AT5G64440

Fatty acid amide

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
25765712 .. 25770618
4907 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G64440.1

Sequence Viewer

Length: 1824 bp
ATGGGTAAGTATCAGGTCATGAAACGTGCAAGTGAGGTTGATCTTTCTACTGTCAAATATAAAGCTGAAACCATGAAAGCTCCTCATTTGACTGGCCTTTCCTTCAAGTTGTTCGTTAATTTGCTTGAAGCACCACTTATAGGCTCTTTGATTGTTGATTATTTGAAGAAAGACAATGGCATGACAAAGATTTTTCGCAACACAGTTATACCAGAAGAGCCCATGTTTAGACCGGAGTTCCCATCTCAAGAACCGGAGCATGATGTTGTCATTGTTGGCGAAGATGAAAGTCCTATAGACAGATTGGAAACAGCCTTGAAATGTCTTCCTCAGTATGATCCTTCTCGTAGCTTGCATGCAGATCCAGTGTCATCTTTCCGGTACTGGAAGATTCGTGATTATGCATATGCCTATAGATCTAAGCTGACAACTCCATTGCAGGTAGCAAAAAGAATAATCTCAATCATAGAGGAGTTTGGCTATGACAAGCCTCCAACACCATTTTTGATTAGATTTGATGCCAATGAAGTCATAAAGCAAGCTGAAGCTTCTACACGGAGGTTTGAACAAGGAAATCCAATATCTGTTTTGGATGGAATATTTGTGACAATCAAGGACGATATTGATTGTTTACCCCATCCGACAAATGGTGGAACAACATGGCTGCATGAGGATCGTTCTGTGGAGAAGGATTCAGCTGTTGTTTCAAAACTGCGTTCTTGTGGTGCAATCTTACTTGGCAAGGCAAATATGCATGAGTTAGGCATGGGGACCACCGGGAACAATTCAAATTACGGAACCACAAGAAACCCGCATGATCCTAAAAGGTACACGGGCGGATCTTCCTCAGGTTCAGCAGCTATTGTAGCCGCTGGACTATGTTCAGCTGCTCTAGGAACAGATGGTGGAGGTTCCGTTCGCATTCCTTCAGCACTTTGTGGTATAACGGGACTGAAGACAACATATGGTCGGACAGATATGACAGGGTCATTATGTGAAGGTGGAACAGTGGAAATAATTGGTCCACTTGCTTCATCTCTGGAAGATGCCTTCTTGGTGTATGCTGCAATCTTGGGTTCTTCATCTGCTGATAGATATAATTTGAAACCGAGCCCACCGTGTTTTCCAAAGTTATTGTCTCACAACGGAAGCAATGCAATAGGATCTCTACGACTAGGGAAATATACAAAGTGGTTTAATGATGTCAGTTCAAGTGACATCTCTGACAAATGCGAAGACATCCTTAAGCTCCTATCAAACAATCACGGTTGCAAAGTGGTGGAGATAGTGGTTCCTGAACTGGAAGAGATGCGTGCAGCCCATGTTATTTCGATTGGGTCTCCAACACTGTCTTCTCTTACTCCCTACTGTGAAGCTGGGAAAAATTCAAAACTAAGTTATGACACTCGTACCAGCTTTGCAATTTTCCGTTCATTCTCTGCTTCAGACTATATCGCTGCTCAATGTCTTAGGCGAAGATTGATGGAGTATCACTTGAATATCTTCAAAGACGTTGATGTCATTGTGACCCCTACAACTGGAATGACAGCTCCAGTGATACCTCCTGATGCTCTCAAAAATGGAGAAACCAATATTCAAGTGACAACTGATTTAATGCGCTTCGTTCTAGCTGCAAATCTCCTCGGCTTCCCTGCCATATCAGTCCCGGTTGGTTATGATAAAGAGGGGCTTCCTATAGGATTACAAATAATGGGAAGACCTTGGGCCGAAGCTACCGTCCTTGGTTTAGCTGCCGCAGTCGAGGAACTGGCTCCAGTTACCAAGAAACCTGCAATCTTTTATGATATTCTCAATACAAACTGA

Protein Analysis

607

Amino Acids

66.08

Weight (kDa)

6.18

Isoelectric Point (pI)

