Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0005375

Physical Location & Seq

Genomic Coordinates Reverse (-)

9690361 .. 9702332

Gene Structure 11972 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g11120.t8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1827 bp

ATGGCCAAGAAGCGTGTCATGGTCGCCGCCGAGAACATCGACGCATCCGCCGTCAAGTACGACCGGGAAGAAATCAAAGCTCCGCATTTGACGGGTTTCTTTCTGAAGCTATTCGTATGGATCGTTGAGGCCCCCATTCTTGGTTCTTTGATAACCTCAGTGTTGAAGAAGCAGAACAAGATGACTCAGTTATTGAGGAACACTTACATTCCGGAAGCGCCTATGTTCAAACCTGAATTTCCTCCTCAAGAGCCGGATACCGGGGTGGTTGTTGTCGATGAGGATGGAAAGCCAGAAGACAGAGTTGAGGTGGCCTTCAAGTGTCTTCCAAACTATGATCCTGCTACCTCTTTTAATGGGGATGCAAGTTTGTCTTTCAGGTACTGGAAGATTCGTGACTATGCTTATGCTTATCGCTCCAAGATTGCAACCCCATCTATGGTTGCGGAGCACATTATTTCAGCTTTAGAAGAGTTCAGCAATAAGACACCTCCTCAGCCTTTGCTGCTTTCTTTTGATGCTGAAGAATTGAGGAACCAAGCTGCAGCTTCAACAAAGCGGTTCGAAGAAGGAAATCCGATATCTATCTTAGACGGGATTTTCGTGGCAATCAAGGATGATATAGATTGCTATCCTCATCCGTCCAAGGGTGGAACAACATGGATGCATGAGGTTCGCACTGTCAGCAAGGATGCAGCTTGTGTATCGAAATTACGTAGTTGTGGTGTGATTTTTATTGGGAAGGCAAATATGCATGAGATGGGCATGGGAACAACAGGAAATAATCCAAATTATGGAACAACAAGAAATCCCCATGCACTGGACAGGTACACTGGAGGGTCTTCCTCAGGCCCTGCAGCAATTGTAGCTTCTGGATTATGCTCTGCTGCCCTTGGAACTGACGGTGGAGGTTCAGTCCGTATTCCTTCTTCTCTCTGTGGCGTAGTGGGCTTAAAAACGACATATGGACGGACTGATATAAGCGGGGCATTATGCGATGCTGGTACTGTGGAAATTATTGGACCAATTGCTTCTACAGTGGAAGATGTTGTTCTAGTGTACTCAGCTATTTTGGGCGCCTCTCTTGCAGATAGAATTAGTTTGAGACCGTCCCCACCTTCAGTGCCAGATTTGTCATTATATGAAAGTTTAAATGTTCTGGGATCCTTGCGACTGGGGAAGTATACAGCGTGGTTTAATGATGTGCATTCAACTGATATCTCTGATAAGTGTGAGGATGTTCTTAGTCTTCTATCGAAAAATCATGGTTGCGAGATTGCAGAAATTGTTATACCTGAGCTCCATGAAATGCGTACTGCTCATCTTGTTTCAATTGGATCTGAATGTGTCAGTTCACTAAGTCCGGATTGTGAGGATGGAAATGGTGTGAGATTGACATATGATACACGTACCAGTATGGCCCTGTTCCGATCATTTTCTGCATCAGACTATGTTACTGCCCAGTGCATCAGGAGAAGGATTATGTACCATCATATGGAGATCTTCAAGAAGGTCGATGTGATAGTGACTCCCACAACTGGCATGACAGCACCCAAGATTCCACCCAGTGCTCTTAAAGATGGGGAGACAGACATGCAAGTTACAGGTGATCTTATGCGGTTTATCATCGCTGCAAATCTTCTTGGACTTCCTGCCATTTCTGTACCTGTTGGCTATGATAAACATGGACTTCCAATAGGCCTGCAACTAATTGGCCGTCCCTGGGGTGAAGCTTCAATTTTGCGTTTGGCTTCTGCAGTAGAGGAACTCTGCATGAAGTCCAAGAAGAGGCCTGCATCATATTTTGATGTTCTAAAATCTAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005783 GO:0005794 GO:0005886 GO:0006066 GO:0006576 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009308 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0012505 GO:0016020 GO:0016787 GO:0016810 GO:0016811 GO:0031090 GO:0034308 GO:0034641 GO:0042439 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044106 GO:0044237 GO:0044281 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0047412 GO:0050896 GO:0051704 GO:0051707 GO:0070291 GO:0071704 GO:0071944 GO:0098542 GO:0098588 GO:0098805 GO:1901564 GO:1901615

