Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0011261

Physical Location & Seq

Genomic Coordinates Forward (+)

28652401 .. 28658599

Gene Structure 6199 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG180100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1611 bp

ATGGAGAGCTTCCTCCACTCTCTCTCCACCTCGTCCTTGTCCCTCTCTACCCGCGCTTCCTTAGTCCGCCGCCGCTCAAAACCGATCCTCAGATCCCCGCCGTCCATCTCTCGTAACAACCCCCTAGCATCTCACTCCCTCCGATCACCCATTCTCTTTGCCTCAAACCCCGTCACATCCTTCTCTCCTTTACCAAATAACAAGACCCATTTCCCAATTCAAGCCTCCCAATCTCCTCAATCCCAAACCAGCCTCACACCGCCTCCGCCTCAAGGCGCCAAAATCGTCCCCTTCATCGTCTCCATCGCCGTAGGCCTTGTTGTCCGCTTCTTGGTCCCCAAACCCGTCGAAGTGACCCCACAAGCCTGGCAATTGCTCTCCATCTTCCTCTCCACCATCGCCGGCCTGGTTCTCAGCCCGCTACCCGTCGGCGCTTGGGCTTTTCTGGGCCTCACAACCTCCGTAGTCTCCGGAACTCTGACATTTCCGGCGGCCTTCAGTGCTTTTACTAACGAAGTAATATGGTTGATTGTGATTTCCTTCTTTTTCGCTCGTGGATTCGTCAAGACGGGTTTGGGTGATCGCATTGCGACCTACTTTGTCAAGTGGTTGGGGAAGAGCACTCTGGGGTTGTCTTATGGGTTGACCATTAGCGAGGCCCTTATTGCCCCGGCAATGCCCAGTACTACCGCCAGGGCTGGCGGTGTTTTCTTGCCCATTATTAAGTCATTGTCACTCTCTGCTGGGAGTAAACCTGGTGACGCCTCCAAATCAAAGCTTGGTTCTTATCTCGTTATGTCTCAGTTTCAGTCCGCTGGTAACTCTAGTGCTCTTTTCTTAACGGCTGCAGCTCAAAATCTGCTGTGCCTTAAATTAGCAGAGGAACTTGGGGTGATAATTTCAAGCCCTTGGGTTTCTTGGTTCAAGGCTGCTAGCTTACCAGCACTCGTTTCGCTACTAGCTACTCCGCTAGTCTTATACAAGCTTTATCCTCCTGAAATCAAGGACACACCTGATGCCCCTGCCATGGCTACAAAAAAACTGGAGAGTATGGGTCCTGTCACAAAAAACGAATGCATTATGGTTGGTACAATGCTTCTTGCTGTTACTCTATGGGTCTGTGGAGAGGCTCTTGGTATAGCAAGTGTTGTAGCGGCAATGATTGGCTTATCTATACTTCTTTCGTTAGGCGTCCTTGATTGGGATGACTGCTTAAGTGAAAAATCAGCATGGGATACTTTGGCTTGGTTTGCTGTTCTAGTGGGTATGGCCGGCCAGTTGACAAACCTTGGTATTGTTAGCTGGATGTCTAATTGTGTAGCAAAGATCCTACAGTCTTACTCCTTGAGCTGGCCAGCTGCGTTCGGTTTTCTTCAGGCGGCTTACTTCTGCATCCACTACCTCTTTGCAAGTCAAACTGGTCATGTGGGAGCTTTATACTCTGCATTTCTTGCCATGAACTTGGCAGCTGGGGTACCTGCTATATTGGCAGCATTGGCTTTAGCTTACAACACAAATCTTTTTGGGGCTTTAACACATTATAGCAGTGGTCAGGCTGCTGTGTACTATGGAGGTATGCTCAATTCCCCCTCGCTTGCCCTACTTTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003333 GO:0003674 GO:0005215 GO:0005310 GO:0005313 GO:0005326 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006536 GO:0006541 GO:0006807 GO:0006810 GO:0006811 GO:0006820 GO:0006835 GO:0006836 GO:0006855 GO:0006865 GO:0008150 GO:0008152 GO:0008509 GO:0008514 GO:0009064 GO:0009507 GO:0009526 GO:0009534 GO:0009536 GO:0009579 GO:0009605 GO:0009607 GO:0009624 GO:0009941 GO:0009987 GO:0015075 GO:0015131 GO:0015140 GO:0015171 GO:0015172 GO:0015179 GO:0015238 GO:0015318 GO:0015556 GO:0015711 GO:0015729 GO:0015740 GO:0015743 GO:0015800 GO:0015807 GO:0015813 GO:0015849 GO:0015893 GO:0016020 GO:0019676 GO:0019740 GO:0019752 GO:0022857 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0034220 GO:0042221 GO:0042493 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043648 GO:0044237 GO:0044238 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046942 GO:0046943 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0071423 GO:0071702 GO:0071704 GO:0071705 GO:0098656 GO:1901564 GO:1901605 GO:1902356 GO:1902475 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_sulph_symp