38.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Amidase PF01425 170 - 581 3.8e-87 Amidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1517
Acc36I ACCTGC 2 cut(s) 430, 1798
AciI CCGC 4 cut(s) 812, 837, 870, 1755
AclWI GGATC 6 cut(s) 332, 356, 681, 812, 847, 1171
AcsI RAATTY 1 cut(s) 1384
AcuI CTGAAG 4 cut(s) 564, 912, 974, 1428
AdeI CACNNNGTG 1 cut(s) 938
AfaI GTAC 3 cut(s) 383, 830, 1411
AfiI CCNNNNNNNGG 3 cut(s) 140, 647, 1538
AflII CTTAAG 1 cut(s) 1244
AjuI GAANNNNNNNTTGG 2 cut(s) 1336, 1368
AloI GAACNNNNNNTCC 2 cut(s) 900, 932
Alw26I GTCTC 2 cut(s) 1143, 1344
AlwI GGATC 6 cut(s) 332, 356, 681, 812, 847, 1171
AoxI GGCC 2 cut(s) 94, 1725
ApeKI GCWGC 8 cut(s) 664, 857, 887, 1064, 1316, 1457, 1631, 1751
ApoI RAATTY 1 cut(s) 1384
ArsI GACNNNNNNTTYG 4 cut(s) 1121, 1153, 1722, 1754
Asp700I GAANNNNTTC 1 cut(s) 1502
AspLEI GCGC 1 cut(s) 1620
AspS9I GGNCC 3 cut(s) 771, 1022, 1725
AsuC2I CCSGG 2 cut(s) 778, 1667
AvaII GGWCC 2 cut(s) 771, 1022
AxyI CCTNAGG 1 cut(s) 847
BaeI ACNNNNGTAYC 2 cut(s) 1393, 1426
BanII GRGCYC 2 cut(s) 222, 1115
BbsI GAAGAC 5 cut(s) 317, 962, 1242, 1344, 1723
BbvI GCAGC 8 cut(s) 651, 869, 874, 1051, 1328, 1444, 1618, 1738
BccI CCATC 5 cut(s) 250, 587, 645, 896, 1477
BcgI CGANNNNNNTGC 2 cut(s) 656, 690
BcnI CCSGG 2 cut(s) 778, 1667
BcoDI GTCTC 2 cut(s) 1143, 1344
BfaI CTAG 3 cut(s) 893, 1175, 1628
BfmI CTRYAG 3 cut(s) 294, 412, 1695
BfrI CTTAAG 1 cut(s) 1244
BfuAI ACCTGC 2 cut(s) 430, 1798
BglII AGATCT 1 cut(s) 416
Bme1390I CCNGG 2 cut(s) 778, 1667
Bme18I GGWCC 2 cut(s) 771, 1022
BmgT120I GGNCC 3 cut(s) 771, 1022, 1725
BmiI GGNNCC 5 cut(s) 772, 799, 913, 1293, 1773
BmrFI CCNGG 2 cut(s) 778, 1667
BmsI GCATC 4 cut(s) 508, 1036, 1299, 1558
BpiI GAAGAC 5 cut(s) 317, 962, 1242, 1344, 1723
BpmI CTGGAG 2 cut(s) 1536, 1758
BpuEI CTTGAG 1 cut(s) 231
BpuMI CCSGG 2 cut(s) 778, 1667
BsaI GGTCTC 1 cut(s) 1344
BsaJI CCNNGG 3 cut(s) 1642, 1721, 1741
BsaWI WCCGGW 3 cut(s) 232, 253, 378
BsaXI ACNNNNNCTCC 2 cut(s) 900, 930
Bsc4I CCNNNNNNNGG 3 cut(s) 140, 647, 1538
Bse1I ACTGG 8 cut(s) 97, 365, 389, 1305, 1543, 1553, 1773, 1775
Bse21I CCTNAGG 1 cut(s) 847
Bse3DI GCAATG 2 cut(s) 434, 1159
BseDI CCNNGG 3 cut(s) 1642, 1721, 1741
BseGI GGATG 3 cut(s) 598, 637, 1239
BseLI CCNNNNNNNGG 3 cut(s) 140, 647, 1538
BseMI GCAATG 2 cut(s) 434, 1159
BseMII CTCAG 2 cut(s) 344, 861
BseNI ACTGG 8 cut(s) 97, 365, 389, 1305, 1543, 1553, 1773, 1775
BseRI GAGGAG 3 cut(s) 72, 485, 1631
