Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0011261

Physical Location & Seq

Genomic Coordinates Reverse (-)

4323580 .. 4328720

Gene Structure 5141 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g03800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1899 bp

ATGAACCCAAAAAAATCCAACCAAACGGCCCACTCGATTTGGGGATCAGATTCAGATACTCAGTGCCCTCTGCGTCTCCGCCTCTTTCTCTCCCGCCCTTGGAAGCTCCGCCCTTCTCCCACAAAATACACCAAATCCTCCCTCTCTATCTCTCTCATTCCATTTCTCATTCATTGCTCTCTCTCTAAAGAGTTGGCGACAATGGAGAGCTTCGCCCTCCACTCTCTCTCCTCCTCCACCTTCCCTCTCTCTTCCCGCGCTTCCTTATTCCGCTGCTCAAAACCCCTCGTCAAATCCCCACCGTCCATCCAATCATTTTCCTCACTCCCCACCCTCCGATCACCATCCCTCTTGCCCTCAAAACCTTTCATCTCCTTGTCTCATTCCTCAAAACCCAGAAAAACCCATTTCCCAATCCAAGCCTCTCAATCCGCACTGCCCCAAACCACTCTTGCACCACCGCCGGCACAGCCGCTTCAAGGCGCCAAACCAATCCCCTTCATCATCTCCATCGCCATAGGCATTGTGGTCCGCTTTTTCGTCCCCAAACCAGTCCAAGTCACCCCACAAGCCTGGCAATTGCTCGCCATTTTCCTATCCACCATTGCTGGCCTGGTTCTGAGCCCGTTACCCGTCGGCGCTTGGGCCTTTCTTGGCCTCACCACCTCCGTTGTGACCGGAACTCTGTCCTTCCCGACGGCCTTCAGTGCTTTTACCAATGAGGTGATCTGGTTGATTGTCATTTCCTTCTTTTTCGCTCGCGGGTTCGTGAAGACGGGCTTGGGGATCGATCGGATTGCAACCTACTTTGTCAAGTGGTTGGGGAAGAGCACACTGGGATTGTCTTATGGGCTGACAATAAGCGAGGCACTAATTGCTCCGGCGATGCCGAGTACCACGGCCAGGGCTGGCGGTGTTTTCTTGCCCATTATCAAGTCGTTGTCCCTCTCCGGCGGGAGTAAACCGGGTGACCCCTCCAAAAGAAAGCTTGGTTCTTATCTGATTATGTCTCAGTTTCAGTCCGCTGGTAATTCTAGTGCTCTTTTCTTAACGGCTGCAGCTCAAAATTTGCTGTGCCTTAAATTAGCTGAGGAACTTGGGGTGATTGTTTCAAGCCCTTGGGTTTCTTGGTTCAAGGCTGCTAGTTTACCAGCATTTGTCTGCCTTCTAGCTACTCCGCTAGTCTTATACAAGCTATTTCCTCCAGAAACCAAAGACACACCTGATGCCCCTGCCATGGCTACAAAGAAATTGGAGAATATGGGTCCCGTCACAAAGAATGAATTCATTATGGTTTGTACAATGCTTCTTGCTGTCTCTTTGTGGGTCTTCGGAGATGCTCTTGGTTTAGCAAGCGTTGTAACTGCAATGATTGGCTTATCTGTACTCCTTTTGTTAGGAGTCCTTGATTGGGATGACTGCTTAAGTGAAAAATCAGCATGGGATACATTGGCTTGGTTTTCTGTTCTAGTCGGTATGGCTGGCCAGTTGACAAATCTTGGTATTGTAAATTGGATGTCTAGTAGTGTAGCCAAGACGCTTCAGTCCTACTCTTTAAGCTGGCCAGCTGCATTTGGCGTTCTTCAGGCAGCTTACTTCTTCATCCATTACCTCTTTGCAAGTCAAACCGGTCATGTGGGTGCTTTATACTCTGCATTTCTTGCCATGAACTTGGCAGCTGGGGTACCTGGTGTTTTGGCAGCGTTGGCTTTAGCTTACAATACAAATCTGTTTGGGGCTTTAACACATTATAGCAGTGGTCAGGCTGCTGTATACTACGGAGCTGGTTATGTTGATCTTCCTGATGTGTTCAAAGTTGGCTTTATAATGGCTCTTGTTAATGCTGTCATCTGGGCAATAGTAGGATCCTTCTGGTGGAAATTTTTGGGCCTCTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003333 