Protein Analysis

536

Amino Acids

56.67

Weight (kDa)

9.4

Isoelectric Point (pI)

44.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_sulph_symp	PF00939	94 - 525	2.9e-121	Sodium:sulfate symporter transmembrane region
CitMHS	PF03600	136 - 502	1.7e-14	Citrate transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011261)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64290
fragaria_vesca	FvH4_2g11840 FvH4_2g11840 FvH4_2g11840
malus_domestica	MD05G1045600.v1.1 MD10G1052600.v1.1
prunus_persica	Prupe.8G065200_v2.0.a1
pyrus_communis	pycom05g03800 pycom10g03760
rosa_chinensis	RchiOBHm_Chr6g0271491
rosa_laevigata	RLG00000013737
rosa_multiflora	Rmu_sc0001679.1_g000005
rosa_roxburghii	Rroxscaffold_7G00196990
rosa_rugosa	Rorug06G0061100
rosa_samantha	Rh6AG180300 Rh6BG186900 Rh6CG180100 Rh6DG172000
rosa_wichuraiana	Rw6G015480 Rw6G015590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1486
Acc65I	GGTACC	1 cut(s)	1474
AccB1I	GGYRCC	2 cut(s)	275, 1474
AccBSI	CCGCTC	1 cut(s)	75
AccII	CGCG	1 cut(s)	54
AccIII	TCCGGA	1 cut(s)	470
AclWI	GGATC	3 cut(s)	79, 87, 1321
AcoI	YGGCCR	3 cut(s)	1269, 1273, 1352
AcuI	CTGAAG	2 cut(s)	481, 1358
AcyI	GRCGYC	3 cut(s)	276, 762, 1191
AfaI	GTAC	4 cut(s)	685, 1090, 1476, 1565
AfiI	CCNNNNNNNGG	5 cut(s)	272, 331, 1027, 1201, 1350
AflII	CTTAAG	1 cut(s)	1213
AgsI	TTSAA	3 cut(s)	221, 903, 925
AjnI	CCWGG	4 cut(s)	365, 405, 692, 754
Alw21I	GWGCWC	2 cut(s)	623, 832
Alw26I	GTCTC	3 cut(s)	304, 472, 804
AlwI	GGATC	3 cut(s)	79, 87, 1321
Aor13HI	TCCGGA	1 cut(s)	470
AoxI	GGCC	8 cut(s)	313, 403, 448, 492, 657, 1269, 1273, 1352
ApeKI	GCWGC	7 cut(s)	845, 848, 929, 1358, 1466, 1490, 1556
Asp718I	GGTACC	1 cut(s)	1474
AspLEI	GCGC	3 cut(s)	56, 278, 434
AspS9I	GGNCC	4 cut(s)	334, 448, 658, 1055
AsuC2I	CCSGG	1 cut(s)	671
AsuHPI	GGTGA	4 cut(s)	138, 590, 770, 904
AsuNHI	GCTAGC	1 cut(s)	932
AvaII	GGWCC	2 cut(s)	334, 1055
BalI	TGGCCA	1 cut(s)	1354
BanI	GGYRCC	2 cut(s)	275, 1474
BauI	CACGAG	1 cut(s)	552
Bbv12I	GWGCWC	2 cut(s)	623, 832
BbvI	GCAGC	7 cut(s)	832, 860, 916, 1345, 1478, 1502, 1543
BccI	CCATC	4 cut(s)	113, 311, 389, 404
BceAI	ACGGC	3 cut(s)	85, 293, 858
