Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0011261

Physical Location & Seq

Genomic Coordinates Reverse (-)

40679964 .. 40683946

Gene Structure 3983 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00196990.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1692 bp

ATGGAGAGCTTCGCCCTCCACTCTCTCTCCACCTCGTCCTTGTCCCTTTCTGCCCGCGCTTCCTTAGTCCGCCGCCGCTCAAAACCGATCCTCAGATCCCCGCCGTCCATCTCCCGCAACAACCCCCTAGCATCTCACTCCCTCCGATCACCCATTCTCTTCGCCTCAAAGCCCGTAACATCCTTCTCTCCTTTACCAAATAACAAGACCCATTTCCCAATTCAAGCCTCCCAATCTCCTCAATCCCAAACCAGCCTCACACCGCCTCCGCCTCAAGGCGCCAAAATCGTCCCCTTCATCATCTCCATCGCCATAGGCCTAGTTGTCCGCTTCTTGGTCCCTAAACCCGTCGAAGTGACCCCACAAGCCTGGCAATTGCTCTCCATCTTCCTCTCCACCATCGCCGGCCTGGTTCTCAGCCCGCTGCCCGTCGGCGCTTGGGCTTTTCTGGGCCTCACAACCTCCATAGTCTCCGGAACTCTGACATTTCCGGCGGCCTTCAGTGCTTTTACTAACGAAGTAATATGGTTGATTGTGATTTCCTTCTTTTTCGCTCGTGGATTCGTCAAGACGGGTTTGGGTGATCGCATTGCGACCTACTTTGTCAAGTGGTTGGGGAAGAGCACTCTGGGGTTGTCTTATGGGTTGACCCTTAGCGAGGCCCTTATTGCCCCGGCAATGCCCAGTACTACCGCCAGGGCTGGCGGTGTCTTCTTGCCCATTATTAAGTCATTGTCACTCTCTGCTGGGAGTAAACCTGGTGACGCCTCCAAATCAAAGCTTGGTTCTTATCTCATTATGTCTCAGTTTCAGTCCGCTGGTAACTCTAGTGCTCTTTTCTTAACGGCTGCAGCTCAAAATCTGCTGTGCCTTAAATTAGCAGAGGAACTTGGGGTGATAATTTCAAGCCCTTGGGTTTCTTGGTTCAAGGCTGCTAGCTTACCAGCACTTGTTTCACTACTAGCTACTCCGCTAGTCTTATACAAGCTTTATCCTCCTGAAACCAAGGACACACCTGATGCCCCTGCCATGGCTACAAAAAAACTGGAGAGTATGGGCCCTGTCACAAAAAACGAATGCATTATGGTTGGTACAATGCTTCTTGCTGTTACTCTATGGGTCTGTGGAGAGGCTCTTGGTATAGCAAGTGTTGTAGCGGCAATGATTGGCTTATCTATACTTCTTTCGTTAGGCGTCCTTGATTGGGATGACTGCTTAAGTGAAAAATCAGCATGGGATACTTTGGCTTGGTTTGCTGTTCTAGTGGGTATGGCCGGCCAGTTGACAAACCTTGGTATTGTTAGCTGGATGTCTAATTGTGTAGCAAAGATCCTACAGTCTTACTCCTTGAGCTGGCCAGCTGCGTTTGGTTTTCTTCAGGCGGCTTACTTCTGCATCCACTACCTCTTTGCAAGTCAAACTGGTCATGTGGGAGCTTTATACTCTGCATTTCTTGCCATGAACTTGGCAGCTGGGGTACCTGGTATATTGGCAGCATTGGCTTTAGCTTACAACACAAATCTTTTTGGGGCTTTAACACATTATAGCAGTGGTCAGGCTGCTGTGTACTATGGAGCTGGTTATGTTGATCTTCCTGATGTGTTTAAAGTCGGCTTTATCATGGCTTTTGTTAATGCTGTCATCTGGACATTAGTAGGGTTGTTCTGGTGGAAATTTTTGGGCCTCTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003333 GO:0003674 GO:0005215 GO:0005310 GO:0005313 GO:0005326 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006536 GO:0006541 GO:0006807 GO:0006810 GO:0006811 GO:0006820 GO:0006835 GO:0006836 GO:0006855 GO:0006865 GO:0008150 GO:0008152 GO:0008509 GO:0008514 GO:0009064 GO:0009507 GO:0009526 GO:0009534 GO:0009536 GO:0009579 GO:0009605 GO:0009607 GO:0009624 GO:0009941 GO:0009987 GO:0015075 GO:0015131 GO:0015140 GO:0015171 GO:0015172 GO:0015179 GO:0015238 GO:0015318 GO:0015556 GO:0015711 GO:0015729 GO:0015740 GO:0015743 GO:0015800 GO:0015807 GO:0015813 GO:0015849 GO:0015893 GO:0016020 GO:0019676 GO:0019740 GO:0019752 GO:0022857 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0034220 GO:0042221 GO:0042493 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043648 GO:0044237 GO:0044238 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046942 GO:0046943 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0071423 GO:0071702 GO:0071704 GO:0071705 GO:0098656 GO:1901564 GO:1901605 GO:1902356 GO:1902475 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_sulph_symp

