OST-HTH Associated domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G09840 AT5G64710 AT5G64710 |
| fragaria_vesca | FvH4_1g23660 |
| malus_domestica | MD01G1017000.v1.1 |
| prunus_persica | Prupe.7G207600_v2.0.a1 |
| pyrus_communis | pycom01g03040 |
| rosa_chinensis | RchiOBHm_Chr2g0119261 |
| rosa_laevigata | RLG00000018460 |
| rosa_multiflora | Rmu_sc0004760.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00124380 |
| rosa_rugosa | Rorug02G0221300 Rorug02G0221300 |
| rosa_samantha | Rh2AG279400 Rh2BG290100 Rh2DG285400 Rh2DG304400 |
| rosa_wichuraiana | Rw2G022220 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 2 cut(s) | 665, 1036 |
| AccBSI | CCGCTC | 3 cut(s) | 128, 1744, 2352 |
| AccI | GTMKAC | 2 cut(s) | 1470, 1519 |
| AccII | CGCG | 6 cut(s) | 36, 73, 78, 80, 500, 548 |
| AccIII | TCCGGA | 1 cut(s) | 1370 |
| AciI | CCGC | 8 cut(s) | 34, 71, 126, 264, 970, 1742, 2015, 2352 |
| AclI | AACGTT | 1 cut(s) | 1965 |
| AclWI | GGATC | 4 cut(s) | 19, 316, 1795, 1808 |
| AcsI | RAATTY | 6 cut(s) | 100, 1954, 2078, 2102, 2129, 2403 |
| AcuI | CTGAAG | 1 cut(s) | 1547 |
| AdeI | CACNNNGTG | 1 cut(s) | 176 |
| AfaI | GTAC | 3 cut(s) | 406, 912, 1752 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 392, 665, 1036, 2178 |
| AflII | CTTAAG | 2 cut(s) | 1295, 1712 |
| AflIII | ACRYGT | 1 cut(s) | 1514 |
| AhlI | ACTAGT | 1 cut(s) | 755 |
| AjnI | CCWGG | 2 cut(s) | 1029, 1504 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 11, 43, 552, 584, 2078, 2110 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1365, 1397 |
| Alw26I | GTCTC | 3 cut(s) | 309, 804, 918 |
| AlwI | GGATC | 4 cut(s) | 19, 316, 1795, 1808 |
| Ama87I | CYCGRG | 1 cut(s) | 2171 |
| Aor13HI | TCCGGA | 1 cut(s) | 1370 |
| ApeKI | GCWGC | 6 cut(s) | 587, 869, 892, 895, 1574, 1577 |
| ApoI | RAATTY | 6 cut(s) | 100, 1954, 2078, 2102, 2129, 2403 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2135, 2167 |
| AseI | ATTAAT | 1 cut(s) | 1647 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 103, 1532 |
| AspLEI | GCGC | 1 cut(s) | 80 |
| AspS9I | GGNCC | 6 cut(s) | 184, 290, 668, 1586, 1724, 2255 |
| AsuC2I | CCSGG | 1 cut(s) | 2216 |
| AsuHPI | GGTGA | 7 cut(s) | 289, 367, 1317, 1400, 1958, 2462, 2516 |
| AsuII | TTCGAA | 2 cut(s) | 2141, 2244 |
| AsuNHI | GCTAGC | 1 cut(s) | 1240 |
| AvaI | CYCGRG | 1 cut(s) | 2171 |
| AvaII | GGWCC | 6 cut(s) | 184, 290, 668, 1586, 1724, 2255 |
