NYN domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G09840 AT5G64710 AT5G64710 |
| fragaria_vesca | FvH4_1g23660 |
| malus_domestica | MD01G1017000.v1.1 |
| prunus_persica | Prupe.7G207600_v2.0.a1 |
| pyrus_communis | pycom01g03040 |
| rosa_chinensis | RchiOBHm_Chr2g0119261 |
| rosa_laevigata | RLG00000018460 |
| rosa_multiflora | Rmu_sc0004760.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00124380 |
| rosa_rugosa | Rorug02G0221300 Rorug02G0221300 |
| rosa_samantha | Rh2AG279400 Rh2BG290100 Rh2DG285400 Rh2DG304400 |
| rosa_wichuraiana | Rw2G022220 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1219 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2612 |
| AatII | GACGTC | 1 cut(s) | 2162 |
| Acc36I | ACCTGC | 2 cut(s) | 1219, 2344 |
| Acc65I | GGTACC | 1 cut(s) | 757 |
| AccB1I | GGYRCC | 1 cut(s) | 757 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 722 |
| AccII | CGCG | 1 cut(s) | 2184 |
| AccIII | TCCGGA | 1 cut(s) | 1512 |
| AciI | CCGC | 7 cut(s) | 323, 645, 994, 2083, 2885, 2955, 3076 |
| AclWI | GGATC | 8 cut(s) | 1143, 1504, 1517, 1696, 1981, 2005, 2797, 2917 |
| AcoI | YGGCCR | 3 cut(s) | 659, 745, 2886 |
| AcsI | RAATTY | 4 cut(s) | 876, 1040, 1847, 2980 |
| AcuI | CTGAAG | 3 cut(s) | 134, 1380, 2033 |
| AcvI | CACGTG | 1 cut(s) | 1052 |
| AcyI | GRCGYC | 3 cut(s) | 214, 288, 2159 |
| AdeI | CACNNNGTG | 1 cut(s) | 1055 |
| AfaI | GTAC | 5 cut(s) | 759, 1639, 2423, 2939, 3055 |
| AflIII | ACRYGT | 2 cut(s) | 294, 378 |
| AgeI | ACCGGT | 1 cut(s) | 573 |
| AgsI | TTSAA | 8 cut(s) | 168, 301, 767, 892, 2170, 2245, 2416, 3166 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 1557, 2640 |
| AjnI | CCWGG | 6 cut(s) | 402, 625, 1131, 1306, 2024, 2539 |
| AleI | CACNNNNGTG | 1 cut(s) | 1625 |
| Alw21I | GWGCWC | 1 cut(s) | 1935 |
| Alw26I | GTCTC | 5 cut(s) | 82, 480, 960, 1510, 2843 |
| AlwI | GGATC | 8 cut(s) | 1143, 1504, 1517, 1696, 1981, 2005, 2797, 2917 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 3119 |
| Ama87I | CYCGRG | 1 cut(s) | 1461 |
| Aor13HI | TCCGGA | 1 cut(s) | 1512 |
| ApaI | GGGCCC | 2 cut(s) | 353, 2729 |
| ApoI | RAATTY | 4 cut(s) | 876, 1040, 1847, 2980 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 539, 571 |
| AseI | ATTAAT | 1 cut(s) | 1179 |
| AsiGI | ACCGGT | 1 cut(s) | 573 |
| Asp718I | GGTACC | 1 cut(s) | 757 |
| AspS9I | GGNCC | 9 cut(s) | 333, 349, 350, 725, 2022, 2060, 2725, 2726, 3041 |
