Rh2DG268700

CPR-5-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Forward (+)
29315698 .. 29321064
5367 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG268700.1

Sequence Viewer

Length: 1353 bp
ATGTCTTCTGATCATCTGGCTAAGATATGTGCTTCAGCTGTCAGAGGATCGTTTGCTAATGATTTCGGGAACACATTTGATTGTTTTATCCAGAACTTTGAACAATCATTTGGGAGCACCTTAAGAACTCTAAAGTTGATCAAAGAATCATCCGAAGATAACACAGGATATCTCTCCAGCAAGCAAAACATAGAAGAATATAGTCCACGTGTCACTCATGACGAACAAGATGACTGTCTAAGAGGGGAAGCTTGTAGAAGCAGTTCCAGTACAGAAGATTATCACTCAAAAGAAGTGACCCACACTACTGCAACTGAGGGTCGATTAAATTATAGAGATCAATTGCATCAGAATATGCTGACAAACCCTGTTAACCTGGAGGTTGCCCTGCATGGCCAAATCAATCAATTGACTTGTATTCCCCCGAGAACTGTTGACCCTGTGACCAACCAATCCATGTTTAATACTTTTGAGAAATCTGTCATGGAGCAAACTCGTGCTAATGAGCTGAAGATTTGGGAGCTTGGTCTGGCAATGAAGAAGTTGTCGTTGAAAGAGGAACAAGTGGCTCTAGGTCATGATTCAAATCATTTGGAGAGATCAAAAATAGCTATGGGCAGATCAAAGGCATCCTTCAAAGCTGAAAAATTTAAGACTCAATTAGAAGACACAAGACACTCTGAGCTCCTTAGGACGTGCATTGACTGTCTAGTTGCTGGATTATTGGTCATGGCTGCAGCCCTGTCTTATGGTACTTACATATATTCATACAGAAGGATTACGGAAGCCACTGCATCATGTACACCTGCAAAGGATTCAAAGTCTTGGTGGAATCCCATGGCATCTGTCAATTTGGGCTTTCAAGTTCTAAGGTGTCAAGCTGAGGTAGTGAGTCGGATGGTGTTTGGTTTCTTCATGATTTTTGCAATTGCTTATTTGATCCTCCAGCGCTCAGCAGTTTCGAAACAGACAATGCCAGTTACTTTCATAGTCTTGCTGTTGGGAATTGCCTGTGGTTGGGCCGGCAAGTTTTGTGTAGACACATTGGGAGGGAGTGGATATCACTGGCTTGTATATTGGGAGACTCTATGCCTCGTGCATTTCTTCTGCAATGTTTTTACATCAGTTTTGTTCCATATCCTGCATGGACCCATTGATGTGTCTCCAGGGACAAAAGGAAACTCAGTATTTCCTTACTGGATACGCAGATTGGTGTTCTACGGTATTACATTCCTGTTTCTGCCATTGCTTTGTGGCCTTTTGCCTTTTGCGAGCCTTGCTGAATGGAAGCACCATTTCTTGCTGCTGGTTGCTGATGTTGATTACTGGGTTGGAACAGGAGGTATCTTCTGA

Protein Analysis

450

Amino Acids

50.71

Weight (kDa)

6.73

Isoelectric Point (pI)