GO:0003674 GO:0005215 GO:0005310 GO:0005313 GO:0005326 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006536 GO:0006541 GO:0006807 GO:0006810 GO:0006811 GO:0006820 GO:0006835 GO:0006836 GO:0006855 GO:0006865 GO:0008150 GO:0008152 GO:0008509 GO:0008514 GO:0009064 GO:0009507 GO:0009526 GO:0009534 GO:0009536 GO:0009579 GO:0009605 GO:0009607 GO:0009624 GO:0009941 GO:0009987 GO:0015075 GO:0015131 GO:0015140 GO:0015171 GO:0015172 GO:0015179 GO:0015238 GO:0015318 GO:0015556 GO:0015711 GO:0015729 GO:0015740 GO:0015743 GO:0015800 GO:0015807 GO:0015813 GO:0015849 GO:0015893 GO:0016020 GO:0019676 GO:0019740 GO:0019752 GO:0022857 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0034220 GO:0042221 GO:0042493 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043648 GO:0044237 GO:0044238 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046942 GO:0046943 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0071423 GO:0071702 GO:0071704 GO:0071705 GO:0098656 GO:1901564 GO:1901605 GO:1902356 GO:1902475 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_sulph_symp

Protein Analysis

633

Amino Acids

67.88

Weight (kDa)

9.65

Isoelectric Point (pI)

36.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_sulph_symp	PF00939	167 - 631	2.3e-132	Sodium:sulfate symporter transmembrane region
CitMHS	PF03600	205 - 572	9.9e-15	Citrate transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011261)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64290
fragaria_vesca	FvH4_2g11840 FvH4_2g11840 FvH4_2g11840
malus_domestica	MD05G1045600.v1.1 MD10G1052600.v1.1
prunus_persica	Prupe.8G065200_v2.0.a1
pyrus_communis	pycom05g03800 pycom10g03760
rosa_chinensis	RchiOBHm_Chr6g0271491
rosa_laevigata	RLG00000013737
rosa_multiflora	Rmu_sc0001679.1_g000005
rosa_roxburghii	Rroxscaffold_7G00196990
rosa_rugosa	Rorug06G0061100
rosa_samantha	Rh6AG180300 Rh6BG186900 Rh6CG180100 Rh6DG172000
rosa_wichuraiana	Rw6G015480 Rw6G015590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1826
AasI	GACNNNNNNGTC	1 cut(s)	1543
Acc65I	GGTACC	1 cut(s)	1684
AccB1I	GGYRCC	2 cut(s)	482, 1684
AccI	GTMKAC	1 cut(s)	1773
AccII	CGCG	2 cut(s)	258, 762
AclWI	GGATC	4 cut(s)	52, 794, 1860, 1873
AcoI	YGGCCR	3 cut(s)	900, 1483, 1562
