Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0005375

Physical Location & Seq

Genomic Coordinates Reverse (-)

26834787 .. 26844657

Gene Structure 9871 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG167800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1758 bp

ATGAAACCCACAATCATCTGCTCTCAACAACCTTCACCATCTCCGAAGACTATTTGGTTCCCAATACAGAAAGTTGATCAGAACAGTTTTGAGCCTTTTGGGTTGCAGGTGAAAATGGCCAAGAAGCGTGTCATGGTTCCCGCCGAGAACATCGACCTGTCCGCCGTTAAATACCAGCAGGAAGAAATCAAGGCTCCGCATTTGACGGGTTTCTTTCTTAAGTTGTTTGTATGGATTGTTGAGGCCCCCATTATTGGTTCTTTGATAATCTCAGTGTTGAAGAAGCAGAATAAGATGACTCAGTTATTGAGGAACACTGAGATTCCAGAAGCACCCATGTTCAAACCTGAATTTCCTCCCCAAGAACCAGAAACCGGGGTTGTTGTTGTGGATGAGGATGGAAAACCAGAAGACAGAGTTGGAGTGGCCTTGAAATGTCTTCCAAACTATGATCCTGCTACGTGTTTGAGTGGGGAAGCAAGTCTATCTTTCCGGTACTGGAAGATTCGCGATTATGCTTATGCTTATCGGTCCAAGATTGCAACCCCATCTATGGTTGCAGAGCACATTATTTCAGCTTTAGAAGAATTCAGCAATAAGAAACCTCCTCAACCTTTGTTGCTATCTTTTGACGCTAAAGAATTGAGGAACCAAGCTGCAGCTTCAACAAAGCGGTTTGAGGAAGGCAATCCGATATCTGTCTTAGATGGGATTTTCGTGGCAATCAAGGATGATATAGACTGCTGTCCTCATCCGTCCAAGGGTGGAACAACATGGGTGCATGAGGTTCGCACTGTCAGTAGGGATGCAGTTTGTGTTTCAAAGTTGCGTAGTTGTGGTGTGATTTTTATTGGGAAAGCAAATATGCATGAGATGGGCATGGGTACAACTGGAAATAATCCAAATTATGGAACAACAAGAAATCCCCATGCACCAGACAGGTATACAGGAGGGTCTTCCTCTGGCCCAGCAGCAATTGTAGCATCTGGACTATGCTCTGCTGCCCTTGGAACTGACGGTGGAGGTTCAATCCGTATTCCTTCTTCGCTCTGTGGCGTAGTGGGTTTCAAGACAACATATGGACGGACTGATATAGGAGGGGCATTATGTGATTCTGGCACTGTGGAAATTATTGGACCAATTGCTTCTACAGTGGAGGATGTTATTCTAGTGTACTCAGCTATTTTGGGCGCCTCTCTTGCAGATAGAATTTGTTTGAAACCGTCCCCAGCTTCTGTGCCAGATTTGTCATTATATGAAAGTTTGAATGTTCTGGGATCCTTGCGACTGGGGAAATATACAGAGTGGTTTAACGACGTGCATTCAACTGATATCTCTGATAAGTGTGAGGATGTTCTTAGTCTTCTATCAAAAAATCACGGTTGCGAAATTGTGGAAATTGTTATACCTGAGCTCCATGAAATGCGCACTGCTCATCTTGTTTCAATTGGATCTGAATGTGCCAGTTCACTTAGTCCGGATTGTGAGGATGGAAATGGTGTGAAGTTGACATATGATACACGGACTAGTATGGCCCTGTTCCAATCATTTTCTGCGGCAGACTATGTTACTGCCCAGTGTTTTAGGAGAAGGATTATGTACCATCATATGGAAATCTTCAAGAAGGTTGATGTGATAGTGACTCCCACAACTGGCATGACAGCACCCAAAATTCCACCTAGTGCTCTTAAAGATGGGGAGACAGACATGCAGGTTACAGGTCTGCAGTTCAATTTGATTTGCATCTTGACAGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005783 GO:0005794 GO:0005886 GO:0006066 GO:0006576 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009308 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0012505 GO:0016020 GO:0016787 GO:0016810 GO:0016811 GO:0031090 GO:0034308 GO:0034641 GO:0042439 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044106 GO:0044237 GO:0044281 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0047412 GO:0050896 GO:0051704 GO:0051707 GO:0070291 GO:0071704 GO:0071944 GO:0098542 GO:0098588 GO:0098805 GO:1901564 GO:1901615