BseXI GCAGC 8 cut(s) 651, 869, 874, 1051, 1328, 1444, 1618, 1738
BseYI CCCAGC 1 cut(s) 1376
BsgI GTGCAG 1 cut(s) 1335
BshFI GGCC 2 cut(s) 96, 1727
BsiSI CCGG 5 cut(s) 233, 254, 379, 777, 1667
BslFI GGGAC 3 cut(s) 784, 963, 1649
BslI CCNNNNNNNGG 3 cut(s) 140, 647, 1538
BsmAI GTCTC 2 cut(s) 1143, 1344
BsmFI GGGAC 3 cut(s) 784, 963, 1649
BsmI GAATGC 1 cut(s) 921
BsnI GGCC 2 cut(s) 96, 1727
Bso31I GGTCTC 1 cut(s) 1344
Bsp1286I GDGCHC 2 cut(s) 222, 1115
Bsp143I GATC 8 cut(s) 40, 337, 361, 416, 673, 817, 839, 1163
BspACI CCGC 4 cut(s) 812, 837, 870, 1755
BspANI GGCC 2 cut(s) 96, 1727
BspCNI CTCAG 2 cut(s) 343, 860
BspHI TCATGA 1 cut(s) 18
BspLI GGNNCC 5 cut(s) 772, 799, 913, 1293, 1773
BspMI ACCTGC 2 cut(s) 430, 1798
BspPI GGATC 6 cut(s) 332, 356, 681, 812, 847, 1171
BspQI GCTCTTC 1 cut(s) 210
BspTI CTTAAG 1 cut(s) 1244
BspTNI GGTCTC 1 cut(s) 1344
BsrDI GCAATG 2 cut(s) 434, 1159
BsrI ACTGG 8 cut(s) 97, 365, 389, 1305, 1543, 1553, 1773, 1775
BssECI CCNNGG 3 cut(s) 1642, 1721, 1741
BssMI GATC 8 cut(s) 40, 337, 361, 416, 673, 817, 839, 1163
BssT1I CCWWGG 2 cut(s) 1721, 1741
Bst4CI ACNGT 8 cut(s) 52, 205, 1009, 1119, 1268, 1350, 1370, 1738
Bst6I CTCTTC 2 cut(s) 210, 1299
BstAFI CTTAAG 1 cut(s) 1244
BstC8I GCNNGC 4 cut(s) 353, 357, 540, 1314
BstDEI CTNAG 5 cut(s) 330, 420, 847, 1394, 1469
BstF5I GGATG 3 cut(s) 598, 637, 1239
BstHHI GCGC 1 cut(s) 1620
BstKTI GATC 8 cut(s) 43, 340, 364, 419, 676, 820, 842, 1166
BstMAI GTCTC 2 cut(s) 1143, 1344
BstMBI GATC 8 cut(s) 40, 337, 361, 416, 673, 817, 839, 1163
BstMWI GCNNNNNNNGC 1 cut(s) 866
BstNSI RCATGY 1 cut(s) 359
BstSCI CCNGG 2 cut(s) 776, 1665
BstSFI CTRYAG 3 cut(s) 294, 412, 1695
BstV1I GCAGC 8 cut(s) 651, 869, 874, 1051, 1328, 1444, 1618, 1738
BstV2I GAAGAC 5 cut(s) 317, 962, 1242, 1344, 1723
BstX2I RGATCY 4 cut(s) 361, 416, 839, 1163
BstYI RGATCY 4 cut(s) 361, 416, 839, 1163
Bsu36I CCTNAGG 1 cut(s) 847
BsuRI GGCC 2 cut(s) 96, 1727
BtsCI GGATG 3 cut(s) 598, 637, 1239
BtsIMutI CAGTG 4 cut(s) 372, 1014, 1346, 1560
BveI ACCTGC 2 cut(s) 430, 1798
Cac8I GCNNGC 4 cut(s) 353, 357, 540, 1314
CciI TCATGA 1 cut(s) 18
CfoI GCGC 1 cut(s) 1620
Cfr13I GGNCC 3 cut(s) 771, 1022, 1725
Csp6I GTAC 3 cut(s) 382, 829, 1410
CviQI GTAC 3 cut(s) 382, 829, 1410
DdeI CTNAG 5 cut(s) 330, 420, 847, 1394, 1469
DpnI GATC 8 cut(s) 42, 339, 363, 418, 675, 819, 841, 1165
DpnII GATC 8 cut(s) 40, 337, 361, 416, 673, 817, 839, 1163
DraIII CACNNNGTG 1 cut(s) 938
DrdI GACNNNNNNGTC 1 cut(s) 1517
