AT5G64930

No description available

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
25945683 .. 25948397
2715 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G64930.1

Sequence Viewer

Length: 1695 bp
ATGGAAGCCCTCCTCCTCCCTCCTTCGCCGGAACCCCAAAATCAAATCACCAATCCGGCGAATTCAAAGCCAAATCATCAATCTGGTGACGTACATAAAGATGAGACGATGATGATGAAGAAGAAGAAGGATACGAATCCATCGAATTTGGAAAAGAGAAAACTCAAGGGAAAGAAGAAAGAGATTATGGACAACGACGAAGCTTCTTCGTCCTATTGTTCTACATCTTCTACCTCTAATTCAAATTCTACTAAAAGGGTTACGAGAGTGGTTCATAGATTACGAAACCCTATGCGGTTAGGTATGGCTCGACGAAGCGTTGGTGAACGACAAGCTGAAAAATTGGCGAAGCCTCTGGGCTTTTCACTTGCCGCTTTTGCTAATATGGTTATTGCGAGAAAGAATGCCGCAGGTCAGAATGTTTATGTTGATGATCTTGTTGAGATCTTTGCTACTCTTGTCGAAGAATCATTAGCCAATGTTTATGGTAATAAGCTTGGTTCCTTTGCGACCAACTTTGAGCAAACATTCAGCAGTACTCTAAAGATCCTTAAATTGACCAATGAATGTGCAAATCCACATCAGTCAAACAATAATGATGGTGGGAGTTGTAATTTAGATCGCTCTACCATAGACGGATGCTCAGACACCGAGCTATTTGAGAGGGAGACTTCATCTGCTACGTCTGCTTATGAAGTGATGCAAGGCAGTGCAACAGCAACCTCTTTGATGAATGAGCTTGCCCTTTTCGAAGAGACTCTACAACTCTCTTGTGTCCCTCCTAGAAGTTCAGCAATGGCTTTGACCACAGACGAAAGGTTTTTAAAAGAGCAAACACGAGCAAACGACCTAAAGACCGTGGAGATTGGTCTTCAAATAAGAGAGTTAAGGTGCAAAGAGACGGCGCTAGGATTAAAATTTGAATCAAACAACCTGGGGAAAGCGGCGCTAGAGTTGGATGTTTCGAAAGCTGCATTCAGAGCGGAGAAATTCAAAACCGAATTAGAAGATACAAGAAAAGAAGAGATGGTCACAAGAATCATGGATTGGCTCCTCGTAAGTGTCTTCAGCATGTTGGCTTCTATGGTACTTGGCGTTTACAATTTTTCAATAAAGAGAATCGAGGATGCTACCTCAGTATGCGACCAATCCGAGGAGAAAAGTTCGTCGTGGTGGGTTCCTAAACAAGTTTCATCGATTAACTCAGGCTTCAACACCTTCATCTGCCGGGTTCGAGTTTGGGTGCAGATATTTTTCGGTGTGTTAATGATCATTGTCTTCACTTACTTTCTAAACAAACGATCATCAGGTACGAAGCAGACAATGCCGATAAGTTTCATCGTTCTTTTCCTCGGTATATTTTGCGGTGTATCGGGTAAATTGTGTGTGGACACATTGGGCGGTGATGGCAAACTCTGGCTAATAGTTTGGGAAGTGTTTTGCCTTTTGCAATTCGTTGCAAATGTCTTCACATTGGCTTTGTATGGTCTAATGTTCGGTCCTATAAACGTGACTCAAGAGACCAGATCGAACCGTTGTAACAGTATGTTTCCATATTGGGCAAGGCGCAGTGTCGTGTATGTGGTGATTCTGTTTGTTCTTCCAGTCATAAACGGTCTTTTGCCATTTGCAACATTTGGTGAATGGAGAGACTTCGCTATGTATCACCTTCATGGTGGGTCTGACTATGCTTGA

Protein Analysis

564

Amino Acids

63.11

Weight (kDa)

8.33

Isoelectric Point (pI)