AcsI	RAATTY	3 cut(s)	1066, 1283, 1880
AcuI	CTGAAG	3 cut(s)	688, 1526, 1568
AcyI	GRCGYC	1 cut(s)	483
AfaI	GTAC	4 cut(s)	895, 1300, 1386, 1686
AfiI	CCNNNNNNNGG	6 cut(s)	99, 479, 903, 1237, 1411, 1875
AflII	CTTAAG	1 cut(s)	1423
AgeI	ACCGGT	1 cut(s)	1628
AgsI	TTSAA	4 cut(s)	479, 1113, 1135, 1813
AjnI	CCWGG	4 cut(s)	572, 612, 902, 1687
AjuI	GAANNNNNNNTTGG	2 cut(s)	764, 796
Alw21I	GWGCWC	2 cut(s)	833, 1042
Alw26I	GTCTC	4 cut(s)	80, 384, 1014, 1321
AlwI	GGATC	4 cut(s)	52, 794, 1860, 1873
AoxI	GGCC	9 cut(s)	27, 610, 645, 655, 699, 900, 1483, 1562, 1888
ApeKI	GCWGC	9 cut(s)	273, 1055, 1058, 1139, 1568, 1589, 1676, 1700, 1766
ApoI	RAATTY	3 cut(s)	1066, 1283, 1880
AsiGI	ACCGGT	1 cut(s)	1628
Asp700I	GAANNNNTTC	1 cut(s)	1283
Asp718I	GGTACC	1 cut(s)	1684
AspLEI	GCGC	3 cut(s)	260, 485, 641
AspS9I	GGNCC	5 cut(s)	28, 529, 645, 1265, 1888
AsuC2I	CCSGG	1 cut(s)	966
AsuHPI	GGTGA	6 cut(s)	333, 553, 652, 736, 980, 1114
AvaII	GGWCC	2 cut(s)	529, 1265
BaeGI	GKGCMC	1 cut(s)	68
BalI	TGGCCA	2 cut(s)	1485, 1564
BamHI	GGATCC	1 cut(s)	1865
BanI	GGYRCC	2 cut(s)	482, 1684
BanII	GRGCYC	1 cut(s)	626
BbsI	GAAGAC	2 cut(s)	779, 1321
Bbv12I	GWGCWC	2 cut(s)	833, 1042
BbvCI	CCTCAGC	1 cut(s)	1089
BbvI	GCAGC	9 cut(s)	260, 1042, 1070, 1126, 1555, 1601, 1688, 1712, 1753
BccI	CCATC	3 cut(s)	314, 352, 518
BceAI	ACGGC	4 cut(s)	42, 714, 915, 1068
BcgI	CGANNNNNNTGC	2 cut(s)	779, 813
BciT130I	CCWGG	4 cut(s)	574, 614, 904, 1689
BciVI	GTATCC	1 cut(s)	1438
BcnI	CCSGG	1 cut(s)	966
BcoDI	GTCTC	4 cut(s)	80, 384, 1014, 1321
BfaI	CTAG	6 cut(s)	1035, 1143, 1169, 1181, 1469, 1521
BfmI	CTRYAG	1 cut(s)	1056
BfoI	RGCGCY	2 cut(s)	486, 642
BfrI	CTTAAG	1 cut(s)	1423
BfuI	GTATCC	1 cut(s)	1438
Bme1390I	CCNGG	5 cut(s)	574, 614, 904, 966, 1689
Bme18I	GGWCC	2 cut(s)	529, 1265
BmgT120I	GGNCC	5 cut(s)	28, 529, 645, 1265, 1888
BmiI	GGNNCC	5 cut(s)	484, 1266, 1267, 1686, 1867
BmrFI	CCNGG	5 cut(s)	574, 614, 904, 966, 1689
BmrI	ACTGGG	1 cut(s)	845
BmsI	GCATC	3 cut(s)	876, 1216, 1327
BmuI	ACTGGG	1 cut(s)	845
BpiI	GAAGAC	2 cut(s)	779, 1321
BpmI	CTGGAG	1 cut(s)	1188
Bpu10I	CCTNAGC	1 cut(s)	1089
BpuMI	CCSGG	1 cut(s)	966
Bsa29I	ATCGAT	1 cut(s)	789
BsaBI	GATNNNNATC	1 cut(s)	343
BsaHI	GRCGYC	1 cut(s)	483
BsaJI	CCNNGG	5 cut(s)	98, 897, 903, 1118, 1236
