NYN domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G09840 AT5G64710 AT5G64710 |
| fragaria_vesca | FvH4_1g23660 |
| malus_domestica | MD01G1017000.v1.1 |
| prunus_persica | Prupe.7G207600_v2.0.a1 |
| pyrus_communis | pycom01g03040 |
| rosa_chinensis | RchiOBHm_Chr2g0119261 |
| rosa_laevigata | RLG00000018460 |
| rosa_multiflora | Rmu_sc0004760.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00124380 |
| rosa_rugosa | Rorug02G0221300 Rorug02G0221300 |
| rosa_samantha | Rh2AG279400 Rh2BG290100 Rh2DG285400 Rh2DG304400 |
| rosa_wichuraiana | Rw2G022220 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2451 |
| Acc36I | ACCTGC | 1 cut(s) | 2654 |
| Acc65I | GGTACC | 2 cut(s) | 1499, 2349 |
| AccB1I | GGYRCC | 3 cut(s) | 658, 1499, 2349 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 623, 908 |
| AccII | CGCG | 1 cut(s) | 2881 |
| AciI | CCGC | 4 cut(s) | 224, 351, 368, 1030 |
| AclI | AACGTT | 1 cut(s) | 2030 |
| AclWI | GGATC | 3 cut(s) | 1598, 1876, 2665 |
| AcoI | YGGCCR | 2 cut(s) | 183, 646 |
| AcsI | RAATTY | 6 cut(s) | 51, 810, 1382, 1736, 1822, 2693 |
| AcuI | CTGAAG | 4 cut(s) | 1356, 1698, 1955, 2481 |
| AcyI | GRCGYC | 2 cut(s) | 7, 659 |
| AfaI | GTAC | 8 cut(s) | 214, 398, 1377, 1456, 1501, 1611, 2351, 2888 |
| AflIII | ACRYGT | 2 cut(s) | 279, 1568 |
| AhlI | ACTAGT | 3 cut(s) | 1085, 1193, 1457 |
| AjnI | CCWGG | 9 cut(s) | 303, 526, 705, 1036, 1650, 1702, 1895, 2149, 2927 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1308, 1340 |
| Alw21I | GWGCWC | 2 cut(s) | 868, 2777 |
| Alw26I | GTCTC | 9 cut(s) | 114, 381, 411, 447, 1830, 1885, 2057, 2471, 2575 |
| Alw44I | GTGCAC | 1 cut(s) | 864 |
| AlwI | GGATC | 3 cut(s) | 1598, 1876, 2665 |
| Ama87I | CYCGRG | 2 cut(s) | 1753, 2850 |
| AoxI | GGCC | 7 cut(s) | 183, 234, 560, 646, 1304, 1931, 2590 |
| ApaI | GGGCCC | 2 cut(s) | 1308, 2594 |
| ApaLI | GTGCAC | 1 cut(s) | 864 |
| ApeKI | GCWGC | 2 cut(s) | 545, 691 |
| ApoI | RAATTY | 6 cut(s) | 51, 810, 1382, 1736, 1822, 2693 |
| AseI | ATTAAT | 1 cut(s) | 330 |
| Asp718I | GGTACC | 2 cut(s) | 1499, 2349 |
| AspLEI | GCGC | 2 cut(s) | 661, 2883 |
| AspS9I | GGNCC | 9 cut(s) | 234, 251, 626, 1304, 1305, 1893, 1931, 2590, 2591 |
| AsuHPI | GGTGA | 5 cut(s) | 458, 596, 994, 1052, 2565 |