| AsuNHI | GCTAGC | 2 cut(s) | 560, 604 |
| AvaI | CYCGRG | 1 cut(s) | 1461 |
| AvaII | GGWCC | 3 cut(s) | 725, 2022, 2060 |
| BaeGI | GKGCMC | 3 cut(s) | 353, 1404, 2729 |
| BalI | TGGCCA | 2 cut(s) | 661, 747 |
| BamHI | GGATCC | 1 cut(s) | 1509 |
| BanI | GGYRCC | 1 cut(s) | 757 |
| BanII | GRGCYC | 2 cut(s) | 353, 2729 |
| BauI | CACGAG | 2 cut(s) | 2277, 2932 |
| BbrPI | CACGTG | 1 cut(s) | 1052 |
| BbsI | GAAGAC | 6 cut(s) | 15, 114, 774, 1242, 1314, 1397 |
| Bbv12I | GWGCWC | 1 cut(s) | 1935 |
| BceAI | ACGGC | 1 cut(s) | 381 |
| BciT130I | CCWGG | 6 cut(s) | 404, 627, 1133, 1308, 2026, 2541 |
| BclI | TGATCA | 3 cut(s) | 1708, 1825, 1885 |
| BcoDI | GTCTC | 5 cut(s) | 82, 480, 960, 1510, 2843 |
| BfaI | CTAG | 7 cut(s) | 6, 561, 605, 1094, 1554, 2201, 3196 |
| BfmI | CTRYAG | 3 cut(s) | 637, 861, 1531 |
| BfuAI | ACCTGC | 2 cut(s) | 1219, 2344 |
| BglII | AGATCT | 2 cut(s) | 487, 2075 |
| BisI | GCNGC | 3 cut(s) | 324, 645, 2886 |
| BlsI | GCNGC | 3 cut(s) | 325, 646, 2887 |
| Bme1390I | CCNGG | 6 cut(s) | 404, 627, 1133, 1308, 2026, 2541 |
| Bme18I | GGWCC | 3 cut(s) | 725, 2022, 2060 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 1557, 2640 |
| BmeT110I | CYCGRG | 1 cut(s) | 1461 |
| BmgT120I | GGNCC | 9 cut(s) | 333, 349, 350, 725, 2022, 2060, 2725, 2726, 3041 |
| BmiI | GGNNCC | 8 cut(s) | 351, 352, 727, 759, 1511, 2727, 3043, 3180 |
| BmrFI | CCNGG | 6 cut(s) | 404, 627, 1133, 1308, 2026, 2541 |
| BmrI | ACTGGG | 1 cut(s) | 432 |
| BmsI | GCATC | 5 cut(s) | 1223, 2526, 2528, 2668, 2777 |
| BmtI | GCTAGC | 2 cut(s) | 564, 608 |
| BmuI | ACTGGG | 1 cut(s) | 432 |
| BpiI | GAAGAC | 6 cut(s) | 15, 114, 774, 1242, 1314, 1397 |
| BpmI | CTGGAG | 4 cut(s) | 777, 1608, 1873, 3054 |
| BpuEI | CTTGAG | 2 cut(s) | 973, 1911 |
| BsaAI | YACGTR | 1 cut(s) | 1052 |
| BsaHI | GRCGYC | 3 cut(s) | 214, 288, 2159 |
| BsaI | GGTCTC | 1 cut(s) | 480 |
| BsaJI | CCNNGG | 8 cut(s) | 662, 1306, 1307, 2025, 2540, 2688, 2711, 3182 |
| BsaWI | WCCGGW | 3 cut(s) | 573, 1512, 1589 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 398, 428 |
| Bse118I | RCCGGY | 2 cut(s) | 284, 573 |
| Bse1I | ACTGG | 4 cut(s) | 427, 700, 1625, 1844 |
| BseAI | TCCGGA | 1 cut(s) | 1512 |
| BseBI | CCWGG | 6 cut(s) | 404, 627, 1133, 1308, 2026, 2541 |
| BseDI | CCNNGG | 8 cut(s) | 662, 1306, 1307, 2025, 2540, 2688, 2711, 3182 |
| BseMII | CTCAG | 4 cut(s) | 801, 1371, 1479, 1593 |
| BseNI | ACTGG | 4 cut(s) | 427, 700, 1625, 1844 |
