AT5G64667

No description available

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
25850509 .. 25851375
867 bp
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UTR
Exon/CDS
Intron
AT5G64667.1

Sequence Viewer

Length: 288 bp
ATGTCGTCTCGAAACCAAAGATCAAGAATCACCTCTAGTTTCTTCGTCTCCTTCTTCACTAGAACCATTCTTCTTCTTCTCATTCTTCTTCTTGGTTTCTGCAATGGAGCAAGAACAAACACGAACGTCTTCAACTCGAAACCACACAAGAAGCACAACGACGCCGTTTCTTCTTCAACTAAACAGTTCTTGGGGTTCTTGCCACGTCACTTCCCTGTTCCAGCTTCTGGTCCCTCCAGAAAACACAATGATATTGGTTTACTTAGTTGGCATCGATCTTCTCCGTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

95

Amino Acids

10.71

Weight (kDa)

12.0

Isoelectric Point (pI)

65.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014967)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 227
AcyI GRCGYC 1 cut(s) 162
AfiI CCNNNNNNNGG 1 cut(s) 227
AgsI TTSAA 2 cut(s) 133, 177
AjiI CACGTC 1 cut(s) 206
AluBI AGCT 1 cut(s) 224
AluI AGCT 1 cut(s) 224
Alw26I GTCTC 2 cut(s) 12, 52
AlwNI CAGNNNCTG 1 cut(s) 227
Asp700I GAANNNNTTC 1 cut(s) 128
AspS9I GGNCC 1 cut(s) 230
AsuHPI GGTGA 1 cut(s) 22
AvaII GGWCC 1 cut(s) 230
BbsI GAAGAC 1 cut(s) 121
BceAI ACGGC 1 cut(s) 149
BcoDI GTCTC 2 cut(s) 12, 52
BfaI CTAG 2 cut(s) 36, 60
Bme18I GGWCC 1 cut(s) 230
BmgBI CACGTC 1 cut(s) 206
BmgT120I GGNCC 1 cut(s) 230
BmiI GGNNCC 1 cut(s) 232
BmsI GCATC 1 cut(s) 280
BpiI GAAGAC 1 cut(s) 121
BpmI CTGGAG 1 cut(s) 220
Bsa29I ATCGAT 1 cut(s) 274
BsaHI GRCGYC 1 cut(s) 162
Bsc4I CCNNNNNNNGG 1 cut(s) 227
Bse3DI GCAATG 1 cut(s) 109
BseCI ATCGAT 1 cut(s) 274
BseLI CCNNNNNNNGG 1 cut(s) 227
BseMI GCAATG 1 cut(s) 109
BshVI ATCGAT 1 cut(s) 274
BslFI GGGAC 1 cut(s) 216
BslI CCNNNNNNNGG 1 cut(s) 227
BsmAI GTCTC 2 cut(s) 12, 52
BsmBI CGTCTC 2 cut(s) 12, 52
BsmFI GGGAC 1 cut(s) 216
Bsp143I GATC 2 cut(s) 20, 275
BspDI ATCGAT 1 cut(s) 274
BspLI GGNNCC 1 cut(s) 232
BsrDI GCAATG 1 cut(s) 109
BssMI GATC 2 cut(s) 20, 275
BssNI GRCGYC 1 cut(s) 162
Bst4CI ACNGT 1 cut(s) 186
BstACI GRCGYC 1 cut(s) 162
BstDEI CTNAG 1 cut(s) 263
BstKTI GATC 2 cut(s) 23, 278
BstMAI GTCTC 2 cut(s) 12, 52
BstMBI GATC 2 cut(s) 20, 275
BstV2I GAAGAC 1 cut(s) 121
Bsu15I ATCGAT 1 cut(s) 274
BsuTUI ATCGAT 1 cut(s) 274
BtrI CACGTC 1 cut(s) 206
CaiI CAGNNNCTG 1 cut(s) 227
Cfr13I GGNCC 1 cut(s) 230
ClaI ATCGAT 1 cut(s) 274
CseI GACGC 1 cut(s) 170
CviJI RGCY 1 cut(s) 224
CviKI_1 RGCY 1 cut(s) 224
DdeI CTNAG 1 cut(s) 263
DpnI GATC 2 cut(s) 22, 277
DpnII GATC 2 cut(s) 20, 275
Eco47I GGWCC 1 cut(s) 230
Esp3I CGTCTC 2 cut(s) 12, 52
FaqI GGGAC 1 cut(s) 216
FspBI CTAG 2 cut(s) 36, 60
GsuI CTGGAG 1 cut(s) 220
HgaI GACGC 1 cut(s) 170
Hin1I GRCGYC 1 cut(s) 162
HinfI GANTC 1 cut(s) 27
HphI GGTGA 1 cut(s) 22
Hpy166II GTNNAC 1 cut(s) 260
Hpy188III TCNNGA 3 cut(s) 9, 24, 237
Hpy8I GTNNAC 1 cut(s) 260
Hpy99I CGWCG 1 cut(s) 164
HpyAV CCTTC 1 cut(s) 61
HpyCH4III ACNGT 1 cut(s) 186
HpyCH4IV ACGT 2 cut(s) 126, 205
HpyCH4V TGCA 1 cut(s) 102
HpyF3I CTNAG 1 cut(s) 263
HpySE526I ACGT 2 cut(s) 126, 205
Hsp92I GRCGYC 1 cut(s) 162
Kzo9I GATC 2 cut(s) 20, 275
LmnI GCTCC 1 cut(s) 107
LpnPI CCDG 4 cut(s) 213, 228, 234, 250
LweI GCATC 1 cut(s) 280
MaeI CTAG 2 cut(s) 36, 60
MaeII ACGT 2 cut(s) 126, 205
MaeIII GTNAC 1 cut(s) 206
MalI GATC 2 cut(s) 22, 277
MboI GATC 2 cut(s) 20, 275
MnlI CCTC 2 cut(s) 43, 244
MroXI GAANNNNTTC 1 cut(s) 128
NdeII GATC 2 cut(s) 20, 275
NlaIV GGNNCC 1 cut(s) 232
NmuCI GTSAC 1 cut(s) 206
PdmI GAANNNNTTC 1 cut(s) 128
PfeI GAWTC 1 cut(s) 27
PflMI CCANNNNNTGG 1 cut(s) 227
PspN4I GGNNCC 1 cut(s) 232
PspPI GGNCC 1 cut(s) 230
PstNI CAGNNNCTG 1 cut(s) 227
Sau3AI GATC 2 cut(s) 20, 275
Sau96I GGNCC 1 cut(s) 230
SetI ASST 4 cut(s) 35, 129, 208, 226
SfaNI GCATC 1 cut(s) 280
SinI GGWCC 1 cut(s) 230
SspMI CTAG 2 cut(s) 36, 60
TaaI ACNGT 1 cut(s) 186
TaiI ACGT 2 cut(s) 129, 208
TaqI TCGA 3 cut(s) 10, 137, 274
TfiI GAWTC 1 cut(s) 27
TseFI GTSAC 1 cut(s) 206
Tsp45I GTSAC 1 cut(s) 206
TspGWI ACGGA 1 cut(s) 273
Van91I CCANNNNNTGG 1 cut(s) 227
VpaK11BI GGWCC 1 cut(s) 230
XmnI GAANNNNTTC 1 cut(s) 128
XspI CTAG 2 cut(s) 36, 60
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.