NYN domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G09840 AT5G64710 AT5G64710 |
| fragaria_vesca | FvH4_1g23660 |
| malus_domestica | MD01G1017000.v1.1 |
| prunus_persica | Prupe.7G207600_v2.0.a1 |
| pyrus_communis | pycom01g03040 |
| rosa_chinensis | RchiOBHm_Chr2g0119261 |
| rosa_laevigata | RLG00000018460 |
| rosa_multiflora | Rmu_sc0004760.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00124380 |
| rosa_rugosa | Rorug02G0221300 Rorug02G0221300 |
| rosa_samantha | Rh2AG279400 Rh2BG290100 Rh2DG285400 Rh2DG304400 |
| rosa_wichuraiana | Rw2G022220 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 1117, 2744 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 347 |
| AccIII | TCCGGA | 1 cut(s) | 1180 |
| AciI | CCGC | 4 cut(s) | 619, 863, 2126, 2598 |
| AclWI | GGATC | 9 cut(s) | 774, 1702, 1908, 1923, 1950, 2448, 2461, 2509, 2629 |
| AcoI | YGGCCR | 2 cut(s) | 284, 370 |
| AcsI | RAATTY | 8 cut(s) | 10, 244, 501, 534, 674, 1056, 1295, 1544 |
| AdeI | CACNNNGTG | 1 cut(s) | 1958 |
| AfaI | GTAC | 6 cut(s) | 684, 719, 730, 820, 2359, 2651 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 321, 347, 379, 403, 1750, 2018, 2238, 2754 |
| AgeI | ACCGGT | 1 cut(s) | 198 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1275 |
| AjnI | CCWGG | 6 cut(s) | 250, 451, 1510, 1721, 2236, 2777 |
| Alw21I | GWGCWC | 1 cut(s) | 2121 |
| Alw26I | GTCTC | 7 cut(s) | 105, 585, 753, 1770, 2262, 2555, 2728 |
| AlwI | GGATC | 9 cut(s) | 774, 1702, 1908, 1923, 1950, 2448, 2461, 2509, 2629 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1703 |
| Aor13HI | TCCGGA | 1 cut(s) | 1180 |
| AoxI | GGCC | 3 cut(s) | 284, 370, 2437 |
| ApaI | GGGCCC | 1 cut(s) | 2441 |
| ApeKI | GCWGC | 5 cut(s) | 269, 415, 1403, 2629, 2673 |
| ApoI | RAATTY | 8 cut(s) | 10, 244, 501, 534, 674, 1056, 1295, 1544 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 164, 196 |
| AseI | ATTAAT | 1 cut(s) | 810 |
| AsiGI | ACCGGT | 1 cut(s) | 198 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1891 |
| AspS9I | GGNCC | 6 cut(s) | 350, 1719, 1757, 2327, 2437, 2438 |
| AsuC2I | CCSGG | 1 cut(s) | 764 |
| AsuHPI | GGTGA | 8 cut(s) | 182, 320, 677, 1322, 1357, 1851, 2254, 2412 |
| AsuNHI | GCTAGC | 2 cut(s) | 185, 229 |
| AvaII | GGWCC | 4 cut(s) | 350, 1719, 1757, 2327 |
| BaeGI | GKGCMC | 1 cut(s) | 2441 |
| BalI | TGGCCA | 2 cut(s) | 286, 372 |
| BamHI | GGATCC | 1 cut(s) | 2453 |
| BanI | GGYRCC | 2 cut(s) | 1117, 2744 |
| BanII | GRGCYC | 1 cut(s) | 2441 |
| BauI | CACGAG | 3 cut(s) | 1974, 2749, 2821 |
| BbsI | GAAGAC | 4 cut(s) | 399, 1115, 1335, 2051 |
| Bbv12I | GWGCWC | 1 cut(s) | 2121 |
| BbvI | GCAGC | 5 cut(s) | 256, 427, 1390, 2616, 2685 |