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Amidase

Protein Analysis

585

Amino Acids

63.68

Weight (kDa)

5.82

Isoelectric Point (pI)

40.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Amidase	PF01425	208 - 559	2.4e-68	Amidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005375)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64440
fragaria_vesca	FvH4_2g11120 FvH4_2g11120 FvH4_2g11120 FvH4_2g11120 FvH4_2g11120 FvH4_2g11120 FvH4_2g11120 FvH4_2g11120 FvH4_2g11120
malus_domestica	MD05G1050200.v1.1
prunus_persica	Prupe.8G076300_v2.0.a1 Prupe.8G076300_v2.0.a1 Prupe.8G076300_v2.0.a1 Prupe.8G076300_v2.0.a1
pyrus_communis	pycom05g04210
rosa_chinensis	RchiOBHm_Chr6g0269381
rosa_laevigata	RLG00000013854
rosa_multiflora	Rmu_sc0003735.1_g000029 Rmu_sc0015769.1_g000001 Rmu_ssc0000291.1_g000010
rosa_roxburghii	Rroxscaffold_7G00198770
rosa_rugosa	Rorug06G0047400
rosa_samantha	Rh6AG167800 Rh6AG331500 Rh6BG173100 Rh6CG167200 Rh6DG159000
rosa_wichuraiana	Rw6G028780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	97
Acc16I	TGCGCA	1 cut(s)	1427
Acc36I	ACCTGC	2 cut(s)	97, 1702
AccB1I	GGYRCC	1 cut(s)	1190
AccB7I	CCANNNNNTGG	2 cut(s)	908, 1609
AccI	GTMKAC	1 cut(s)	944
AccII	CGCG	1 cut(s)	510
AccIII	TCCGGA	1 cut(s)	1477
AciI	CCGC	5 cut(s)	141, 162, 197, 673, 1556
AclWI	GGATC	4 cut(s)	446, 1272, 1285, 1459
AcoI	YGGCCR	1 cut(s)	117
AcsI	RAATTY	4 cut(s)	350, 587, 1209, 1671
AcyI	GRCGYC	1 cut(s)	1191
AdeI	CACNNNGTG	1 cut(s)	1682
AfaI	GTAC	4 cut(s)	497, 886, 1175, 1601
AfiI	CCNNNNNNNGG	7 cut(s)	254, 374, 553, 761, 908, 1609, 1652
AflII	CTTAAG	1 cut(s)	218
AflIII	ACRYGT	1 cut(s)	461
AhlI	ACTAGT	1 cut(s)	1526
AjiI	CACGTC	1 cut(s)	1318
AjuI	GAANNNNNNNTTGG	2 cut(s)	402, 434
AluBI	AGCT	6 cut(s)	578, 656, 662, 1181, 1232, 1414
AluI	AGCT	6 cut(s)	578, 656, 662, 1181, 1232, 1414
Alw21I	GWGCWC	3 cut(s)	567, 1416, 1687
Alw26I	GTCTC	1 cut(s)	1694
AlwI	GGATC	4 cut(s)	446, 1272, 1285, 1459
AlwNI	CAGNNNCTG	1 cut(s)	1235
Aor13HI	TCCGGA	1 cut(s)	1477
AoxI	GGCC	5 cut(s)	117, 243, 426, 964, 1533
ApeKI	GCWGC	4 cut(s)	656, 659, 971, 1001
ApoI	RAATTY	4 cut(s)	350, 587, 1209, 1671