38.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 401
AccBSI CCGCTC 1 cut(s) 983
AciI CCGC 7 cut(s) 295, 372, 408, 944, 983, 1365, 1401
AclWI GGATC 1 cut(s) 541
AcsI RAATTY 5 cut(s) 61, 145, 244, 917, 989
AcuI CTGAAG 1 cut(s) 1051
AfaI GTAC 4 cut(s) 93, 538, 1089, 1312
AfiI CCNNNNNNNGG 1 cut(s) 1153
AgsI TTSAA 7 cut(s) 66, 243, 875, 923, 994, 1110, 1213
AjnI CCWGG 1 cut(s) 933
AjuI GAANNNNNNNTTGG 2 cut(s) 1030, 1062
AluBI AGCT 6 cut(s) 203, 335, 496, 655, 739, 971
AluI AGCT 6 cut(s) 203, 335, 496, 655, 739, 971
Alw26I GTCTC 6 cut(s) 98, 662, 749, 893, 1514, 1644
AlwI GGATC 1 cut(s) 541
ApeKI GCWGC 1 cut(s) 971
ApoI RAATTY 5 cut(s) 61, 145, 244, 917, 989
AspLEI GCGC 3 cut(s) 907, 949, 1569
AspS9I GGNCC 1 cut(s) 1499
AsuC2I CCSGG 1 cut(s) 1229
AsuHPI GGTGA 7 cut(s) 40, 98, 335, 1415, 1597, 1652, 1658
AsuII TTCGAA 2 cut(s) 750, 965
AvaII GGWCC 1 cut(s) 1499
BarI GAAGNNNNNNTAC 2 cut(s) 744, 776
BauI CACGAG 1 cut(s) 837
BbsI GAAGAC 4 cut(s) 863, 1057, 1270, 1459
BbvI GCAGC 1 cut(s) 958
BccI CCATC 4 cut(s) 148, 593, 1021, 1400
BceAI ACGGC 1 cut(s) 918
BciT130I CCWGG 1 cut(s) 935
BciVI GTATCC 1 cut(s) 124
BclI TGATCA 1 cut(s) 1269
BcnI CCSGG 1 cut(s) 1229
BcoDI GTCTC 6 cut(s) 98, 662, 749, 893, 1514, 1644
BfaI CTAG 3 cut(s) 783, 908, 950
BfoI RGCGCY 2 cut(s) 908, 950
BfuAI ACCTGC 1 cut(s) 401
BfuI GTATCC 1 cut(s) 124
BglII AGATCT 1 cut(s) 444
BisI GCNGC 4 cut(s) 372, 408, 945, 972
BlsI GCNGC 4 cut(s) 373, 409, 946, 973
BmcAI AGTACT 1 cut(s) 538
Bme1390I CCNGG 2 cut(s) 935, 1229
Bme18I GGWCC 1 cut(s) 1499
BmgT120I GGNCC 1 cut(s) 1499
BmiI GGNNCC 4 cut(s) 33, 502, 1052, 1179
BmrFI CCNGG 2 cut(s) 935, 1229
BmsI GCATC 3 cut(s) 629, 690, 1117
BpiI GAAGAC 4 cut(s) 863, 1057, 1270, 1459
Bpu14I TTCGAA 2 cut(s) 750, 965
BpuEI CTTGAG 2 cut(s) 149, 1500
BpuMI CCSGG 1 cut(s) 1229
Bsa29I ATCGAT 1 cut(s) 1196
BsaBI GATNNNNATC 1 cut(s) 135
BsaI GGTCTC 1 cut(s) 1514
BsaJI CCNNGG 4 cut(s) 858, 934, 1152, 1351
Bsc4I CCNNNNNNNGG 1 cut(s) 1153
Bse1I ACTGG 1 cut(s) 1604
Bse3DI GCAATG 1 cut(s) 801
Bse8I GATNNNNATC 1 cut(s) 135
BseBI CCWGG 1 cut(s) 935
BseCI ATCGAT 1 cut(s) 1196
BseDI CCNNGG 4 cut(s) 858, 934, 1152, 1351
BseGI GGATG 3 cut(s) 644, 964, 1132
BseJI GATNNNNATC 1 cut(s) 135
BseLI CCNNNNNNNGG 1 cut(s) 1153
BseMI GCAATG 1 cut(s) 801
BseMII CTCAG 3 cut(s) 657, 1149, 1218