DseDI GACNNNNNNGTC 1 cut(s) 1517
Eam1104I CTCTTC 2 cut(s) 210, 1299
EarI CTCTTC 2 cut(s) 210, 1299
EciI GGCGGA 1 cut(s) 852
Eco130I CCWWGG 2 cut(s) 1721, 1741
Eco24I GRGCYC 2 cut(s) 222, 1115
Eco31I GGTCTC 1 cut(s) 1344
Eco47I GGWCC 2 cut(s) 771, 1022
Eco57I CTGAAG 4 cut(s) 564, 912, 974, 1428
Eco81I CCTNAGG 1 cut(s) 847
EcoT14I CCWWGG 2 cut(s) 1721, 1741
EcoT22I ATGCAT 2 cut(s) 406, 756
EcoT38I GRGCYC 2 cut(s) 222, 1115
ErhI CCWWGG 2 cut(s) 1721, 1741
FalI AAGNNNNNCTT 6 cut(s) 120, 152, 1227, 1259, 1674, 1706
FaqI GGGAC 3 cut(s) 784, 963, 1649
FauI CCCGC 1 cut(s) 819
FauNDI CATATG 2 cut(s) 406, 964
FokI GGATG 3 cut(s) 605, 624, 1226
FriOI GRGCYC 2 cut(s) 222, 1115
FspBI CTAG 3 cut(s) 893, 1175, 1628
GlaI GCGC 1 cut(s) 1619
GsaI CCCAGC 1 cut(s) 1380
GsuI CTGGAG 2 cut(s) 1536, 1758
HaeIII GGCC 2 cut(s) 96, 1727
HapII CCGG 5 cut(s) 233, 254, 379, 777, 1667
HhaI GCGC 1 cut(s) 1620
Hin6I GCGC 1 cut(s) 1618
HinP1I GCGC 1 cut(s) 1618
HindIII AAGCTT 1 cut(s) 546
HinfI GANTC 2 cut(s) 391, 692
HpaII CCGG 5 cut(s) 233, 254, 379, 777, 1667
Hpy166II GTNNAC 3 cut(s) 632, 831, 1025
Hpy188I TCNGA 4 cut(s) 642, 972, 1225, 1447
Hpy188III TCNNGA 6 cut(s) 19, 248, 395, 1040, 1295, 1565
Hpy8I GTNNAC 3 cut(s) 632, 831, 1025
HpyAV CCTTC 6 cut(s) 112, 351, 682, 936, 992, 1060
HpyCH4III ACNGT 8 cut(s) 52, 205, 1009, 1119, 1268, 1350, 1370, 1738
HpyCH4IV ACGT 2 cut(s) 25, 1512
HpyF10VI GCNNNNNNNGC 1 cut(s) 866
HpyF3I CTNAG 5 cut(s) 330, 420, 847, 1394, 1469
HpySE526I ACGT 2 cut(s) 25, 1512
HspAI GCGC 1 cut(s) 1618
Kzo9I GATC 8 cut(s) 40, 337, 361, 416, 673, 817, 839, 1163
LguI GCTCTTC 1 cut(s) 210
LmnI GCTCC 5 cut(s) 85, 256, 1254, 1555, 1777
Lsp1109I GCAGC 8 cut(s) 651, 869, 874, 1051, 1328, 1444, 1618, 1738
LweI GCATC 4 cut(s) 508, 1036, 1299, 1558
MaeI CTAG 3 cut(s) 893, 1175, 1628
MaeII ACGT 2 cut(s) 25, 1512
MaeIII GTNAC 5 cut(s) 604, 1214, 1525, 1600, 1777
MalI GATC 8 cut(s) 42, 339, 363, 418, 675, 819, 841, 1165
MboI GATC 8 cut(s) 40, 337, 361, 416, 673, 817, 839, 1163
MflI RGATCY 4 cut(s) 361, 416, 839, 1163
MhlI GDGCHC 2 cut(s) 222, 1115
MluCI AATT 7 cut(s) 118, 784, 790, 1017, 1099, 1384, 1422
MmeI TCCRAC 4 cut(s) 518, 665, 950, 1367
Mph1103I ATGCAT 2 cut(s) 406, 756
MroXI GAANNNNTTC 1 cut(s) 1502
MseI TTAA 4 cut(s) 117, 1197, 1245, 1613
MspA1I CMGCKG 3 cut(s) 698, 872, 887
MspCI CTTAAG 1 cut(s) 1244
MspI CCGG 5 cut(s) 233, 254, 379, 777, 1667
MspR9I CCNGG 2 cut(s) 778, 1667
Mva1269I GAATGC 1 cut(s) 921
