RLG00000018460

NYN domain

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
30047897 .. 30054010
6114 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000018460

Sequence Viewer

Length: 2976 bp
ATGAGACGCCACCTCATCTCTTCCTCCTATTCTCCTCTCTTCTCTCTTCAAATTTCCCACCTCTTACGCTCTTCTTCATCAGCCAAGCATTTCAGCACTTACTACAATTCTTCAAGACGAGACGAGGAGATTCGGAACGTGAGGGTTTCGGTGTGGTGGGACTTCGAGAATTGCCACTTGCCGGCCACCGTCATGCCCTTCAAGGTCGCCGGTACGATCACGGCGGCCGTCAGGGCCAATGGGATCAAGGGTCCTATTCAAATCAACGCTTTTGGTGACATGTTTCAGCTATCAAGACTCAACCAGGAGGCATTGTCCTCTACAGGGATTAATCTCACTCACGTTCCTAGCGGTGGAAAGAACAGTGCGGATAGGTCTCTCTTGGCAGATCTTTTGTACTGGGTGTCTCAAAATCCCCCACCAGCACATCTGTTTTTAATTTCTGGTGATAGAGACTTTTCTAGCATTTTACACAAGTTAAGAATGAACAACTACAATATATTGCTAGCTAGTCCAGAAAATGCTCCTGGTGTCCTTTGTAGTGCTGCAAGTATCATGTGGCCTTGGCATGATCTGCTTATGGGTGAAAATCTCACAGGAAGGTATTTCAACCAACCACCTGATGGTCCCTATGGTTCTTGGTATGGCCATTACAAGGCGCCTCTTGAAGACCCATTCGCATTCACTGAGCAGCCAGCAGTTTCCCAGGCTGAAAGGCTACCTGAACCTGGTTCTGATTCTAAACTTCAAATGATTCCTACTGGCTCAGAATCTAAGCCTTCTCCAATTCCTAAAGCTGTCGTGAAGCAAATTCGCCATATATTGAAGTCACACCCTAAAGGAATCTCTAGTTCTGAACTTCGTGCACAGTTGGAAAAATATAATGTGAGCTTGGAAAGACCATACTATGGATATAAAAAGTTTTCCTGCTTTCTTGCATCAATGCCTGATATTTTGAGGCTCAAGCCAGTAGGTTATGGAAATTATATGATACATGGTGTCACCCCAAAATCAGCTGAGTCATTCAAGCGGAATCCAGGTGATAGTGATAAGGGACACCAGTTGGATTGTGAGGACACATCTACTAGTGATACTGTGAGTAGAAAGTTATCATTACCTACATCTCCTGAACCAAAGTTGACGGAGCCTTGCCAAGAATTGCAACAGCCCATTTTACTCAATAATACTTTTACTAGTCCTGTGGATGGGAAGTCACTGTCGCCTCCTGCCCCTGAGAAACTTTCTTCCATTGATGAGAAGTCACTATCCCCTCATTCTCCTGACCATATGAAGCCTTTTCTGGGGCCCATTGATGAAAAAGGTGTTGAAGCAGCTGAAGCACAAGAAACTGAGGCTGATTTGCCTCCTGCAGTTGTACAAGAATTTGAGTCTGATGTTGGTTATTTTAAGAGGATTTGGAGAAAGTGGTTTGGCAGTAGAGCTGACGTTTCAGGTACTAGTCACAACAATCAAGAACAAAAACACACTTCTGGAGATGGTACCGAGAAGGAAGGTCATGAAACTCTTGAGAAACATTGTACGAATGTTGATAACTCTGGAAAGGGAACATGTGAGGAAAAGACATCTACGAGTCAGCTTGTTGATACAGTACCTCCAGCCTCATCTTCTTCATCCCATAATCAATCTGCCCTGGACAGTAAAACTGCAACAAGCTCTGAAGTGAATGCTGATAAATCAAATCCAGGGTTTTTTAACCAGATGGTAAATAGGTTTAAATTTTGGAGAAGTAACCCGAGTGATCAATCCTGTGACAGAGCGAAGCTGATGGAATCTCACTCTCAAGAGCACAAGCTCTTCTCGAATTCTTGTTGGGAAGACATCGAATCTTTTATGGTCACGCCTAAAGGATCAGTTATTGTCTCTGAATCAAGGACCAGGGAAGAGATGGCTCTCAATCTTCAAAAGGAAGGGCCTTTGGTTCTTAGATCTCTCGCAAAGAGTGATCTCCTTCGGTTGGTAGATTTGTTAATATCAGAAAAGAAATGGGTGGAAGAATGCCCCTCCCAAACGTTCCCATTCAAACTTGCCCAACATGAGGGAGAGACATCTTTGAATCATTCCCATGATTCAAGTAGGTTGAGTTCCATCTTTTCAGGAAGACCATCCAAAGATGAAATGCAGAGAACACCAGGACATGATGGAGAGGAAAAATGCAAGAATATTCCTCATACTGGAGTTTCACTACCTTTCGTCAAGAATCCTCTTTCAGAGGAGTCTAGAAATGACATACTAGCCGACTGCCAGAAGCTTGTAAACGAGAAGTTAAACGAGTTTCCAAATGGATATAGCATTGGATTATTCAGAAAACAATTCCGTGATAGGTATGGGTACCACCTCGATTTGAAAATGCTTGGTTACGAAAAGTTGGCAAATCTACTAGAAACATTGGATGGAGTAAAAGTAGGGTCTTCTTTCATCTTTCCTCTTTATAAGGTTCCTGAGGTTTTTGATAGGGAGACTGTTCCTGAAATCAAGAAATATACGGTCGGTCATCCCGTGGTTAATTCAGATAAGCAATTTTCTGGTTCAAGAAAGGAAGATGACAGTGGCTCACCGTGGGATGAGCTGGGCCCTCTTACCAACACTACATTTAATAAAAATGTAGTGGAAGTGGCACCAAGGAGGAAAGAAATGGGATCAGCAGGTTTTGATTATGAACCATCCGTTACAGAATTTTCAGATTCAGATGGAGAGGCATCGCCTGGAACTGCATTGGAAGGACAAGGCATGGGCAGAGTGAACAAGGAAGAGAGCTCTCTCTTGCAAATCCTTGATTCGTGGCATAGCAGTAAGGACAACTCAAAGACAGTTGATCGCAGTCAGGCATCTCCTTCATCTGGAGTTGGCACTAATCTGGGATACTATTCGACACCTGCAAAGGGCTACACTTTTGTTGCAGAACTACCTGTTGATGGCAAGGACAAGAAACCAAGTGAACCGAGGATGGAAAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

992

Amino Acids

110.12

Weight (kDa)

6.01

Isoelectric Point (pI)

52.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NYN PF01936 48 - 184 4.9e-25 NYN domain
OST-HTH PF12872 264 - 330 1.3e-09 OST-HTH/LOTUS domain
OHA PF14418 626 - 686 9.5e-08 OST-HTH Associated domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0013218)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G09840 AT5G64710 AT5G64710
fragaria_vesca FvH4_1g23660
malus_domestica MD01G1017000.v1.1
prunus_persica Prupe.7G207600_v2.0.a1
pyrus_communis pycom01g03040
rosa_chinensis RchiOBHm_Chr2g0119261
rosa_laevigata RLG00000018460
rosa_multiflora Rmu_sc0004760.1_g000002
rosa_roxburghii Rroxscaffold_2G00124380
rosa_rugosa Rorug02G0221300 Rorug02G0221300
rosa_samantha Rh2AG279400 Rh2BG290100 Rh2DG285400 Rh2DG304400
rosa_wichuraiana Rw2G022220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2451
AarI CACCTGC 1 cut(s) 2902
Acc36I ACCTGC 2 cut(s) 2654, 2902
Acc65I GGTACC 2 cut(s) 1499, 2349
AccB1I GGYRCC 4 cut(s) 658, 1499, 2349, 2635
AccB7I CCANNNNNTGG 2 cut(s) 623, 908
AciI CCGC 4 cut(s) 224, 351, 368, 1030
AclI AACGTT 1 cut(s) 2030
AclWI GGATC 3 cut(s) 251, 1876, 2665
AcoI YGGCCR 3 cut(s) 183, 225, 646
AcsI RAATTY 6 cut(s) 51, 810, 1382, 1736, 1822, 2693
AcuI CTGAAG 2 cut(s) 1356, 1698
AcyI GRCGYC 2 cut(s) 7, 659