| AxyI | CCTNAGG | 1 cut(s) | 861 |
| BaeGI | GKGCMC | 1 cut(s) | 2196 |
| BamHI | GGATCC | 1 cut(s) | 1800 |
| BbsI | GAAGAC | 2 cut(s) | 55, 229 |
| BbvCI | CCTCAGC | 1 cut(s) | 1455 |
| BbvI | GCAGC | 6 cut(s) | 574, 881, 882, 904, 1586, 1589 |
| BccI | CCATC | 9 cut(s) | 263, 302, 308, 659, 995, 1192, 1883, 2317, 2506 |
| BceAI | ACGGC | 2 cut(s) | 205, 251 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1061, 1095 |
| BciT130I | CCWGG | 2 cut(s) | 1031, 1506 |
| BciVI | GTATCC | 2 cut(s) | 867, 2102 |
| BcnI | CCSGG | 1 cut(s) | 2216 |
| BcoDI | GTCTC | 3 cut(s) | 309, 804, 918 |
| BcuI | ACTAGT | 1 cut(s) | 755 |
| BfaI | CTAG | 7 cut(s) | 114, 483, 756, 1241, 1443, 2178, 2511 |
| BfmI | CTRYAG | 1 cut(s) | 2147 |
| BfrI | CTTAAG | 2 cut(s) | 1295, 1712 |
| BfuI | GTATCC | 2 cut(s) | 867, 2102 |
| BglII | AGATCT | 2 cut(s) | 413, 2248 |
| BisI | GCNGC | 7 cut(s) | 71, 588, 870, 893, 896, 1575, 1578 |
| BlpI | GCTNAGC | 1 cut(s) | 1565 |
| BlsI | GCNGC | 7 cut(s) | 72, 589, 871, 894, 897, 1576, 1579 |
| BmcAI | AGTACT | 1 cut(s) | 912 |
| Bme1390I | CCNGG | 3 cut(s) | 1031, 1506, 2216 |
| Bme18I | GGWCC | 6 cut(s) | 184, 290, 668, 1586, 1724, 2255 |
| BmeT110I | CYCGRG | 1 cut(s) | 2171 |
| BmgT120I | GGNCC | 6 cut(s) | 184, 290, 668, 1586, 1724, 2255 |
| BmiI | GGNNCC | 6 cut(s) | 185, 186, 292, 1221, 1802, 2220 |
| BmrFI | CCNGG | 3 cut(s) | 1031, 1506, 2216 |
| BmsI | GCATC | 5 cut(s) | 601, 1354, 1439, 1810, 2157 |
| BmtI | GCTAGC | 1 cut(s) | 1244 |
| BpiI | GAAGAC | 2 cut(s) | 55, 229 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1844, 1876 |
| BpmI | CTGGAG | 3 cut(s) | 316, 444, 2079 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1455 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1565 |
| Bpu14I | TTCGAA | 2 cut(s) | 2141, 2244 |
| BpuEI | CTTGAG | 5 cut(s) | 372, 1155, 1575, 1666, 2506 |
| BpuMI | CCSGG | 1 cut(s) | 2216 |
| BsaJI | CCNNGG | 6 cut(s) | 1029, 1030, 1505, 1884, 2172, 2214 |
| BsaWI | WCCGGW | 3 cut(s) | 91, 1370, 1583 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 392, 665, 1036, 2178 |
| Bse118I | RCCGGY | 1 cut(s) | 41 |
| Bse1I | ACTGG | 3 cut(s) | 367, 1223, 2258 |
| Bse21I | CCTNAGG | 1 cut(s) | 861 |
| Bse3DI | GCAATG | 1 cut(s) | 1576 |
| BseAI | TCCGGA | 1 cut(s) | 1370 |
| BseBI | CCWGG | 2 cut(s) | 1031, 1506 |
| BseDI | CCNNGG | 6 cut(s) | 1029, 1030, 1505, 1884, 2172, 2214 |