| BceAI | ACGGC | 1 cut(s) | 403 |
| BciT130I | CCWGG | 6 cut(s) | 252, 453, 1512, 1723, 2238, 2779 |
| BciVI | GTATCC | 1 cut(s) | 2345 |
| BclI | TGATCA | 1 cut(s) | 1582 |
| BcnI | CCSGG | 1 cut(s) | 764 |
| BcoDI | GTCTC | 7 cut(s) | 105, 585, 753, 1770, 2262, 2555, 2728 |
| BfaI | CTAG | 5 cut(s) | 186, 230, 2078, 2861, 2902 |
| BfmI | CTRYAG | 1 cut(s) | 2630 |
| BfuI | GTATCC | 1 cut(s) | 2345 |
| BglII | AGATCT | 3 cut(s) | 112, 803, 1772 |
| BisI | GCNGC | 6 cut(s) | 270, 416, 1404, 2598, 2630, 2674 |
| BlsI | GCNGC | 6 cut(s) | 271, 417, 1405, 2599, 2631, 2675 |
| Bme1390I | CCNGG | 7 cut(s) | 252, 453, 764, 1512, 1723, 2238, 2779 |
| Bme18I | GGWCC | 4 cut(s) | 350, 1719, 1757, 2327 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1275 |
| BmgT120I | GGNCC | 6 cut(s) | 350, 1719, 1757, 2327, 2437, 2438 |
| BmiI | GGNNCC | 6 cut(s) | 352, 384, 1119, 2439, 2455, 2746 |
| BmrFI | CCNGG | 7 cut(s) | 252, 453, 764, 1512, 1723, 2238, 2779 |
| BmrI | ACTGGG | 1 cut(s) | 330 |
| BmsI | GCATC | 2 cut(s) | 1415, 2380 |
| BmtI | GCTAGC | 2 cut(s) | 189, 233 |
| BmuI | ACTGGG | 1 cut(s) | 330 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1762 |
| BpiI | GAAGAC | 4 cut(s) | 399, 1115, 1335, 2051 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1452 |
| BpuEI | CTTGAG | 3 cut(s) | 638, 1608, 2204 |
| BpuMI | CCSGG | 1 cut(s) | 764 |
| BsaBI | GATNNNNATC | 2 cut(s) | 38, 844 |
| BsaI | GGTCTC | 2 cut(s) | 105, 753 |
| BsaJI | CCNNGG | 6 cut(s) | 287, 1511, 1722, 2237, 2423, 2888 |
| BsaWI | WCCGGW | 2 cut(s) | 198, 1180 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 321, 347, 379, 403, 1750, 2018, 2238, 2754 |
| Bse118I | RCCGGY | 1 cut(s) | 198 |
| Bse1I | ACTGG | 4 cut(s) | 325, 1481, 1488, 2352 |
| Bse8I | GATNNNNATC | 2 cut(s) | 38, 844 |
| BseAI | TCCGGA | 1 cut(s) | 1180 |
| BseBI | CCWGG | 6 cut(s) | 252, 453, 1512, 1723, 2238, 2779 |
| BseDI | CCNNGG | 6 cut(s) | 287, 1511, 1722, 2237, 2423, 2888 |
| BseGI | GGATG | 9 cut(s) | 39, 136, 845, 1433, 2262, 2410, 2525, 2668, 2898 |
| BseJI | GATNNNNATC | 2 cut(s) | 38, 844 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 321, 347, 379, 403, 1750, 2018, 2238, 2754 |
| BseMII | CTCAG | 8 cut(s) | 438, 939, 987, 1035, 1197, 1568, 2312, 2807 |
| BseNI | ACTGG | 4 cut(s) | 325, 1481, 1488, 2352 |
| BseSI | GKGCMC | 1 cut(s) | 2441 |
| BseXI | GCAGC | 5 cut(s) | 256, 427, 1390, 2616, 2685 |
| BseYI | CCCAGC | 2 cut(s) | 2122, 2434 |
| BshFI | GGCC | 3 cut(s) | 286, 372, 2439 |
| BshNI | GGYRCC | 2 cut(s) | 1117, 2744 |
| BshTI | ACCGGT | 1 cut(s) | 198 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2121 |
| BsiSI | CCGG | 3 cut(s) | 199, 763, 1181 |