AfaI GTAC 8 cut(s) 214, 398, 1377, 1456, 1501, 1540, 1611, 2351
AflIII ACRYGT 2 cut(s) 279, 1568
AhlI ACTAGT 3 cut(s) 1085, 1193, 1457
Alw21I GWGCWC 3 cut(s) 868, 1809, 2777
Alw26I GTCTC 7 cut(s) 114, 381, 411, 447, 1885, 2057, 2471
Alw44I GTGCAC 1 cut(s) 864
AlwI GGATC 3 cut(s) 251, 1876, 2665
Ama87I CYCGRG 1 cut(s) 1753
AoxI GGCC 8 cut(s) 183, 225, 234, 560, 646, 1304, 1931, 2590
ApaI GGGCCC 2 cut(s) 1308, 2594
ApaLI GTGCAC 1 cut(s) 864
ApeKI GCWGC 3 cut(s) 545, 691, 1331
ApoI RAATTY 6 cut(s) 51, 810, 1382, 1736, 1822, 2693
AseI ATTAAT 1 cut(s) 330
Asp718I GGTACC 2 cut(s) 1499, 2349
AspLEI GCGC 1 cut(s) 661
AspS9I GGNCC 9 cut(s) 234, 251, 626, 1304, 1305, 1893, 1931, 2590, 2591
AsuHPI GGTGA 6 cut(s) 287, 458, 596, 994, 1052, 2565
AsuNHI GCTAGC 1 cut(s) 505
AvaI CYCGRG 1 cut(s) 1753
AvaII GGWCC 3 cut(s) 251, 626, 1893
AxyI CCTNAGG 1 cut(s) 2460
BaeGI GKGCMC 3 cut(s) 868, 1308, 2594
BalI TGGCCA 1 cut(s) 648
BanI GGYRCC 4 cut(s) 658, 1499, 2349, 2635
BanII GRGCYC 3 cut(s) 1308, 2594, 2777
BbsI GAAGAC 4 cut(s) 675, 1842, 2125, 2421
Bbv12I GWGCWC 3 cut(s) 868, 1809, 2777
BbvI GCAGC 3 cut(s) 532, 703, 1343
BceAI ACGGC 2 cut(s) 212, 237
BciVI GTATCC 1 cut(s) 2873
BclI TGATCA 1 cut(s) 1759
BcoDI GTCTC 7 cut(s) 114, 381, 411, 447, 1885, 2057, 2471
BcuI ACTAGT 3 cut(s) 1085, 1193, 1457
BfmI CTRYAG 2 cut(s) 321, 1368
BfoI RGCGCY 1 cut(s) 662
BfuAI ACCTGC 2 cut(s) 2654, 2902
BfuI GTATCC 1 cut(s) 2873
BglI GCCNNNNNGGC 1 cut(s) 233
BglII AGATCT 2 cut(s) 388, 1946
BisI GCNGC 4 cut(s) 225, 546, 692, 1332
BlsI GCNGC 4 cut(s) 226, 547, 693, 1333
Bme18I GGWCC 3 cut(s) 251, 626, 1893
BmeT110I CYCGRG 1 cut(s) 1753
BmgT120I GGNCC 9 cut(s) 234, 251, 626, 1304, 1305, 1893, 1931, 2590, 2591
BmrI ACTGGG 1 cut(s) 409
BmsI GCATC 3 cut(s) 947, 2726, 2855
BmtI GCTAGC 1 cut(s) 509
BmuI ACTGGG 1 cut(s) 409
BpiI GAAGAC 4 cut(s) 675, 1842, 2125, 2421
BpmI CTGGAG 4 cut(s) 1512, 1599, 2214, 2880
BpuEI CTTGAG 3 cut(s) 947, 1547, 1785
BsaHI GRCGYC 2 cut(s) 7, 659
BsaI GGTCTC 1 cut(s) 381
BsaJI CCNNGG 9 cut(s) 563, 705, 1650, 1703, 1896, 2517, 2576, 2639, 2960
BsaXI ACNNNNNCTCC 6 cut(s) 299, 329, 1597, 1627, 2406, 2436
Bse118I RCCGGY 2 cut(s) 181, 209
Bse1I ACTGG 5 cut(s) 404, 766, 968, 1060, 2197
Bse21I CCTNAGG 1 cut(s) 2460
BseDI CCNNGG 9 cut(s) 563, 705, 1650, 1703, 1896, 2517, 2576, 2639, 2960