| BseGI | GGATG | 6 cut(s) | 260, 528, 616, 1207, 1825, 1894 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 392, 665, 1036, 2178 |
| BseMI | GCAATG | 1 cut(s) | 1576 |
| BseMII | CTCAG | 3 cut(s) | 1446, 1842, 2331 |
| BseNI | ACTGG | 3 cut(s) | 367, 1223, 2258 |
| BseRI | GAGGAG | 2 cut(s) | 693, 1472 |
| BseSI | GKGCMC | 1 cut(s) | 2196 |
| BseXI | GCAGC | 6 cut(s) | 574, 881, 882, 904, 1586, 1589 |
| BsgI | GTGCAG | 1 cut(s) | 601 |
| Bsh1236I | CGCG | 6 cut(s) | 36, 73, 78, 80, 500, 548 |
| Bsh1285I | CGRYCG | 1 cut(s) | 96 |
| BsiEI | CGRYCG | 1 cut(s) | 96 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2171 |
| BsiSI | CCGG | 5 cut(s) | 42, 92, 1371, 1584, 2216 |
| BslFI | GGGAC | 3 cut(s) | 170, 368, 2432 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 392, 665, 1036, 2178 |
| BsmAI | GTCTC | 3 cut(s) | 309, 804, 918 |
| BsmFI | GGGAC | 3 cut(s) | 170, 368, 2432 |
| BsoBI | CYCGRG | 1 cut(s) | 2171 |
| Bsp119I | TTCGAA | 2 cut(s) | 2141, 2244 |
| Bsp1286I | GDGCHC | 1 cut(s) | 2196 |
| Bsp13I | TCCGGA | 1 cut(s) | 1370 |
| Bsp143I | GATC | 8 cut(s) | 11, 81, 321, 413, 1685, 1800, 1994, 2248 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1565 |
| Bsp68I | TCGCGA | 1 cut(s) | 500 |
| BspACI | CCGC | 8 cut(s) | 34, 71, 126, 264, 970, 1742, 2015, 2352 |
| BspCNI | CTCAG | 3 cut(s) | 1447, 1843, 2330 |
| BspEI | TCCGGA | 1 cut(s) | 1370 |
| BspFNI | CGCG | 6 cut(s) | 36, 73, 78, 80, 500, 548 |
| BspHI | TCATGA | 1 cut(s) | 2275 |
| BspLI | GGNNCC | 6 cut(s) | 185, 186, 292, 1221, 1802, 2220 |
| BspMAI | CTGCAG | 1 cut(s) | 2151 |
| BspOI | GCTAGC | 1 cut(s) | 1244 |
| BspPI | GGATC | 4 cut(s) | 19, 316, 1795, 1808 |
| BspT104I | TTCGAA | 2 cut(s) | 2141, 2244 |
| BspTI | CTTAAG | 2 cut(s) | 1295, 1712 |
| BsrBI | CCGCTC | 3 cut(s) | 128, 1744, 2352 |
| BsrDI | GCAATG | 1 cut(s) | 1576 |
| BsrFI | RCCGGY | 1 cut(s) | 41 |
| BsrI | ACTGG | 3 cut(s) | 367, 1223, 2258 |
| BssAI | RCCGGY | 1 cut(s) | 41 |
| BssECI | CCNNGG | 6 cut(s) | 1029, 1030, 1505, 1884, 2172, 2214 |
| BssMI | GATC | 8 cut(s) | 11, 81, 321, 413, 1685, 1800, 1994, 2248 |
| Bst2UI | CCWGG | 2 cut(s) | 1031, 1506 |
| Bst4CI | ACNGT | 4 cut(s) | 404, 769, 915, 2114 |
| Bst6I | CTCTTC | 6 cut(s) | 32, 55, 359, 476, 711, 1523 |
| BstAFI | CTTAAG | 2 cut(s) | 1295, 1712 |
| BstBI | TTCGAA | 2 cut(s) | 2141, 2244 |
| BstC8I | GCNNGC | 4 cut(s) | 546, 550, 1242, 2436 |
| BstDEI | CTNAG | 9 cut(s) | 795, 861, 1414, 1455, 1497, 1565, 1704, 1851, 2317 |