| BseRI | GAGGAG | 1 cut(s) | 129 |
| BseSI | GKGCMC | 3 cut(s) | 353, 1404, 2729 |
| BseYI | CCCAGC | 1 cut(s) | 2722 |
| BsgI | GTGCAG | 1 cut(s) | 1329 |
| Bsh1236I | CGCG | 1 cut(s) | 2184 |
| BshNI | GGYRCC | 1 cut(s) | 757 |
| BshTI | ACCGGT | 1 cut(s) | 573 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1935 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1461 |
| BsiSI | CCGG | 4 cut(s) | 285, 574, 1513, 1590 |
| BslFI | GGGAC | 4 cut(s) | 272, 711, 1564, 2800 |
| BsmAI | GTCTC | 5 cut(s) | 82, 480, 960, 1510, 2843 |
| BsmFI | GGGAC | 4 cut(s) | 272, 711, 1564, 2800 |
| Bso31I | GGTCTC | 1 cut(s) | 480 |
| BsoBI | CYCGRG | 1 cut(s) | 1461 |
| Bsp120I | GGGCCC | 2 cut(s) | 349, 2725 |
| Bsp1286I | GDGCHC | 4 cut(s) | 353, 1404, 1935, 2729 |
| Bsp13I | TCCGGA | 1 cut(s) | 1512 |
| Bsp19I | CCATGG | 2 cut(s) | 662, 2711 |
| Bsp68I | TCGCGA | 1 cut(s) | 2184 |
| BspACI | CCGC | 7 cut(s) | 323, 645, 994, 2083, 2885, 2955, 3076 |
| BspCNI | CTCAG | 4 cut(s) | 802, 1372, 1480, 1594 |
| BspEI | TCCGGA | 1 cut(s) | 1512 |
| BspFNI | CGCG | 1 cut(s) | 2184 |
| BspHI | TCATGA | 2 cut(s) | 867, 1561 |
| BspLI | GGNNCC | 8 cut(s) | 351, 352, 727, 759, 1511, 2727, 3043, 3180 |
| BspMAI | CTGCAG | 2 cut(s) | 641, 865 |
| BspMI | ACCTGC | 2 cut(s) | 1219, 2344 |
| BspOI | GCTAGC | 2 cut(s) | 564, 608 |
| BspPI | GGATC | 8 cut(s) | 1143, 1504, 1517, 1696, 1981, 2005, 2797, 2917 |
| BspQI | GCTCTTC | 2 cut(s) | 2712, 3185 |
| BspT107I | GGYRCC | 1 cut(s) | 757 |
| BspTNI | GGTCTC | 1 cut(s) | 480 |
| BsrFI | RCCGGY | 2 cut(s) | 284, 573 |
| BsrI | ACTGG | 4 cut(s) | 427, 700, 1625, 1844 |
| BssAI | RCCGGY | 2 cut(s) | 284, 573 |
| BssECI | CCNNGG | 8 cut(s) | 662, 1306, 1307, 2025, 2540, 2688, 2711, 3182 |
| BssNI | GRCGYC | 3 cut(s) | 214, 288, 2159 |
| BssSI | CACGAG | 2 cut(s) | 2277, 2932 |
| BssT1I | CCWWGG | 4 cut(s) | 662, 2688, 2711, 3182 |
| Bst2BI | CACGAG | 2 cut(s) | 2277, 2932 |
| Bst2UI | CCWGG | 6 cut(s) | 404, 627, 1133, 1308, 2026, 2541 |
| Bst6I | CTCTTC | 6 cut(s) | 34, 133, 178, 483, 2712, 3185 |
| BstACI | GRCGYC | 3 cut(s) | 214, 288, 2159 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 673 |
| BstBAI | YACGTR | 1 cut(s) | 1052 |
| BstC8I | GCNNGC | 7 cut(s) | 282, 286, 562, 606, 669, 3076, 3080 |
| BstDEI | CTNAG | 8 cut(s) | 810, 840, 1139, 1380, 1488, 1602, 2072, 3015 |
| BstDSI | CCRYGG | 2 cut(s) | 662, 2711 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2359 |