BseGI GGATG 8 cut(s) 1210, 1631, 2123, 2416, 2512, 2587, 2681, 2970
BseMII CTCAG 6 cut(s) 678, 780, 1008, 1224, 1341, 2451
BseNI ACTGG 5 cut(s) 404, 766, 968, 1060, 2197
BseRI GAGGAG 3 cut(s) 24, 140, 2246
BseSI GKGCMC 3 cut(s) 868, 1308, 2594
BseX3I CGGCCG 1 cut(s) 225
BseXI GCAGC 3 cut(s) 532, 703, 1343
BseYI CCCAGC 1 cut(s) 2587
Bsh1285I CGRYCG 2 cut(s) 228, 2508
BshFI GGCC 8 cut(s) 185, 227, 236, 562, 648, 1306, 1933, 2592
BshNI GGYRCC 4 cut(s) 658, 1499, 2349, 2635
BsiEI CGRYCG 2 cut(s) 228, 2508
BsiHKAI GWGCWC 3 cut(s) 868, 1809, 2777
BsiHKCI CYCGRG 1 cut(s) 1753
BsiSI CCGG 2 cut(s) 182, 210
BslFI GGGAC 3 cut(s) 173, 612, 1068
BsmAI GTCTC 7 cut(s) 114, 381, 411, 447, 1885, 2057, 2471
BsmBI CGTCTC 1 cut(s) 114
BsmFI GGGAC 3 cut(s) 173, 612, 1068
BsmI GAATGC 3 cut(s) 680, 1690, 2021
BsnI GGCC 8 cut(s) 185, 227, 236, 562, 648, 1306, 1933, 2592
Bso31I GGTCTC 1 cut(s) 381
BsoBI CYCGRG 1 cut(s) 1753
Bsp120I GGGCCC 2 cut(s) 1304, 2590
Bsp1286I GDGCHC 5 cut(s) 868, 1308, 1809, 2594, 2777
Bsp1407I TGTACA 1 cut(s) 1375
BspACI CCGC 4 cut(s) 224, 351, 368, 1030
BspANI GGCC 8 cut(s) 185, 227, 236, 562, 648, 1306, 1933, 2592
BspCNI CTCAG 6 cut(s) 679, 779, 1009, 1225, 1342, 2452
BspHI TCATGA 1 cut(s) 1516
BspMAI CTGCAG 1 cut(s) 1372
BspMI ACCTGC 2 cut(s) 2654, 2902
BspOI GCTAGC 1 cut(s) 509
BspPI GGATC 3 cut(s) 251, 1876, 2665
BspQI GCTCTTC 2 cut(s) 76, 1820
BspT107I GGYRCC 4 cut(s) 658, 1499, 2349, 2635
BspTNI GGTCTC 1 cut(s) 381
BsrFI RCCGGY 2 cut(s) 181, 209
BsrGI TGTACA 1 cut(s) 1375
BsrI ACTGG 5 cut(s) 404, 766, 968, 1060, 2197
BssAI RCCGGY 2 cut(s) 181, 209
BssECI CCNNGG 9 cut(s) 563, 705, 1650, 1703, 1896, 2517, 2576, 2639, 2960
BssNI GRCGYC 2 cut(s) 7, 659
BssT1I CCWWGG 2 cut(s) 563, 2639
Bst6I CTCTTC 7 cut(s) 25, 44, 51, 76, 1820, 1896, 2763
BstACI GRCGYC 2 cut(s) 7, 659
BstAPI GCANNNNNTGC 1 cut(s) 574
BstAUI TGTACA 1 cut(s) 1375
BstC8I GCNNGC 3 cut(s) 183, 507, 696
BstDEI CTNAG 8 cut(s) 687, 766, 774, 1017, 1233, 1350, 1943, 2460
BstDSI CCRYGG 2 cut(s) 2517, 2576
BstF5I GGATG 8 cut(s) 1210, 1631, 2123, 2416, 2512, 2587, 2681, 2970
BstH2I RGCGCY 1 cut(s) 662
BstHHI GCGC 1 cut(s) 661
BstMAI GTCTC 7 cut(s) 114, 381, 411, 447, 1885, 2057, 2471
BstMCI CGRYCG 2 cut(s) 228, 2508
BstMWI GCNNNNNNNGC 3 cut(s) 233, 574, 1337