| BstDSI | CCRYGG | 1 cut(s) | 1884 |
| BstF5I | GGATG | 6 cut(s) | 260, 528, 616, 1207, 1825, 1894 |
| BstFNI | CGCG | 6 cut(s) | 36, 73, 78, 80, 500, 548 |
| BstHHI | GCGC | 1 cut(s) | 80 |
| BstKTI | GATC | 8 cut(s) | 14, 84, 324, 416, 1688, 1803, 1997, 2251 |
| BstMAI | GTCTC | 3 cut(s) | 309, 804, 918 |
| BstMBI | GATC | 8 cut(s) | 11, 81, 321, 413, 1685, 1800, 1994, 2248 |
| BstMCI | CGRYCG | 1 cut(s) | 96 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 356, 1250, 1878 |
| BstNI | CCWGG | 2 cut(s) | 1031, 1506 |
| BstNSI | RCATGY | 1 cut(s) | 1518 |
| BstSCI | CCNGG | 3 cut(s) | 1029, 1504, 2214 |
| BstSFI | CTRYAG | 1 cut(s) | 2147 |
| BstSLI | GKGCMC | 1 cut(s) | 2196 |
| BstUI | CGCG | 6 cut(s) | 36, 73, 78, 80, 500, 548 |
| BstV1I | GCAGC | 6 cut(s) | 574, 881, 882, 904, 1586, 1589 |
| BstV2I | GAAGAC | 2 cut(s) | 55, 229 |
| BstX2I | RGATCY | 4 cut(s) | 11, 413, 1800, 2248 |
| BstYI | RGATCY | 4 cut(s) | 11, 413, 1800, 2248 |
| Bsu36I | CCTNAGG | 1 cut(s) | 861 |
| BsuI | GTATCC | 2 cut(s) | 867, 2102 |
| BtgI | CCRYGG | 1 cut(s) | 1884 |
| BtsCI | GGATG | 6 cut(s) | 260, 528, 616, 1207, 1825, 1894 |
| BtsI | GCAGTG | 2 cut(s) | 303, 589 |
| BtsIMutI | CAGTG | 4 cut(s) | 303, 589, 1848, 2421 |
| BtuMI | TCGCGA | 1 cut(s) | 500 |
| Cac8I | GCNNGC | 4 cut(s) | 546, 550, 1242, 2436 |
| CciI | TCATGA | 1 cut(s) | 2275 |
| CfoI | GCGC | 1 cut(s) | 80 |
| Cfr10I | RCCGGY | 1 cut(s) | 41 |
| Cfr13I | GGNCC | 6 cut(s) | 184, 290, 668, 1586, 1724, 2255 |
| CseI | GACGC | 3 cut(s) | 25, 62, 574 |
| Csp6I | GTAC | 3 cut(s) | 405, 911, 1751 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1948, 1983 |
| CviAII | CATG | 7 cut(s) | 319, 380, 1019, 1079, 1515, 2223, 2276 |
| CviQI | GTAC | 3 cut(s) | 405, 911, 1751 |
| DdeI | CTNAG | 9 cut(s) | 795, 861, 1414, 1455, 1497, 1565, 1704, 1851, 2317 |
| DpnI | GATC | 8 cut(s) | 13, 83, 323, 415, 1687, 1802, 1996, 2250 |
| DpnII | GATC | 8 cut(s) | 11, 81, 321, 413, 1685, 1800, 1994, 2248 |
| DraIII | CACNNNGTG | 1 cut(s) | 176 |
| Eam1104I | CTCTTC | 6 cut(s) | 32, 55, 359, 476, 711, 1523 |
| EarI | CTCTTC | 6 cut(s) | 32, 55, 359, 476, 711, 1523 |
| EciI | GGCGGA | 1 cut(s) | 253 |
| Eco32I | GATATC | 1 cut(s) | 747 |
| Eco47I | GGWCC | 6 cut(s) | 184, 290, 668, 1586, 1724, 2255 |
| Eco57I | CTGAAG | 1 cut(s) | 1547 |
| Eco81I | CCTNAGG | 1 cut(s) | 861 |
| Eco88I | CYCGRG | 1 cut(s) | 2171 |