Protein Analysis

563

Amino Acids

59.93

Weight (kDa)

9.4

Isoelectric Point (pI)

39.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_sulph_symp	PF00939	95 - 562	6.6e-132	Sodium:sulfate symporter transmembrane region
CitMHS	PF03600	137 - 502	1.2e-15	Citrate transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011261)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64290
fragaria_vesca	FvH4_2g11840 FvH4_2g11840 FvH4_2g11840
malus_domestica	MD05G1045600.v1.1 MD10G1052600.v1.1
prunus_persica	Prupe.8G065200_v2.0.a1
pyrus_communis	pycom05g03800 pycom10g03760
rosa_chinensis	RchiOBHm_Chr6g0271491
rosa_laevigata	RLG00000013737
rosa_multiflora	Rmu_sc0001679.1_g000005
rosa_roxburghii	Rroxscaffold_7G00196990
rosa_rugosa	Rorug06G0061100
rosa_samantha	Rh6AG180300 Rh6BG186900 Rh6CG180100 Rh6DG172000
rosa_wichuraiana	Rw6G015480 Rw6G015590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1477
AccB1I	GGYRCC	2 cut(s)	278, 1477
AccBSI	CCGCTC	1 cut(s)	78
AccII	CGCG	1 cut(s)	57
AccIII	TCCGGA	1 cut(s)	473
AclWI	GGATC	3 cut(s)	82, 90, 1324
AcoI	YGGCCR	3 cut(s)	1272, 1276, 1355
AcsI	RAATTY	1 cut(s)	1673
AcuI	CTGAAG	2 cut(s)	484, 1361
AcyI	GRCGYC	3 cut(s)	279, 765, 1194
AfaI	GTAC	4 cut(s)	688, 1093, 1479, 1568
AfiI	CCNNNNNNNGG	6 cut(s)	275, 334, 658, 1030, 1204, 1353
AflII	CTTAAG	1 cut(s)	1216
AgsI	TTSAA	3 cut(s)	224, 906, 928
AjnI	CCWGG	5 cut(s)	368, 408, 695, 757, 1480
Alw21I	GWGCWC	2 cut(s)	626, 835
Alw26I	GTCTC	2 cut(s)	475, 807
AlwI	GGATC	3 cut(s)	82, 90, 1324
Aor13HI	TCCGGA	1 cut(s)	473
ApaI	GGGCCC	1 cut(s)	1061
ApeKI	GCWGC	8 cut(s)	424, 848, 851, 932, 1361, 1469, 1493, 1559
ApoI	RAATTY	1 cut(s)	1673
Asp718I	GGTACC	1 cut(s)	1477
AspLEI	GCGC	3 cut(s)	59, 281, 437
AspS9I	GGNCC	6 cut(s)	337, 451, 661, 1057, 1058, 1681
AsuC2I	CCSGG	1 cut(s)	674
AsuHPI	GGTGA	4 cut(s)	141, 593, 773, 907
AsuNHI	GCTAGC	1 cut(s)	935
AvaII	GGWCC	1 cut(s)	337
BaeGI	GKGCMC	1 cut(s)	1061
BalI	TGGCCA	1 cut(s)	1357
BanI	GGYRCC	2 cut(s)	278, 1477
BanII	GRGCYC	1 cut(s)	1061
BauI	CACGAG	1 cut(s)	555
BbsI	GAAGAC	1 cut(s)	703
Bbv12I	GWGCWC	2 cut(s)	626, 835
BbvI	GCAGC	8 cut(s)	411, 835, 863, 919, 1348, 1481, 1505, 1546
BccI	CCATC	4 cut(s)	116, 314, 392, 407