BseNI ACTGG 1 cut(s) 1604
BseRI GAGGAG 3 cut(s) 5, 1043, 1169
BseXI GCAGC 1 cut(s) 958
BsgI GTGCAG 1 cut(s) 1265
BshVI ATCGAT 1 cut(s) 1196
BsiSI CCGG 3 cut(s) 29, 56, 1228
BslFI GGGAC 1 cut(s) 761
BslI CCNNNNNNNGG 1 cut(s) 1153
BsmAI GTCTC 6 cut(s) 98, 662, 749, 893, 1514, 1644
BsmBI CGTCTC 2 cut(s) 98, 893
BsmFI GGGAC 1 cut(s) 761
BsmI GAATGC 2 cut(s) 409, 974
Bso31I GGTCTC 1 cut(s) 1514
Bsp119I TTCGAA 2 cut(s) 750, 965
Bsp143I GATC 7 cut(s) 433, 444, 546, 619, 1269, 1301, 1526
BspACI CCGC 7 cut(s) 295, 372, 408, 944, 983, 1365, 1401
BspCNI CTCAG 3 cut(s) 656, 1148, 1217
BspDI ATCGAT 1 cut(s) 1196
BspLI GGNNCC 4 cut(s) 33, 502, 1052, 1179
BspMI ACCTGC 1 cut(s) 401
BspPI GGATC 1 cut(s) 541
BspT104I TTCGAA 2 cut(s) 750, 965
BspTNI GGTCTC 1 cut(s) 1514
BsrBI CCGCTC 1 cut(s) 983
BsrDI GCAATG 1 cut(s) 801
BsrI ACTGG 1 cut(s) 1604
BssECI CCNNGG 4 cut(s) 858, 934, 1152, 1351
BssMI GATC 7 cut(s) 433, 444, 546, 619, 1269, 1301, 1526
BssSI CACGAG 1 cut(s) 837
Bst2BI CACGAG 1 cut(s) 837
Bst2UI CCWGG 1 cut(s) 935
Bst4CI ACNGT 4 cut(s) 859, 1535, 1544, 1616
Bst6I CTCTTC 2 cut(s) 747, 1017
BstAPI GCANNNNNTGC 1 cut(s) 1324
BstBI TTCGAA 2 cut(s) 750, 965
BstC8I GCNNGC 1 cut(s) 741
BstDEI CTNAG 3 cut(s) 643, 1135, 1204
BstDSI CCRYGG 1 cut(s) 858
BstF5I GGATG 3 cut(s) 644, 964, 1132
BstH2I RGCGCY 2 cut(s) 908, 950
BstHHI GCGC 3 cut(s) 907, 949, 1569
BstKTI GATC 7 cut(s) 436, 447, 549, 622, 1272, 1304, 1529
BstMAI GTCTC 6 cut(s) 98, 662, 749, 893, 1514, 1644
BstMBI GATC 7 cut(s) 433, 444, 546, 619, 1269, 1301, 1526
BstMWI GCNNNNNNNGC 5 cut(s) 377, 686, 980, 1324, 1407
BstNI CCWGG 1 cut(s) 935
BstNSI RCATGY 1 cut(s) 1075
BstSCI CCNGG 2 cut(s) 933, 1227
BstV1I GCAGC 1 cut(s) 958
BstV2I GAAGAC 4 cut(s) 863, 1057, 1270, 1459
BstX2I RGATCY 2 cut(s) 444, 546
BstYI RGATCY 2 cut(s) 444, 546
Bsu15I ATCGAT 1 cut(s) 1196
BsuI GTATCC 1 cut(s) 124
BsuTUI ATCGAT 1 cut(s) 1196
BtgI CCRYGG 1 cut(s) 858
BtsCI GGATG 3 cut(s) 644, 964, 1132
BtsI GCAGTG 2 cut(s) 715, 1576
BtsIMutI CAGTG 2 cut(s) 715, 1576
BveI ACCTGC 1 cut(s) 401
Cac8I GCNNGC 1 cut(s) 741
CfoI GCGC 3 cut(s) 907, 949, 1569
Cfr13I GGNCC 1 cut(s) 1499
ClaI ATCGAT 1 cut(s) 1196
Csp6I GTAC 4 cut(s) 92, 537, 1088, 1311
CviAII CATG 3 cut(s) 1042, 1072, 1673
CviQI GTAC 4 cut(s) 92, 537, 1088, 1311