| EcoO109I | RGGNCCY | 3 cut(s) | 184, 290, 1724 |
| EcoRII | CCWGG | 2 cut(s) | 1029, 1504 |
| EcoRV | GATATC | 1 cut(s) | 747 |
| FaeI | CATG | 7 cut(s) | 322, 383, 1022, 1082, 1518, 2226, 2279 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 2075, 2107, 2445, 2477 |
| FaqI | GGGAC | 3 cut(s) | 170, 368, 2432 |
| FatI | CATG | 7 cut(s) | 318, 379, 1018, 1078, 1514, 2222, 2275 |
| FblI | GTMKAC | 2 cut(s) | 1470, 1519 |
| Fnu4HI | GCNGC | 7 cut(s) | 71, 588, 870, 893, 896, 1575, 1578 |
| FokI | GGATG | 6 cut(s) | 247, 535, 623, 1214, 1832, 1901 |
| Fsp4HI | GCNGC | 7 cut(s) | 71, 588, 870, 893, 896, 1575, 1578 |
| FspBI | CTAG | 7 cut(s) | 114, 483, 756, 1241, 1443, 2178, 2511 |
| GlaI | GCGC | 1 cut(s) | 79 |
| GluI | GCNGC | 7 cut(s) | 71, 588, 870, 893, 896, 1575, 1578 |
| GsuI | CTGGAG | 3 cut(s) | 316, 444, 2079 |
| HapII | CCGG | 5 cut(s) | 42, 92, 1371, 1584, 2216 |
| HgaI | GACGC | 3 cut(s) | 25, 62, 574 |
| HhaI | GCGC | 1 cut(s) | 80 |
| Hin1II | CATG | 7 cut(s) | 322, 383, 1022, 1082, 1518, 2226, 2279 |
| Hin6I | GCGC | 1 cut(s) | 78 |
| HinP1I | GCGC | 1 cut(s) | 78 |
| HincII | GTYRAC | 2 cut(s) | 1520, 2211 |
| HindII | GTYRAC | 2 cut(s) | 1520, 2211 |
| HindIII | AAGCTT | 2 cut(s) | 2334, 2459 |
| HpaII | CCGG | 5 cut(s) | 42, 92, 1371, 1584, 2216 |
| HphI | GGTGA | 7 cut(s) | 289, 367, 1317, 1400, 1958, 2462, 2516 |
| Hpy166II | GTNNAC | 5 cut(s) | 1325, 1471, 1520, 1848, 2211 |
| Hpy8I | GTNNAC | 5 cut(s) | 1325, 1471, 1520, 1848, 2211 |
| Hpy99I | CGWCG | 6 cut(s) | 41, 78, 226, 568, 807, 1670 |
| HpyAV | CCTTC | 4 cut(s) | 1385, 1715, 1737, 1824 |
| HpyCH4III | ACNGT | 4 cut(s) | 404, 769, 915, 2114 |
| HpyCH4IV | ACGT | 2 cut(s) | 1602, 1965 |
| HpyCH4V | TGCA | 9 cut(s) | 4, 230, 582, 1082, 1430, 1478, 1574, 2149, 2438 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 356, 1250, 1878 |
| HpyF3I | CTNAG | 9 cut(s) | 795, 861, 1414, 1455, 1497, 1565, 1704, 1851, 2317 |
| HpySE526I | ACGT | 2 cut(s) | 1602, 1965 |
| Hsp92II | CATG | 7 cut(s) | 322, 383, 1022, 1082, 1518, 2226, 2279 |
| HspAI | GCGC | 1 cut(s) | 78 |
| KflI | GGGWCCC | 1 cut(s) | 184 |
| Kpn2I | TCCGGA | 1 cut(s) | 1370 |
| Kzo9I | GATC | 8 cut(s) | 11, 81, 321, 413, 1685, 1800, 1994, 2248 |
| LmnI | GCTCC | 2 cut(s) | 866, 1937 |
| Lsp1109I | GCAGC | 6 cut(s) | 574, 881, 882, 904, 1586, 1589 |
| LweI | GCATC | 5 cut(s) | 601, 1354, 1439, 1810, 2157 |