BsaWI	WCCGGW	2 cut(s)	677, 1628
BsaXI	ACNNNNNCTCC	2 cut(s)	212, 242
Bsc4I	CCNNNNNNNGG	6 cut(s)	99, 479, 903, 1237, 1411, 1875
Bse118I	RCCGGY	2 cut(s)	463, 1628
Bse1I	ACTGG	3 cut(s)	551, 840, 1486
Bse3DI	GCAATG	3 cut(s)	172, 603, 1374
Bse8I	GATNNNNATC	1 cut(s)	343
BseBI	CCWGG	4 cut(s)	574, 614, 904, 1689
BseCI	ATCGAT	1 cut(s)	789
BseDI	CCNNGG	5 cut(s)	98, 897, 903, 1118, 1236
BseGI	GGATG	5 cut(s)	306, 344, 1420, 1521, 1602
BseJI	GATNNNNATC	1 cut(s)	343
BseLI	CCNNNNNNNGG	6 cut(s)	99, 479, 903, 1237, 1411, 1875
BseMI	GCAATG	3 cut(s)	172, 603, 1374
BseMII	CTCAG	4 cut(s)	74, 611, 1025, 1080
BseNI	ACTGG	3 cut(s)	551, 840, 1486
BseRI	GAGGAG	2 cut(s)	220, 223
BseSI	GKGCMC	1 cut(s)	68
BseXI	GCAGC	9 cut(s)	260, 1042, 1070, 1126, 1555, 1601, 1688, 1712, 1753
BseYI	CCCAGC	1 cut(s)	1679
Bsh1236I	CGCG	2 cut(s)	258, 762
Bsh1285I	CGRYCG	1 cut(s)	793
BshFI	GGCC	9 cut(s)	29, 612, 647, 657, 701, 902, 1485, 1564, 1890
BshNI	GGYRCC	2 cut(s)	482, 1684
BshTI	ACCGGT	1 cut(s)	1628
BshVI	ATCGAT	1 cut(s)	789
BsiEI	CGRYCG	1 cut(s)	793
BsiHKAI	GWGCWC	2 cut(s)	833, 1042
BsiSI	CCGG	6 cut(s)	464, 678, 881, 951, 965, 1629
BslFI	GGGAC	3 cut(s)	527, 928, 1251
BslI	CCNNNNNNNGG	6 cut(s)	99, 479, 903, 1237, 1411, 1875
BsmAI	GTCTC	4 cut(s)	80, 384, 1014, 1321
BsmBI	CGTCTC	1 cut(s)	80
BsmFI	GGGAC	3 cut(s)	527, 928, 1251
BsnI	GGCC	9 cut(s)	29, 612, 647, 657, 701, 902, 1485, 1564, 1890
Bsp1286I	GDGCHC	4 cut(s)	68, 626, 833, 1042
Bsp1407I	TGTACA	1 cut(s)	1298
Bsp143I	GATC	7 cut(s)	44, 338, 726, 786, 790, 1795, 1865
Bsp19I	CCATGG	1 cut(s)	1236
BspANI	GGCC	9 cut(s)	29, 612, 647, 657, 701, 902, 1485, 1564, 1890
BspCNI	CTCAG	4 cut(s)	73, 612, 1024, 1081
BspDI	ATCGAT	1 cut(s)	789
BspFNI	CGCG	2 cut(s)	258, 762
BspLI	GGNNCC	5 cut(s)	484, 1266, 1267, 1686, 1867
BspMAI	CTGCAG	1 cut(s)	1060
BspPI	GGATC	4 cut(s)	52, 794, 1860, 1873
BspQI	GCTCTTC	1 cut(s)	821
BspT107I	GGYRCC	2 cut(s)	482, 1684
BspTI	CTTAAG	1 cut(s)	1423
BsrDI	GCAATG	3 cut(s)	172, 603, 1374
BsrFI	RCCGGY	2 cut(s)	463, 1628
BsrGI	TGTACA	1 cut(s)	1298
BsrI	ACTGG	3 cut(s)	551, 840, 1486
BssAI	RCCGGY	2 cut(s)	463, 1628
BssECI	CCNNGG	5 cut(s)	98, 897, 903, 1118, 1236
BssMI	GATC	7 cut(s)	44, 338, 726, 786, 790, 1795, 1865
BssNAI	GTATAC	1 cut(s)	1774
BssNI	GRCGYC	1 cut(s)	483
