGCCCAGTACTACCGCCAGGGCTGGCGGTGTTTTCTTGCCCATTATTAAGTCATTGTCACTCTCTGCTGGGAGTAAACCTGGTGACGCCTCCAAATCAAAGCTTGGTTCTTATCTCGTTATGTCTCAGTTTCAGTCCGCTGGTAACTCTAGTGCTCTTTTCTTAACGGCTGCAGCTCAAAATCTGCTGTGCCTTAAATTAGCAGAGGAACTTGGGGTGATAATTTCAAGCCCTTGGGTTTCTTGGTTCAAGGCTGCTAGCTTACCAGCACTTGTTTCGCTACTAGCTACTCCGCTAGTCTTATACAAGCTTTATCCTCCTGAAATCAAGGACACACCTGATGCCCCTGCCATGGCTACAAAAAAACTGGAGAGTATGGGTCCTGTCACAAAAAACGAATGCATTATGGTTGGTACAATGCTTCTTGCTGTTACTCTATGGGTCTGTGGAGAGGCTCTTGGTATAGCAAGTGTTGTAGCGGCAATGATTGGCTTATCTATACTTCTTTCGTTAGGCGTCCTTGATTGGGATGACTGCTTAAGTGAAAAATCAGCATGGGATACTTTGGCTTGGTTTGCTGTTCTAGTGGGTATGGCCGGCCAGTTGACAAACCTTGGTATTGTTAGCTGGATGTCTAATTGTGTAGCAAAGATCCTACAGTCTTACTCCTTGAGCTGGCCAGCTGCGTTTGGTTTTCTTCAGGCGGCTTACTTCTGCATCCACTACCTCTTTGCAAGTCAAACTGGTCATGTGGGAGCTTTATACTCTGCATTTCTTGCCATGAACTTGGCAGCTGGGGTACCTGCTATATTGGCAGCATTGGCTTTAGCTTACAACACAAATCTTTTTGGGGCTTTAACACATTATAGCAGTGGTCAGGCTGCTGTGTACTATGGAGCTGGTTATGTTGATCTTTCTGATGTGTTTAAAGTCGGCTTTATCATGGCTCTTGTTAATGCTGTCATCTGGACATTAGTAGGGTTGTTCTGGTGGAAATTTTTGGGCCTCTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003333 GO:0003674 GO:0005215 GO:0005310 GO:0005313 GO:0005326 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006536 GO:0006541 GO:0006807 GO:0006810 GO:0006811 GO:0006820 GO:0006835 GO:0006836 GO:0006855 GO:0006865 GO:0008150 GO:0008152 GO:0008509 GO:0008514 GO:0009064 GO:0009507 GO:0009526 GO:0009534 GO:0009536 GO:0009579 GO:0009605 GO:0009607 GO:0009624 GO:0009941 GO:0009987 GO:0015075 GO:0015131 GO:0015140 GO:0015171 GO:0015172 GO:0015179 GO:0015238 GO:0015318 GO:0015556 GO:0015711 GO:0015729 GO:0015740 GO:0015743 GO:0015800 GO:0015807 GO:0015813 GO:0015849 GO:0015893 GO:0016020 GO:0019676 GO:0019740 GO:0019752 GO:0022857 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0034220 GO:0042221 GO:0042493 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043648 GO:0044237 GO:0044238 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046942 GO:0046943 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0071423 GO:0071702 GO:0071704 GO:0071705 GO:0098656 GO:1901564 GO:1901605 GO:1902356 GO:1902475 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_sulph_symp

Protein Analysis