BcgI	CGANNNNNNTGC	2 cut(s)	933, 967
BciT130I	CCWGG	4 cut(s)	367, 407, 694, 756
BciVI	GTATCC	1 cut(s)	1228
BcnI	CCSGG	1 cut(s)	671
BcoDI	GTCTC	3 cut(s)	304, 472, 804
BfaI	CTAG	6 cut(s)	125, 825, 933, 959, 971, 1259
BfmI	CTRYAG	2 cut(s)	846, 1331
BfoI	RGCGCY	2 cut(s)	279, 435
BfrI	CTTAAG	1 cut(s)	1213
BfuAI	ACCTGC	1 cut(s)	1486
BfuI	GTATCC	1 cut(s)	1228
BmcAI	AGTACT	1 cut(s)	685
Bme1390I	CCNGG	5 cut(s)	367, 407, 671, 694, 756
Bme18I	GGWCC	2 cut(s)	334, 1055
BmgT120I	GGNCC	4 cut(s)	334, 448, 658, 1055
BmiI	GGNNCC	4 cut(s)	277, 336, 1056, 1476
BmrFI	CCNGG	5 cut(s)	367, 407, 671, 694, 756
BmrI	ACTGGG	1 cut(s)	675
BmsI	GCATC	3 cut(s)	137, 1006, 1401
BmtI	GCTAGC	1 cut(s)	936
BmuI	ACTGGG	1 cut(s)	675
BplI	GAGNNNNNCTC	2 cut(s)	1563, 1595
BpmI	CTGGAG	1 cut(s)	1064
BpuEI	CTTGAG	2 cut(s)	255, 1366
BpuMI	CCSGG	1 cut(s)	671
BsaHI	GRCGYC	3 cut(s)	276, 762, 1191
BsaJI	CCNNGG	5 cut(s)	669, 693, 908, 1026, 1288
BsaWI	WCCGGW	1 cut(s)	470
BsaXI	ACNNNNNCTCC	4 cut(s)	8, 38, 247, 277
Bsc4I	CCNNNNNNNGG	5 cut(s)	272, 331, 1027, 1201, 1350
Bse118I	RCCGGY	2 cut(s)	401, 1271
Bse1I	ACTGG	4 cut(s)	681, 1047, 1276, 1423
Bse3DI	GCAATG	3 cut(s)	585, 681, 1164
BseAI	TCCGGA	1 cut(s)	470
BseBI	CCWGG	4 cut(s)	367, 407, 694, 756
BseDI	CCNNGG	5 cut(s)	669, 693, 908, 1026, 1288
BseGI	GGATG	4 cut(s)	176, 1210, 1311, 1392
BseLI	CCNNNNNNNGG	5 cut(s)	272, 331, 1027, 1201, 1350
BseMI	GCAATG	3 cut(s)	585, 681, 1164
BseMII	CTCAG	3 cut(s)	103, 427, 815
BseNI	ACTGG	4 cut(s)	681, 1047, 1276, 1423
BseRI	GAGGAG	1 cut(s)	225
BseXI	GCAGC	7 cut(s)	832, 860, 916, 1345, 1478, 1502, 1543
BseYI	CCCAGC	2 cut(s)	743, 1469
Bsh1236I	CGCG	1 cut(s)	54
BshFI	GGCC	8 cut(s)	315, 405, 450, 494, 659, 1271, 1275, 1354
BshNI	GGYRCC	2 cut(s)	275, 1474
BsiHKAI	GWGCWC	2 cut(s)	623, 832
BsiSI	CCGG	5 cut(s)	402, 471, 488, 671, 1272
BslFI	GGGAC	3 cut(s)	25, 272, 320
BslI	CCNNNNNNNGG	5 cut(s)	272, 331, 1027, 1201, 1350
BsmAI	GTCTC	3 cut(s)	304, 472, 804
BsmBI	CGTCTC	1 cut(s)	304
BsmFI	GGGAC	3 cut(s)	25, 272, 320
BsmI	GAATGC	1 cut(s)	1079
BsnI	GGCC	8 cut(s)	315, 405, 450, 494, 659, 1271, 1275, 1354
Bsp1286I	GDGCHC	2 cut(s)	623, 832
Bsp13I	TCCGGA	1 cut(s)	470