| BslFI | GGGAC | 3 cut(s) | 336, 1282, 2770 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 321, 347, 379, 403, 1750, 2018, 2238, 2754 |
| BsmAI | GTCTC | 7 cut(s) | 105, 585, 753, 1770, 2262, 2555, 2728 |
| BsmBI | CGTCTC | 1 cut(s) | 2262 |
| BsmFI | GGGAC | 3 cut(s) | 336, 1282, 2770 |
| BsmI | GAATGC | 1 cut(s) | 1847 |
| BsnI | GGCC | 3 cut(s) | 286, 372, 2439 |
| Bso31I | GGTCTC | 2 cut(s) | 105, 753 |
| Bsp120I | GGGCCC | 1 cut(s) | 2437 |
| Bsp1286I | GDGCHC | 2 cut(s) | 2121, 2441 |
| Bsp13I | TCCGGA | 1 cut(s) | 1180 |
| Bsp19I | CCATGG | 2 cut(s) | 287, 2423 |
| BspACI | CCGC | 4 cut(s) | 619, 863, 2126, 2598 |
| BspANI | GGCC | 3 cut(s) | 286, 372, 2439 |
| BspCNI | CTCAG | 8 cut(s) | 439, 940, 988, 1034, 1198, 1569, 2311, 2806 |
| BspEI | TCCGGA | 1 cut(s) | 1180 |
| BspLI | GGNNCC | 6 cut(s) | 352, 384, 1119, 2439, 2455, 2746 |
| BspMAI | CTGCAG | 1 cut(s) | 2634 |
| BspOI | GCTAGC | 2 cut(s) | 189, 233 |
| BspPI | GGATC | 9 cut(s) | 774, 1702, 1908, 1923, 1950, 2448, 2461, 2509, 2629 |
| BspQI | GCTCTTC | 2 cut(s) | 2424, 2792 |
| BspT107I | GGYRCC | 2 cut(s) | 1117, 2744 |
| BspTNI | GGTCTC | 2 cut(s) | 105, 753 |
| BsrFI | RCCGGY | 1 cut(s) | 198 |
| BsrI | ACTGG | 4 cut(s) | 325, 1481, 1488, 2352 |
| BssAI | RCCGGY | 1 cut(s) | 198 |
| BssECI | CCNNGG | 6 cut(s) | 287, 1511, 1722, 2237, 2423, 2888 |
| BssSI | CACGAG | 3 cut(s) | 1974, 2749, 2821 |
| BssT1I | CCWWGG | 3 cut(s) | 287, 2423, 2888 |
| Bst2BI | CACGAG | 3 cut(s) | 1974, 2749, 2821 |
| Bst2UI | CCWGG | 6 cut(s) | 252, 453, 1512, 1723, 2238, 2779 |
| Bst4CI | ACNGT | 6 cut(s) | 89, 786, 933, 981, 2087, 2707 |
| Bst6I | CTCTTC | 5 cut(s) | 108, 1125, 2424, 2553, 2792 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 298, 2774 |
| BstC8I | GCNNGC | 6 cut(s) | 187, 231, 294, 564, 1401, 2678 |
| BstDSI | CCRYGG | 2 cut(s) | 287, 2423 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1748 |
| BstF5I | GGATG | 9 cut(s) | 39, 136, 845, 1433, 2262, 2410, 2525, 2668, 2898 |
| BstMAI | GTCTC | 7 cut(s) | 105, 585, 753, 1770, 2262, 2555, 2728 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 298, 2673, 2774 |
| BstNI | CCWGG | 6 cut(s) | 252, 453, 1512, 1723, 2238, 2779 |
| BstNSI | RCATGY | 3 cut(s) | 296, 1403, 1966 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1762 |
| BstSCI | CCNGG | 7 cut(s) | 250, 451, 762, 1510, 1721, 2236, 2777 |
| BstSFI | CTRYAG | 1 cut(s) | 2630 |
| BstSLI | GKGCMC | 1 cut(s) | 2441 |
| BstV1I | GCAGC | 5 cut(s) | 256, 427, 1390, 2616, 2685 |
| BstV2I | GAAGAC | 4 cut(s) | 399, 1115, 1335, 2051 |
| BstX2I | RGATCY | 7 cut(s) | 112, 766, 803, 1772, 1928, 2453, 2634 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1939 |