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Amidase

Protein Analysis

609

Amino Acids

66.01

Weight (kDa)

6.05

Isoelectric Point (pI)

39.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Amidase	PF01425	170 - 421	4.3e-59	Amidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005375)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64440
fragaria_vesca	FvH4_2g11120 FvH4_2g11120 FvH4_2g11120 FvH4_2g11120 FvH4_2g11120 FvH4_2g11120 FvH4_2g11120 FvH4_2g11120 FvH4_2g11120
malus_domestica	MD05G1050200.v1.1
prunus_persica	Prupe.8G076300_v2.0.a1 Prupe.8G076300_v2.0.a1 Prupe.8G076300_v2.0.a1 Prupe.8G076300_v2.0.a1
pyrus_communis	pycom05g04210
rosa_chinensis	RchiOBHm_Chr6g0269381
rosa_laevigata	RLG00000013854
rosa_multiflora	Rmu_sc0003735.1_g000029 Rmu_sc0015769.1_g000001 Rmu_ssc0000291.1_g000010
rosa_roxburghii	Rroxscaffold_7G00198770
rosa_rugosa	Rorug06G0047400
rosa_samantha	Rh6AG167800 Rh6AG331500 Rh6BG173100 Rh6CG167200 Rh6DG159000
rosa_wichuraiana	Rw6G028780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1076
AccB7I	CCANNNNNTGG	3 cut(s)	794, 820, 1495
AccI	GTMKAC	1 cut(s)	1184
AccIII	TCCGGA	2 cut(s)	211, 1363
AciI	CCGC	7 cut(s)	27, 48, 83, 446, 559, 984, 1618
AclWI	GGATC	5 cut(s)	128, 332, 1158, 1171, 1345
AcoI	YGGCCR	2 cut(s)	3, 1714
AcsI	RAATTY	1 cut(s)	236
AcuI	CTGAAG	3 cut(s)	125, 543, 1104
AcyI	GRCGYC	1 cut(s)	1077
AdeI	CACNNNGTG	1 cut(s)	1568
AfaI	GTAC	9 cut(s)	59, 383, 830, 1006, 1061, 1315, 1411, 1487, 1665
AflIII	ACRYGT	1 cut(s)	1406
AgsI	TTSAA	8 cut(s)	166, 229, 319, 552, 1212, 1332, 1507, 1737
AjnI	CCWGG	1 cut(s)	1721
Alw21I	GWGCWC	3 cut(s)	453, 1302, 1573
Alw26I	GTCTC	2 cut(s)	1099, 1580
AlwI	GGATC	5 cut(s)	128, 332, 1158, 1171, 1345
AlwNI	CAGNNNCTG	2 cut(s)	384, 854
Aor13HI	TCCGGA	2 cut(s)	211, 1363
AoxI	GGCC	8 cut(s)	3, 129, 312, 850, 1419, 1699, 1714, 1790
ApeKI	GCWGC	7 cut(s)	505, 542, 545, 695, 857, 887, 1631
ApoI	RAATTY	1 cut(s)	236
ArsI	GACNNNNNNTTYG	2 cut(s)	584, 616
Asp700I	GAANNNNTTC	1 cut(s)	110
AspLEI	GCGC	2 cut(s)	220, 1079
AspS9I	GGNCC	4 cut(s)	130, 851, 1022, 1420
AsuC2I	CCSGG	2 cut(s)	65, 262
AsuHPI	GGTGA	2 cut(s)	1619, 1739
AsuII	TTCGAA	1 cut(s)	564
AvaII	GGWCC	1 cut(s)	1022
AxyI	CCTNAGG	1 cut(s)	847
BaeI	ACNNNNGTAYC	2 cut(s)	249, 282
BalI	TGGCCA	1 cut(s)	5
BamHI	GGATCC	1 cut(s)	1163