565

Amino Acids

60.08

Weight (kDa)

9.35

Isoelectric Point (pI)

40.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_sulph_symp	PF00939	97 - 564	2.6e-132	Sodium:sulfate symporter transmembrane region
CitMHS	PF03600	139 - 504	1.4e-15	Citrate transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011261)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64290
fragaria_vesca	FvH4_2g11840 FvH4_2g11840 FvH4_2g11840
malus_domestica	MD05G1045600.v1.1 MD10G1052600.v1.1
prunus_persica	Prupe.8G065200_v2.0.a1
pyrus_communis	pycom05g03800 pycom10g03760
rosa_chinensis	RchiOBHm_Chr6g0271491
rosa_laevigata	RLG00000013737
rosa_multiflora	Rmu_sc0001679.1_g000005
rosa_roxburghii	Rroxscaffold_7G00196990
rosa_rugosa	Rorug06G0061100
rosa_samantha	Rh6AG180300 Rh6BG186900 Rh6CG180100 Rh6DG172000
rosa_wichuraiana	Rw6G015480 Rw6G015590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1495
Acc65I	GGTACC	1 cut(s)	1483
AccB1I	GGYRCC	2 cut(s)	284, 1483
AccBSI	CCGCTC	1 cut(s)	78
AccII	CGCG	1 cut(s)	57
AccIII	TCCGGA	1 cut(s)	479
AclWI	GGATC	3 cut(s)	82, 90, 1330
AcoI	YGGCCR	3 cut(s)	1278, 1282, 1361
AcsI	RAATTY	1 cut(s)	1679
AcuI	CTGAAG	2 cut(s)	490, 1367
AcyI	GRCGYC	3 cut(s)	285, 771, 1200
AfaI	GTAC	4 cut(s)	694, 1099, 1485, 1574
AfiI	CCNNNNNNNGG	5 cut(s)	281, 340, 1036, 1210, 1359
AflII	CTTAAG	1 cut(s)	1222
AgsI	TTSAA	3 cut(s)	224, 912, 934
AjnI	CCWGG	4 cut(s)	374, 414, 701, 763
Alw21I	GWGCWC	2 cut(s)	632, 841
Alw26I	GTCTC	3 cut(s)	313, 481, 813
AlwI	GGATC	3 cut(s)	82, 90, 1330
Aor13HI	TCCGGA	1 cut(s)	479
AoxI	GGCC	9 cut(s)	322, 412, 457, 501, 666, 1278, 1282, 1361, 1687
ApeKI	GCWGC	7 cut(s)	854, 857, 938, 1367, 1475, 1499, 1565
ApoI	RAATTY	1 cut(s)	1679
Asp718I	GGTACC	1 cut(s)	1483
AspLEI	GCGC	3 cut(s)	59, 287, 443
AspS9I	GGNCC	5 cut(s)	343, 457, 667, 1064, 1687
AsuC2I	CCSGG	1 cut(s)	680
AsuHPI	GGTGA	4 cut(s)	141, 599, 779, 913
AsuNHI	GCTAGC	1 cut(s)	941
AvaII	GGWCC	2 cut(s)	343, 1064
BalI	TGGCCA	1 cut(s)	1363
BanI	GGYRCC	2 cut(s)	284, 1483
BauI	CACGAG	1 cut(s)	561
Bbv12I	GWGCWC	2 cut(s)	632, 841
BbvI	GCAGC	7 cut(s)	841, 869, 925, 1354, 1487, 1511, 1552
BccI	CCATC	4 cut(s)	116, 320, 398, 413
BceAI	ACGGC	2 cut(s)	88, 867