| MaeI | CTAG | 7 cut(s) | 114, 483, 756, 1241, 1443, 2178, 2511 |
| MaeII | ACGT | 2 cut(s) | 1602, 1965 |
| MaeIII | GTNAC | 6 cut(s) | 689, 1024, 1837, 1931, 2200, 2504 |
| MalI | GATC | 8 cut(s) | 13, 83, 323, 415, 1687, 1802, 1996, 2250 |
| MbiI | CCGCTC | 3 cut(s) | 128, 1744, 2352 |
| MboI | GATC | 8 cut(s) | 11, 81, 321, 413, 1685, 1800, 1994, 2248 |
| MflI | RGATCY | 4 cut(s) | 11, 413, 1800, 2248 |
| MhlI | GDGCHC | 1 cut(s) | 2196 |
| MlyI | GAGTC | 4 cut(s) | 1510, 2294, 2309, 2501 |
| MmeI | TCCRAC | 2 cut(s) | 76, 659 |
| MroI | TCCGGA | 1 cut(s) | 1370 |
| MroXI | GAANNNNTTC | 2 cut(s) | 103, 1532 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2280 |
| MspA1I | CMGCKG | 1 cut(s) | 895 |
| MspCI | CTTAAG | 2 cut(s) | 1295, 1712 |
| MspI | CCGG | 5 cut(s) | 42, 92, 1371, 1584, 2216 |
| MspR9I | CCNGG | 3 cut(s) | 1031, 1506, 2216 |
| MvaI | CCWGG | 2 cut(s) | 1031, 1506 |
| MvnI | CGCG | 6 cut(s) | 36, 73, 78, 80, 500, 548 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 356, 1250, 1878 |
| NciI | CCSGG | 1 cut(s) | 2216 |
| NdeII | GATC | 8 cut(s) | 11, 81, 321, 413, 1685, 1800, 1994, 2248 |
| NheI | GCTAGC | 1 cut(s) | 1240 |
| NlaIII | CATG | 7 cut(s) | 322, 383, 1022, 1082, 1518, 2226, 2279 |
| NlaIV | GGNNCC | 6 cut(s) | 185, 186, 292, 1221, 1802, 2220 |
| NmuCI | GTSAC | 3 cut(s) | 689, 1931, 2504 |
| NruI | TCGCGA | 1 cut(s) | 500 |
| NspI | RCATGY | 1 cut(s) | 1518 |
| NspV | TTCGAA | 2 cut(s) | 2141, 2244 |
| PagI | TCATGA | 1 cut(s) | 2275 |
| PasI | CCCWGGG | 1 cut(s) | 1030 |
| PciI | ACATGT | 1 cut(s) | 1514 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 552 |
| PdmI | GAANNNNTTC | 2 cut(s) | 103, 1532 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 665, 1036 |
| PkrI | GCNGC | 7 cut(s) | 72, 589, 871, 894, 897, 1576, 1579 |
| PleI | GAGTC | 4 cut(s) | 1509, 2293, 2309, 2501 |
| PpsI | GAGTC | 4 cut(s) | 1509, 2293, 2309, 2501 |
| PpuMI | RGGWCCY | 3 cut(s) | 184, 290, 1724 |
| PscI | ACATGT | 1 cut(s) | 1514 |
| PshBI | ATTAAT | 1 cut(s) | 1647 |
| Psp1406I | AACGTT | 1 cut(s) | 1965 |
| Psp5II | RGGWCCY | 3 cut(s) | 184, 290, 1724 |
| Psp6I | CCWGG | 2 cut(s) | 1029, 1504 |
| PspGI | CCWGG | 2 cut(s) | 1029, 1504 |
| PspN4I | GGNNCC | 6 cut(s) | 185, 186, 292, 1221, 1802, 2220 |
| PspPI | GGNCC | 6 cut(s) | 184, 290, 668, 1586, 1724, 2255 |
| PspPPI | RGGWCCY | 3 cut(s) | 184, 290, 1724 |
| PstI | CTGCAG | 1 cut(s) | 2151 |
| PsuI | RGATCY | 4 cut(s) | 11, 413, 1800, 2248 |