BanI	GGYRCC	1 cut(s)	1076
BanII	GRGCYC	1 cut(s)	1302
BarI	GAAGNNNNNNTAC	2 cut(s)	913, 945
BbsI	GAAGAC	4 cut(s)	303, 317, 834, 1241
Bbv12I	GWGCWC	3 cut(s)	453, 1302, 1573
BbvCI	CCTCAGC	1 cut(s)	495
BbvI	GCAGC	7 cut(s)	492, 529, 557, 707, 869, 874, 1618
BccI	CCATC	6 cut(s)	278, 442, 754, 1370, 1497, 1574
BceAI	ACGGC	2 cut(s)	35, 1701
BcgI	CGANNNNNNTGC	2 cut(s)	656, 690
BciT130I	CCWGG	1 cut(s)	1723
BciVI	GTATCC	1 cut(s)	250
BcnI	CCSGG	2 cut(s)	65, 262
BcoDI	GTCTC	2 cut(s)	1099, 1580
BfaI	CTAG	1 cut(s)	1055
BfmI	CTRYAG	4 cut(s)	543, 855, 1035, 1755
BfoI	RGCGCY	2 cut(s)	221, 1080
BfuI	GTATCC	1 cut(s)	250
BglII	AGATCT	1 cut(s)	1500
BisI	GCNGC	8 cut(s)	27, 506, 543, 546, 696, 858, 888, 1632
BlsI	GCNGC	8 cut(s)	28, 507, 544, 547, 697, 859, 889, 1633
Bme1390I	CCNGG	3 cut(s)	65, 262, 1723
Bme18I	GGWCC	1 cut(s)	1022
BmgT120I	GGNCC	4 cut(s)	130, 851, 1022, 1420
BmiI	GGNNCC	4 cut(s)	132, 536, 1078, 1165
BmrFI	CCNGG	3 cut(s)	65, 262, 1723
BmrI	ACTGGG	3 cut(s)	1184, 1456, 1560
BmsI	GCATC	9 cut(s)	53, 352, 508, 654, 682, 988, 1451, 1476, 1805
BmuI	ACTGGG	3 cut(s)	1184, 1456, 1560
BpiI	GAAGAC	4 cut(s)	303, 317, 834, 1241
BpmI	CTGGAG	1 cut(s)	855
Bpu10I	CCTNAGC	2 cut(s)	495, 1296
Bpu14I	TTCGAA	1 cut(s)	564
BpuEI	CTTGAG	1 cut(s)	231
BpuMI	CCSGG	2 cut(s)	65, 262
BsaAI	YACGTR	2 cut(s)	716, 1409
BsaBI	GATNNNNATC	2 cut(s)	584, 630
BsaHI	GRCGYC	1 cut(s)	1077
BsaI	GGTCTC	1 cut(s)	1099
BsaJI	CCNNGG	5 cut(s)	261, 645, 892, 1721, 1722
BsaWI	WCCGGW	2 cut(s)	211, 1363
BsaXI	ACNNNNNCTCC	4 cut(s)	900, 930, 1284, 1314
Bse1I	ACTGG	8 cut(s)	389, 825, 838, 1179, 1413, 1462, 1543, 1566
Bse21I	CCTNAGG	1 cut(s)	847
Bse8I	GATNNNNATC	2 cut(s)	584, 630
BseAI	TCCGGA	2 cut(s)	211, 1363
BseBI	CCWGG	1 cut(s)	1723
BseDI	CCNNGG	5 cut(s)	261, 645, 892, 1721, 1722
BseGI	GGATG	9 cut(s)	44, 289, 367, 622, 637, 669, 697, 1243, 1381
BseJI	GATNNNNATC	2 cut(s)	584, 630
BseMII	CTCAG	6 cut(s)	171, 200, 509, 861, 1077, 1287
BseNI	ACTGG	8 cut(s)	389, 825, 838, 1179, 1413, 1462, 1543, 1566
BseRI	GAGGAG	2 cut(s)	234, 483
BseXI	GCAGC	7 cut(s)	492, 529, 557, 707, 869, 874, 1618
Bsh1285I	CGRYCG	1 cut(s)	64
BshFI	GGCC	8 cut(s)	5, 131, 314, 852, 1421, 1701, 1716, 1792
BshNI	GGYRCC	1 cut(s)	1076
BsiEI	CGRYCG	1 cut(s)	64
BsiHKAI	GWGCWC	3 cut(s)	453, 1302, 1573
BsiSI	CCGG	5 cut(s)	64, 212, 254, 261, 1364