BcgI	CGANNNNNNTGC	2 cut(s)	942, 976
BciT130I	CCWGG	4 cut(s)	376, 416, 703, 765
BciVI	GTATCC	1 cut(s)	1237
BcnI	CCSGG	1 cut(s)	680
BcoDI	GTCTC	3 cut(s)	313, 481, 813
BfaI	CTAG	6 cut(s)	128, 834, 942, 968, 980, 1268
BfmI	CTRYAG	2 cut(s)	855, 1340
BfoI	RGCGCY	2 cut(s)	288, 444
BfrI	CTTAAG	1 cut(s)	1222
BfuAI	ACCTGC	1 cut(s)	1495
BfuI	GTATCC	1 cut(s)	1237
BmcAI	AGTACT	1 cut(s)	694
Bme1390I	CCNGG	5 cut(s)	376, 416, 680, 703, 765
Bme18I	GGWCC	2 cut(s)	343, 1064
BmgT120I	GGNCC	5 cut(s)	343, 457, 667, 1064, 1687
BmiI	GGNNCC	4 cut(s)	286, 345, 1065, 1485
BmrFI	CCNGG	5 cut(s)	376, 416, 680, 703, 765
BmrI	ACTGGG	1 cut(s)	684
BmsI	GCATC	3 cut(s)	140, 1015, 1410
BmtI	GCTAGC	1 cut(s)	945
BmuI	ACTGGG	1 cut(s)	684
BpmI	CTGGAG	1 cut(s)	1073
BpuEI	CTTGAG	2 cut(s)	264, 1375
BpuMI	CCSGG	1 cut(s)	680
BsaHI	GRCGYC	3 cut(s)	285, 771, 1200
BsaJI	CCNNGG	5 cut(s)	678, 702, 917, 1035, 1297
BsaWI	WCCGGW	1 cut(s)	479
BsaXI	ACNNNNNCTCC	2 cut(s)	11, 41
Bsc4I	CCNNNNNNNGG	5 cut(s)	281, 340, 1036, 1210, 1359
Bse118I	RCCGGY	2 cut(s)	410, 1280
Bse1I	ACTGG	4 cut(s)	690, 1056, 1285, 1432
Bse3DI	GCAATG	3 cut(s)	594, 690, 1173
BseAI	TCCGGA	1 cut(s)	479
BseBI	CCWGG	4 cut(s)	376, 416, 703, 765
BseDI	CCNNGG	5 cut(s)	678, 702, 917, 1035, 1297
BseGI	GGATG	4 cut(s)	179, 1219, 1320, 1401
BseLI	CCNNNNNNNGG	5 cut(s)	281, 340, 1036, 1210, 1359
BseMI	GCAATG	3 cut(s)	594, 690, 1173
BseMII	CTCAG	3 cut(s)	106, 436, 824
BseNI	ACTGG	4 cut(s)	690, 1056, 1285, 1432
BseRI	GAGGAG	1 cut(s)	228
BseXI	GCAGC	7 cut(s)	841, 869, 925, 1354, 1487, 1511, 1552
BseYI	CCCAGC	2 cut(s)	752, 1478
Bsh1236I	CGCG	1 cut(s)	57
BshFI	GGCC	9 cut(s)	324, 414, 459, 503, 668, 1280, 1284, 1363, 1689
BshNI	GGYRCC	2 cut(s)	284, 1483
BsiHKAI	GWGCWC	2 cut(s)	632, 841
BsiSI	CCGG	5 cut(s)	411, 480, 497, 680, 1281
BslFI	GGGAC	3 cut(s)	28, 281, 329
BslI	CCNNNNNNNGG	5 cut(s)	281, 340, 1036, 1210, 1359
BsmAI	GTCTC	3 cut(s)	313, 481, 813
BsmBI	CGTCTC	1 cut(s)	313
BsmFI	GGGAC	3 cut(s)	28, 281, 329
BsmI	GAATGC	1 cut(s)	1088
BsnI	GGCC	9 cut(s)	324, 414, 459, 503, 668, 1280, 1284, 1363, 1689
Bsp1286I	GDGCHC	2 cut(s)	632, 841
Bsp13I	TCCGGA	1 cut(s)	479
Bsp143I	GATC	6 cut(s)	87, 95, 146, 589, 1335, 1594
Bsp19I	CCATGG	1 cut(s)	1035