AspLEI	GCGC	2 cut(s)	1193, 1428
AspS9I	GGNCC	5 cut(s)	244, 531, 965, 1136, 1534
AsuC2I	CCSGG	1 cut(s)	376
AsuHPI	GGTGA	2 cut(s)	27, 121
AvaII	GGWCC	2 cut(s)	531, 1136
BalI	TGGCCA	1 cut(s)	119
BamHI	GGATCC	1 cut(s)	1277
BanI	GGYRCC	1 cut(s)	1190
BanII	GRGCYC	1 cut(s)	1416
BarI	GAAGNNNNNNTAC	2 cut(s)	1027, 1059
BbsI	GAAGAC	5 cut(s)	53, 417, 431, 948, 1355
Bbv12I	GWGCWC	3 cut(s)	567, 1416, 1687
BbvI	GCAGC	4 cut(s)	643, 671, 983, 988
BccI	CCATC	8 cut(s)	46, 392, 556, 701, 868, 1484, 1611, 1688
BceAI	ACGGC	1 cut(s)	149
BcgI	CGANNNNNNTGC	2 cut(s)	770, 804
BclI	TGATCA	1 cut(s)	76
BcnI	CCSGG	1 cut(s)	376
BcoDI	GTCTC	1 cut(s)	1694
BcuI	ACTAGT	1 cut(s)	1526
BfaI	CTAG	3 cut(s)	1169, 1527, 1680
BfmI	CTRYAG	3 cut(s)	657, 1149, 1724
BfoI	RGCGCY	1 cut(s)	1194
BfrI	CTTAAG	1 cut(s)	218
BfuAI	ACCTGC	2 cut(s)	97, 1702
BisI	GCNGC	5 cut(s)	657, 660, 972, 1002, 1557
BlsI	GCNGC	5 cut(s)	658, 661, 973, 1003, 1558
Bme1390I	CCNGG	1 cut(s)	376
Bme18I	GGWCC	2 cut(s)	531, 1136
BmgBI	CACGTC	1 cut(s)	1318
BmgT120I	GGNCC	5 cut(s)	244, 531, 965, 1136, 1534
BmiI	GGNNCC	7 cut(s)	59, 138, 195, 246, 650, 1192, 1279
BmrFI	CCNGG	1 cut(s)	376
BmrI	ACTGGG	2 cut(s)	1298, 1570
BmsI	GCATC	3 cut(s)	796, 992, 1752
BmuI	ACTGGG	2 cut(s)	1298, 1570
BoxI	GACNNNNGTC	1 cut(s)	744
BpiI	GAAGAC	5 cut(s)	53, 417, 431, 948, 1355
Bpu10I	CCTNAGC	1 cut(s)	1410
BpuMI	CCSGG	1 cut(s)	376
BsaAI	YACGTR	1 cut(s)	462
BsaBI	GATNNNNATC	1 cut(s)	1742
BsaHI	GRCGYC	1 cut(s)	1191
BsaJI	CCNNGG	3 cut(s)	375, 759, 1006
BsaWI	WCCGGW	2 cut(s)	492, 1477
BsaXI	ACNNNNNCTCC	2 cut(s)	1398, 1428
Bsc4I	CCNNNNNNNGG	7 cut(s)	254, 374, 553, 761, 908, 1609, 1652
Bse1I	ACTGG	6 cut(s)	503, 895, 1293, 1464, 1576, 1657
Bse8I	GATNNNNATC	1 cut(s)	1742
BseAI	TCCGGA	1 cut(s)	1477
BseDI	CCNNGG	3 cut(s)	375, 759, 1006
BseGI	GGATG	8 cut(s)	397, 403, 736, 751, 811, 1165, 1357, 1495
BseJI	GATNNNNATC	1 cut(s)	1742
BseLI	CCNNNNNNNGG	7 cut(s)	254, 374, 553, 761, 908, 1609, 1652
BseMII	CTCAG	5 cut(s)	285, 309, 314, 1191, 1401
BseNI	ACTGG	6 cut(s)	503, 895, 1293, 1464, 1576, 1657
BseRI	GAGGAG	1 cut(s)	597
BseXI	GCAGC	4 cut(s)	643, 671, 983, 988
BseYI	CCCAGC	2 cut(s)	967, 1228