BslFI	GGGAC	2 cut(s)	1096, 1704
BsmAI	GTCTC	2 cut(s)	1099, 1580
BsmFI	GGGAC	2 cut(s)	1096, 1704
BsmI	GAATGC	1 cut(s)	1207
BsnI	GGCC	8 cut(s)	5, 131, 314, 852, 1421, 1701, 1716, 1792
Bso31I	GGTCTC	1 cut(s)	1099
Bsp119I	TTCGAA	1 cut(s)	564
Bsp1286I	GDGCHC	3 cut(s)	453, 1302, 1573
Bsp13I	TCCGGA	2 cut(s)	211, 1363
Bsp143I	GATC	7 cut(s)	120, 337, 1163, 1337, 1430, 1500, 1609
BspACI	CCGC	7 cut(s)	27, 48, 83, 446, 559, 984, 1618
BspANI	GGCC	8 cut(s)	5, 131, 314, 852, 1421, 1701, 1716, 1792
BspCNI	CTCAG	6 cut(s)	170, 199, 508, 860, 1076, 1288
BspEI	TCCGGA	2 cut(s)	211, 1363
BspLI	GGNNCC	4 cut(s)	132, 536, 1078, 1165
BspMAI	CTGCAG	3 cut(s)	547, 859, 1759
BspPI	GGATC	5 cut(s)	128, 332, 1158, 1171, 1345
BspT104I	TTCGAA	1 cut(s)	564
BspT107I	GGYRCC	1 cut(s)	1076
BspTNI	GGTCTC	1 cut(s)	1099
BsrI	ACTGG	8 cut(s)	389, 825, 838, 1179, 1413, 1462, 1543, 1566
BssECI	CCNNGG	5 cut(s)	261, 645, 892, 1721, 1722
BssMI	GATC	7 cut(s)	120, 337, 1163, 1337, 1430, 1500, 1609
BssNAI	GTATAC	1 cut(s)	1185
BssNI	GRCGYC	1 cut(s)	1077
BssT1I	CCWWGG	2 cut(s)	645, 892
Bst1107I	GTATAC	1 cut(s)	1185
Bst2UI	CCWGG	1 cut(s)	1723
Bst4CI	ACNGT	5 cut(s)	682, 905, 1009, 1039, 1110
Bst6I	CTCTTC	2 cut(s)	465, 1781
BstACI	GRCGYC	1 cut(s)	1077
BstBAI	YACGTR	2 cut(s)	716, 1409
BstBI	TTCGAA	1 cut(s)	564
BstC8I	GCNNGC	2 cut(s)	1703, 1794
BstF5I	GGATG	9 cut(s)	44, 289, 367, 622, 637, 669, 697, 1243, 1381
BstH2I	RGCGCY	2 cut(s)	221, 1080
BstHHI	GCGC	2 cut(s)	220, 1079
BstKTI	GATC	7 cut(s)	123, 340, 1166, 1340, 1433, 1503, 1612
BstMAI	GTCTC	2 cut(s)	1099, 1580
BstMBI	GATC	7 cut(s)	120, 337, 1163, 1337, 1430, 1500, 1609
BstMCI	CGRYCG	1 cut(s)	64
BstMWI	GCNNNNNNNGC	5 cut(s)	505, 684, 866, 948, 1085
BstNI	CCWGG	1 cut(s)	1723
BstNSI	RCATGY	1 cut(s)	1597
BstSCI	CCNGG	3 cut(s)	63, 260, 1721
BstSFI	CTRYAG	4 cut(s)	543, 855, 1035, 1755
BstSNI	TACGTA	1 cut(s)	716
BstV1I	GCAGC	7 cut(s)	492, 529, 557, 707, 869, 874, 1618
BstV2I	GAAGAC	4 cut(s)	303, 317, 834, 1241
BstX2I	RGATCY	3 cut(s)	1163, 1337, 1500
BstYI	RGATCY	3 cut(s)	1163, 1337, 1500
BstZ17I	GTATAC	1 cut(s)	1185
Bsu36I	CCTNAGG	1 cut(s)	847
BsuI	GTATCC	1 cut(s)	250
BsuRI	GGCC	8 cut(s)	5, 131, 314, 852, 1421, 1701, 1716, 1792
BtgZI	GCGATG	2 cut(s)	1011, 1612
BtsCI	GGATG	9 cut(s)	44, 289, 367, 622, 637, 669, 697, 1243, 1381
BtsIMutI	CAGTG	8 cut(s)	165, 678, 818, 831, 1044, 1128, 1469, 1573