BceAI	ACGGC	2 cut(s)	88, 861
BciT130I	CCWGG	5 cut(s)	370, 410, 697, 759, 1482
BciVI	GTATCC	1 cut(s)	1231
BcnI	CCSGG	1 cut(s)	674
BcoDI	GTCTC	2 cut(s)	475, 807
BfaI	CTAG	7 cut(s)	128, 320, 828, 936, 962, 974, 1262
BfmI	CTRYAG	2 cut(s)	849, 1334
BfoI	RGCGCY	2 cut(s)	282, 438
BfrI	CTTAAG	1 cut(s)	1216
BfuI	GTATCC	1 cut(s)	1231
BmcAI	AGTACT	1 cut(s)	688
Bme1390I	CCNGG	6 cut(s)	370, 410, 674, 697, 759, 1482
Bme18I	GGWCC	1 cut(s)	337
BmgT120I	GGNCC	6 cut(s)	337, 451, 661, 1057, 1058, 1681
BmiI	GGNNCC	4 cut(s)	280, 339, 1059, 1479
BmrFI	CCNGG	6 cut(s)	370, 410, 674, 697, 759, 1482
BmrI	ACTGGG	1 cut(s)	678
BmsI	GCATC	3 cut(s)	140, 1009, 1404
BmtI	GCTAGC	1 cut(s)	939
BmuI	ACTGGG	1 cut(s)	678
BpiI	GAAGAC	1 cut(s)	703
BpmI	CTGGAG	1 cut(s)	1067
Bpu10I	CCTNAGC	1 cut(s)	653
BpuEI	CTTGAG	2 cut(s)	258, 1369
BpuMI	CCSGG	1 cut(s)	674
BsaHI	GRCGYC	3 cut(s)	279, 765, 1194
BsaJI	CCNNGG	6 cut(s)	672, 696, 911, 1005, 1029, 1291
BsaWI	WCCGGW	1 cut(s)	473
BsaXI	ACNNNNNCTCC	4 cut(s)	11, 41, 250, 280
Bsc4I	CCNNNNNNNGG	6 cut(s)	275, 334, 658, 1030, 1204, 1353
Bse118I	RCCGGY	2 cut(s)	404, 1274
Bse1I	ACTGG	4 cut(s)	684, 1050, 1279, 1426
Bse3DI	GCAATG	3 cut(s)	588, 684, 1167
BseAI	TCCGGA	1 cut(s)	473
BseBI	CCWGG	5 cut(s)	370, 410, 697, 759, 1482
BseDI	CCNNGG	6 cut(s)	672, 696, 911, 1005, 1029, 1291
BseGI	GGATG	4 cut(s)	179, 1213, 1314, 1395
BseLI	CCNNNNNNNGG	6 cut(s)	275, 334, 658, 1030, 1204, 1353
BseMI	GCAATG	3 cut(s)	588, 684, 1167
BseMII	CTCAG	3 cut(s)	106, 430, 818
BseNI	ACTGG	4 cut(s)	684, 1050, 1279, 1426
BseRI	GAGGAG	1 cut(s)	228
BseSI	GKGCMC	1 cut(s)	1061
BseXI	GCAGC	8 cut(s)	411, 835, 863, 919, 1348, 1481, 1505, 1546
BseYI	CCCAGC	2 cut(s)	746, 1472
Bsh1236I	CGCG	1 cut(s)	57
BshNI	GGYRCC	2 cut(s)	278, 1477
BsiHKAI	GWGCWC	2 cut(s)	626, 835
BsiSI	CCGG	5 cut(s)	405, 474, 491, 674, 1275
BslFI	GGGAC	3 cut(s)	28, 275, 323
BslI	CCNNNNNNNGG	6 cut(s)	275, 334, 658, 1030, 1204, 1353
BsmAI	GTCTC	2 cut(s)	475, 807
BsmFI	GGGAC	3 cut(s)	28, 275, 323
BsmI	GAATGC	1 cut(s)	1082
Bsp120I	GGGCCC	1 cut(s)	1057
Bsp1286I	GDGCHC	3 cut(s)	626, 835, 1061
Bsp13I	TCCGGA	1 cut(s)	473
Bsp143I	GATC	6 cut(s)	87, 95, 146, 583, 1329, 1588
Bsp19I	CCATGG	1 cut(s)	1029
BspCNI	CTCAG	3 cut(s)	105, 429, 817