MwoI GCNNNNNNNGC 1 cut(s) 866
NciI CCSGG 2 cut(s) 778, 1667
NdeI CATATG 2 cut(s) 406, 964
NdeII GATC 8 cut(s) 40, 337, 361, 416, 673, 817, 839, 1163
NlaIV GGNNCC 5 cut(s) 772, 799, 913, 1293, 1773
NmeAIII GCCGAG 1 cut(s) 1623
NmuCI GTSAC 4 cut(s) 604, 1214, 1525, 1600
NsiI ATGCAT 2 cut(s) 406, 756
NspI RCATGY 1 cut(s) 359
PaeI GCATGC 1 cut(s) 359
PagI TCATGA 1 cut(s) 18
PciSI GCTCTTC 1 cut(s) 210
PctI GAATGC 1 cut(s) 921
PdmI GAANNNNTTC 1 cut(s) 1502
PfeI GAWTC 2 cut(s) 391, 692
PflFI GACNNNGTC 1 cut(s) 985
PspFI CCCAGC 1 cut(s) 1376
PspN4I GGNNCC 5 cut(s) 772, 799, 913, 1293, 1773
PspPI GGNCC 3 cut(s) 771, 1022, 1725
PsuI RGATCY 4 cut(s) 361, 416, 839, 1163
PsyI GACNNNGTC 1 cut(s) 985
PvuII CAGCTG 2 cut(s) 698, 887
RsaI GTAC 3 cut(s) 383, 830, 1411
RsaNI GTAC 3 cut(s) 382, 829, 1410
SapI GCTCTTC 1 cut(s) 210
SaqAI TTAA 4 cut(s) 117, 1197, 1245, 1613
Sau3AI GATC 8 cut(s) 40, 337, 361, 416, 673, 817, 839, 1163
Sau96I GGNCC 3 cut(s) 771, 1022, 1725
ScrFI CCNGG 2 cut(s) 778, 1667
SduI GDGCHC 2 cut(s) 222, 1115
SfaNI GCATC 4 cut(s) 508, 1036, 1299, 1558
SfcI CTRYAG 3 cut(s) 294, 412, 1695
SinI GGWCC 2 cut(s) 771, 1022
SmlI CTYRAG 2 cut(s) 246, 1244
SmoI CTYRAG 2 cut(s) 246, 1244
SphI GCATGC 1 cut(s) 359
Sse9I AATT 7 cut(s) 118, 784, 790, 1017, 1099, 1384, 1422
SsiI CCGC 4 cut(s) 812, 837, 870, 1755
SspI AATATT 2 cut(s) 600, 1594
SspMI CTAG 3 cut(s) 893, 1175, 1628
StyD4I CCNGG 2 cut(s) 776, 1665
StyI CCWWGG 2 cut(s) 1721, 1741
TaaI ACNGT 8 cut(s) 52, 205, 1009, 1119, 1268, 1350, 1370, 1738
TaiI ACGT 2 cut(s) 28, 1515
TaqI TCGA 2 cut(s) 1331, 1761
TasI AATT 7 cut(s) 118, 784, 790, 1017, 1099, 1384, 1422
TauI GCSGC 2 cut(s) 872, 1757
TfiI GAWTC 2 cut(s) 391, 692
Tru1I TTAA 4 cut(s) 117, 1197, 1245, 1613
Tru9I TTAA 4 cut(s) 117, 1197, 1245, 1613
TscAI CASTG 4 cut(s) 372, 1014, 1353, 1560
TseFI GTSAC 4 cut(s) 604, 1214, 1525, 1600
TseI GCWGC 8 cut(s) 664, 857, 887, 1064, 1316, 1457, 1631, 1751
Tsp45I GTSAC 4 cut(s) 604, 1214, 1525, 1600
TspDTI ATGAA 7 cut(s) 35, 89, 300, 540, 1023, 1071, 1422
TspGWI ACGGA 5 cut(s) 571, 810, 904, 1161, 1418
TspRI CASTG 4 cut(s) 372, 1014, 1353, 1560
Tth111I GACNNNGTC 1 cut(s) 985
Vha464I CTTAAG 1 cut(s) 1244
VpaK11BI GGWCC 2 cut(s) 771, 1022
XapI RAATTY 1 cut(s) 1384
XceI RCATGY 1 cut(s) 359
XcmI CCANNNNNNNNNTGG 1 cut(s) 644
XmnI GAANNNNTTC 1 cut(s) 1502
XspI CTAG 3 cut(s) 893, 1175, 1628
Zsp2I ATGCAT 2 cut(s) 406, 756
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.