| AsuNHI | GCTAGC | 1 cut(s) | 505 |
| AvaI | CYCGRG | 2 cut(s) | 1753, 2850 |
| AvaII | GGWCC | 3 cut(s) | 251, 626, 1893 |
| BaeGI | GKGCMC | 3 cut(s) | 868, 1308, 2594 |
| BalI | TGGCCA | 1 cut(s) | 648 |
| BanI | GGYRCC | 3 cut(s) | 658, 1499, 2349 |
| BanII | GRGCYC | 3 cut(s) | 1308, 2594, 2777 |
| BbsI | GAAGAC | 3 cut(s) | 675, 2125, 2421 |
| Bbv12I | GWGCWC | 2 cut(s) | 868, 2777 |
| BbvI | GCAGC | 2 cut(s) | 532, 703 |
| BceAI | ACGGC | 1 cut(s) | 237 |
| BciT130I | CCWGG | 9 cut(s) | 305, 528, 707, 1038, 1652, 1704, 1897, 2151, 2929 |
| BciVI | GTATCC | 1 cut(s) | 2864 |
| BclI | TGATCA | 1 cut(s) | 1759 |
| BcoDI | GTCTC | 9 cut(s) | 114, 381, 411, 447, 1830, 1885, 2057, 2471, 2575 |
| BcuI | ACTAGT | 3 cut(s) | 1085, 1193, 1457 |
| BfmI | CTRYAG | 2 cut(s) | 321, 1368 |
| BfoI | RGCGCY | 1 cut(s) | 662 |
| BfuAI | ACCTGC | 1 cut(s) | 2654 |
| BfuI | GTATCC | 1 cut(s) | 2864 |
| BglII | AGATCT | 2 cut(s) | 388, 1946 |
| BisI | GCNGC | 3 cut(s) | 225, 546, 692 |
| BlsI | GCNGC | 3 cut(s) | 226, 547, 693 |
| Bme1390I | CCNGG | 9 cut(s) | 305, 528, 707, 1038, 1652, 1704, 1897, 2151, 2929 |
| Bme18I | GGWCC | 3 cut(s) | 251, 626, 1893 |
| BmeT110I | CYCGRG | 2 cut(s) | 1753, 2850 |
| BmgT120I | GGNCC | 9 cut(s) | 234, 251, 626, 1304, 1305, 1893, 1931, 2590, 2591 |
| BmiI | GGNNCC | 9 cut(s) | 252, 628, 660, 1146, 1306, 1501, 2351, 2457, 2592 |
| BmrFI | CCNGG | 9 cut(s) | 305, 528, 707, 1038, 1652, 1704, 1897, 2151, 2929 |
| BmrI | ACTGGG | 1 cut(s) | 409 |
| BmsI | GCATC | 2 cut(s) | 947, 2726 |
| BmtI | GCTAGC | 1 cut(s) | 509 |
| BmuI | ACTGGG | 1 cut(s) | 409 |
| BpiI | GAAGAC | 3 cut(s) | 675, 2125, 2421 |
| BpmI | CTGGAG | 3 cut(s) | 1512, 1599, 2214 |
| BpuEI | CTTGAG | 3 cut(s) | 947, 1547, 1785 |
| BsaHI | GRCGYC | 2 cut(s) | 7, 659 |
| BsaI | GGTCTC | 1 cut(s) | 381 |
| BsaJI | CCNNGG | 9 cut(s) | 563, 705, 1650, 1703, 1896, 2517, 2576, 2639, 2927 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 299, 329, 2406, 2436 |
| Bse118I | RCCGGY | 2 cut(s) | 181, 209 |
| Bse1I | ACTGG | 7 cut(s) | 404, 766, 968, 1060, 1430, 1607, 2197 |
| BseBI | CCWGG | 9 cut(s) | 305, 528, 707, 1038, 1652, 1704, 1897, 2151, 2929 |
| BseDI | CCNNGG | 9 cut(s) | 563, 705, 1650, 1703, 1896, 2517, 2576, 2639, 2927 |