BspANI	GGCC	9 cut(s)	324, 414, 459, 503, 668, 1280, 1284, 1363, 1689
BspCNI	CTCAG	3 cut(s)	105, 435, 823
BspEI	TCCGGA	1 cut(s)	479
BspFNI	CGCG	1 cut(s)	57
BspLI	GGNNCC	4 cut(s)	286, 345, 1065, 1485
BspMAI	CTGCAG	1 cut(s)	859
BspMI	ACCTGC	1 cut(s)	1495
BspOI	GCTAGC	1 cut(s)	945
BspPI	GGATC	3 cut(s)	82, 90, 1330
BspQI	GCTCTTC	1 cut(s)	620
BspT107I	GGYRCC	2 cut(s)	284, 1483
BspTI	CTTAAG	1 cut(s)	1222
BsrBI	CCGCTC	1 cut(s)	78
BsrDI	GCAATG	3 cut(s)	594, 690, 1173
BsrFI	RCCGGY	2 cut(s)	410, 1280
BsrI	ACTGG	4 cut(s)	690, 1056, 1285, 1432
BssAI	RCCGGY	2 cut(s)	410, 1280
BssECI	CCNNGG	5 cut(s)	678, 702, 917, 1035, 1297
BssMI	GATC	6 cut(s)	87, 95, 146, 589, 1335, 1594
BssNI	GRCGYC	3 cut(s)	285, 771, 1200
BssSI	CACGAG	1 cut(s)	561
BssT1I	CCWWGG	3 cut(s)	917, 1035, 1297
Bst2BI	CACGAG	1 cut(s)	561
Bst2UI	CCWGG	4 cut(s)	376, 416, 703, 765
Bst4CI	ACNGT	1 cut(s)	1344
Bst6I	CTCTTC	1 cut(s)	620
BstACI	GRCGYC	3 cut(s)	285, 771, 1200
BstAFI	CTTAAG	1 cut(s)	1222
BstAPI	GCANNNNNTGC	1 cut(s)	1460
BstC8I	GCNNGC	7 cut(s)	412, 428, 709, 943, 1282, 1361, 1365
BstDEI	CTNAG	4 cut(s)	64, 92, 422, 810
BstDSI	CCRYGG	1 cut(s)	1035
BstF5I	GGATG	4 cut(s)	179, 1219, 1320, 1401
BstFNI	CGCG	1 cut(s)	57
BstH2I	RGCGCY	2 cut(s)	288, 444
BstHHI	GCGC	3 cut(s)	59, 287, 443
BstKTI	GATC	6 cut(s)	90, 98, 149, 592, 1338, 1597
BstMAI	GTCTC	3 cut(s)	313, 481, 813
BstMBI	GATC	6 cut(s)	87, 95, 146, 589, 1335, 1594
BstMWI	GCNNNNNNNGC	6 cut(s)	509, 674, 1259, 1460, 1496, 1505
BstNI	CCWGG	4 cut(s)	376, 416, 703, 765
BstSCI	CCNGG	5 cut(s)	374, 414, 678, 701, 763
BstSFI	CTRYAG	2 cut(s)	855, 1340
BstUI	CGCG	1 cut(s)	57
BstV1I	GCAGC	7 cut(s)	841, 869, 925, 1354, 1487, 1511, 1552
BstX2I	RGATCY	2 cut(s)	95, 1335
BstXI	CCANNNNNNTGG	2 cut(s)	375, 1471
BstYI	RGATCY	2 cut(s)	95, 1335
BsuI	GTATCC	1 cut(s)	1237
BsuRI	GGCC	9 cut(s)	324, 414, 459, 503, 668, 1280, 1284, 1363, 1689
BtgI	CCRYGG	1 cut(s)	1035
BtgZI	GCGATG	2 cut(s)	298, 391
BtsCI	GGATG	4 cut(s)	179, 1219, 1320, 1401
BtsI	GCAGTG	1 cut(s)	1561
BtsIMutI	CAGTG	2 cut(s)	514, 1561
BveI	ACCTGC	1 cut(s)	1495
Cac8I	GCNNGC	7 cut(s)	412, 428, 709, 943, 1282, 1361, 1365
CfoI	GCGC	3 cut(s)	59, 287, 443
Cfr10I	RCCGGY	2 cut(s)	410, 1280