Bsp143I	GATC	5 cut(s)	84, 92, 143, 580, 1326
Bsp19I	CCATGG	1 cut(s)	1026
BspANI	GGCC	8 cut(s)	315, 405, 450, 494, 659, 1271, 1275, 1354
BspCNI	CTCAG	3 cut(s)	102, 426, 814
BspEI	TCCGGA	1 cut(s)	470
BspFNI	CGCG	1 cut(s)	54
BspLI	GGNNCC	4 cut(s)	277, 336, 1056, 1476
BspMAI	CTGCAG	1 cut(s)	850
BspMI	ACCTGC	1 cut(s)	1486
BspOI	GCTAGC	1 cut(s)	936
BspPI	GGATC	3 cut(s)	79, 87, 1321
BspQI	GCTCTTC	1 cut(s)	611
BspT107I	GGYRCC	2 cut(s)	275, 1474
BspTI	CTTAAG	1 cut(s)	1213
BsrBI	CCGCTC	1 cut(s)	75
BsrDI	GCAATG	3 cut(s)	585, 681, 1164
BsrFI	RCCGGY	2 cut(s)	401, 1271
BsrI	ACTGG	4 cut(s)	681, 1047, 1276, 1423
BssAI	RCCGGY	2 cut(s)	401, 1271
BssECI	CCNNGG	5 cut(s)	669, 693, 908, 1026, 1288
BssMI	GATC	5 cut(s)	84, 92, 143, 580, 1326
BssNI	GRCGYC	3 cut(s)	276, 762, 1191
BssSI	CACGAG	1 cut(s)	552
BssT1I	CCWWGG	3 cut(s)	908, 1026, 1288
Bst2BI	CACGAG	1 cut(s)	552
Bst2UI	CCWGG	4 cut(s)	367, 407, 694, 756
Bst4CI	ACNGT	1 cut(s)	1335
Bst6I	CTCTTC	1 cut(s)	611
BstACI	GRCGYC	3 cut(s)	276, 762, 1191
BstAFI	CTTAAG	1 cut(s)	1213
BstAPI	GCANNNNNTGC	1 cut(s)	1451
BstC8I	GCNNGC	8 cut(s)	403, 419, 700, 934, 1273, 1352, 1356, 1596
BstDEI	CTNAG	4 cut(s)	61, 89, 413, 801
BstDSI	CCRYGG	1 cut(s)	1026
BstF5I	GGATG	4 cut(s)	176, 1210, 1311, 1392
BstFNI	CGCG	1 cut(s)	54
BstH2I	RGCGCY	2 cut(s)	279, 435
BstHHI	GCGC	3 cut(s)	56, 278, 434
BstKTI	GATC	5 cut(s)	87, 95, 146, 583, 1329
BstMAI	GTCTC	3 cut(s)	304, 472, 804
BstMBI	GATC	5 cut(s)	84, 92, 143, 580, 1326
BstMWI	GCNNNNNNNGC	6 cut(s)	500, 665, 1250, 1451, 1487, 1496
BstNI	CCWGG	4 cut(s)	367, 407, 694, 756
BstSCI	CCNGG	5 cut(s)	365, 405, 669, 692, 754
BstSFI	CTRYAG	2 cut(s)	846, 1331
BstUI	CGCG	1 cut(s)	54
BstV1I	GCAGC	7 cut(s)	832, 860, 916, 1345, 1478, 1502, 1543
BstX2I	RGATCY	2 cut(s)	92, 1326
BstXI	CCANNNNNNTGG	2 cut(s)	366, 1462
BstYI	RGATCY	2 cut(s)	92, 1326
BsuI	GTATCC	1 cut(s)	1228
BsuRI	GGCC	8 cut(s)	315, 405, 450, 494, 659, 1271, 1275, 1354
BtgI	CCRYGG	1 cut(s)	1026
BtgZI	GCGATG	2 cut(s)	289, 382
BtsCI	GGATG	4 cut(s)	176, 1210, 1311, 1392
BtsI	GCAGTG	1 cut(s)	1552
BtsIMutI	CAGTG	2 cut(s)	505, 1552
BveI	ACCTGC	1 cut(s)	1486
Cac8I	GCNNGC	8 cut(s)	403, 419, 700, 934, 1273, 1352, 1356, 1596