| BstYI | RGATCY | 7 cut(s) | 112, 766, 803, 1772, 1928, 2453, 2634 |
| BsuI | GTATCC | 1 cut(s) | 2345 |
| BsuRI | GGCC | 3 cut(s) | 286, 372, 2439 |
| BtgI | CCRYGG | 2 cut(s) | 287, 2423 |
| BtgZI | GCGATG | 1 cut(s) | 2550 |
| BtsCI | GGATG | 9 cut(s) | 39, 136, 845, 1433, 2262, 2410, 2525, 2668, 2898 |
| BtsI | GCAGTG | 1 cut(s) | 271 |
| BtsIMutI | CAGTG | 3 cut(s) | 94, 271, 1488 |
| Cac8I | GCNNGC | 6 cut(s) | 187, 231, 294, 564, 1401, 2678 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1703 |
| Cfr10I | RCCGGY | 1 cut(s) | 198 |
| Cfr13I | GGNCC | 6 cut(s) | 350, 1719, 1757, 2327, 2437, 2438 |
| CseI | GACGC | 1 cut(s) | 2382 |
| Csp6I | GTAC | 6 cut(s) | 683, 718, 729, 819, 2358, 2650 |
| CspAI | ACCGGT | 1 cut(s) | 198 |
| CviQI | GTAC | 6 cut(s) | 683, 718, 729, 819, 2358, 2650 |
| DraI | TTTAAA | 1 cut(s) | 648 |
| DraIII | CACNNNGTG | 1 cut(s) | 1958 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1275 |
| EaeI | YGGCCR | 2 cut(s) | 284, 370 |
| Eam1104I | CTCTTC | 5 cut(s) | 108, 1125, 2424, 2553, 2792 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1275 |
| EarI | CTCTTC | 5 cut(s) | 108, 1125, 2424, 2553, 2792 |
| Eco130I | CCWWGG | 3 cut(s) | 287, 2423, 2888 |
| Eco24I | GRGCYC | 1 cut(s) | 2441 |
| Eco31I | GGTCTC | 2 cut(s) | 105, 753 |
| Eco32I | GATATC | 1 cut(s) | 47 |
| Eco47I | GGWCC | 4 cut(s) | 350, 1719, 1757, 2327 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1748 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1757, 2438 |
| EcoRII | CCWGG | 6 cut(s) | 250, 451, 1510, 1721, 2236, 2777 |
| EcoRV | GATATC | 1 cut(s) | 47 |
| EcoT14I | CCWWGG | 3 cut(s) | 287, 2423, 2888 |
| EcoT38I | GRGCYC | 1 cut(s) | 2441 |
| ErhI | CCWWGG | 3 cut(s) | 287, 2423, 2888 |
| Esp3I | CGTCTC | 1 cut(s) | 2262 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1776, 1808 |
| FaqI | GGGAC | 3 cut(s) | 336, 1282, 2770 |
| FauI | CCCGC | 2 cut(s) | 626, 2119 |
| FauNDI | CATATG | 1 cut(s) | 2193 |
| FbaI | TGATCA | 1 cut(s) | 1582 |
| Fnu4HI | GCNGC | 6 cut(s) | 270, 416, 1404, 2598, 2630, 2674 |
| FokI | GGATG | 8 cut(s) | 26, 123, 832, 1420, 2249, 2417, 2512, 2675 |
| FriOI | GRGCYC | 1 cut(s) | 2441 |
| Fsp4HI | GCNGC | 6 cut(s) | 270, 416, 1404, 2598, 2630, 2674 |
| FspBI | CTAG | 5 cut(s) | 186, 230, 2078, 2861, 2902 |
| GluI | GCNGC | 6 cut(s) | 270, 416, 1404, 2598, 2630, 2674 |
| GsaI | CCCAGC | 2 cut(s) | 2126, 2438 |
| HaeIII | GGCC | 3 cut(s) | 286, 372, 2439 |
| HapII | CCGG | 3 cut(s) | 199, 763, 1181 |
| HgaI | GACGC | 1 cut(s) | 2382 |
| HincII | GTYRAC | 1 cut(s) | 1807 |
| HindII | GTYRAC | 1 cut(s) | 1807 |
| HindIII | AAGCTT | 1 cut(s) | 2093 |
| HpaII | CCGG | 3 cut(s) | 199, 763, 1181 |