| BseGI | GGATG | 8 cut(s) | 1210, 1631, 2123, 2416, 2512, 2587, 2681, 2937 |
| BseMII | CTCAG | 5 cut(s) | 678, 780, 1008, 1224, 1341 |
| BseNI | ACTGG | 7 cut(s) | 404, 766, 968, 1060, 1430, 1607, 2197 |
| BseRI | GAGGAG | 3 cut(s) | 24, 140, 2246 |
| BseSI | GKGCMC | 3 cut(s) | 868, 1308, 2594 |
| BseXI | GCAGC | 2 cut(s) | 532, 703 |
| BseYI | CCCAGC | 1 cut(s) | 2587 |
| Bsh1236I | CGCG | 1 cut(s) | 2881 |
| BshFI | GGCC | 7 cut(s) | 185, 236, 562, 648, 1306, 1933, 2592 |
| BshNI | GGYRCC | 3 cut(s) | 658, 1499, 2349 |
| BsiHKAI | GWGCWC | 2 cut(s) | 868, 2777 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1753, 2850 |
| BsiSI | CCGG | 2 cut(s) | 182, 210 |
| BslFI | GGGAC | 4 cut(s) | 173, 290, 612, 2008 |
| BsmAI | GTCTC | 9 cut(s) | 114, 381, 411, 447, 1830, 1885, 2057, 2471, 2575 |
| BsmBI | CGTCTC | 1 cut(s) | 114 |
| BsmFI | GGGAC | 4 cut(s) | 173, 290, 612, 2008 |
| BsmI | GAATGC | 3 cut(s) | 680, 1690, 2021 |
| BsnI | GGCC | 7 cut(s) | 185, 236, 562, 648, 1306, 1933, 2592 |
| Bso31I | GGTCTC | 1 cut(s) | 381 |
| BsoBI | CYCGRG | 2 cut(s) | 1753, 2850 |
| Bsp120I | GGGCCC | 2 cut(s) | 1304, 2590 |
| Bsp1286I | GDGCHC | 4 cut(s) | 868, 1308, 2594, 2777 |
| Bsp1407I | TGTACA | 1 cut(s) | 1375 |
| Bsp143I | GATC | 9 cut(s) | 216, 388, 571, 1603, 1759, 1868, 1946, 1963, 2657 |
| BspACI | CCGC | 4 cut(s) | 224, 351, 368, 1030 |
| BspANI | GGCC | 7 cut(s) | 185, 236, 562, 648, 1306, 1933, 2592 |
| BspCNI | CTCAG | 5 cut(s) | 679, 779, 1009, 1225, 1342 |
| BspFNI | CGCG | 1 cut(s) | 2881 |
| BspHI | TCATGA | 1 cut(s) | 1516 |
| BspLI | GGNNCC | 9 cut(s) | 252, 628, 660, 1146, 1306, 1501, 2351, 2457, 2592 |
| BspMAI | CTGCAG | 1 cut(s) | 1372 |
| BspMI | ACCTGC | 1 cut(s) | 2654 |
| BspOI | GCTAGC | 1 cut(s) | 509 |
| BspPI | GGATC | 3 cut(s) | 1598, 1876, 2665 |
| BspQI | GCTCTTC | 2 cut(s) | 76, 1820 |
| BspT107I | GGYRCC | 3 cut(s) | 658, 1499, 2349 |
| BspTNI | GGTCTC | 1 cut(s) | 381 |
| BsrFI | RCCGGY | 2 cut(s) | 181, 209 |
| BsrGI | TGTACA | 1 cut(s) | 1375 |
| BsrI | ACTGG | 7 cut(s) | 404, 766, 968, 1060, 1430, 1607, 2197 |
| BssAI | RCCGGY | 2 cut(s) | 181, 209 |
| BssECI | CCNNGG | 9 cut(s) | 563, 705, 1650, 1703, 1896, 2517, 2576, 2639, 2927 |