CfoI	GCGC	3 cut(s)	56, 278, 434
Cfr10I	RCCGGY	2 cut(s)	401, 1271
Cfr13I	GGNCC	4 cut(s)	334, 448, 658, 1055
CseI	GACGC	2 cut(s)	770, 1180
CsiI	ACCWGGT	1 cut(s)	754
Csp6I	GTAC	4 cut(s)	684, 1089, 1475, 1564
CviAII	CATG	4 cut(s)	1027, 1230, 1424, 1456
CviQI	GTAC	4 cut(s)	684, 1089, 1475, 1564
DdeI	CTNAG	4 cut(s)	61, 89, 413, 801
DinI	GGCGCC	1 cut(s)	277
DpnI	GATC	5 cut(s)	86, 94, 145, 582, 1328
DpnII	GATC	5 cut(s)	84, 92, 143, 580, 1326
EaeI	YGGCCR	3 cut(s)	1269, 1273, 1352
Eam1104I	CTCTTC	1 cut(s)	611
EarI	CTCTTC	1 cut(s)	611
EciI	GGCGGA	2 cut(s)	56, 255
Eco130I	CCWWGG	3 cut(s)	908, 1026, 1288
Eco147I	AGGCCT	1 cut(s)	315
Eco47I	GGWCC	2 cut(s)	334, 1055
Eco57I	CTGAAG	2 cut(s)	481, 1358
EcoO109I	RGGNCCY	2 cut(s)	658, 1055
EcoRII	CCWGG	4 cut(s)	365, 405, 692, 754
EcoT14I	CCWWGG	3 cut(s)	908, 1026, 1288
EcoT22I	ATGCAT	1 cut(s)	1079
EgeI	GGCGCC	1 cut(s)	277
EheI	GGCGCC	1 cut(s)	277
ErhI	CCWWGG	3 cut(s)	908, 1026, 1288
Esp3I	CGTCTC	1 cut(s)	304
FaeI	CATG	4 cut(s)	1030, 1233, 1427, 1459
FaqI	GGGAC	3 cut(s)	25, 272, 320
FatI	CATG	4 cut(s)	1026, 1229, 1423, 1455
FauI	CCCGC	3 cut(s)	59, 105, 426
FokI	GGATG	4 cut(s)	163, 1217, 1318, 1379
FseI	GGCCGGCC	1 cut(s)	1275
FspBI	CTAG	6 cut(s)	125, 825, 933, 959, 971, 1259
GlaI	GCGC	3 cut(s)	55, 277, 433
GsaI	CCCAGC	2 cut(s)	747, 1473
GsuI	CTGGAG	1 cut(s)	1064
HaeII	RGCGCY	2 cut(s)	279, 435
HaeIII	GGCC	8 cut(s)	315, 405, 450, 494, 659, 1271, 1275, 1354
HapII	CCGG	5 cut(s)	402, 471, 488, 671, 1272
HgaI	GACGC	2 cut(s)	770, 1180
HhaI	GCGC	3 cut(s)	56, 278, 434
Hin1I	GRCGYC	3 cut(s)	276, 762, 1191
Hin1II	CATG	4 cut(s)	1030, 1233, 1427, 1459
Hin6I	GCGC	3 cut(s)	54, 276, 432
HinP1I	GCGC	3 cut(s)	54, 276, 432
HincII	GTYRAC	2 cut(s)	645, 1281
HindII	GTYRAC	2 cut(s)	645, 1281
HindIII	AAGCTT	2 cut(s)	776, 983
HinfI	GANTC	1 cut(s)	558
HpaII	CCGG	5 cut(s)	402, 471, 488, 671, 1272
HphI	GGTGA	4 cut(s)	138, 590, 770, 904
Hpy166II	GTNNAC	4 cut(s)	645, 752, 1281, 1564
Hpy188I	TCNGA	3 cut(s)	92, 143, 480
Hpy188III	TCNNGA	3 cut(s)	471, 565, 995
Hpy8I	GTNNAC	4 cut(s)	645, 752, 1281, 1564
Hpy99I	CGWCG	2 cut(s)	350, 431
HpyAV	CCTTC	4 cut(s)	190, 301, 505, 550