| PvuII | CAGCTG | 1 cut(s) | 895 |
| RruI | TCGCGA | 1 cut(s) | 500 |
| RsaI | GTAC | 3 cut(s) | 406, 912, 1752 |
| RsaNI | GTAC | 3 cut(s) | 405, 911, 1751 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2280 |
| SalI | GTCGAC | 1 cut(s) | 1518 |
| SatI | GCNGC | 7 cut(s) | 71, 588, 870, 893, 896, 1575, 1578 |
| Sau3AI | GATC | 8 cut(s) | 11, 81, 321, 413, 1685, 1800, 1994, 2248 |
| Sau96I | GGNCC | 6 cut(s) | 184, 290, 668, 1586, 1724, 2255 |
| ScaI | AGTACT | 1 cut(s) | 912 |
| SchI | GAGTC | 4 cut(s) | 1510, 2294, 2309, 2501 |
| ScrFI | CCNGG | 3 cut(s) | 1031, 1506, 2216 |
| SduI | GDGCHC | 1 cut(s) | 2196 |
| SfaNI | GCATC | 5 cut(s) | 601, 1354, 1439, 1810, 2157 |
| SfcI | CTRYAG | 1 cut(s) | 2147 |
| SfuI | TTCGAA | 2 cut(s) | 2141, 2244 |
| SinI | GGWCC | 6 cut(s) | 184, 290, 668, 1586, 1724, 2255 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2280 |
| SmlI | CTYRAG | 7 cut(s) | 387, 1170, 1295, 1590, 1681, 1712, 2485 |
| SmoI | CTYRAG | 7 cut(s) | 387, 1170, 1295, 1590, 1681, 1712, 2485 |
| SpeI | ACTAGT | 1 cut(s) | 755 |
| SsiI | CCGC | 8 cut(s) | 34, 71, 126, 264, 970, 1742, 2015, 2352 |
| SspI | AATATT | 1 cut(s) | 2475 |
| SspMI | CTAG | 7 cut(s) | 114, 483, 756, 1241, 1443, 2178, 2511 |
| StyD4I | CCNGG | 3 cut(s) | 1029, 1504, 2214 |
| TaaI | ACNGT | 4 cut(s) | 404, 769, 915, 2114 |
| TaiI | ACGT | 2 cut(s) | 1605, 1968 |
| TaqII | GACCGA | 1 cut(s) | 2243 |
| TatI | WGTACW | 1 cut(s) | 910 |
| TauI | GCSGC | 1 cut(s) | 73 |
| TscAI | CASTG | 4 cut(s) | 310, 589, 1855, 2428 |
| TseFI | GTSAC | 3 cut(s) | 689, 1931, 2504 |
| TseI | GCWGC | 6 cut(s) | 587, 869, 892, 895, 1574, 1577 |
| Tsp45I | GTSAC | 3 cut(s) | 689, 1931, 2504 |
| TspDTI | ATGAA | 8 cut(s) | 1007, 1130, 1205, 1633, 1719, 2226, 2264, 2394 |
| TspGWI | ACGGA | 9 cut(s) | 49, 187, 327, 422, 875, 948, 1302, 1901, 1950 |
| TspRI | CASTG | 4 cut(s) | 310, 589, 1855, 2428 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 665, 1036 |
| Vha464I | CTTAAG | 2 cut(s) | 1295, 1712 |
| VpaK11BI | GGWCC | 6 cut(s) | 184, 290, 668, 1586, 1724, 2255 |
| VspI | ATTAAT | 1 cut(s) | 1647 |
| XapI | RAATTY | 6 cut(s) | 100, 1954, 2078, 2102, 2129, 2403 |
| XceI | RCATGY | 1 cut(s) | 1518 |
| XmiI | GTMKAC | 2 cut(s) | 1470, 1519 |
| XmnI | GAANNNNTTC | 2 cut(s) | 103, 1532 |
| XspI | CTAG | 7 cut(s) | 114, 483, 756, 1241, 1443, 2178, 2511 |
| ZrmI | AGTACT | 1 cut(s) | 912 |