| BssMI | GATC | 9 cut(s) | 216, 388, 571, 1603, 1759, 1868, 1946, 1963, 2657 |
| BssNI | GRCGYC | 2 cut(s) | 7, 659 |
| BssT1I | CCWWGG | 2 cut(s) | 563, 2639 |
| Bst2UI | CCWGG | 9 cut(s) | 305, 528, 707, 1038, 1652, 1704, 1897, 2151, 2929 |
| Bst6I | CTCTTC | 7 cut(s) | 25, 44, 51, 76, 1820, 1896, 2763 |
| BstACI | GRCGYC | 2 cut(s) | 7, 659 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 574 |
| BstAUI | TGTACA | 1 cut(s) | 1375 |
| BstC8I | GCNNGC | 3 cut(s) | 183, 507, 696 |
| BstDEI | CTNAG | 6 cut(s) | 687, 766, 1017, 1233, 1350, 1943 |
| BstDSI | CCRYGG | 2 cut(s) | 2517, 2576 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1299 |
| BstF5I | GGATG | 8 cut(s) | 1210, 1631, 2123, 2416, 2512, 2587, 2681, 2937 |
| BstFNI | CGCG | 1 cut(s) | 2881 |
| BstH2I | RGCGCY | 1 cut(s) | 662 |
| BstHHI | GCGC | 2 cut(s) | 661, 2883 |
| BstKTI | GATC | 9 cut(s) | 219, 391, 574, 1606, 1762, 1871, 1949, 1966, 2660 |
| BstMAI | GTCTC | 9 cut(s) | 114, 381, 411, 447, 1830, 1885, 2057, 2471, 2575 |
| BstMBI | GATC | 9 cut(s) | 216, 388, 571, 1603, 1759, 1868, 1946, 1963, 2657 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 233, 574, 1360 |
| BstNI | CCWGG | 9 cut(s) | 305, 528, 707, 1038, 1652, 1704, 1897, 2151, 2929 |
| BstNSI | RCATGY | 2 cut(s) | 283, 1572 |
| BstSCI | CCNGG | 9 cut(s) | 303, 526, 705, 1036, 1650, 1702, 1895, 2149, 2927 |
| BstSFI | CTRYAG | 2 cut(s) | 321, 1368 |
| BstSLI | GKGCMC | 3 cut(s) | 868, 1308, 2594 |
| BstUI | CGCG | 1 cut(s) | 2881 |
| BstV1I | GCAGC | 2 cut(s) | 532, 703 |
| BstV2I | GAAGAC | 3 cut(s) | 675, 2125, 2421 |
| BstX2I | RGATCY | 2 cut(s) | 388, 1946 |
| BstYI | RGATCY | 2 cut(s) | 388, 1946 |
| BsuI | GTATCC | 1 cut(s) | 2864 |
| BsuRI | GGCC | 7 cut(s) | 185, 236, 562, 648, 1306, 1933, 2592 |
| BtgI | CCRYGG | 2 cut(s) | 2517, 2576 |
| BtgZI | GCGATG | 1 cut(s) | 2703 |
| BtsCI | GGATG | 8 cut(s) | 1210, 1631, 2123, 2416, 2512, 2587, 2681, 2937 |
| BtsIMutI | CAGTG | 3 cut(s) | 370, 684, 1214 |
| BveI | ACCTGC | 1 cut(s) | 2654 |
| Cac8I | GCNNGC | 3 cut(s) | 183, 507, 696 |
| CciI | TCATGA | 1 cut(s) | 1516 |
| CfoI | GCGC | 2 cut(s) | 661, 2883 |
| Cfr10I | RCCGGY | 2 cut(s) | 181, 209 |
| Cfr13I | GGNCC | 9 cut(s) | 234, 251, 626, 1304, 1305, 1893, 1931, 2590, 2591 |
| CseI | GACGC | 1 cut(s) | 15 |