Bsh1236I	CGCG	1 cut(s)	510
BshFI	GGCC	5 cut(s)	119, 245, 428, 966, 1535
BshNI	GGYRCC	1 cut(s)	1190
BsiHKAI	GWGCWC	3 cut(s)	567, 1416, 1687
BsiSI	CCGG	3 cut(s)	375, 493, 1478
BslFI	GGGAC	1 cut(s)	1210
BslI	CCNNNNNNNGG	7 cut(s)	254, 374, 553, 761, 908, 1609, 1652
BsmAI	GTCTC	1 cut(s)	1694
BsmFI	GGGAC	1 cut(s)	1210
BsmI	GAATGC	1 cut(s)	1321
BsnI	GGCC	5 cut(s)	119, 245, 428, 966, 1535
Bsp1286I	GDGCHC	3 cut(s)	567, 1416, 1687
Bsp13I	TCCGGA	1 cut(s)	1477
Bsp143I	GATC	4 cut(s)	76, 451, 1277, 1451
Bsp68I	TCGCGA	1 cut(s)	510
BspACI	CCGC	5 cut(s)	141, 162, 197, 673, 1556
BspANI	GGCC	5 cut(s)	119, 245, 428, 966, 1535
BspCNI	CTCAG	5 cut(s)	284, 310, 313, 1190, 1402
BspEI	TCCGGA	1 cut(s)	1477
BspFNI	CGCG	1 cut(s)	510
BspLI	GGNNCC	7 cut(s)	59, 138, 195, 246, 650, 1192, 1279
BspMAI	CTGCAG	2 cut(s)	661, 1728
BspMI	ACCTGC	2 cut(s)	97, 1702
BspPI	GGATC	4 cut(s)	446, 1272, 1285, 1459
BspT107I	GGYRCC	1 cut(s)	1190
BspTI	CTTAAG	1 cut(s)	218
BsrI	ACTGG	6 cut(s)	503, 895, 1293, 1464, 1576, 1657
BssECI	CCNNGG	3 cut(s)	375, 759, 1006
BssMI	GATC	4 cut(s)	76, 451, 1277, 1451
BssNAI	GTATAC	1 cut(s)	945
BssNI	GRCGYC	1 cut(s)	1191
BssT1I	CCWWGG	2 cut(s)	759, 1006
Bst1107I	GTATAC	1 cut(s)	945
Bst4CI	ACNGT	7 cut(s)	86, 796, 1019, 1123, 1153, 1224, 1382
BstACI	GRCGYC	1 cut(s)	1191
BstAFI	CTTAAG	1 cut(s)	218
BstBAI	YACGTR	1 cut(s)	462
BstDEI	CTNAG	8 cut(s)	271, 300, 318, 703, 1177, 1358, 1410, 1472
BstF5I	GGATG	8 cut(s)	397, 403, 736, 751, 811, 1165, 1357, 1495
BstFNI	CGCG	1 cut(s)	510
BstH2I	RGCGCY	1 cut(s)	1194
BstHHI	GCGC	2 cut(s)	1193, 1428
BstKTI	GATC	4 cut(s)	79, 454, 1280, 1454
BstMAI	GTCTC	1 cut(s)	1694
BstMBI	GATC	4 cut(s)	76, 451, 1277, 1451
BstMWI	GCNNNNNNNGC	2 cut(s)	980, 1199
BstNSI	RCATGY	1 cut(s)	1711
BstPAI	GACNNNNGTC	1 cut(s)	744
BstSCI	CCNGG	1 cut(s)	374
BstSFI	CTRYAG	3 cut(s)	657, 1149, 1724
BstUI	CGCG	1 cut(s)	510
BstV1I	GCAGC	4 cut(s)	643, 671, 983, 988
BstV2I	GAAGAC	5 cut(s)	53, 417, 431, 948, 1355
BstX2I	RGATCY	2 cut(s)	1277, 1451
BstYI	RGATCY	2 cut(s)	1277, 1451
BstZ17I	GTATAC	1 cut(s)	945
BsuRI	GGCC	5 cut(s)	119, 245, 428, 966, 1535
BtrI	CACGTC	1 cut(s)	1318