BssT1I	CCWWGG	3 cut(s)	98, 1118, 1236
Bst1107I	GTATAC	1 cut(s)	1774
Bst2UI	CCWGG	4 cut(s)	574, 614, 904, 1689
Bst4CI	ACNGT	1 cut(s)	303
Bst6I	CTCTTC	2 cut(s)	256, 821
BstACI	GRCGYC	1 cut(s)	483
BstAFI	CTTAAG	1 cut(s)	1423
BstAPI	GCANNNNNTGC	2 cut(s)	875, 1661
BstAUI	TGTACA	1 cut(s)	1298
BstC8I	GCNNGC	9 cut(s)	465, 585, 610, 760, 910, 1354, 1483, 1562, 1566
BstDEI	CTNAG	4 cut(s)	60, 620, 1011, 1089
BstDSI	CCRYGG	2 cut(s)	897, 1236
BstEII	GGTNACC	1 cut(s)	968
BstF5I	GGATG	5 cut(s)	306, 344, 1420, 1521, 1602
BstFNI	CGCG	2 cut(s)	258, 762
BstH2I	RGCGCY	2 cut(s)	486, 642
BstHHI	GCGC	3 cut(s)	260, 485, 641
BstKTI	GATC	7 cut(s)	47, 341, 729, 789, 793, 1798, 1868
BstMAI	GTCTC	4 cut(s)	80, 384, 1014, 1321
BstMBI	GATC	7 cut(s)	44, 338, 726, 786, 790, 1795, 1865
BstMCI	CGRYCG	1 cut(s)	793
BstMWI	GCNNNNNNNGC	5 cut(s)	469, 707, 875, 1661, 1706
BstNI	CCWGG	4 cut(s)	574, 614, 904, 1689
BstPI	GGTNACC	1 cut(s)	968
BstSCI	CCNGG	5 cut(s)	572, 612, 902, 964, 1687
BstSFI	CTRYAG	1 cut(s)	1056
BstSLI	GKGCMC	1 cut(s)	68
BstUI	CGCG	2 cut(s)	258, 762
BstV1I	GCAGC	9 cut(s)	260, 1042, 1070, 1126, 1555, 1601, 1688, 1712, 1753
BstV2I	GAAGAC	2 cut(s)	779, 1321
BstX2I	RGATCY	1 cut(s)	1865
BstXI	CCANNNNNNTGG	2 cut(s)	573, 1672
BstYI	RGATCY	1 cut(s)	1865
BstZ17I	GTATAC	1 cut(s)	1774
Bsu15I	ATCGAT	1 cut(s)	789
BsuI	GTATCC	1 cut(s)	1438
BsuRI	GGCC	9 cut(s)	29, 612, 647, 657, 701, 902, 1485, 1564, 1890
BsuTUI	ATCGAT	1 cut(s)	789
BtgI	CCRYGG	2 cut(s)	897, 1236
BtgZI	GCGATG	2 cut(s)	496, 899
BtsCI	GGATG	5 cut(s)	306, 344, 1420, 1521, 1602
BtsI	GCAGTG	2 cut(s)	434, 1762
BtsIMutI	CAGTG	5 cut(s)	68, 434, 712, 833, 1762
Cac8I	GCNNGC	9 cut(s)	465, 585, 610, 760, 910, 1354, 1483, 1562, 1566
CfoI	GCGC	3 cut(s)	260, 485, 641
Cfr10I	RCCGGY	2 cut(s)	463, 1628
Cfr13I	GGNCC	5 cut(s)	28, 529, 645, 1265, 1888
ClaI	ATCGAT	1 cut(s)	789
CseI	GACGC	2 cut(s)	62, 1546
CsiI	ACCWGGT	1 cut(s)	1687
Csp6I	GTAC	4 cut(s)	894, 1299, 1385, 1685
CspAI	ACCGGT	1 cut(s)	1628
CspCI	CAANNNNNGTGG	4 cut(s)	20, 55, 652, 687
CviAII	CATG	4 cut(s)	1237, 1440, 1634, 1666
CviQI	GTAC	4 cut(s)	894, 1299, 1385, 1685
DdeI	CTNAG	4 cut(s)	60, 620, 1011, 1089
DinI	GGCGCC	1 cut(s)	484
DpnI	GATC	7 cut(s)	46, 340, 728, 788, 792, 1797, 1867
DpnII	GATC	7 cut(s)	44, 338, 726, 786, 790, 1795, 1865