| Csp6I | GTAC | 8 cut(s) | 213, 397, 1376, 1455, 1500, 1610, 2350, 2887 |
| CviAII | CATG | 8 cut(s) | 280, 556, 569, 1517, 1569, 1840, 2156, 2749 |
| CviQI | GTAC | 8 cut(s) | 213, 397, 1376, 1455, 1500, 1610, 2350, 2887 |
| DdeI | CTNAG | 6 cut(s) | 687, 766, 1017, 1233, 1350, 1943 |
| DinI | GGCGCC | 1 cut(s) | 660 |
| DpnI | GATC | 9 cut(s) | 218, 390, 573, 1605, 1761, 1870, 1948, 1965, 2659 |
| DpnII | GATC | 9 cut(s) | 216, 388, 571, 1603, 1759, 1868, 1946, 1963, 2657 |
| EaeI | YGGCCR | 2 cut(s) | 183, 646 |
| Eam1104I | CTCTTC | 7 cut(s) | 25, 44, 51, 76, 1820, 1896, 2763 |
| EarI | CTCTTC | 7 cut(s) | 25, 44, 51, 76, 1820, 1896, 2763 |
| Ecl136II | GAGCTC | 1 cut(s) | 2775 |
| Eco130I | CCWWGG | 2 cut(s) | 563, 2639 |
| Eco24I | GRGCYC | 3 cut(s) | 1308, 2594, 2777 |
| Eco31I | GGTCTC | 1 cut(s) | 381 |
| Eco47I | GGWCC | 3 cut(s) | 251, 626, 1893 |
| Eco53kI | GAGCTC | 1 cut(s) | 2775 |
| Eco57I | CTGAAG | 4 cut(s) | 1356, 1698, 1955, 2481 |
| Eco88I | CYCGRG | 2 cut(s) | 1753, 2850 |
| EcoICRI | GAGCTC | 1 cut(s) | 2775 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1299 |
| EcoO109I | RGGNCCY | 4 cut(s) | 251, 1304, 1931, 2591 |
| EcoRI | GAATTC | 1 cut(s) | 1822 |
| EcoRII | CCWGG | 9 cut(s) | 303, 526, 705, 1036, 1650, 1702, 1895, 2149, 2927 |
| EcoT14I | CCWWGG | 2 cut(s) | 563, 2639 |
| EcoT38I | GRGCYC | 3 cut(s) | 1308, 2594, 2777 |
| EgeI | GGCGCC | 1 cut(s) | 660 |
| EheI | GGCGCC | 1 cut(s) | 660 |
| ErhI | CCWWGG | 2 cut(s) | 563, 2639 |
| Esp3I | CGTCTC | 1 cut(s) | 114 |
| FaeI | CATG | 8 cut(s) | 283, 559, 572, 1520, 1572, 1843, 2159, 2752 |
| FaqI | GGGAC | 4 cut(s) | 173, 290, 612, 2008 |
| FatI | CATG | 8 cut(s) | 279, 555, 568, 1516, 1568, 1839, 2155, 2748 |
| FauNDI | CATATG | 1 cut(s) | 1287 |
| FbaI | TGATCA | 1 cut(s) | 1759 |
| Fnu4HI | GCNGC | 3 cut(s) | 225, 546, 692 |
| FokI | GGATG | 7 cut(s) | 1217, 1618, 2110, 2423, 2499, 2594, 2668 |
| FriOI | GRGCYC | 3 cut(s) | 1308, 2594, 2777 |
| Fsp4HI | GCNGC | 3 cut(s) | 225, 546, 692 |
| GlaI | GCGC | 2 cut(s) | 660, 2882 |
| GluI | GCNGC | 3 cut(s) | 225, 546, 692 |
| GsaI | CCCAGC | 1 cut(s) | 2591 |
| GsuI | CTGGAG | 3 cut(s) | 1512, 1599, 2214 |
| HaeII | RGCGCY | 1 cut(s) | 662 |