Cac8I	GCNNGC	2 cut(s)	1703, 1794
CaiI	CAGNNNCTG	2 cut(s)	384, 854
CfoI	GCGC	2 cut(s)	220, 1079
Cfr13I	GGNCC	4 cut(s)	130, 851, 1022, 1420
CseI	GACGC	1 cut(s)	50
Csp6I	GTAC	9 cut(s)	58, 382, 829, 1005, 1060, 1314, 1410, 1486, 1664
CviQI	GTAC	9 cut(s)	58, 382, 829, 1005, 1060, 1314, 1410, 1486, 1664
DinI	GGCGCC	1 cut(s)	1078
DpnI	GATC	7 cut(s)	122, 339, 1165, 1339, 1432, 1502, 1611
DpnII	GATC	7 cut(s)	120, 337, 1163, 1337, 1430, 1500, 1609
DraI	TTTAAA	1 cut(s)	1152
DraIII	CACNNNGTG	1 cut(s)	1568
EaeI	YGGCCR	2 cut(s)	3, 1714
Eam1104I	CTCTTC	2 cut(s)	465, 1781
EarI	CTCTTC	2 cut(s)	465, 1781
EciI	GGCGGA	1 cut(s)	37
Ecl136II	GAGCTC	1 cut(s)	1300
Eco105I	TACGTA	1 cut(s)	716
Eco130I	CCWWGG	2 cut(s)	645, 892
Eco147I	AGGCCT	2 cut(s)	1701, 1792
Eco24I	GRGCYC	1 cut(s)	1302
Eco31I	GGTCTC	1 cut(s)	1099
Eco32I	GATATC	2 cut(s)	582, 1219
Eco47I	GGWCC	1 cut(s)	1022
Eco53kI	GAGCTC	1 cut(s)	1300
Eco57I	CTGAAG	3 cut(s)	125, 543, 1104
Eco81I	CCTNAGG	1 cut(s)	847
EcoICRI	GAGCTC	1 cut(s)	1300
EcoO109I	RGGNCCY	2 cut(s)	130, 851
EcoRII	CCWGG	1 cut(s)	1721
EcoRV	GATATC	2 cut(s)	582, 1219
EcoT14I	CCWWGG	2 cut(s)	645, 892
EcoT22I	ATGCAT	2 cut(s)	669, 756
EcoT38I	GRGCYC	1 cut(s)	1302
EgeI	GGCGCC	1 cut(s)	1078
EheI	GGCGCC	1 cut(s)	1078
ErhI	CCWWGG	2 cut(s)	645, 892
FalI	AAGNNNNNCTT	2 cut(s)	358, 390
FaqI	GGGAC	2 cut(s)	1096, 1704
FauI	CCCGC	1 cut(s)	977
FauNDI	CATATG	3 cut(s)	964, 1399, 1494
FblI	GTMKAC	1 cut(s)	1184
Fnu4HI	GCNGC	8 cut(s)	27, 506, 543, 546, 696, 858, 888, 1632
FokI	GGATG	9 cut(s)	31, 296, 374, 624, 629, 676, 704, 1250, 1388
FriOI	GRGCYC	1 cut(s)	1302
Fsp4HI	GCNGC	8 cut(s)	27, 506, 543, 546, 696, 858, 888, 1632
FspBI	CTAG	1 cut(s)	1055
GlaI	GCGC	2 cut(s)	219, 1078
GluI	GCNGC	8 cut(s)	27, 506, 543, 546, 696, 858, 888, 1632
GsuI	CTGGAG	1 cut(s)	855
HaeII	RGCGCY	2 cut(s)	221, 1080
HaeIII	GGCC	8 cut(s)	5, 131, 314, 852, 1421, 1701, 1716, 1792
HapII	CCGG	5 cut(s)	64, 212, 254, 261, 1364
HgaI	GACGC	1 cut(s)	50
HhaI	GCGC	2 cut(s)	220, 1079
Hin1I	GRCGYC	1 cut(s)	1077
Hin6I	GCGC	2 cut(s)	218, 1077
HinP1I	GCGC	2 cut(s)	218, 1077
HindIII	AAGCTT	1 cut(s)	1731
HinfI	GANTC	4 cut(s)	184, 391, 1528, 1558
HpaII	CCGG	5 cut(s)	64, 212, 254, 261, 1364
HphI	GGTGA	2 cut(s)	1619, 1739
Hpy166II	GTNNAC	4 cut(s)	831, 1060, 1185, 1355