HpyCH4III	ACNGT	1 cut(s)	1335
HpyCH4V	TGCA	5 cut(s)	848, 1077, 1392, 1409, 1445
HpyF10VI	GCNNNNNNNGC	6 cut(s)	500, 665, 1250, 1451, 1487, 1496
HpyF3I	CTNAG	4 cut(s)	61, 89, 413, 801
Hsp92I	GRCGYC	3 cut(s)	276, 762, 1191
Hsp92II	CATG	4 cut(s)	1030, 1233, 1427, 1459
HspAI	GCGC	3 cut(s)	54, 276, 432
KasI	GGCGCC	1 cut(s)	275
Kpn2I	TCCGGA	1 cut(s)	470
KpnI	GGTACC	1 cut(s)	1478
KroI	GCCGGC	2 cut(s)	401, 1271
KroNI	GCCGGC	2 cut(s)	403, 1273
Kzo9I	GATC	5 cut(s)	84, 92, 143, 580, 1326
LguI	GCTCTTC	1 cut(s)	611
LmnI	GCTCC	1 cut(s)	1430
Lsp1109I	GCAGC	7 cut(s)	832, 860, 916, 1345, 1478, 1502, 1543
LweI	GCATC	3 cut(s)	137, 1006, 1401
MabI	ACCWGGT	1 cut(s)	754
MaeI	CTAG	6 cut(s)	125, 825, 933, 959, 971, 1259
MaeIII	GTNAC	8 cut(s)	113, 172, 352, 732, 758, 818, 1060, 1105
MalI	GATC	5 cut(s)	86, 94, 145, 582, 1328
MbiI	CCGCTC	1 cut(s)	75
MboI	GATC	5 cut(s)	84, 92, 143, 580, 1326
MboII	GAAGA	3 cut(s)	376, 628, 1364
MfeI	CAATTG	1 cut(s)	371
MflI	RGATCY	2 cut(s)	92, 1326
MhlI	GDGCHC	2 cut(s)	623, 832
MlsI	TGGCCA	1 cut(s)	1354
MluCI	AATT	6 cut(s)	216, 371, 872, 897, 1312, 1582
MluNI	TGGCCA	1 cut(s)	1354
Mly113I	GGCGCC	1 cut(s)	276
Mox20I	TGGCCA	1 cut(s)	1354
Mph1103I	ATGCAT	1 cut(s)	1079
MroI	TCCGGA	1 cut(s)	470
MroNI	GCCGGC	2 cut(s)	401, 1271
MscI	TGGCCA	1 cut(s)	1354
MseI	TTAA	5 cut(s)	723, 839, 870, 1214, 1532
Msp20I	TGGCCA	1 cut(s)	1354
MspA1I	CMGCKG	3 cut(s)	815, 1358, 1469
MspCI	CTTAAG	1 cut(s)	1213
MspI	CCGG	5 cut(s)	402, 471, 488, 671, 1272
MspR9I	CCNGG	5 cut(s)	367, 407, 671, 694, 756
MunI	CAATTG	1 cut(s)	371
Mva1269I	GAATGC	1 cut(s)	1079
MvaI	CCWGG	4 cut(s)	367, 407, 694, 756
MvnI	CGCG	1 cut(s)	54
MwoI	GCNNNNNNNGC	6 cut(s)	500, 665, 1250, 1451, 1487, 1496
NaeI	GCCGGC	2 cut(s)	403, 1273
NarI	GGCGCC	1 cut(s)	276
NciI	CCSGG	1 cut(s)	671
NcoI	CCATGG	1 cut(s)	1026
NdeII	GATC	5 cut(s)	84, 92, 143, 580, 1326
NgoMIV	GCCGGC	2 cut(s)	401, 1271
NheI	GCTAGC	1 cut(s)	932
NlaIII	CATG	4 cut(s)	1030, 1233, 1427, 1459
NlaIV	GGNNCC	4 cut(s)	277, 336, 1056, 1476
NmuCI	GTSAC	5 cut(s)	172, 352, 732, 758, 1060
NsiI	ATGCAT	1 cut(s)	1079
PceI	AGGCCT	1 cut(s)	315
PciSI	GCTCTTC	1 cut(s)	611
PctI	GAATGC	1 cut(s)	1079