| HaeIII | GGCC | 7 cut(s) | 185, 236, 562, 648, 1306, 1933, 2592 |
| HapII | CCGG | 2 cut(s) | 182, 210 |
| HgaI | GACGC | 1 cut(s) | 15 |
| HhaI | GCGC | 2 cut(s) | 661, 2883 |
| Hin1I | GRCGYC | 2 cut(s) | 7, 659 |
| Hin1II | CATG | 8 cut(s) | 283, 559, 572, 1520, 1572, 1843, 2159, 2752 |
| Hin6I | GCGC | 2 cut(s) | 659, 2881 |
| HinP1I | GCGC | 2 cut(s) | 659, 2881 |
| HindIII | AAGCTT | 1 cut(s) | 2267 |
| HpaII | CCGG | 2 cut(s) | 182, 210 |
| HphI | GGTGA | 5 cut(s) | 458, 596, 994, 1052, 2565 |
| Hpy166II | GTNNAC | 4 cut(s) | 866, 2275, 2761, 2924 |
| Hpy8I | GTNNAC | 4 cut(s) | 866, 2275, 2761, 2924 |
| HpyAV | CCTTC | 9 cut(s) | 208, 594, 789, 1135, 1501, 1505, 1922, 1979, 2732 |
| HpyCH4IV | ACGT | 5 cut(s) | 138, 342, 1446, 2030, 2053 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 233, 574, 1360 |
| HpyF3I | CTNAG | 6 cut(s) | 687, 766, 1017, 1233, 1350, 1943 |
| HpySE526I | ACGT | 5 cut(s) | 138, 342, 1446, 2030, 2053 |
| Hsp92I | GRCGYC | 2 cut(s) | 7, 659 |
| Hsp92II | CATG | 8 cut(s) | 283, 559, 572, 1520, 1572, 1843, 2159, 2752 |
| HspAI | GCGC | 2 cut(s) | 659, 2881 |
| KasI | GGCGCC | 1 cut(s) | 658 |
| KpnI | GGTACC | 2 cut(s) | 1503, 2353 |
| KroI | GCCGGC | 1 cut(s) | 181 |
| KroNI | GCCGGC | 1 cut(s) | 183 |
| Ksp22I | TGATCA | 1 cut(s) | 1759 |
| Kzo9I | GATC | 9 cut(s) | 216, 388, 571, 1603, 1759, 1868, 1946, 1963, 2657 |
| LguI | GCTCTTC | 2 cut(s) | 76, 1820 |
| LmnI | GCTCC | 2 cut(s) | 529, 1144 |
| Lsp1109I | GCAGC | 2 cut(s) | 532, 703 |
| LweI | GCATC | 2 cut(s) | 947, 2726 |
| MaeII | ACGT | 5 cut(s) | 138, 342, 1446, 2030, 2053 |
| MalI | GATC | 9 cut(s) | 218, 390, 573, 1605, 1761, 1870, 1948, 1965, 2659 |
| MboI | GATC | 9 cut(s) | 216, 388, 571, 1603, 1759, 1868, 1946, 1963, 2657 |
| MflI | RGATCY | 2 cut(s) | 388, 1946 |
| MhlI | GDGCHC | 4 cut(s) | 868, 1308, 2594, 2777 |
| MlsI | TGGCCA | 1 cut(s) | 648 |
| MluNI | TGGCCA | 1 cut(s) | 648 |
| Mly113I | GGCGCC | 1 cut(s) | 659 |
| MlyI | GAGTC | 5 cut(s) | 291, 1028, 1397, 1600, 2243 |
| MmeI | TCCRAC | 3 cut(s) | 852, 1044, 1306 |
| Mox20I | TGGCCA | 1 cut(s) | 648 |
| MroNI | GCCGGC | 1 cut(s) | 181 |
| MscI | TGGCCA | 1 cut(s) | 648 |
| Msp20I | TGGCCA | 1 cut(s) | 648 |
| MspA1I | CMGCKG | 1 cut(s) | 1016 |
| MspI | CCGG | 2 cut(s) | 182, 210 |