Hpy188I	TCNGA	6 cut(s)	105, 579, 1225, 1342, 1430, 1447
Hpy188III	TCNNGA	7 cut(s)	212, 248, 395, 873, 1364, 1471, 1507
Hpy8I	GTNNAC	4 cut(s)	831, 1060, 1185, 1355
Hpy99I	CGWCG	1 cut(s)	44
HpyAV	CCTTC	7 cut(s)	325, 563, 736, 936, 1128, 1470, 1504
HpyCH4III	ACNGT	5 cut(s)	682, 905, 1009, 1039, 1110
HpyCH4IV	ACGT	2 cut(s)	715, 1408
HpyF10VI	GCNNNNNNNGC	5 cut(s)	505, 684, 866, 948, 1085
HpySE526I	ACGT	2 cut(s)	715, 1408
Hsp92I	GRCGYC	1 cut(s)	1077
HspAI	GCGC	2 cut(s)	218, 1077
KasI	GGCGCC	1 cut(s)	1076
Kpn2I	TCCGGA	2 cut(s)	211, 1363
Kzo9I	GATC	7 cut(s)	120, 337, 1163, 1337, 1430, 1500, 1609
LmnI	GCTCC	4 cut(s)	85, 422, 448, 1305
Lsp1109I	GCAGC	7 cut(s)	492, 529, 557, 707, 869, 874, 1618
LweI	GCATC	9 cut(s)	53, 352, 508, 654, 682, 988, 1451, 1476, 1805
MaeI	CTAG	1 cut(s)	1055
MaeII	ACGT	2 cut(s)	715, 1408
MaeIII	GTNAC	4 cut(s)	395, 1453, 1525, 1600
MalI	GATC	7 cut(s)	122, 339, 1165, 1339, 1432, 1502, 1611
MboI	GATC	7 cut(s)	120, 337, 1163, 1337, 1430, 1500, 1609
MfeI	CAATTG	3 cut(s)	861, 1026, 1332
MflI	RGATCY	3 cut(s)	1163, 1337, 1500
MhlI	GDGCHC	3 cut(s)	453, 1302, 1573
MlsI	TGGCCA	1 cut(s)	5
MluNI	TGGCCA	1 cut(s)	5
Mly113I	GGCGCC	1 cut(s)	1077
MlyI	GAGTC	2 cut(s)	178, 1522
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	2 cut(s)	669, 756
MroI	TCCGGA	2 cut(s)	211, 1363
MroXI	GAANNNNTTC	1 cut(s)	110
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	5 cut(s)	354, 953, 1151, 1197, 1575
Msp20I	TGGCCA	1 cut(s)	5
MspI	CCGG	5 cut(s)	64, 212, 254, 261, 1364
MspR9I	CCNGG	3 cut(s)	65, 262, 1723
MunI	CAATTG	3 cut(s)	861, 1026, 1332
Mva1269I	GAATGC	1 cut(s)	1207
MvaI	CCWGG	1 cut(s)	1723
MwoI	GCNNNNNNNGC	5 cut(s)	505, 684, 866, 948, 1085
NarI	GGCGCC	1 cut(s)	1077
NciI	CCSGG	2 cut(s)	65, 262
NdeI	CATATG	3 cut(s)	964, 1399, 1494
NdeII	GATC	7 cut(s)	120, 337, 1163, 1337, 1430, 1500, 1609
NlaIV	GGNNCC	4 cut(s)	132, 536, 1078, 1165
NmeAIII	GCCGAG	1 cut(s)	55
NmuCI	GTSAC	2 cut(s)	395, 1525
NsiI	ATGCAT	2 cut(s)	669, 756
NspI	RCATGY	1 cut(s)	1597
NspV	TTCGAA	1 cut(s)	564
PasI	CCCWGGG	1 cut(s)	1722
PceI	AGGCCT	2 cut(s)	1701, 1792
PcsI	WCGNNNNNNNCGW	3 cut(s)	48, 120, 600
PctI	GAATGC	1 cut(s)	1207
PdmI	GAANNNNTTC	1 cut(s)	110
PfeI	GAWTC	2 cut(s)	391, 1558
PflMI	CCANNNNNTGG	3 cut(s)	794, 820, 1495
PkrI	GCNGC	8 cut(s)	28, 507, 544, 547, 697, 859, 889, 1633
PleI	GAGTC	2 cut(s)	178, 1522