BspEI	TCCGGA	1 cut(s)	473
BspFNI	CGCG	1 cut(s)	57
BspLI	GGNNCC	4 cut(s)	280, 339, 1059, 1479
BspMAI	CTGCAG	1 cut(s)	853
BspOI	GCTAGC	1 cut(s)	939
BspPI	GGATC	3 cut(s)	82, 90, 1324
BspQI	GCTCTTC	1 cut(s)	614
BspT107I	GGYRCC	2 cut(s)	278, 1477
BspTI	CTTAAG	1 cut(s)	1216
BsrBI	CCGCTC	1 cut(s)	78
BsrDI	GCAATG	3 cut(s)	588, 684, 1167
BsrFI	RCCGGY	2 cut(s)	404, 1274
BsrI	ACTGG	4 cut(s)	684, 1050, 1279, 1426
BssAI	RCCGGY	2 cut(s)	404, 1274
BssECI	CCNNGG	6 cut(s)	672, 696, 911, 1005, 1029, 1291
BssMI	GATC	6 cut(s)	87, 95, 146, 583, 1329, 1588
BssNI	GRCGYC	3 cut(s)	279, 765, 1194
BssSI	CACGAG	1 cut(s)	555
BssT1I	CCWWGG	4 cut(s)	911, 1005, 1029, 1291
Bst2BI	CACGAG	1 cut(s)	555
Bst2UI	CCWGG	5 cut(s)	370, 410, 697, 759, 1482
Bst4CI	ACNGT	1 cut(s)	1338
Bst6I	CTCTTC	2 cut(s)	164, 614
BstACI	GRCGYC	3 cut(s)	279, 765, 1194
BstAFI	CTTAAG	1 cut(s)	1216
BstAPI	GCANNNNNTGC	1 cut(s)	1454
BstC8I	GCNNGC	8 cut(s)	55, 406, 422, 703, 937, 1276, 1355, 1359
BstDEI	CTNAG	5 cut(s)	64, 92, 416, 653, 804
BstDSI	CCRYGG	1 cut(s)	1029
BstENI	CCTNNNNNAGG	1 cut(s)	656
BstF5I	GGATG	4 cut(s)	179, 1213, 1314, 1395
BstFNI	CGCG	1 cut(s)	57
BstH2I	RGCGCY	2 cut(s)	282, 438
BstHHI	GCGC	3 cut(s)	59, 281, 437
BstKTI	GATC	6 cut(s)	90, 98, 149, 586, 1332, 1591
BstMAI	GTCTC	2 cut(s)	475, 807
BstMBI	GATC	6 cut(s)	87, 95, 146, 583, 1329, 1588
BstMWI	GCNNNNNNNGC	5 cut(s)	503, 668, 1253, 1454, 1499
BstNI	CCWGG	5 cut(s)	370, 410, 697, 759, 1482
BstSCI	CCNGG	6 cut(s)	368, 408, 672, 695, 757, 1480
BstSFI	CTRYAG	2 cut(s)	849, 1334
BstSLI	GKGCMC	1 cut(s)	1061
BstUI	CGCG	1 cut(s)	57
BstV1I	GCAGC	8 cut(s)	411, 835, 863, 919, 1348, 1481, 1505, 1546
BstV2I	GAAGAC	1 cut(s)	703
BstX2I	RGATCY	2 cut(s)	95, 1329
BstXI	CCANNNNNNTGG	2 cut(s)	369, 1465
BstYI	RGATCY	2 cut(s)	95, 1329
BsuI	GTATCC	1 cut(s)	1231
BtgI	CCRYGG	1 cut(s)	1029
BtgZI	GCGATG	2 cut(s)	292, 385
BtsCI	GGATG	4 cut(s)	179, 1213, 1314, 1395
BtsI	GCAGTG	1 cut(s)	1555
BtsIMutI	CAGTG	2 cut(s)	508, 1555
Cac8I	GCNNGC	8 cut(s)	55, 406, 422, 703, 937, 1276, 1355, 1359
CfoI	GCGC	3 cut(s)	59, 281, 437
Cfr10I	RCCGGY	2 cut(s)	404, 1274
Cfr13I	GGNCC	6 cut(s)	337, 451, 661, 1057, 1058, 1681
CseI	GACGC	2 cut(s)	773, 1183