| MspR9I | CCNGG | 9 cut(s) | 305, 528, 707, 1038, 1652, 1704, 1897, 2151, 2929 |
| Mva1269I | GAATGC | 3 cut(s) | 680, 1690, 2021 |
| MvaI | CCWGG | 9 cut(s) | 305, 528, 707, 1038, 1652, 1704, 1897, 2151, 2929 |
| MvnI | CGCG | 1 cut(s) | 2881 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 233, 574, 1360 |
| NaeI | GCCGGC | 1 cut(s) | 183 |
| NarI | GGCGCC | 1 cut(s) | 659 |
| NdeI | CATATG | 1 cut(s) | 1287 |
| NdeII | GATC | 9 cut(s) | 216, 388, 571, 1603, 1759, 1868, 1946, 1963, 2657 |
| NgoMIV | GCCGGC | 1 cut(s) | 181 |
| NheI | GCTAGC | 1 cut(s) | 505 |
| NlaIII | CATG | 8 cut(s) | 283, 559, 572, 1520, 1572, 1843, 2159, 2752 |
| NlaIV | GGNNCC | 9 cut(s) | 252, 628, 660, 1146, 1306, 1501, 2351, 2457, 2592 |
| NmuCI | GTSAC | 6 cut(s) | 1000, 1212, 1260, 1460, 1769, 1855 |
| NspI | RCATGY | 2 cut(s) | 283, 1572 |
| PaeR7I | CTCGAG | 1 cut(s) | 2850 |
| PagI | TCATGA | 1 cut(s) | 1516 |
| PciI | ACATGT | 2 cut(s) | 279, 1568 |
| PciSI | GCTCTTC | 2 cut(s) | 76, 1820 |
| PctI | GAATGC | 3 cut(s) | 680, 1690, 2021 |
| PdiI | GCCGGC | 1 cut(s) | 183 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 623, 908 |
| PkrI | GCNGC | 3 cut(s) | 226, 547, 693 |
| PleI | GAGTC | 5 cut(s) | 291, 1027, 1396, 1599, 2242 |
| PluTI | GGCGCC | 1 cut(s) | 662 |
| PpsI | GAGTC | 5 cut(s) | 291, 1027, 1396, 1599, 2242 |
| PpuMI | RGGWCCY | 1 cut(s) | 251 |
| PscI | ACATGT | 2 cut(s) | 279, 1568 |
| PshBI | ATTAAT | 1 cut(s) | 330 |
| PsiI | TTATAA | 1 cut(s) | 2451 |
| Psp124BI | GAGCTC | 1 cut(s) | 2777 |
| Psp1406I | AACGTT | 1 cut(s) | 2030 |
| Psp5II | RGGWCCY | 1 cut(s) | 251 |
| Psp6I | CCWGG | 9 cut(s) | 303, 526, 705, 1036, 1650, 1702, 1895, 2149, 2927 |
| PspFI | CCCAGC | 1 cut(s) | 2587 |
| PspGI | CCWGG | 9 cut(s) | 303, 526, 705, 1036, 1650, 1702, 1895, 2149, 2927 |
| PspN4I | GGNNCC | 9 cut(s) | 252, 628, 660, 1146, 1306, 1501, 2351, 2457, 2592 |
| PspOMI | GGGCCC | 2 cut(s) | 1304, 2590 |
| PspPI | GGNCC | 9 cut(s) | 234, 251, 626, 1304, 1305, 1893, 1931, 2590, 2591 |
| PspPPI | RGGWCCY | 1 cut(s) | 251 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2086, 2118 |
| PstI | CTGCAG | 1 cut(s) | 1372 |
| PsuI | RGATCY | 2 cut(s) | 388, 1946 |
| PvuII | CAGCTG | 1 cut(s) | 1016 |