Cfr13I	GGNCC	5 cut(s)	343, 457, 667, 1064, 1687
CseI	GACGC	2 cut(s)	779, 1189
CsiI	ACCWGGT	1 cut(s)	763
Csp6I	GTAC	4 cut(s)	693, 1098, 1484, 1573
CviAII	CATG	5 cut(s)	1036, 1239, 1433, 1465, 1627
CviQI	GTAC	4 cut(s)	693, 1098, 1484, 1573
DdeI	CTNAG	4 cut(s)	64, 92, 422, 810
DinI	GGCGCC	1 cut(s)	286
DpnI	GATC	6 cut(s)	89, 97, 148, 591, 1337, 1596
DpnII	GATC	6 cut(s)	87, 95, 146, 589, 1335, 1594
DraI	TTTAAA	1 cut(s)	1612
EaeI	YGGCCR	3 cut(s)	1278, 1282, 1361
Eam1104I	CTCTTC	1 cut(s)	620
EarI	CTCTTC	1 cut(s)	620
EciI	GGCGGA	2 cut(s)	59, 264
Eco130I	CCWWGG	3 cut(s)	917, 1035, 1297
Eco147I	AGGCCT	1 cut(s)	324
Eco47I	GGWCC	2 cut(s)	343, 1064
Eco57I	CTGAAG	2 cut(s)	490, 1367
EcoO109I	RGGNCCY	2 cut(s)	667, 1064
EcoRII	CCWGG	4 cut(s)	374, 414, 701, 763
EcoT14I	CCWWGG	3 cut(s)	917, 1035, 1297
EcoT22I	ATGCAT	1 cut(s)	1088
EgeI	GGCGCC	1 cut(s)	286
EheI	GGCGCC	1 cut(s)	286
ErhI	CCWWGG	3 cut(s)	917, 1035, 1297
Esp3I	CGTCTC	1 cut(s)	313
FaeI	CATG	5 cut(s)	1039, 1242, 1436, 1468, 1630
FaqI	GGGAC	3 cut(s)	28, 281, 329
FatI	CATG	5 cut(s)	1035, 1238, 1432, 1464, 1626
FauI	CCCGC	3 cut(s)	62, 108, 435
FokI	GGATG	4 cut(s)	166, 1226, 1327, 1388
FseI	GGCCGGCC	1 cut(s)	1284
FspBI	CTAG	6 cut(s)	128, 834, 942, 968, 980, 1268
GlaI	GCGC	3 cut(s)	58, 286, 442
GsaI	CCCAGC	2 cut(s)	756, 1482
GsuI	CTGGAG	1 cut(s)	1073
HaeII	RGCGCY	2 cut(s)	288, 444
HaeIII	GGCC	9 cut(s)	324, 414, 459, 503, 668, 1280, 1284, 1363, 1689
HapII	CCGG	5 cut(s)	411, 480, 497, 680, 1281
HgaI	GACGC	2 cut(s)	779, 1189
HhaI	GCGC	3 cut(s)	59, 287, 443
Hin1I	GRCGYC	3 cut(s)	285, 771, 1200
Hin1II	CATG	5 cut(s)	1039, 1242, 1436, 1468, 1630
Hin6I	GCGC	3 cut(s)	57, 285, 441
HinP1I	GCGC	3 cut(s)	57, 285, 441
HincII	GTYRAC	2 cut(s)	654, 1290
HindII	GTYRAC	2 cut(s)	654, 1290
HindIII	AAGCTT	2 cut(s)	785, 992
HinfI	GANTC	1 cut(s)	567
HpaII	CCGG	5 cut(s)	411, 480, 497, 680, 1281
HphI	GGTGA	4 cut(s)	141, 599, 779, 913
Hpy166II	GTNNAC	4 cut(s)	654, 761, 1290, 1573
Hpy188I	TCNGA	4 cut(s)	95, 146, 489, 1603
Hpy188III	TCNNGA	4 cut(s)	480, 574, 1004, 1651
Hpy8I	GTNNAC	4 cut(s)	654, 761, 1290, 1573
Hpy99I	CGWCG	2 cut(s)	359, 440
HpyAV	CCTTC	4 cut(s)	193, 310, 514, 559
HpyCH4III	ACNGT	1 cut(s)	1344