CsiI	ACCWGGT	2 cut(s)	757, 1480
Csp6I	GTAC	4 cut(s)	687, 1092, 1478, 1567
CviAII	CATG	5 cut(s)	1030, 1233, 1427, 1459, 1621
CviQI	GTAC	4 cut(s)	687, 1092, 1478, 1567
DdeI	CTNAG	5 cut(s)	64, 92, 416, 653, 804
DinI	GGCGCC	1 cut(s)	280
DpnI	GATC	6 cut(s)	89, 97, 148, 585, 1331, 1590
DpnII	GATC	6 cut(s)	87, 95, 146, 583, 1329, 1588
DraI	TTTAAA	1 cut(s)	1606
EaeI	YGGCCR	3 cut(s)	1272, 1276, 1355
Eam1104I	CTCTTC	2 cut(s)	164, 614
EarI	CTCTTC	2 cut(s)	164, 614
EciI	GGCGGA	2 cut(s)	59, 258
Eco130I	CCWWGG	4 cut(s)	911, 1005, 1029, 1291
Eco147I	AGGCCT	1 cut(s)	318
Eco24I	GRGCYC	1 cut(s)	1061
Eco47I	GGWCC	1 cut(s)	337
Eco57I	CTGAAG	2 cut(s)	484, 1361
EcoNI	CCTNNNNNAGG	1 cut(s)	656
EcoO109I	RGGNCCY	2 cut(s)	661, 1058
EcoRII	CCWGG	5 cut(s)	368, 408, 695, 757, 1480
EcoT14I	CCWWGG	4 cut(s)	911, 1005, 1029, 1291
EcoT22I	ATGCAT	1 cut(s)	1082
EcoT38I	GRGCYC	1 cut(s)	1061
EgeI	GGCGCC	1 cut(s)	280
EheI	GGCGCC	1 cut(s)	280
ErhI	CCWWGG	4 cut(s)	911, 1005, 1029, 1291
FaeI	CATG	5 cut(s)	1033, 1236, 1430, 1462, 1624
FaqI	GGGAC	3 cut(s)	28, 275, 323
FatI	CATG	5 cut(s)	1029, 1232, 1426, 1458, 1620
FauI	CCCGC	4 cut(s)	62, 108, 122, 429
FokI	GGATG	4 cut(s)	166, 1220, 1321, 1382
FriOI	GRGCYC	1 cut(s)	1061
FseI	GGCCGGCC	1 cut(s)	1278
FspBI	CTAG	7 cut(s)	128, 320, 828, 936, 962, 974, 1262
GlaI	GCGC	3 cut(s)	58, 280, 436
GsaI	CCCAGC	2 cut(s)	750, 1476
GsuI	CTGGAG	1 cut(s)	1067
HaeII	RGCGCY	2 cut(s)	282, 438
HapII	CCGG	5 cut(s)	405, 474, 491, 674, 1275
HgaI	GACGC	2 cut(s)	773, 1183
HhaI	GCGC	3 cut(s)	59, 281, 437
Hin1I	GRCGYC	3 cut(s)	279, 765, 1194
Hin1II	CATG	5 cut(s)	1033, 1236, 1430, 1462, 1624
Hin6I	GCGC	3 cut(s)	57, 279, 435
HinP1I	GCGC	3 cut(s)	57, 279, 435
HincII	GTYRAC	2 cut(s)	648, 1284
HindII	GTYRAC	2 cut(s)	648, 1284
HindIII	AAGCTT	2 cut(s)	779, 986
HinfI	GANTC	1 cut(s)	561
HpaII	CCGG	5 cut(s)	405, 474, 491, 674, 1275
HphI	GGTGA	4 cut(s)	141, 593, 773, 907
Hpy166II	GTNNAC	4 cut(s)	648, 755, 1284, 1567
Hpy188I	TCNGA	3 cut(s)	95, 146, 483
Hpy188III	TCNNGA	5 cut(s)	474, 568, 998, 1595, 1645
Hpy8I	GTNNAC	4 cut(s)	648, 755, 1284, 1567
Hpy99I	CGWCG	2 cut(s)	353, 434
HpyAV	CCTTC	4 cut(s)	193, 304, 508, 553
HpyCH4III	ACNGT	1 cut(s)	1338
HpyCH4V	TGCA	5 cut(s)	851, 1080, 1395, 1412, 1448