PdiI	GCCGGC	2 cut(s)	403, 1273
PfeI	GAWTC	1 cut(s)	558
PluTI	GGCGCC	1 cut(s)	279
PpuMI	RGGWCCY	1 cut(s)	1055
Psp5II	RGGWCCY	1 cut(s)	1055
Psp6I	CCWGG	4 cut(s)	365, 405, 692, 754
PspFI	CCCAGC	2 cut(s)	743, 1469
PspGI	CCWGG	4 cut(s)	365, 405, 692, 754
PspN4I	GGNNCC	4 cut(s)	277, 336, 1056, 1476
PspPI	GGNCC	4 cut(s)	334, 448, 658, 1055
PspPPI	RGGWCCY	1 cut(s)	1055
PstI	CTGCAG	1 cut(s)	850
PsuI	RGATCY	2 cut(s)	92, 1326
PvuII	CAGCTG	2 cut(s)	1358, 1469
RigI	GGCCGGCC	1 cut(s)	1275
RsaI	GTAC	4 cut(s)	685, 1090, 1476, 1565
RsaNI	GTAC	4 cut(s)	684, 1089, 1475, 1564
SapI	GCTCTTC	1 cut(s)	611
SaqAI	TTAA	5 cut(s)	723, 839, 870, 1214, 1532
Sau3AI	GATC	5 cut(s)	84, 92, 143, 580, 1326
Sau96I	GGNCC	4 cut(s)	334, 448, 658, 1055
ScaI	AGTACT	1 cut(s)	685
ScrFI	CCNGG	5 cut(s)	367, 407, 671, 694, 756
SduI	GDGCHC	2 cut(s)	623, 832
SexAI	ACCWGGT	1 cut(s)	754
SfaNI	GCATC	3 cut(s)	137, 1006, 1401
SfcI	CTRYAG	2 cut(s)	846, 1331
SfoI	GGCGCC	1 cut(s)	277
SinI	GGWCC	2 cut(s)	334, 1055
SmlI	CTYRAG	3 cut(s)	270, 1213, 1345
SmoI	CTYRAG	3 cut(s)	270, 1213, 1345
Sse9I	AATT	6 cut(s)	216, 371, 872, 897, 1312, 1582
SseBI	AGGCCT	1 cut(s)	315
SspDI	GGCGCC	1 cut(s)	275
SspMI	CTAG	6 cut(s)	125, 825, 933, 959, 971, 1259
StuI	AGGCCT	1 cut(s)	315
StyD4I	CCNGG	5 cut(s)	365, 405, 669, 692, 754
StyI	CCWWGG	3 cut(s)	908, 1026, 1288
TaaI	ACNGT	1 cut(s)	1335
TaqI	TCGA	1 cut(s)	348
TasI	AATT	6 cut(s)	216, 371, 872, 897, 1312, 1582
TatI	WGTACW	2 cut(s)	683, 1563
TauI	GCSGC	5 cut(s)	72, 75, 494, 1157, 1382
TfiI	GAWTC	1 cut(s)	558
Tru1I	TTAA	5 cut(s)	723, 839, 870, 1214, 1532
Tru9I	TTAA	5 cut(s)	723, 839, 870, 1214, 1532
TscAI	CASTG	2 cut(s)	505, 1552
TseFI	GTSAC	5 cut(s)	172, 352, 732, 758, 1060
TseI	GCWGC	7 cut(s)	845, 848, 929, 1358, 1466, 1490, 1556
Tsp45I	GTSAC	5 cut(s)	172, 352, 732, 758, 1060
TspDTI	ATGAA	2 cut(s)	283, 1472
TspGWI	ACGGA	1 cut(s)	451
TspRI	CASTG	2 cut(s)	505, 1552
Vha464I	CTTAAG	1 cut(s)	1213
VpaK11BI	GGWCC	2 cut(s)	334, 1055
XcmI	CCANNNNNNNNNTGG	1 cut(s)	403
XspI	CTAG	6 cut(s)	125, 825, 933, 959, 971, 1259
ZrmI	AGTACT	1 cut(s)	685
Zsp2I	ATGCAT	1 cut(s)	1079

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.