DdeI CTNAG 3 cut(s) 643, 1135, 1204
DpnI GATC 7 cut(s) 435, 446, 548, 621, 1271, 1303, 1528
DpnII GATC 7 cut(s) 433, 444, 546, 619, 1269, 1301, 1526
DraI TTTAAA 1 cut(s) 825
Eam1104I CTCTTC 2 cut(s) 747, 1017
EarI CTCTTC 2 cut(s) 747, 1017
Eco31I GGTCTC 1 cut(s) 1514
Eco47I GGWCC 1 cut(s) 1499
Eco57I CTGAAG 1 cut(s) 1051
EcoRI GAATTC 1 cut(s) 61
EcoRII CCWGG 1 cut(s) 933
Esp3I CGTCTC 2 cut(s) 98, 893
FaeI CATG 3 cut(s) 1045, 1075, 1676
FaqI GGGAC 1 cut(s) 761
FatI CATG 3 cut(s) 1041, 1071, 1672
FbaI TGATCA 1 cut(s) 1269
Fnu4HI GCNGC 4 cut(s) 372, 408, 945, 972
FokI GGATG 3 cut(s) 651, 971, 1139
Fsp4HI GCNGC 4 cut(s) 372, 408, 945, 972
FspBI CTAG 3 cut(s) 783, 908, 950
GlaI GCGC 3 cut(s) 906, 948, 1568
GluI GCNGC 4 cut(s) 372, 408, 945, 972
HaeII RGCGCY 2 cut(s) 908, 950
HapII CCGG 3 cut(s) 29, 56, 1228
HhaI GCGC 3 cut(s) 907, 949, 1569
Hin1II CATG 3 cut(s) 1045, 1075, 1676
Hin6I GCGC 3 cut(s) 905, 947, 1567
HinP1I GCGC 3 cut(s) 905, 947, 1567
HindIII AAGCTT 2 cut(s) 201, 494
HinfI GANTC 8 cut(s) 136, 467, 757, 923, 1038, 1119, 1513, 1588
HpaII CCGG 3 cut(s) 29, 56, 1228
HphI GGTGA 7 cut(s) 40, 98, 335, 1415, 1597, 1652, 1658
Hpy166II GTNNAC 3 cut(s) 326, 1099, 1390
Hpy188I TCNGA 5 cut(s) 417, 646, 980, 1153, 1684
Hpy188III TCNNGA 1 cut(s) 1517
Hpy8I GTNNAC 3 cut(s) 326, 1099, 1390
Hpy99I CGWCG 3 cut(s) 200, 315, 1171
HpyAV CCTTC 4 cut(s) 33, 121, 1228, 1679
HpyCH4III ACNGT 4 cut(s) 859, 1535, 1544, 1616
HpyCH4IV ACGT 3 cut(s) 90, 683, 1509
HpyCH4V TGCA 9 cut(s) 572, 703, 713, 894, 974, 1246, 1450, 1460, 1631
HpyF10VI GCNNNNNNNGC 5 cut(s) 377, 686, 980, 1324, 1407
HpyF3I CTNAG 3 cut(s) 643, 1135, 1204
HpySE526I ACGT 3 cut(s) 90, 683, 1509
Hsp92II CATG 3 cut(s) 1045, 1075, 1676
HspAI GCGC 3 cut(s) 905, 947, 1567
Ksp22I TGATCA 1 cut(s) 1269
Kzo9I GATC 7 cut(s) 433, 444, 546, 619, 1269, 1301, 1526
LmnI GCTCC 1 cut(s) 1056
Lsp1109I GCAGC 1 cut(s) 958
LweI GCATC 3 cut(s) 629, 690, 1117
MaeI CTAG 3 cut(s) 783, 908, 950
MaeII ACGT 3 cut(s) 90, 683, 1509
MaeIII GTNAC 5 cut(s) 86, 259, 1030, 1510, 1538
MalI GATC 7 cut(s) 435, 446, 548, 621, 1271, 1303, 1528
MbiI CCGCTC 1 cut(s) 983
MboI GATC 7 cut(s) 433, 444, 546, 619, 1269, 1301, 1526
MflI RGATCY 2 cut(s) 444, 546
MlyI GAGTC 2 cut(s) 751, 1507
MmeI TCCRAC 1 cut(s) 936
MseI TTAA 6 cut(s) 552, 824, 887, 914, 1200, 1265