BstNSI RCATGY 2 cut(s) 283, 1572
BstSFI CTRYAG 2 cut(s) 321, 1368
BstSLI GKGCMC 3 cut(s) 868, 1308, 2594
BstV1I GCAGC 3 cut(s) 532, 703, 1343
BstV2I GAAGAC 4 cut(s) 675, 1842, 2125, 2421
BstX2I RGATCY 2 cut(s) 388, 1946
BstYI RGATCY 2 cut(s) 388, 1946
BstZI CGGCCG 1 cut(s) 225
Bsu36I CCTNAGG 1 cut(s) 2460
BsuI GTATCC 1 cut(s) 2873
BsuRI GGCC 8 cut(s) 185, 227, 236, 562, 648, 1306, 1933, 2592
BtgI CCRYGG 2 cut(s) 2517, 2576
BtgZI GCGATG 1 cut(s) 2703
BtsCI GGATG 8 cut(s) 1210, 1631, 2123, 2416, 2512, 2587, 2681, 2970
BtsIMutI CAGTG 4 cut(s) 370, 684, 1214, 2572
BveI ACCTGC 2 cut(s) 2654, 2902
Cac8I GCNNGC 3 cut(s) 183, 507, 696
CciI TCATGA 1 cut(s) 1516
CfoI GCGC 1 cut(s) 661
Cfr10I RCCGGY 2 cut(s) 181, 209
Cfr13I GGNCC 9 cut(s) 234, 251, 626, 1304, 1305, 1893, 1931, 2590, 2591
CseI GACGC 1 cut(s) 15
CsiI ACCWGGT 1 cut(s) 727
Csp6I GTAC 8 cut(s) 213, 397, 1376, 1455, 1500, 1539, 1610, 2350
CviQI GTAC 8 cut(s) 213, 397, 1376, 1455, 1500, 1539, 1610, 2350
DdeI CTNAG 8 cut(s) 687, 766, 774, 1017, 1233, 1350, 1943, 2460
DinI GGCGCC 1 cut(s) 660
DraI TTTAAA 1 cut(s) 1735
EaeI YGGCCR 3 cut(s) 183, 225, 646
EagI CGGCCG 1 cut(s) 225
Eam1104I CTCTTC 7 cut(s) 25, 44, 51, 76, 1820, 1896, 2763
EarI CTCTTC 7 cut(s) 25, 44, 51, 76, 1820, 1896, 2763
Ecl136II GAGCTC 1 cut(s) 2775
EclXI CGGCCG 1 cut(s) 225
Eco130I CCWWGG 2 cut(s) 563, 2639
Eco24I GRGCYC 3 cut(s) 1308, 2594, 2777
Eco31I GGTCTC 1 cut(s) 381
Eco47I GGWCC 3 cut(s) 251, 626, 1893
Eco52I CGGCCG 1 cut(s) 225
Eco53kI GAGCTC 1 cut(s) 2775
Eco57I CTGAAG 2 cut(s) 1356, 1698
Eco81I CCTNAGG 1 cut(s) 2460
Eco88I CYCGRG 1 cut(s) 1753
EcoICRI GAGCTC 1 cut(s) 2775
EcoO109I RGGNCCY 4 cut(s) 251, 1304, 1931, 2591
EcoRI GAATTC 1 cut(s) 1822
EcoT14I CCWWGG 2 cut(s) 563, 2639
EcoT38I GRGCYC 3 cut(s) 1308, 2594, 2777
EgeI GGCGCC 1 cut(s) 660
EheI GGCGCC 1 cut(s) 660
ErhI CCWWGG 2 cut(s) 563, 2639
Esp3I CGTCTC 1 cut(s) 114
FaqI GGGAC 3 cut(s) 173, 612, 1068
FauNDI CATATG 1 cut(s) 1287
FbaI TGATCA 1 cut(s) 1759
Fnu4HI GCNGC 4 cut(s) 225, 546, 692, 1332
FokI GGATG 7 cut(s) 1217, 1618, 2110, 2423, 2499, 2594, 2668
FriOI GRGCYC 3 cut(s) 1308, 2594, 2777
Fsp4HI GCNGC 4 cut(s) 225, 546, 692, 1332
GlaI GCGC 1 cut(s) 660
GluI GCNGC 4 cut(s) 225, 546, 692, 1332
GsaI CCCAGC 1 cut(s) 2591