| RsaI | GTAC | 8 cut(s) | 214, 398, 1377, 1456, 1501, 1611, 2351, 2888 |
| RsaNI | GTAC | 8 cut(s) | 213, 397, 1376, 1455, 1500, 1610, 2350, 2887 |
| SacI | GAGCTC | 1 cut(s) | 2777 |
| SapI | GCTCTTC | 2 cut(s) | 76, 1820 |
| SatI | GCNGC | 3 cut(s) | 225, 546, 692 |
| Sau3AI | GATC | 9 cut(s) | 216, 388, 571, 1603, 1759, 1868, 1946, 1963, 2657 |
| Sau96I | GGNCC | 9 cut(s) | 234, 251, 626, 1304, 1305, 1893, 1931, 2590, 2591 |
| SchI | GAGTC | 5 cut(s) | 291, 1028, 1397, 1600, 2243 |
| ScrFI | CCNGG | 9 cut(s) | 305, 528, 707, 1038, 1652, 1704, 1897, 2151, 2929 |
| SduI | GDGCHC | 4 cut(s) | 868, 1308, 2594, 2777 |
| SfaNI | GCATC | 2 cut(s) | 947, 2726 |
| SfcI | CTRYAG | 2 cut(s) | 321, 1368 |
| SfoI | GGCGCC | 1 cut(s) | 660 |
| Sfr274I | CTCGAG | 1 cut(s) | 2850 |
| SinI | GGWCC | 3 cut(s) | 251, 626, 1893 |
| SlaI | CTCGAG | 1 cut(s) | 2850 |
| SmlI | CTYRAG | 4 cut(s) | 962, 1526, 1800, 2850 |
| SmoI | CTYRAG | 4 cut(s) | 962, 1526, 1800, 2850 |
| SpeI | ACTAGT | 3 cut(s) | 1085, 1193, 1457 |
| SsiI | CCGC | 4 cut(s) | 224, 351, 368, 1030 |
| SspDI | GGCGCC | 1 cut(s) | 658 |
| SspI | AATATT | 1 cut(s) | 2182 |
| SstI | GAGCTC | 1 cut(s) | 2777 |
| StyD4I | CCNGG | 9 cut(s) | 303, 526, 705, 1036, 1650, 1702, 1895, 2149, 2927 |
| StyI | CCWWGG | 2 cut(s) | 563, 2639 |
| TaiI | ACGT | 5 cut(s) | 141, 345, 1449, 2033, 2056 |
| TaqI | TCGA | 4 cut(s) | 165, 1820, 2358, 2851 |
| TatI | WGTACW | 3 cut(s) | 396, 1375, 2886 |
| TauI | GCSGC | 1 cut(s) | 227 |
| TscAI | CASTG | 3 cut(s) | 370, 691, 1221 |
| TseFI | GTSAC | 6 cut(s) | 1000, 1212, 1260, 1460, 1769, 1855 |
| TseI | GCWGC | 2 cut(s) | 545, 691 |
| Tsp45I | GTSAC | 6 cut(s) | 1000, 1212, 1260, 1460, 1769, 1855 |
| TspGWI | ACGGA | 2 cut(s) | 2324, 2674 |
| TspRI | CASTG | 3 cut(s) | 370, 691, 1221 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 623, 908 |
| VneI | GTGCAC | 1 cut(s) | 864 |
| VpaK11BI | GGWCC | 3 cut(s) | 251, 626, 1893 |
| VspI | ATTAAT | 1 cut(s) | 330 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1299 |
| XapI | RAATTY | 6 cut(s) | 51, 810, 1382, 1736, 1822, 2693 |
| XbaI | TCTAGA | 1 cut(s) | 2237 |
| XceI | RCATGY | 2 cut(s) | 283, 1572 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 620, 1903 |
| XhoI | CTCGAG | 1 cut(s) | 2850 |