| HphI | GGTGA | 8 cut(s) | 182, 320, 677, 1322, 1357, 1851, 2254, 2412 |
| Hpy166II | GTNNAC | 3 cut(s) | 1630, 1807, 2608 |
| Hpy8I | GTNNAC | 3 cut(s) | 1630, 1807, 2608 |
| HpyCH4III | ACNGT | 6 cut(s) | 89, 786, 933, 981, 2087, 2707 |
| HpyCH4IV | ACGT | 3 cut(s) | 53, 1957, 2593 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 298, 2673, 2774 |
| HpySE526I | ACGT | 3 cut(s) | 53, 1957, 2593 |
| Kpn2I | TCCGGA | 1 cut(s) | 1180 |
| Ksp22I | TGATCA | 1 cut(s) | 1582 |
| LguI | GCTCTTC | 2 cut(s) | 2424, 2792 |
| LmnI | GCTCC | 2 cut(s) | 559, 2627 |
| Lsp1109I | GCAGC | 5 cut(s) | 256, 427, 1390, 2616, 2685 |
| LweI | GCATC | 2 cut(s) | 1415, 2380 |
| MaeI | CTAG | 5 cut(s) | 186, 230, 2078, 2861, 2902 |
| MaeII | ACGT | 3 cut(s) | 53, 1957, 2593 |
| MaeIII | GTNAC | 9 cut(s) | 170, 426, 519, 927, 1277, 1592, 1857, 1958, 2812 |
| MflI | RGATCY | 7 cut(s) | 112, 766, 803, 1772, 1928, 2453, 2634 |
| MhlI | GDGCHC | 2 cut(s) | 2121, 2441 |
| MlsI | TGGCCA | 2 cut(s) | 286, 372 |
| MluNI | TGGCCA | 2 cut(s) | 286, 372 |
| MlyI | GAGTC | 7 cut(s) | 1285, 1331, 2261, 2411, 2489, 2636, 2813 |
| MmeI | TCCRAC | 1 cut(s) | 2481 |
| Mox20I | TGGCCA | 2 cut(s) | 286, 372 |
| MroI | TCCGGA | 1 cut(s) | 1180 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1891 |
| MscI | TGGCCA | 2 cut(s) | 286, 372 |
| MslI | CAYNNNNRTG | 1 cut(s) | 528 |
| Msp20I | TGGCCA | 2 cut(s) | 286, 372 |
| MspA1I | CMGCKG | 1 cut(s) | 2126 |
| MspI | CCGG | 3 cut(s) | 199, 763, 1181 |
| MspR9I | CCNGG | 7 cut(s) | 252, 453, 764, 1512, 1723, 2238, 2779 |
| Mva1269I | GAATGC | 1 cut(s) | 1847 |
| MvaI | CCWGG | 6 cut(s) | 252, 453, 1512, 1723, 2238, 2779 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 298, 2673, 2774 |
| NciI | CCSGG | 1 cut(s) | 764 |
| NcoI | CCATGG | 2 cut(s) | 287, 2423 |
| NdeI | CATATG | 1 cut(s) | 2193 |
| NheI | GCTAGC | 2 cut(s) | 185, 229 |
| NlaIV | GGNNCC | 6 cut(s) | 352, 384, 1119, 2439, 2455, 2746 |
| NmuCI | GTSAC | 8 cut(s) | 170, 426, 519, 927, 1277, 1592, 1857, 1958 |
| NspI | RCATGY | 3 cut(s) | 296, 1403, 1966 |
| PaeI | GCATGC | 2 cut(s) | 296, 1403 |
| PciSI | GCTCTTC | 2 cut(s) | 2424, 2792 |
| PctI | GAATGC | 1 cut(s) | 1847 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1891 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 347 |
| PinAI | ACCGGT | 1 cut(s) | 198 |
| PkrI | GCNGC | 6 cut(s) | 271, 417, 1405, 2599, 2631, 2675 |
| PleI | GAGTC | 7 cut(s) | 1284, 1331, 2260, 2411, 2488, 2636, 2813 |
| PpsI | GAGTC | 7 cut(s) | 1284, 1331, 2260, 2411, 2488, 2636, 2813 |
| PpuMI | RGGWCCY | 1 cut(s) | 1757 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1762 |
| PshBI | ATTAAT | 1 cut(s) | 810 |
| Psp5II | RGGWCCY | 1 cut(s) | 1757 |