| BstFNI | CGCG | 1 cut(s) | 2184 |
| BstMAI | GTCTC | 5 cut(s) | 82, 480, 960, 1510, 2843 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 320, 332, 673, 2961 |
| BstNI | CCWGG | 6 cut(s) | 404, 627, 1133, 1308, 2026, 2541 |
| BstNSI | RCATGY | 4 cut(s) | 314, 382, 671, 1939 |
| BstSCI | CCNGG | 6 cut(s) | 402, 625, 1131, 1306, 2024, 2539 |
| BstSFI | CTRYAG | 3 cut(s) | 637, 861, 1531 |
| BstSLI | GKGCMC | 3 cut(s) | 353, 1404, 2729 |
| BstUI | CGCG | 1 cut(s) | 2184 |
| BstV2I | GAAGAC | 6 cut(s) | 15, 114, 774, 1242, 1314, 1397 |
| BstX2I | RGATCY | 6 cut(s) | 487, 1135, 1509, 1973, 2075, 2922 |
| BstYI | RGATCY | 6 cut(s) | 487, 1135, 1509, 1973, 2075, 2922 |
| BtgI | CCRYGG | 2 cut(s) | 662, 2711 |
| BtgZI | GCGATG | 1 cut(s) | 2199 |
| BtsI | GCAGTG | 2 cut(s) | 318, 646 |
| BtuMI | TCGCGA | 1 cut(s) | 2184 |
| BveI | ACCTGC | 2 cut(s) | 1219, 2344 |
| Cac8I | GCNNGC | 7 cut(s) | 282, 286, 562, 606, 669, 3076, 3080 |
| CaiI | CAGNNNCTG | 1 cut(s) | 3119 |
| CciI | TCATGA | 2 cut(s) | 867, 1561 |
| Cfr10I | RCCGGY | 2 cut(s) | 284, 573 |
| Cfr13I | GGNCC | 9 cut(s) | 333, 349, 350, 725, 2022, 2060, 2725, 2726, 3041 |
| CseI | GACGC | 3 cut(s) | 222, 277, 2670 |
| Csp6I | GTAC | 5 cut(s) | 758, 1638, 2422, 2938, 3054 |
| CspAI | ACCGGT | 1 cut(s) | 573 |
| CviQI | GTAC | 5 cut(s) | 758, 1638, 2422, 2938, 3054 |
| DdeI | CTNAG | 8 cut(s) | 810, 840, 1139, 1380, 1488, 1602, 2072, 3015 |
| DraI | TTTAAA | 1 cut(s) | 1014 |
| DraIII | CACNNNGTG | 1 cut(s) | 1055 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2612 |
| DriI | GACNNNNNGTC | 2 cut(s) | 1557, 2640 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2612 |
| EaeI | YGGCCR | 3 cut(s) | 659, 745, 2886 |
| Eam1104I | CTCTTC | 6 cut(s) | 34, 133, 178, 483, 2712, 3185 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 1557, 2640 |
| EarI | CTCTTC | 6 cut(s) | 34, 133, 178, 483, 2712, 3185 |
| EciI | GGCGGA | 1 cut(s) | 2970 |
| Eco130I | CCWWGG | 4 cut(s) | 662, 2688, 2711, 3182 |
| Eco147I | AGGCCT | 1 cut(s) | 410 |
| Eco24I | GRGCYC | 2 cut(s) | 353, 2729 |
| Eco31I | GGTCTC | 1 cut(s) | 480 |
| Eco47I | GGWCC | 3 cut(s) | 725, 2022, 2060 |
| Eco57I | CTGAAG | 3 cut(s) | 134, 1380, 2033 |
| Eco72I | CACGTG | 1 cut(s) | 1052 |
| Eco88I | CYCGRG | 1 cut(s) | 1461 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2359 |
| EcoO109I | RGGNCCY | 4 cut(s) | 349, 350, 2060, 2726 |