GsuI CTGGAG 4 cut(s) 1512, 1599, 2214, 2880
HaeII RGCGCY 1 cut(s) 662
HaeIII GGCC 8 cut(s) 185, 227, 236, 562, 648, 1306, 1933, 2592
HapII CCGG 2 cut(s) 182, 210
HgaI GACGC 1 cut(s) 15
HhaI GCGC 1 cut(s) 661
Hin1I GRCGYC 2 cut(s) 7, 659
Hin6I GCGC 1 cut(s) 659
HinP1I GCGC 1 cut(s) 659
HincII GTYRAC 1 cut(s) 1140
HindII GTYRAC 1 cut(s) 1140
HindIII AAGCTT 1 cut(s) 2267
HpaII CCGG 2 cut(s) 182, 210
HphI GGTGA 6 cut(s) 287, 458, 596, 994, 1052, 2565
Hpy166II GTNNAC 5 cut(s) 866, 1140, 2275, 2761, 2957
Hpy8I GTNNAC 5 cut(s) 866, 1140, 2275, 2761, 2957
HpyAV CCTTC 9 cut(s) 208, 594, 789, 1501, 1505, 1922, 1979, 2732, 2862
HpyCH4IV ACGT 4 cut(s) 138, 342, 1446, 2030
HpyF10VI GCNNNNNNNGC 3 cut(s) 233, 574, 1337
HpyF3I CTNAG 8 cut(s) 687, 766, 774, 1017, 1233, 1350, 1943, 2460
HpySE526I ACGT 4 cut(s) 138, 342, 1446, 2030
Hsp92I GRCGYC 2 cut(s) 7, 659
HspAI GCGC 1 cut(s) 659
KasI GGCGCC 1 cut(s) 658
KpnI GGTACC 2 cut(s) 1503, 2353
KroI GCCGGC 1 cut(s) 181
KroNI GCCGGC 1 cut(s) 183
Ksp22I TGATCA 1 cut(s) 1759
LguI GCTCTTC 2 cut(s) 76, 1820
LmnI GCTCC 2 cut(s) 529, 1144
Lsp1109I GCAGC 3 cut(s) 532, 703, 1343
LweI GCATC 3 cut(s) 947, 2726, 2855
MabI ACCWGGT 1 cut(s) 727
MaeII ACGT 4 cut(s) 138, 342, 1446, 2030
MflI RGATCY 2 cut(s) 388, 1946
MhlI GDGCHC 5 cut(s) 868, 1308, 1809, 2594, 2777
MlsI TGGCCA 1 cut(s) 648
MluNI TGGCCA 1 cut(s) 648
Mly113I GGCGCC 1 cut(s) 659
MlyI GAGTC 5 cut(s) 291, 1028, 1397, 1600, 2243
MmeI TCCRAC 2 cut(s) 852, 1044
Mox20I TGGCCA 1 cut(s) 648
MroNI GCCGGC 1 cut(s) 181
MscI TGGCCA 1 cut(s) 648
MslI CAYNNNNRTG 2 cut(s) 191, 2082
Msp20I TGGCCA 1 cut(s) 648
MspA1I CMGCKG 2 cut(s) 1016, 1334
MspI CCGG 2 cut(s) 182, 210
Mva1269I GAATGC 3 cut(s) 680, 1690, 2021
MwoI GCNNNNNNNGC 3 cut(s) 233, 574, 1337
NaeI GCCGGC 1 cut(s) 183
NarI GGCGCC 1 cut(s) 659
NdeI CATATG 1 cut(s) 1287
NgoMIV GCCGGC 1 cut(s) 181
NheI GCTAGC 1 cut(s) 505
NmuCI GTSAC 8 cut(s) 275, 828, 1000, 1212, 1260, 1460, 1769, 1855
NspI RCATGY 2 cut(s) 283, 1572
PagI TCATGA 1 cut(s) 1516
PaqCI CACCTGC 1 cut(s) 2902
PciI ACATGT 2 cut(s) 279, 1568
PciSI GCTCTTC 2 cut(s) 76, 1820
PcsI WCGNNNNNNNCGW 1 cut(s) 2514
PctI GAATGC 3 cut(s) 680, 1690, 2021
PdiI GCCGGC 1 cut(s) 183
PflMI CCANNNNNTGG 2 cut(s) 623, 908
PkrI GCNGC 4 cut(s) 226, 547, 693, 1333
PleI GAGTC 5 cut(s) 291, 1027, 1396, 1599, 2242