HpyCH4V	TGCA	5 cut(s)	857, 1086, 1401, 1418, 1454
HpyF10VI	GCNNNNNNNGC	6 cut(s)	509, 674, 1259, 1460, 1496, 1505
HpyF3I	CTNAG	4 cut(s)	64, 92, 422, 810
Hsp92I	GRCGYC	3 cut(s)	285, 771, 1200
Hsp92II	CATG	5 cut(s)	1039, 1242, 1436, 1468, 1630
HspAI	GCGC	3 cut(s)	57, 285, 441
KasI	GGCGCC	1 cut(s)	284
Kpn2I	TCCGGA	1 cut(s)	479
KpnI	GGTACC	1 cut(s)	1487
KroI	GCCGGC	2 cut(s)	410, 1280
KroNI	GCCGGC	2 cut(s)	412, 1282
Kzo9I	GATC	6 cut(s)	87, 95, 146, 589, 1335, 1594
LguI	GCTCTTC	1 cut(s)	620
LmnI	GCTCC	2 cut(s)	1439, 1580
Lsp1109I	GCAGC	7 cut(s)	841, 869, 925, 1354, 1487, 1511, 1552
LweI	GCATC	3 cut(s)	140, 1015, 1410
MabI	ACCWGGT	1 cut(s)	763
MaeI	CTAG	6 cut(s)	128, 834, 942, 968, 980, 1268
MaeIII	GTNAC	8 cut(s)	116, 175, 361, 741, 767, 827, 1069, 1114
MalI	GATC	6 cut(s)	89, 97, 148, 591, 1337, 1596
MbiI	CCGCTC	1 cut(s)	78
MboI	GATC	6 cut(s)	87, 95, 146, 589, 1335, 1594
MboII	GAAGA	3 cut(s)	385, 637, 1373
MfeI	CAATTG	1 cut(s)	380
MflI	RGATCY	2 cut(s)	95, 1335
MhlI	GDGCHC	2 cut(s)	632, 841
MlsI	TGGCCA	1 cut(s)	1363
MluCI	AATT	6 cut(s)	219, 380, 881, 906, 1321, 1679
MluNI	TGGCCA	1 cut(s)	1363
Mly113I	GGCGCC	1 cut(s)	285
Mox20I	TGGCCA	1 cut(s)	1363
Mph1103I	ATGCAT	1 cut(s)	1088
MroI	TCCGGA	1 cut(s)	479
MroNI	GCCGGC	2 cut(s)	410, 1280
MscI	TGGCCA	1 cut(s)	1363
MseI	TTAA	7 cut(s)	732, 848, 879, 1223, 1541, 1611, 1638
Msp20I	TGGCCA	1 cut(s)	1363
MspA1I	CMGCKG	3 cut(s)	824, 1367, 1478
MspCI	CTTAAG	1 cut(s)	1222
MspI	CCGG	5 cut(s)	411, 480, 497, 680, 1281
MspR9I	CCNGG	5 cut(s)	376, 416, 680, 703, 765
MunI	CAATTG	1 cut(s)	380
Mva1269I	GAATGC	1 cut(s)	1088
MvaI	CCWGG	4 cut(s)	376, 416, 703, 765
MvnI	CGCG	1 cut(s)	57
MwoI	GCNNNNNNNGC	6 cut(s)	509, 674, 1259, 1460, 1496, 1505
NaeI	GCCGGC	2 cut(s)	412, 1282
NarI	GGCGCC	1 cut(s)	285
NciI	CCSGG	1 cut(s)	680
NcoI	CCATGG	1 cut(s)	1035
NdeII	GATC	6 cut(s)	87, 95, 146, 589, 1335, 1594
NgoMIV	GCCGGC	2 cut(s)	410, 1280
NheI	GCTAGC	1 cut(s)	941
NlaIII	CATG	5 cut(s)	1039, 1242, 1436, 1468, 1630
NlaIV	GGNNCC	4 cut(s)	286, 345, 1065, 1485
NmuCI	GTSAC	5 cut(s)	175, 361, 741, 767, 1069
NsiI	ATGCAT	1 cut(s)	1088
PceI	AGGCCT	1 cut(s)	324
PciSI	GCTCTTC	1 cut(s)	620
PctI	GAATGC	1 cut(s)	1088
PdiI	GCCGGC	2 cut(s)	412, 1282