| EcoRII | CCWGG | 6 cut(s) | 402, 625, 1131, 1306, 2024, 2539 |
| EcoT14I | CCWWGG | 4 cut(s) | 662, 2688, 2711, 3182 |
| EcoT38I | GRGCYC | 2 cut(s) | 353, 2729 |
| ErhI | CCWWGG | 4 cut(s) | 662, 2688, 2711, 3182 |
| FaqI | GGGAC | 4 cut(s) | 272, 711, 1564, 2800 |
| FauI | CCCGC | 2 cut(s) | 1001, 3083 |
| FauNDI | CATATG | 1 cut(s) | 2496 |
| FbaI | TGATCA | 3 cut(s) | 1708, 1825, 1885 |
| Fnu4HI | GCNGC | 3 cut(s) | 324, 645, 2886 |
| FriOI | GRGCYC | 2 cut(s) | 353, 2729 |
| Fsp4HI | GCNGC | 3 cut(s) | 324, 645, 2886 |
| FspBI | CTAG | 7 cut(s) | 6, 561, 605, 1094, 1554, 2201, 3196 |
| GluI | GCNGC | 3 cut(s) | 324, 645, 2886 |
| GsaI | CCCAGC | 1 cut(s) | 2726 |
| GsuI | CTGGAG | 4 cut(s) | 777, 1608, 1873, 3054 |
| HapII | CCGG | 4 cut(s) | 285, 574, 1513, 1590 |
| HgaI | GACGC | 3 cut(s) | 222, 277, 2670 |
| Hin1I | GRCGYC | 3 cut(s) | 214, 288, 2159 |
| HincII | GTYRAC | 3 cut(s) | 292, 2229, 2685 |
| HindII | GTYRAC | 3 cut(s) | 292, 2229, 2685 |
| HindIII | AAGCTT | 1 cut(s) | 2396 |
| HpaII | CCGG | 4 cut(s) | 285, 574, 1513, 1590 |
| Hpy166II | GTNNAC | 7 cut(s) | 292, 1638, 1837, 2101, 2229, 2685, 2896 |
| Hpy8I | GTNNAC | 7 cut(s) | 292, 1638, 1837, 2101, 2229, 2685, 2896 |
| Hpy99I | CGWCG | 1 cut(s) | 1951 |
| HpyCH4IV | ACGT | 5 cut(s) | 294, 826, 1051, 1722, 2159 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 320, 332, 673, 2961 |
| HpyF3I | CTNAG | 8 cut(s) | 810, 840, 1139, 1380, 1488, 1602, 2072, 3015 |
| HpySE526I | ACGT | 5 cut(s) | 294, 826, 1051, 1722, 2159 |
| Hsp92I | GRCGYC | 3 cut(s) | 214, 288, 2159 |
| Kpn2I | TCCGGA | 1 cut(s) | 1512 |
| KpnI | GGTACC | 1 cut(s) | 761 |
| KroI | GCCGGC | 1 cut(s) | 284 |
| KroNI | GCCGGC | 1 cut(s) | 286 |
| Ksp22I | TGATCA | 3 cut(s) | 1708, 1825, 1885 |
| LguI | GCTCTTC | 2 cut(s) | 2712, 3185 |
| LmnI | GCTCC | 4 cut(s) | 628, 934, 2915, 3178 |
| LweI | GCATC | 5 cut(s) | 1223, 2526, 2528, 2668, 2777 |
| MaeI | CTAG | 7 cut(s) | 6, 561, 605, 1094, 1554, 2201, 3196 |
| MaeII | ACGT | 5 cut(s) | 294, 826, 1051, 1722, 2159 |
| MflI | RGATCY | 6 cut(s) | 487, 1135, 1509, 1973, 2075, 2922 |
| MhlI | GDGCHC | 4 cut(s) | 353, 1404, 1935, 2729 |
| MlsI | TGGCCA | 2 cut(s) | 661, 747 |
| MluNI | TGGCCA | 2 cut(s) | 661, 747 |
| MlyI | GAGTC | 7 cut(s) | 84, 1705, 2564, 2578, 2699, 2924, 3110 |
| MmeI | TCCRAC | 2 cut(s) | 2285, 2382 |
| Mox20I | TGGCCA | 2 cut(s) | 661, 747 |
| MroI | TCCGGA | 1 cut(s) | 1512 |
| MroNI | GCCGGC | 1 cut(s) | 284 |