PluTI GGCGCC 1 cut(s) 662
PpsI GAGTC 5 cut(s) 291, 1027, 1396, 1599, 2242
PpuMI RGGWCCY 1 cut(s) 251
PscI ACATGT 2 cut(s) 279, 1568
PshBI ATTAAT 1 cut(s) 330
PsiI TTATAA 1 cut(s) 2451
Psp124BI GAGCTC 1 cut(s) 2777
Psp1406I AACGTT 1 cut(s) 2030
Psp5II RGGWCCY 1 cut(s) 251
PspFI CCCAGC 1 cut(s) 2587
PspOMI GGGCCC 2 cut(s) 1304, 2590
PspPI GGNCC 9 cut(s) 234, 251, 626, 1304, 1305, 1893, 1931, 2590, 2591
PspPPI RGGWCCY 1 cut(s) 251
PsrI GAACNNNNNNTAC 2 cut(s) 2086, 2118
PstI CTGCAG 1 cut(s) 1372
PsuI RGATCY 2 cut(s) 388, 1946
PvuII CAGCTG 2 cut(s) 1016, 1334
RsaI GTAC 8 cut(s) 214, 398, 1377, 1456, 1501, 1540, 1611, 2351
RsaNI GTAC 8 cut(s) 213, 397, 1376, 1455, 1500, 1539, 1610, 2350
RseI CAYNNNNRTG 2 cut(s) 191, 2082
SacI GAGCTC 1 cut(s) 2777
SapI GCTCTTC 2 cut(s) 76, 1820
SatI GCNGC 4 cut(s) 225, 546, 692, 1332
Sau96I GGNCC 9 cut(s) 234, 251, 626, 1304, 1305, 1893, 1931, 2590, 2591
SchI GAGTC 5 cut(s) 291, 1028, 1397, 1600, 2243
SduI GDGCHC 5 cut(s) 868, 1308, 1809, 2594, 2777
SexAI ACCWGGT 1 cut(s) 727
SfaNI GCATC 3 cut(s) 947, 2726, 2855
SfcI CTRYAG 2 cut(s) 321, 1368
SfiI GGCCNNNNNGGCC 1 cut(s) 233
SfoI GGCGCC 1 cut(s) 660
SinI GGWCC 3 cut(s) 251, 626, 1893
SmiMI CAYNNNNRTG 2 cut(s) 191, 2082
SmlI CTYRAG 3 cut(s) 962, 1526, 1800
SmoI CTYRAG 3 cut(s) 962, 1526, 1800
SpeI ACTAGT 3 cut(s) 1085, 1193, 1457
SsiI CCGC 4 cut(s) 224, 351, 368, 1030
SspDI GGCGCC 1 cut(s) 658
SspI AATATT 1 cut(s) 2182
SstI GAGCTC 1 cut(s) 2777
StyI CCWWGG 2 cut(s) 563, 2639
TaiI ACGT 4 cut(s) 141, 345, 1449, 2033
TaqI TCGA 5 cut(s) 165, 1820, 1842, 2358, 2888
TaqII GACCGA 1 cut(s) 2498
TatI WGTACW 2 cut(s) 396, 1375
TauI GCSGC 1 cut(s) 227
TscAI CASTG 4 cut(s) 370, 691, 1221, 2572
TseFI GTSAC 8 cut(s) 275, 828, 1000, 1212, 1260, 1460, 1769, 1855
TseI GCWGC 3 cut(s) 545, 691, 1331
Tsp45I GTSAC 8 cut(s) 275, 828, 1000, 1212, 1260, 1460, 1769, 1855
TspGWI ACGGA 3 cut(s) 1157, 2324, 2674
TspRI CASTG 4 cut(s) 370, 691, 1221, 2572
Van91I CCANNNNNTGG 2 cut(s) 623, 908
VneI GTGCAC 1 cut(s) 864
VpaK11BI GGWCC 3 cut(s) 251, 626, 1893
VspI ATTAAT 1 cut(s) 330
XapI RAATTY 6 cut(s) 51, 810, 1382, 1736, 1822, 2693
XbaI TCTAGA 1 cut(s) 2237
XceI RCATGY 2 cut(s) 283, 1572
XcmI CCANNNNNNNNNTGG 2 cut(s) 620, 1903
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.