DrdI	GACNNNNNNGTC	1 cut(s)	1543
DseDI	GACNNNNNNGTC	1 cut(s)	1543
EaeI	YGGCCR	3 cut(s)	900, 1483, 1562
Eam1104I	CTCTTC	2 cut(s)	256, 821
EarI	CTCTTC	2 cut(s)	256, 821
EciI	GGCGGA	2 cut(s)	68, 98
Eco130I	CCWWGG	3 cut(s)	98, 1118, 1236
Eco24I	GRGCYC	1 cut(s)	626
Eco47I	GGWCC	2 cut(s)	529, 1265
Eco57I	CTGAAG	3 cut(s)	688, 1526, 1568
Eco91I	GGTNACC	1 cut(s)	968
EcoO109I	RGGNCCY	1 cut(s)	1265
EcoO65I	GGTNACC	1 cut(s)	968
EcoRI	GAATTC	1 cut(s)	1283
EcoRII	CCWGG	4 cut(s)	572, 612, 902, 1687
EcoT14I	CCWWGG	3 cut(s)	98, 1118, 1236
EcoT38I	GRGCYC	1 cut(s)	626
EgeI	GGCGCC	1 cut(s)	484
EheI	GGCGCC	1 cut(s)	484
ErhI	CCWWGG	3 cut(s)	98, 1118, 1236
Esp3I	CGTCTC	1 cut(s)	80
FaeI	CATG	4 cut(s)	1240, 1443, 1637, 1669
FalI	AAGNNNNNCTT	2 cut(s)	764, 796
FaqI	GGGAC	3 cut(s)	527, 928, 1251
FatI	CATG	4 cut(s)	1236, 1439, 1633, 1665
FauI	CCCGC	4 cut(s)	101, 263, 755, 947
FblI	GTMKAC	1 cut(s)	1773
FokI	GGATG	5 cut(s)	293, 331, 1427, 1528, 1589
FriOI	GRGCYC	1 cut(s)	626
FspBI	CTAG	6 cut(s)	1035, 1143, 1169, 1181, 1469, 1521
GlaI	GCGC	3 cut(s)	259, 484, 640
GsaI	CCCAGC	1 cut(s)	1683
GsuI	CTGGAG	1 cut(s)	1188
HaeII	RGCGCY	2 cut(s)	486, 642
HaeIII	GGCC	9 cut(s)	29, 612, 647, 657, 701, 902, 1485, 1564, 1890
HapII	CCGG	6 cut(s)	464, 678, 881, 951, 965, 1629
HgaI	GACGC	2 cut(s)	62, 1546
HhaI	GCGC	3 cut(s)	260, 485, 641
Hin1I	GRCGYC	1 cut(s)	483
Hin1II	CATG	4 cut(s)	1240, 1443, 1637, 1669
Hin6I	GCGC	3 cut(s)	258, 483, 639
HinP1I	GCGC	3 cut(s)	258, 483, 639
HincII	GTYRAC	1 cut(s)	1491
HindII	GTYRAC	1 cut(s)	1491
HindIII	AAGCTT	1 cut(s)	986
HinfI	GANTC	2 cut(s)	50, 1401
HpaII	CCGG	6 cut(s)	464, 678, 881, 951, 965, 1629
HphI	GGTGA	6 cut(s)	333, 553, 652, 736, 980, 1114
Hpy166II	GTNNAC	4 cut(s)	962, 1148, 1491, 1774
Hpy188I	TCNGA	7 cut(s)	49, 55, 338, 621, 795, 1002, 1334
Hpy188III	TCNNGA	4 cut(s)	694, 769, 1205, 1802
Hpy8I	GTNNAC	4 cut(s)	962, 1148, 1491, 1774
Hpy99I	CGWCG	2 cut(s)	638, 700
HpyAV	CCTTC	8 cut(s)	123, 250, 508, 700, 712, 757, 1175, 1879
HpyCH4III	ACNGT	1 cut(s)	303
HpyCH4V	TGCA	7 cut(s)	455, 800, 1058, 1367, 1571, 1619, 1655
HpyF10VI	GCNNNNNNNGC	5 cut(s)	469, 707, 875, 1661, 1706
HpyF3I	CTNAG	4 cut(s)	60, 620, 1011, 1089
Hsp92I	GRCGYC	1 cut(s)	483
Hsp92II	CATG	4 cut(s)	1240, 1443, 1637, 1669