| MscI | TGGCCA | 2 cut(s) | 661, 747 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1625, 2211 |
| Msp20I | TGGCCA | 2 cut(s) | 661, 747 |
| MspI | CCGG | 4 cut(s) | 285, 574, 1513, 1590 |
| MspR9I | CCNGG | 6 cut(s) | 404, 627, 1133, 1308, 2026, 2541 |
| MvaI | CCWGG | 6 cut(s) | 404, 627, 1133, 1308, 2026, 2541 |
| MvnI | CGCG | 1 cut(s) | 2184 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 320, 332, 673, 2961 |
| NaeI | GCCGGC | 1 cut(s) | 286 |
| NcoI | CCATGG | 2 cut(s) | 662, 2711 |
| NdeI | CATATG | 1 cut(s) | 2496 |
| NgoMIV | GCCGGC | 1 cut(s) | 284 |
| NheI | GCTAGC | 2 cut(s) | 560, 604 |
| NlaIV | GGNNCC | 8 cut(s) | 351, 352, 727, 759, 1511, 2727, 3043, 3180 |
| NmuCI | GTSAC | 8 cut(s) | 545, 801, 894, 1359, 1597, 1895, 1964, 2160 |
| NruI | TCGCGA | 1 cut(s) | 2184 |
| NspI | RCATGY | 4 cut(s) | 314, 382, 671, 1939 |
| OliI | CACNNNNGTG | 1 cut(s) | 1625 |
| PaeI | GCATGC | 1 cut(s) | 671 |
| PaeR7I | CTCGAG | 1 cut(s) | 1461 |
| PagI | TCATGA | 2 cut(s) | 867, 1561 |
| PaqCI | CACCTGC | 1 cut(s) | 1219 |
| PasI | CCCWGGG | 1 cut(s) | 1307 |
| PceI | AGGCCT | 1 cut(s) | 410 |
| PciI | ACATGT | 1 cut(s) | 378 |
| PciSI | GCTCTTC | 2 cut(s) | 2712, 3185 |
| PdiI | GCCGGC | 1 cut(s) | 286 |
| PfeI | GAWTC | 9 cut(s) | 836, 909, 1109, 1223, 1748, 1952, 2015, 2044, 2837 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 722 |
| PinAI | ACCGGT | 1 cut(s) | 573 |
| PkrI | GCNGC | 3 cut(s) | 325, 646, 2887 |
| PleI | GAGTC | 7 cut(s) | 84, 1704, 2563, 2578, 2699, 2924, 3110 |
| PmaCI | CACGTG | 1 cut(s) | 1052 |
| PmlI | CACGTG | 1 cut(s) | 1052 |
| PpsI | GAGTC | 7 cut(s) | 84, 1704, 2563, 2578, 2699, 2924, 3110 |
| Ppu21I | YACGTR | 1 cut(s) | 1052 |
| PpuMI | RGGWCCY | 1 cut(s) | 2060 |
| PscI | ACATGT | 1 cut(s) | 378 |
| PshBI | ATTAAT | 1 cut(s) | 1179 |
| Psp5II | RGGWCCY | 1 cut(s) | 2060 |
| Psp6I | CCWGG | 6 cut(s) | 402, 625, 1131, 1306, 2024, 2539 |
| PspCI | CACGTG | 1 cut(s) | 1052 |
| PspFI | CCCAGC | 1 cut(s) | 2722 |
| PspGI | CCWGG | 6 cut(s) | 402, 625, 1131, 1306, 2024, 2539 |
| PspN4I | GGNNCC | 8 cut(s) | 351, 352, 727, 759, 1511, 2727, 3043, 3180 |
| PspOMI | GGGCCC | 2 cut(s) | 349, 2725 |
| PspPI | GGNCC | 9 cut(s) | 333, 349, 350, 725, 2022, 2060, 2725, 2726, 3041 |
| PspPPI | RGGWCCY | 1 cut(s) | 2060 |
| PspXI | VCTCGAGB | 1 cut(s) | 1461 |
| PstI | CTGCAG | 2 cut(s) | 641, 865 |
| PstNI | CAGNNNCTG | 1 cut(s) | 3119 |