PfeI	GAWTC	1 cut(s)	567
PluTI	GGCGCC	1 cut(s)	288
PpuMI	RGGWCCY	1 cut(s)	1064
Psp5II	RGGWCCY	1 cut(s)	1064
Psp6I	CCWGG	4 cut(s)	374, 414, 701, 763
PspFI	CCCAGC	2 cut(s)	752, 1478
PspGI	CCWGG	4 cut(s)	374, 414, 701, 763
PspN4I	GGNNCC	4 cut(s)	286, 345, 1065, 1485
PspPI	GGNCC	5 cut(s)	343, 457, 667, 1064, 1687
PspPPI	RGGWCCY	1 cut(s)	1064
PstI	CTGCAG	1 cut(s)	859
PsuI	RGATCY	2 cut(s)	95, 1335
PvuII	CAGCTG	2 cut(s)	1367, 1478
RigI	GGCCGGCC	1 cut(s)	1284
RsaI	GTAC	4 cut(s)	694, 1099, 1485, 1574
RsaNI	GTAC	4 cut(s)	693, 1098, 1484, 1573
SapI	GCTCTTC	1 cut(s)	620
SaqAI	TTAA	7 cut(s)	732, 848, 879, 1223, 1541, 1611, 1638
Sau3AI	GATC	6 cut(s)	87, 95, 146, 589, 1335, 1594
Sau96I	GGNCC	5 cut(s)	343, 457, 667, 1064, 1687
ScaI	AGTACT	1 cut(s)	694
ScrFI	CCNGG	5 cut(s)	376, 416, 680, 703, 765
SduI	GDGCHC	2 cut(s)	632, 841
SexAI	ACCWGGT	1 cut(s)	763
SfaNI	GCATC	3 cut(s)	140, 1015, 1410
SfcI	CTRYAG	2 cut(s)	855, 1340
SfoI	GGCGCC	1 cut(s)	286
SinI	GGWCC	2 cut(s)	343, 1064
SmlI	CTYRAG	3 cut(s)	279, 1222, 1354
SmoI	CTYRAG	3 cut(s)	279, 1222, 1354
Sse9I	AATT	6 cut(s)	219, 380, 881, 906, 1321, 1679
SseBI	AGGCCT	1 cut(s)	324
SspDI	GGCGCC	1 cut(s)	284
SspMI	CTAG	6 cut(s)	128, 834, 942, 968, 980, 1268
StuI	AGGCCT	1 cut(s)	324
StyD4I	CCNGG	5 cut(s)	374, 414, 678, 701, 763
StyI	CCWWGG	3 cut(s)	917, 1035, 1297
TaaI	ACNGT	1 cut(s)	1344
TaqI	TCGA	1 cut(s)	357
TasI	AATT	6 cut(s)	219, 380, 881, 906, 1321, 1679
TatI	WGTACW	2 cut(s)	692, 1572
TauI	GCSGC	5 cut(s)	75, 78, 503, 1166, 1391
TfiI	GAWTC	1 cut(s)	567
Tru1I	TTAA	7 cut(s)	732, 848, 879, 1223, 1541, 1611, 1638
Tru9I	TTAA	7 cut(s)	732, 848, 879, 1223, 1541, 1611, 1638
TscAI	CASTG	2 cut(s)	514, 1561
TseFI	GTSAC	5 cut(s)	175, 361, 741, 767, 1069
TseI	GCWGC	7 cut(s)	854, 857, 938, 1367, 1475, 1499, 1565
Tsp45I	GTSAC	5 cut(s)	175, 361, 741, 767, 1069
TspDTI	ATGAA	2 cut(s)	292, 1481
TspGWI	ACGGA	1 cut(s)	460
TspRI	CASTG	2 cut(s)	514, 1561
Vha464I	CTTAAG	1 cut(s)	1222
VpaK11BI	GGWCC	2 cut(s)	343, 1064
XapI	RAATTY	1 cut(s)	1679
XcmI	CCANNNNNNNNNTGG	1 cut(s)	412
XspI	CTAG	6 cut(s)	128, 834, 942, 968, 980, 1268
ZrmI	AGTACT	1 cut(s)	694
Zsp2I	ATGCAT	1 cut(s)	1088

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.