HspAI	GCGC	3 cut(s)	258, 483, 639
KasI	GGCGCC	1 cut(s)	482
KflI	GGGWCCC	1 cut(s)	1265
KpnI	GGTACC	1 cut(s)	1688
KroI	GCCGGC	1 cut(s)	463
KroNI	GCCGGC	1 cut(s)	465
Kzo9I	GATC	7 cut(s)	44, 338, 726, 786, 790, 1795, 1865
LguI	GCTCTTC	1 cut(s)	821
LmnI	GCTCC	3 cut(s)	111, 883, 1781
Lsp1109I	GCAGC	9 cut(s)	260, 1042, 1070, 1126, 1555, 1601, 1688, 1712, 1753
LweI	GCATC	3 cut(s)	876, 1216, 1327
MabI	ACCWGGT	1 cut(s)	1687
MaeI	CTAG	6 cut(s)	1035, 1143, 1169, 1181, 1469, 1521
MaeIII	GTNAC	6 cut(s)	559, 627, 673, 968, 1270, 1360
MalI	GATC	7 cut(s)	46, 340, 728, 788, 792, 1797, 1867
MboI	GATC	7 cut(s)	44, 338, 726, 786, 790, 1795, 1865
MboII	GAAGA	7 cut(s)	243, 784, 838, 1321, 1574, 1591, 1790
MfeI	CAATTG	1 cut(s)	578
MflI	RGATCY	1 cut(s)	1865
MhlI	GDGCHC	4 cut(s)	68, 626, 833, 1042
MlsI	TGGCCA	2 cut(s)	1485, 1564
MluCI	AATT	9 cut(s)	578, 873, 1030, 1066, 1082, 1250, 1283, 1510, 1880
MluNI	TGGCCA	2 cut(s)	1485, 1564
Mly113I	GGCGCC	1 cut(s)	483
MlyI	GAGTC	1 cut(s)	1410
MmeI	TCCRAC	1 cut(s)	42
Mox20I	TGGCCA	2 cut(s)	1485, 1564
MroNI	GCCGGC	1 cut(s)	463
MroXI	GAANNNNTTC	1 cut(s)	1283
MscI	TGGCCA	2 cut(s)	1485, 1564
MseI	TTAA	6 cut(s)	1049, 1080, 1424, 1556, 1742, 1839
MslI	CAYNNNNRTG	1 cut(s)	1638
Msp20I	TGGCCA	2 cut(s)	1485, 1564
MspA1I	CMGCKG	4 cut(s)	273, 1025, 1568, 1679
MspCI	CTTAAG	1 cut(s)	1423
MspI	CCGG	6 cut(s)	464, 678, 881, 951, 965, 1629
MspR9I	CCNGG	5 cut(s)	574, 614, 904, 966, 1689
MunI	CAATTG	1 cut(s)	578
MvaI	CCWGG	4 cut(s)	574, 614, 904, 1689
MvnI	CGCG	2 cut(s)	258, 762
MwoI	GCNNNNNNNGC	5 cut(s)	469, 707, 875, 1661, 1706
NaeI	GCCGGC	1 cut(s)	465
NarI	GGCGCC	1 cut(s)	483
NciI	CCSGG	1 cut(s)	966
NcoI	CCATGG	1 cut(s)	1236
NdeII	GATC	7 cut(s)	44, 338, 726, 786, 790, 1795, 1865
NgoMIV	GCCGGC	1 cut(s)	463
NlaIII	CATG	4 cut(s)	1240, 1443, 1637, 1669
NlaIV	GGNNCC	5 cut(s)	484, 1266, 1267, 1686, 1867
NmeAIII	GCCGAG	1 cut(s)	915
NmuCI	GTSAC	4 cut(s)	559, 673, 968, 1270
PciSI	GCTCTTC	1 cut(s)	821
PcsI	WCGNNNNNNNCGW	1 cut(s)	32
PdiI	GCCGGC	1 cut(s)	465
PdmI	GAANNNNTTC	1 cut(s)	1283
PfeI	GAWTC	1 cut(s)	50
PinAI	ACCGGT	1 cut(s)	1628
Ple19I	CGATCG	1 cut(s)	793
PleI	GAGTC	1 cut(s)	1409
PluTI	GGCGCC	1 cut(s)	486
PpsI	GAGTC	1 cut(s)	1409
PpuMI	RGGWCCY	1 cut(s)	1265
PsiI	TTATAA	1 cut(s)	1826