| PsuI | RGATCY | 6 cut(s) | 487, 1135, 1509, 1973, 2075, 2922 |
| RruI | TCGCGA | 1 cut(s) | 2184 |
| RsaI | GTAC | 5 cut(s) | 759, 1639, 2423, 2939, 3055 |
| RsaNI | GTAC | 5 cut(s) | 758, 1638, 2422, 2938, 3054 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1625, 2211 |
| SapI | GCTCTTC | 2 cut(s) | 2712, 3185 |
| SatI | GCNGC | 3 cut(s) | 324, 645, 2886 |
| Sau96I | GGNCC | 9 cut(s) | 333, 349, 350, 725, 2022, 2060, 2725, 2726, 3041 |
| SchI | GAGTC | 7 cut(s) | 84, 1705, 2564, 2578, 2699, 2924, 3110 |
| ScrFI | CCNGG | 6 cut(s) | 404, 627, 1133, 1308, 2026, 2541 |
| SduI | GDGCHC | 4 cut(s) | 353, 1404, 1935, 2729 |
| SfaNI | GCATC | 5 cut(s) | 1223, 2526, 2528, 2668, 2777 |
| SfcI | CTRYAG | 3 cut(s) | 637, 861, 1531 |
| Sfr274I | CTCGAG | 1 cut(s) | 1461 |
| SinI | GGWCC | 3 cut(s) | 725, 2022, 2060 |
| SlaI | CTCGAG | 1 cut(s) | 1461 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1625, 2211 |
| SmlI | CTYRAG | 3 cut(s) | 952, 1461, 1926 |
| SmoI | CTYRAG | 3 cut(s) | 952, 1461, 1926 |
| SphI | GCATGC | 1 cut(s) | 671 |
| SseBI | AGGCCT | 1 cut(s) | 410 |
| SsiI | CCGC | 7 cut(s) | 323, 645, 994, 2083, 2885, 2955, 3076 |
| SspI | AATATT | 1 cut(s) | 2311 |
| SspMI | CTAG | 7 cut(s) | 6, 561, 605, 1094, 1554, 2201, 3196 |
| StuI | AGGCCT | 1 cut(s) | 410 |
| StyD4I | CCNGG | 6 cut(s) | 402, 625, 1131, 1306, 2024, 2539 |
| StyI | CCWWGG | 4 cut(s) | 662, 2688, 2711, 3182 |
| TaiI | ACGT | 5 cut(s) | 297, 829, 1054, 1725, 2162 |
| TaqI | TCGA | 3 cut(s) | 1422, 1462, 1946 |
| TaqII | GACCGA | 1 cut(s) | 1918 |
| TatI | WGTACW | 1 cut(s) | 1637 |
| TauI | GCSGC | 3 cut(s) | 326, 647, 2888 |
| TfiI | GAWTC | 9 cut(s) | 836, 909, 1109, 1223, 1748, 1952, 2015, 2044, 2837 |
| TseFI | GTSAC | 8 cut(s) | 545, 801, 894, 1359, 1597, 1895, 1964, 2160 |
| Tsp45I | GTSAC | 8 cut(s) | 545, 801, 894, 1359, 1597, 1895, 1964, 2160 |
| TspGWI | ACGGA | 2 cut(s) | 1964, 2606 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 722 |
| VpaK11BI | GGWCC | 3 cut(s) | 725, 2022, 2060 |
| VspI | ATTAAT | 1 cut(s) | 1179 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2359 |
| XapI | RAATTY | 4 cut(s) | 876, 1040, 1847, 2980 |
| XbaI | TCTAGA | 1 cut(s) | 2200 |
| XceI | RCATGY | 4 cut(s) | 314, 382, 671, 1939 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 719, 2032 |
| XhoI | CTCGAG | 1 cut(s) | 1461 |
| XspI | CTAG | 7 cut(s) | 6, 561, 605, 1094, 1554, 2201, 3196 |
| ZraI | GACGTC | 1 cut(s) | 2160 |