HpyF10VI	GCNNNNNNNGC	5 cut(s)	503, 668, 1253, 1454, 1499
HpyF3I	CTNAG	5 cut(s)	64, 92, 416, 653, 804
Hsp92I	GRCGYC	3 cut(s)	279, 765, 1194
Hsp92II	CATG	5 cut(s)	1033, 1236, 1430, 1462, 1624
HspAI	GCGC	3 cut(s)	57, 279, 435
KasI	GGCGCC	1 cut(s)	278
Kpn2I	TCCGGA	1 cut(s)	473
KpnI	GGTACC	1 cut(s)	1481
KroI	GCCGGC	2 cut(s)	404, 1274
KroNI	GCCGGC	2 cut(s)	406, 1276
Kzo9I	GATC	6 cut(s)	87, 95, 146, 583, 1329, 1588
LguI	GCTCTTC	1 cut(s)	614
LmnI	GCTCC	2 cut(s)	1433, 1574
Lsp1109I	GCAGC	8 cut(s)	411, 835, 863, 919, 1348, 1481, 1505, 1546
LweI	GCATC	3 cut(s)	140, 1009, 1404
MabI	ACCWGGT	2 cut(s)	757, 1480
MaeI	CTAG	7 cut(s)	128, 320, 828, 936, 962, 974, 1262
MaeIII	GTNAC	7 cut(s)	175, 355, 735, 761, 821, 1063, 1108
MalI	GATC	6 cut(s)	89, 97, 148, 585, 1331, 1590
MbiI	CCGCTC	1 cut(s)	78
MboI	GATC	6 cut(s)	87, 95, 146, 583, 1329, 1588
MboII	GAAGA	6 cut(s)	151, 379, 631, 703, 1367, 1583
MfeI	CAATTG	1 cut(s)	374
MflI	RGATCY	2 cut(s)	95, 1329
MhlI	GDGCHC	3 cut(s)	626, 835, 1061
MlsI	TGGCCA	1 cut(s)	1357
MluCI	AATT	6 cut(s)	219, 374, 875, 900, 1315, 1673
MluNI	TGGCCA	1 cut(s)	1357
Mly113I	GGCGCC	1 cut(s)	279
Mox20I	TGGCCA	1 cut(s)	1357
Mph1103I	ATGCAT	1 cut(s)	1082
MroI	TCCGGA	1 cut(s)	473
MroNI	GCCGGC	2 cut(s)	404, 1274
MscI	TGGCCA	1 cut(s)	1357
MseI	TTAA	7 cut(s)	726, 842, 873, 1217, 1535, 1605, 1632
Msp20I	TGGCCA	1 cut(s)	1357
MspA1I	CMGCKG	4 cut(s)	424, 818, 1361, 1472
MspCI	CTTAAG	1 cut(s)	1216
MspI	CCGG	5 cut(s)	405, 474, 491, 674, 1275
MspR9I	CCNGG	6 cut(s)	370, 410, 674, 697, 759, 1482
MunI	CAATTG	1 cut(s)	374
Mva1269I	GAATGC	1 cut(s)	1082
MvaI	CCWGG	5 cut(s)	370, 410, 697, 759, 1482
MvnI	CGCG	1 cut(s)	57
MwoI	GCNNNNNNNGC	5 cut(s)	503, 668, 1253, 1454, 1499
NaeI	GCCGGC	2 cut(s)	406, 1276
NarI	GGCGCC	1 cut(s)	279
NciI	CCSGG	1 cut(s)	674
NcoI	CCATGG	1 cut(s)	1029
NdeII	GATC	6 cut(s)	87, 95, 146, 583, 1329, 1588
NgoMIV	GCCGGC	2 cut(s)	404, 1274
NheI	GCTAGC	1 cut(s)	935
NlaIII	CATG	5 cut(s)	1033, 1236, 1430, 1462, 1624
NlaIV	GGNNCC	4 cut(s)	280, 339, 1059, 1479
NmuCI	GTSAC	4 cut(s)	355, 735, 761, 1063
NsiI	ATGCAT	1 cut(s)	1082
PceI	AGGCCT	1 cut(s)	318
PciSI	GCTCTTC	1 cut(s)	614
PctI	GAATGC	1 cut(s)	1082
PdiI	GCCGGC	2 cut(s)	406, 1276