BtsCI	GGATG	8 cut(s)	397, 403, 736, 751, 811, 1165, 1357, 1495
BtsI	GCAGTG	1 cut(s)	1428
BtsIMutI	CAGTG	7 cut(s)	279, 315, 792, 1119, 1158, 1428, 1583
BtuMI	TCGCGA	1 cut(s)	510
BveI	ACCTGC	2 cut(s)	97, 1702
CaiI	CAGNNNCTG	1 cut(s)	1235
CfoI	GCGC	2 cut(s)	1193, 1428
Cfr13I	GGNCC	5 cut(s)	244, 531, 965, 1136, 1534
CseI	GACGC	1 cut(s)	641
Csp6I	GTAC	4 cut(s)	496, 885, 1174, 1600
CviQI	GTAC	4 cut(s)	496, 885, 1174, 1600
DdeI	CTNAG	8 cut(s)	271, 300, 318, 703, 1177, 1358, 1410, 1472
DinI	GGCGCC	1 cut(s)	1192
DpnI	GATC	4 cut(s)	78, 453, 1279, 1453
DpnII	GATC	4 cut(s)	76, 451, 1277, 1451
DraIII	CACNNNGTG	1 cut(s)	1682
EaeI	YGGCCR	1 cut(s)	117
EciI	GGCGGA	1 cut(s)	151
Ecl136II	GAGCTC	1 cut(s)	1414
Eco130I	CCWWGG	2 cut(s)	759, 1006
Eco24I	GRGCYC	1 cut(s)	1416
Eco32I	GATATC	2 cut(s)	696, 1333
Eco47I	GGWCC	2 cut(s)	531, 1136
Eco53kI	GAGCTC	1 cut(s)	1414
EcoICRI	GAGCTC	1 cut(s)	1414
EcoO109I	RGGNCCY	1 cut(s)	244
EcoRI	GAATTC	1 cut(s)	587
EcoRV	GATATC	2 cut(s)	696, 1333
EcoT14I	CCWWGG	2 cut(s)	759, 1006
EcoT22I	ATGCAT	1 cut(s)	870
EcoT38I	GRGCYC	1 cut(s)	1416
EgeI	GGCGCC	1 cut(s)	1192
EheI	GGCGCC	1 cut(s)	1192
ErhI	CCWWGG	2 cut(s)	759, 1006
FalI	AAGNNNNNCTT	2 cut(s)	472, 504
FaqI	GGGAC	1 cut(s)	1210
FauI	CCCGC	1 cut(s)	148
FauNDI	CATATG	3 cut(s)	1078, 1513, 1608
FbaI	TGATCA	1 cut(s)	76
FblI	GTMKAC	1 cut(s)	944
Fnu4HI	GCNGC	5 cut(s)	657, 660, 972, 1002, 1557
FokI	GGATG	8 cut(s)	404, 410, 738, 743, 818, 1172, 1364, 1502
FriOI	GRGCYC	1 cut(s)	1416
Fsp4HI	GCNGC	5 cut(s)	657, 660, 972, 1002, 1557
FspAI	RTGCGCAY	1 cut(s)	1427
FspBI	CTAG	3 cut(s)	1169, 1527, 1680
FspI	TGCGCA	1 cut(s)	1427
GlaI	GCGC	2 cut(s)	1192, 1427
GluI	GCNGC	5 cut(s)	657, 660, 972, 1002, 1557
GsaI	CCCAGC	2 cut(s)	971, 1232
HaeII	RGCGCY	1 cut(s)	1194
HaeIII	GGCC	5 cut(s)	119, 245, 428, 966, 1535
HapII	CCGG	3 cut(s)	375, 493, 1478
HgaI	GACGC	1 cut(s)	641
HhaI	GCGC	2 cut(s)	1193, 1428
Hin1I	GRCGYC	1 cut(s)	1191
Hin6I	GCGC	2 cut(s)	1191, 1426
HinP1I	GCGC	2 cut(s)	1191, 1426
HincII	GTYRAC	1 cut(s)	1509
HindII	GTYRAC	1 cut(s)	1509
HinfI	GANTC	5 cut(s)	298, 322, 505, 1112, 1642
HpaII	CCGG	3 cut(s)	375, 493, 1478
HphI	GGTGA	2 cut(s)	27, 121