| Psp6I | CCWGG | 6 cut(s) | 250, 451, 1510, 1721, 2236, 2777 |
| PspFI | CCCAGC | 2 cut(s) | 2122, 2434 |
| PspGI | CCWGG | 6 cut(s) | 250, 451, 1510, 1721, 2236, 2777 |
| PspN4I | GGNNCC | 6 cut(s) | 352, 384, 1119, 2439, 2455, 2746 |
| PspOMI | GGGCCC | 1 cut(s) | 2437 |
| PspPI | GGNCC | 6 cut(s) | 350, 1719, 1757, 2327, 2437, 2438 |
| PspPPI | RGGWCCY | 1 cut(s) | 1757 |
| PstI | CTGCAG | 1 cut(s) | 2634 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1703 |
| PsuI | RGATCY | 7 cut(s) | 112, 766, 803, 1772, 1928, 2453, 2634 |
| RsaI | GTAC | 6 cut(s) | 684, 719, 730, 820, 2359, 2651 |
| RsaNI | GTAC | 6 cut(s) | 683, 718, 729, 819, 2358, 2650 |
| RseI | CAYNNNNRTG | 1 cut(s) | 528 |
| SapI | GCTCTTC | 2 cut(s) | 2424, 2792 |
| SatI | GCNGC | 6 cut(s) | 270, 416, 1404, 2598, 2630, 2674 |
| Sau96I | GGNCC | 6 cut(s) | 350, 1719, 1757, 2327, 2437, 2438 |
| SchI | GAGTC | 7 cut(s) | 1285, 1331, 2261, 2411, 2489, 2636, 2813 |
| ScrFI | CCNGG | 7 cut(s) | 252, 453, 764, 1512, 1723, 2238, 2779 |
| SduI | GDGCHC | 2 cut(s) | 2121, 2441 |
| SfaNI | GCATC | 2 cut(s) | 1415, 2380 |
| SfcI | CTRYAG | 1 cut(s) | 2630 |
| SinI | GGWCC | 4 cut(s) | 350, 1719, 1757, 2327 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 528 |
| SmlI | CTYRAG | 3 cut(s) | 653, 1623, 2183 |
| SmoI | CTYRAG | 3 cut(s) | 653, 1623, 2183 |
| SphI | GCATGC | 2 cut(s) | 296, 1403 |
| SsiI | CCGC | 4 cut(s) | 619, 863, 2126, 2598 |
| SspI | AATATT | 2 cut(s) | 27, 2008 |
| SspMI | CTAG | 5 cut(s) | 186, 230, 2078, 2861, 2902 |
| StyD4I | CCNGG | 7 cut(s) | 250, 451, 762, 1510, 1721, 2236, 2777 |
| StyI | CCWWGG | 3 cut(s) | 287, 2423, 2888 |
| TaaI | ACNGT | 6 cut(s) | 89, 786, 933, 981, 2087, 2707 |
| TaiI | ACGT | 3 cut(s) | 56, 1960, 2596 |
| TaqI | TCGA | 2 cut(s) | 1274, 2089 |
| TatI | WGTACW | 1 cut(s) | 717 |
| TauI | GCSGC | 1 cut(s) | 2600 |
| TscAI | CASTG | 3 cut(s) | 94, 271, 1488 |
| TseFI | GTSAC | 8 cut(s) | 170, 426, 519, 927, 1277, 1592, 1857, 1958 |
| TseI | GCWGC | 5 cut(s) | 269, 415, 1403, 2629, 2673 |
| Tsp45I | GTSAC | 8 cut(s) | 170, 426, 519, 927, 1277, 1592, 1857, 1958 |
| TspGWI | ACGGA | 1 cut(s) | 2466 |
| TspRI | CASTG | 3 cut(s) | 94, 271, 1488 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 347 |
| VpaK11BI | GGWCC | 4 cut(s) | 350, 1719, 1757, 2327 |
| VspI | ATTAAT | 1 cut(s) | 810 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1748 |
| XapI | RAATTY | 8 cut(s) | 10, 244, 501, 534, 674, 1056, 1295, 1544 |
| XceI | RCATGY | 3 cut(s) | 296, 1403, 1966 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 344, 1729 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1891 |
| XspI | CTAG | 5 cut(s) | 186, 230, 2078, 2861, 2902 |