MslI CAYNNNNRTG 2 cut(s) 99, 1671
MspI CCGG 3 cut(s) 29, 56, 1228
MspR9I CCNGG 2 cut(s) 935, 1229
Mva1269I GAATGC 2 cut(s) 409, 974
MvaI CCWGG 1 cut(s) 935
MwoI GCNNNNNNNGC 5 cut(s) 377, 686, 980, 1324, 1407
NciI CCSGG 1 cut(s) 1229
NdeII GATC 7 cut(s) 433, 444, 546, 619, 1269, 1301, 1526
NlaIII CATG 3 cut(s) 1045, 1075, 1676
NlaIV GGNNCC 4 cut(s) 33, 502, 1052, 1179
NmuCI GTSAC 3 cut(s) 86, 1030, 1510
NspI RCATGY 1 cut(s) 1075
NspV TTCGAA 2 cut(s) 750, 965
PcsI WCGNNNNNNNCGW 1 cut(s) 140
PctI GAATGC 2 cut(s) 409, 974
PfeI GAWTC 6 cut(s) 136, 467, 923, 1038, 1119, 1588
PkrI GCNGC 4 cut(s) 373, 409, 946, 973
PleI GAGTC 2 cut(s) 751, 1507
PpsI GAGTC 2 cut(s) 751, 1507
Psp6I CCWGG 1 cut(s) 933
PspGI CCWGG 1 cut(s) 933
PspN4I GGNNCC 4 cut(s) 33, 502, 1052, 1179
PspPI GGNCC 1 cut(s) 1499
PsuI RGATCY 2 cut(s) 444, 546
RsaI GTAC 4 cut(s) 93, 538, 1089, 1312
RsaNI GTAC 4 cut(s) 92, 537, 1088, 1311
RseI CAYNNNNRTG 2 cut(s) 99, 1671
SaqAI TTAA 6 cut(s) 552, 824, 887, 914, 1200, 1265
SatI GCNGC 4 cut(s) 372, 408, 945, 972
Sau3AI GATC 7 cut(s) 433, 444, 546, 619, 1269, 1301, 1526
Sau96I GGNCC 1 cut(s) 1499
ScaI AGTACT 1 cut(s) 538
SchI GAGTC 2 cut(s) 751, 1507
ScrFI CCNGG 2 cut(s) 935, 1229
SfaNI GCATC 3 cut(s) 629, 690, 1117
SfuI TTCGAA 2 cut(s) 750, 965
SinI GGWCC 1 cut(s) 1499
SmiMI CAYNNNNRTG 2 cut(s) 99, 1671
SmlI CTYRAG 2 cut(s) 164, 1515
SmoI CTYRAG 2 cut(s) 164, 1515
SsiI CCGC 7 cut(s) 295, 372, 408, 944, 983, 1365, 1401
SspMI CTAG 3 cut(s) 783, 908, 950
StyD4I CCNGG 2 cut(s) 933, 1227
TaaI ACNGT 4 cut(s) 859, 1535, 1544, 1616
TaiI ACGT 3 cut(s) 93, 686, 1512
TaqI TCGA 9 cut(s) 143, 310, 462, 750, 965, 1122, 1196, 1234, 1529
TaqII GACCGA 1 cut(s) 1487
TatI WGTACW 1 cut(s) 536
TauI GCSGC 3 cut(s) 374, 410, 947
TfiI GAWTC 6 cut(s) 136, 467, 923, 1038, 1119, 1588
Tru1I TTAA 6 cut(s) 552, 824, 887, 914, 1200, 1265
Tru9I TTAA 6 cut(s) 552, 824, 887, 914, 1200, 1265
TscAI CASTG 2 cut(s) 715, 1576
TseFI GTSAC 3 cut(s) 86, 1030, 1510
TseI GCWGC 1 cut(s) 971
Tsp45I GTSAC 3 cut(s) 86, 1030, 1510
TspGWI ACGGA 1 cut(s) 651
TspRI CASTG 2 cut(s) 715, 1576
VpaK11BI GGWCC 1 cut(s) 1499
XapI RAATTY 5 cut(s) 61, 145, 244, 917, 989
XceI RCATGY 1 cut(s) 1075
XspI CTAG 3 cut(s) 783, 908, 950
ZrmI AGTACT 1 cut(s) 538
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.