Hpy166II	GTNNAC	4 cut(s)	945, 1174, 1469, 1509
Hpy188I	TCNGA	5 cut(s)	45, 81, 693, 1339, 1456
Hpy188III	TCNNGA	7 cut(s)	326, 509, 987, 1069, 1478, 1621, 1747
Hpy8I	GTNNAC	4 cut(s)	945, 1174, 1469, 1509
Hpy99I	CGWCG	1 cut(s)	1319
HpyAV	CCTTC	5 cut(s)	42, 677, 1050, 1584, 1618
HpyCH4III	ACNGT	7 cut(s)	86, 796, 1019, 1123, 1153, 1224, 1382
HpyCH4IV	ACGT	2 cut(s)	461, 1317
HpyF10VI	GCNNNNNNNGC	2 cut(s)	980, 1199
HpyF3I	CTNAG	8 cut(s)	271, 300, 318, 703, 1177, 1358, 1410, 1472
HpySE526I	ACGT	2 cut(s)	461, 1317
Hsp92I	GRCGYC	1 cut(s)	1191
HspAI	GCGC	2 cut(s)	1191, 1426
KasI	GGCGCC	1 cut(s)	1190
Kpn2I	TCCGGA	1 cut(s)	1477
Ksp22I	TGATCA	1 cut(s)	76
Kzo9I	GATC	4 cut(s)	76, 451, 1277, 1451
LmnI	GCTCC	2 cut(s)	199, 1419
Lsp1109I	GCAGC	4 cut(s)	643, 671, 983, 988
LweI	GCATC	3 cut(s)	796, 992, 1752
MaeI	CTAG	3 cut(s)	1169, 1527, 1680
MaeII	ACGT	2 cut(s)	461, 1317
MaeIII	GTNAC	3 cut(s)	1567, 1639, 1714
MalI	GATC	4 cut(s)	78, 453, 1279, 1453
MboI	GATC	4 cut(s)	76, 451, 1277, 1451
MfeI	CAATTG	3 cut(s)	975, 1140, 1446
MflI	RGATCY	2 cut(s)	1277, 1451
MhlI	GDGCHC	3 cut(s)	567, 1416, 1687
MlsI	TGGCCA	1 cut(s)	119
MluNI	TGGCCA	1 cut(s)	119
Mly113I	GGCGCC	1 cut(s)	1191
MlyI	GAGTC	2 cut(s)	292, 1636
MmeI	TCCRAC	1 cut(s)	400
Mox20I	TGGCCA	1 cut(s)	119
Mph1103I	ATGCAT	1 cut(s)	870
MroI	TCCGGA	1 cut(s)	1477
MscI	TGGCCA	1 cut(s)	119
MseI	TTAA	4 cut(s)	168, 219, 1311, 1689
Msp20I	TGGCCA	1 cut(s)	119
MspCI	CTTAAG	1 cut(s)	218
MspI	CCGG	3 cut(s)	375, 493, 1478
MspR9I	CCNGG	1 cut(s)	376
MunI	CAATTG	3 cut(s)	975, 1140, 1446
Mva1269I	GAATGC	1 cut(s)	1321
MvnI	CGCG	1 cut(s)	510
MwoI	GCNNNNNNNGC	2 cut(s)	980, 1199
NarI	GGCGCC	1 cut(s)	1191
NciI	CCSGG	1 cut(s)	376
NdeI	CATATG	3 cut(s)	1078, 1513, 1608
NdeII	GATC	4 cut(s)	76, 451, 1277, 1451
NlaIV	GGNNCC	7 cut(s)	59, 138, 195, 246, 650, 1192, 1279
NmeAIII	GCCGAG	1 cut(s)	169
NmuCI	GTSAC	1 cut(s)	1639
NruI	TCGCGA	1 cut(s)	510
NsbI	TGCGCA	1 cut(s)	1427
NsiI	ATGCAT	1 cut(s)	870
NspI	RCATGY	1 cut(s)	1711
PaqCI	CACCTGC	1 cut(s)	97
PctI	GAATGC	1 cut(s)	1321
PfeI	GAWTC	3 cut(s)	322, 505, 1112
PflMI	CCANNNNNTGG	2 cut(s)	908, 1609
PkrI	GCNGC	5 cut(s)	658, 661, 973, 1003, 1558