PfeI	GAWTC	1 cut(s)	561
PluTI	GGCGCC	1 cut(s)	282
Psp6I	CCWGG	5 cut(s)	368, 408, 695, 757, 1480
PspFI	CCCAGC	2 cut(s)	746, 1472
PspGI	CCWGG	5 cut(s)	368, 408, 695, 757, 1480
PspN4I	GGNNCC	4 cut(s)	280, 339, 1059, 1479
PspOMI	GGGCCC	1 cut(s)	1057
PspPI	GGNCC	6 cut(s)	337, 451, 661, 1057, 1058, 1681
PstI	CTGCAG	1 cut(s)	853
PsuI	RGATCY	2 cut(s)	95, 1329
PvuII	CAGCTG	2 cut(s)	1361, 1472
RigI	GGCCGGCC	1 cut(s)	1278
RsaI	GTAC	4 cut(s)	688, 1093, 1479, 1568
RsaNI	GTAC	4 cut(s)	687, 1092, 1478, 1567
SapI	GCTCTTC	1 cut(s)	614
SaqAI	TTAA	7 cut(s)	726, 842, 873, 1217, 1535, 1605, 1632
Sau3AI	GATC	6 cut(s)	87, 95, 146, 583, 1329, 1588
Sau96I	GGNCC	6 cut(s)	337, 451, 661, 1057, 1058, 1681
ScaI	AGTACT	1 cut(s)	688
ScrFI	CCNGG	6 cut(s)	370, 410, 674, 697, 759, 1482
SduI	GDGCHC	3 cut(s)	626, 835, 1061
SexAI	ACCWGGT	2 cut(s)	757, 1480
SfaNI	GCATC	3 cut(s)	140, 1009, 1404
SfcI	CTRYAG	2 cut(s)	849, 1334
SfoI	GGCGCC	1 cut(s)	280
SinI	GGWCC	1 cut(s)	337
SmlI	CTYRAG	3 cut(s)	273, 1216, 1348
SmoI	CTYRAG	3 cut(s)	273, 1216, 1348
Sse9I	AATT	6 cut(s)	219, 374, 875, 900, 1315, 1673
SseBI	AGGCCT	1 cut(s)	318
SspDI	GGCGCC	1 cut(s)	278
SspMI	CTAG	7 cut(s)	128, 320, 828, 936, 962, 974, 1262
StuI	AGGCCT	1 cut(s)	318
StyD4I	CCNGG	6 cut(s)	368, 408, 672, 695, 757, 1480
StyI	CCWWGG	4 cut(s)	911, 1005, 1029, 1291
TaaI	ACNGT	1 cut(s)	1338
TaqI	TCGA	1 cut(s)	351
TasI	AATT	6 cut(s)	219, 374, 875, 900, 1315, 1673
TatI	WGTACW	2 cut(s)	686, 1566
TauI	GCSGC	5 cut(s)	75, 78, 497, 1160, 1385
TfiI	GAWTC	1 cut(s)	561
Tru1I	TTAA	7 cut(s)	726, 842, 873, 1217, 1535, 1605, 1632
Tru9I	TTAA	7 cut(s)	726, 842, 873, 1217, 1535, 1605, 1632
TscAI	CASTG	2 cut(s)	508, 1555
TseFI	GTSAC	4 cut(s)	355, 735, 761, 1063
TseI	GCWGC	8 cut(s)	424, 848, 851, 932, 1361, 1469, 1493, 1559
Tsp45I	GTSAC	4 cut(s)	355, 735, 761, 1063
TspDTI	ATGAA	2 cut(s)	286, 1475
TspRI	CASTG	2 cut(s)	508, 1555
Vha464I	CTTAAG	1 cut(s)	1216
VpaK11BI	GGWCC	1 cut(s)	337
XagI	CCTNNNNNAGG	1 cut(s)	656
XapI	RAATTY	1 cut(s)	1673
XcmI	CCANNNNNNNNNTGG	1 cut(s)	406
XspI	CTAG	7 cut(s)	128, 320, 828, 936, 962, 974, 1262
ZrmI	AGTACT	1 cut(s)	688
Zsp2I	ATGCAT	1 cut(s)	1082

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.