PluTI	GGCGCC	1 cut(s)	1080
PpsI	GAGTC	2 cut(s)	178, 1522
Ppu21I	YACGTR	2 cut(s)	716, 1409
Psp124BI	GAGCTC	1 cut(s)	1302
Psp6I	CCWGG	1 cut(s)	1721
PspGI	CCWGG	1 cut(s)	1721
PspN4I	GGNNCC	4 cut(s)	132, 536, 1078, 1165
PspPI	GGNCC	4 cut(s)	130, 851, 1022, 1420
PstI	CTGCAG	3 cut(s)	547, 859, 1759
PstNI	CAGNNNCTG	2 cut(s)	384, 854
PsuI	RGATCY	3 cut(s)	1163, 1337, 1500
RsaI	GTAC	9 cut(s)	59, 383, 830, 1006, 1061, 1315, 1411, 1487, 1665
RsaNI	GTAC	9 cut(s)	58, 382, 829, 1005, 1060, 1314, 1410, 1486, 1664
SacI	GAGCTC	1 cut(s)	1302
SaqAI	TTAA	5 cut(s)	354, 953, 1151, 1197, 1575
SatI	GCNGC	8 cut(s)	27, 506, 543, 546, 696, 858, 888, 1632
Sau3AI	GATC	7 cut(s)	120, 337, 1163, 1337, 1430, 1500, 1609
Sau96I	GGNCC	4 cut(s)	130, 851, 1022, 1420
SchI	GAGTC	2 cut(s)	178, 1522
ScrFI	CCNGG	3 cut(s)	65, 262, 1723
SduI	GDGCHC	3 cut(s)	453, 1302, 1573
SfaNI	GCATC	9 cut(s)	53, 352, 508, 654, 682, 988, 1451, 1476, 1805
SfcI	CTRYAG	4 cut(s)	543, 855, 1035, 1755
SfoI	GGCGCC	1 cut(s)	1078
SfuI	TTCGAA	1 cut(s)	564
SinI	GGWCC	1 cut(s)	1022
SmlI	CTYRAG	1 cut(s)	246
SmoI	CTYRAG	1 cut(s)	246
SnaBI	TACGTA	1 cut(s)	716
SseBI	AGGCCT	2 cut(s)	1701, 1792
SsiI	CCGC	7 cut(s)	27, 48, 83, 446, 559, 984, 1618
SspDI	GGCGCC	1 cut(s)	1076
SspMI	CTAG	1 cut(s)	1055
SstI	GAGCTC	1 cut(s)	1302
StuI	AGGCCT	2 cut(s)	1701, 1792
StyD4I	CCNGG	3 cut(s)	63, 260, 1721
StyI	CCWWGG	2 cut(s)	645, 892
TaaI	ACNGT	5 cut(s)	682, 905, 1009, 1039, 1110
TaiI	ACGT	2 cut(s)	718, 1411
TaqI	TCGA	6 cut(s)	39, 276, 564, 707, 1256, 1515
TatI	WGTACW	1 cut(s)	1059
TauI	GCSGC	1 cut(s)	29
TfiI	GAWTC	2 cut(s)	391, 1558
Tru1I	TTAA	5 cut(s)	354, 953, 1151, 1197, 1575
Tru9I	TTAA	5 cut(s)	354, 953, 1151, 1197, 1575
TscAI	CASTG	8 cut(s)	165, 685, 825, 838, 1044, 1128, 1469, 1573
TseFI	GTSAC	2 cut(s)	395, 1525
TseI	GCWGC	7 cut(s)	505, 542, 545, 695, 857, 887, 1631
Tsp45I	GTSAC	2 cut(s)	395, 1525
TspDTI	ATGAA	3 cut(s)	1158, 1320, 1790
TspGWI	ACGGA	3 cut(s)	630, 908, 985
TspRI	CASTG	8 cut(s)	165, 685, 825, 838, 1044, 1128, 1469, 1573
Van91I	CCANNNNNTGG	3 cut(s)	794, 820, 1495
VpaK11BI	GGWCC	1 cut(s)	1022
XapI	RAATTY	1 cut(s)	236
XceI	RCATGY	1 cut(s)	1597
XmiI	GTMKAC	1 cut(s)	1184
XmnI	GAANNNNTTC	1 cut(s)	110
XspI	CTAG	1 cut(s)	1055
Zsp2I	ATGCAT	2 cut(s)	669, 756

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.