PleI	GAGTC	2 cut(s)	292, 1636
PluTI	GGCGCC	1 cut(s)	1194
PpsI	GAGTC	2 cut(s)	292, 1636
Ppu21I	YACGTR	1 cut(s)	462
PshAI	GACNNNNGTC	1 cut(s)	744
Psp124BI	GAGCTC	1 cut(s)	1416
PspFI	CCCAGC	2 cut(s)	967, 1228
PspN4I	GGNNCC	7 cut(s)	59, 138, 195, 246, 650, 1192, 1279
PspPI	GGNCC	5 cut(s)	244, 531, 965, 1136, 1534
PstI	CTGCAG	2 cut(s)	661, 1728
PstNI	CAGNNNCTG	1 cut(s)	1235
PsuI	RGATCY	2 cut(s)	1277, 1451
RruI	TCGCGA	1 cut(s)	510
RsaI	GTAC	4 cut(s)	497, 886, 1175, 1601
RsaNI	GTAC	4 cut(s)	496, 885, 1174, 1600
SacI	GAGCTC	1 cut(s)	1416
SaqAI	TTAA	4 cut(s)	168, 219, 1311, 1689
SatI	GCNGC	5 cut(s)	657, 660, 972, 1002, 1557
Sau3AI	GATC	4 cut(s)	76, 451, 1277, 1451
Sau96I	GGNCC	5 cut(s)	244, 531, 965, 1136, 1534
SchI	GAGTC	2 cut(s)	292, 1636
ScrFI	CCNGG	1 cut(s)	376
SduI	GDGCHC	3 cut(s)	567, 1416, 1687
SfaNI	GCATC	3 cut(s)	796, 992, 1752
SfcI	CTRYAG	3 cut(s)	657, 1149, 1724
SfoI	GGCGCC	1 cut(s)	1192
SinI	GGWCC	2 cut(s)	531, 1136
SmlI	CTYRAG	1 cut(s)	218
SmoI	CTYRAG	1 cut(s)	218
SpeI	ACTAGT	1 cut(s)	1526
SsiI	CCGC	5 cut(s)	141, 162, 197, 673, 1556
SspDI	GGCGCC	1 cut(s)	1190
SspMI	CTAG	3 cut(s)	1169, 1527, 1680
SstI	GAGCTC	1 cut(s)	1416
StyD4I	CCNGG	1 cut(s)	374
StyI	CCWWGG	2 cut(s)	759, 1006
TaaI	ACNGT	7 cut(s)	86, 796, 1019, 1123, 1153, 1224, 1382
TaiI	ACGT	2 cut(s)	464, 1320
TaqI	TCGA	1 cut(s)	153
TaqII	GACCGA	1 cut(s)	519
TatI	WGTACW	1 cut(s)	1173
TauI	GCSGC	1 cut(s)	1559
TfiI	GAWTC	3 cut(s)	322, 505, 1112
Tru1I	TTAA	4 cut(s)	168, 219, 1311, 1689
Tru9I	TTAA	4 cut(s)	168, 219, 1311, 1689
TscAI	CASTG	7 cut(s)	279, 322, 799, 1126, 1158, 1435, 1583
TseFI	GTSAC	1 cut(s)	1639
TseI	GCWGC	4 cut(s)	656, 659, 971, 1001
Tsp45I	GTSAC	1 cut(s)	1639
TspDTI	ATGAA	3 cut(s)	17, 1272, 1434
TspGWI	ACGGA	4 cut(s)	744, 1022, 1099, 1537
TspRI	CASTG	7 cut(s)	279, 322, 799, 1126, 1158, 1435, 1583
Van91I	CCANNNNNTGG	2 cut(s)	908, 1609
Vha464I	CTTAAG	1 cut(s)	218
VpaK11BI	GGWCC	2 cut(s)	531, 1136
XapI	RAATTY	4 cut(s)	350, 587, 1209, 1671
XceI	RCATGY	1 cut(s)	1711
XmiI	GTMKAC	1 cut(s)	944
XspI	CTAG	3 cut(s)	1169, 1527, 1680
Zsp2I	ATGCAT	1 cut(s)	870

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.