Psp5II	RGGWCCY	1 cut(s)	1265
Psp6I	CCWGG	4 cut(s)	572, 612, 902, 1687
PspEI	GGTNACC	1 cut(s)	968
PspFI	CCCAGC	1 cut(s)	1679
PspGI	CCWGG	4 cut(s)	572, 612, 902, 1687
PspN4I	GGNNCC	5 cut(s)	484, 1266, 1267, 1686, 1867
PspPI	GGNCC	5 cut(s)	28, 529, 645, 1265, 1888
PspPPI	RGGWCCY	1 cut(s)	1265
PstI	CTGCAG	1 cut(s)	1060
PsuI	RGATCY	1 cut(s)	1865
PvuI	CGATCG	1 cut(s)	793
PvuII	CAGCTG	2 cut(s)	1568, 1679
RsaI	GTAC	4 cut(s)	895, 1300, 1386, 1686
RsaNI	GTAC	4 cut(s)	894, 1299, 1385, 1685
RseI	CAYNNNNRTG	1 cut(s)	1638
SapI	GCTCTTC	1 cut(s)	821
SaqAI	TTAA	6 cut(s)	1049, 1080, 1424, 1556, 1742, 1839
Sau3AI	GATC	7 cut(s)	44, 338, 726, 786, 790, 1795, 1865
Sau96I	GGNCC	5 cut(s)	28, 529, 645, 1265, 1888
SchI	GAGTC	1 cut(s)	1410
ScrFI	CCNGG	5 cut(s)	574, 614, 904, 966, 1689
SduI	GDGCHC	4 cut(s)	68, 626, 833, 1042
SexAI	ACCWGGT	1 cut(s)	1687
SfaNI	GCATC	3 cut(s)	876, 1216, 1327
SfcI	CTRYAG	1 cut(s)	1056
SfoI	GGCGCC	1 cut(s)	484
SinI	GGWCC	2 cut(s)	529, 1265
SmiMI	CAYNNNNRTG	1 cut(s)	1638
SmlI	CTYRAG	1 cut(s)	1423
SmoI	CTYRAG	1 cut(s)	1423
Sse9I	AATT	9 cut(s)	578, 873, 1030, 1066, 1082, 1250, 1283, 1510, 1880
SspDI	GGCGCC	1 cut(s)	482
SspMI	CTAG	6 cut(s)	1035, 1143, 1169, 1181, 1469, 1521
StyD4I	CCNGG	5 cut(s)	572, 612, 902, 964, 1687
StyI	CCWWGG	3 cut(s)	98, 1118, 1236
TaaI	ACNGT	1 cut(s)	303
TaqI	TCGA	2 cut(s)	35, 789
TasI	AATT	9 cut(s)	578, 873, 1030, 1066, 1082, 1250, 1283, 1510, 1880
TatI	WGTACW	2 cut(s)	1298, 1384
TauI	GCSGC	1 cut(s)	475
TfiI	GAWTC	1 cut(s)	50
Tru1I	TTAA	6 cut(s)	1049, 1080, 1424, 1556, 1742, 1839
Tru9I	TTAA	6 cut(s)	1049, 1080, 1424, 1556, 1742, 1839
TscAI	CASTG	5 cut(s)	68, 441, 712, 840, 1762
TseFI	GTSAC	4 cut(s)	559, 673, 968, 1270
TseI	GCWGC	9 cut(s)	273, 1055, 1058, 1139, 1568, 1589, 1676, 1700, 1766
Tsp45I	GTSAC	4 cut(s)	559, 673, 968, 1270
TspDTI	ATGAA	8 cut(s)	17, 161, 358, 490, 1276, 1296, 1591, 1682
TspGWI	ACGGA	2 cut(s)	658, 1794
TspRI	CASTG	5 cut(s)	68, 441, 712, 840, 1762
Vha464I	CTTAAG	1 cut(s)	1423
VpaK11BI	GGWCC	2 cut(s)	529, 1265
XapI	RAATTY	3 cut(s)	1066, 1283, 1880
XcmI	CCANNNNNNNNNTGG	2 cut(s)	523, 610
XmiI	GTMKAC	1 cut(s)	1773
XmnI	GAANNNNTTC	1 cut(s)	1283
XspI	CTAG	6 cut(s)	1035, 1143, 1169, 1181, 1469, 1521

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.