38.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 814
Acc36I ACCTGC 1 cut(s) 814
AccI GTMKAC 1 cut(s) 1038
AclWI GGATC 2 cut(s) 55, 934
AcoI YGGCCR 1 cut(s) 394
AcsI RAATTY 1 cut(s) 647
AcuI CTGAAG 2 cut(s) 18, 530
AcvI CACGTG 1 cut(s) 209
AfaI GTAC 3 cut(s) 271, 754, 802
AfeI AGCGCT 1 cut(s) 950
AfiI CCNNNNNNNGG 1 cut(s) 1017
AflII CTTAAG 1 cut(s) 121
AflIII ACRYGT 1 cut(s) 208
AgsI TTSAA 6 cut(s) 101, 553, 585, 637, 819, 863
AjiI CACGTC 1 cut(s) 696
AjnI CCWGG 2 cut(s) 375, 1165
AjuI GAANNNNNNNTTGG 2 cut(s) 93, 125
AluBI AGCT 8 cut(s) 38, 251, 508, 523, 611, 641, 685, 881
AluI AGCT 8 cut(s) 38, 251, 508, 523, 611, 641, 685, 881
Alw21I GWGCWC 2 cut(s) 119, 687
Alw26I GTCTC 2 cut(s) 1076, 1167
AlwI GGATC 2 cut(s) 55, 934
Ama87I CYCGRG 1 cut(s) 424
Aor51HI AGCGCT 1 cut(s) 950
AoxI GGCC 3 cut(s) 394, 1020, 1255
ApeKI GCWGC 3 cut(s) 734, 737, 1303
ApoI RAATTY 1 cut(s) 647
Asp700I GAANNNNTTC 1 cut(s) 262
AspLEI GCGC 1 cut(s) 951
AspS9I GGNCC 2 cut(s) 1020, 1148
AsuII TTCGAA 1 cut(s) 962
AvaI CYCGRG 1 cut(s) 424
AvaII GGWCC 1 cut(s) 1148
AxyI CCTNAGG 1 cut(s) 689
BalI TGGCCA 1 cut(s) 396
BanII GRGCYC 1 cut(s) 687
BauI CACGAG 2 cut(s) 495, 1094
BbrPI CACGTG 1 cut(s) 209
BbsI GAAGAC 1 cut(s) 672
Bbv12I GWGCWC 2 cut(s) 119, 687
BbvCI CCTCAGC 1 cut(s) 882
BbvI GCAGC 3 cut(s) 721, 749, 1290
BccI CCATC 1 cut(s) 892
BciT130I CCWGG 2 cut(s) 377, 1167
BciVI GTATCC 1 cut(s) 1194
BclI TGATCA 2 cut(s) 10, 138
BcoDI GTCTC 2 cut(s) 1076, 1167
BfaI CTAG 2 cut(s) 572, 710
BfmI CTRYAG 1 cut(s) 735
BfoI RGCGCY 1 cut(s) 952
BfrI CTTAAG 1 cut(s) 121
BfuAI ACCTGC 1 cut(s) 814
BfuI GTATCC 1 cut(s) 1194
BisI GCNGC 3 cut(s) 735, 738, 1304
BlpI GCTNAGC 1 cut(s) 952
BlsI GCNGC 3 cut(s) 736, 739, 1305
Bme1390I CCNGG 2 cut(s) 377, 1167
Bme18I GGWCC 1 cut(s) 1148
BmeT110I CYCGRG 1 cut(s) 424
BmgBI CACGTC 1 cut(s) 696
BmgT120I GGNCC 2 cut(s) 1020, 1148
BmiI GGNNCC 1 cut(s) 1150
BmrFI CCNGG 2 cut(s) 377, 1167
BmrI ACTGGG 1 cut(s) 1336
BmsI GCATC 4 cut(s) 355, 638, 803, 851
BmuI ACTGGG 1 cut(s) 1336
BpiI GAAGAC 1 cut(s) 672
BpmI CTGGAG 4 cut(s) 160, 398, 929, 1149
Bpu10I CCTNAGC 1 cut(s) 882
Bpu1102I GCTNAGC 1 cut(s) 952
Bpu14I TTCGAA 1 cut(s) 962
BsaAI YACGTR 1 cut(s) 209
BsaBI GATNNNNATC 1 cut(s) 585
BsaJI CCNNGG 2 cut(s) 837, 1166
Bsc4I CCNNNNNNNGG 1 cut(s) 1017
Bse118I RCCGGY 1 cut(s) 1022
Bse1I ACTGG 5 cut(s) 267, 977, 1070, 1202, 1331
Bse21I CCTNAGG 1 cut(s) 689
Bse3DI GCAATG 3 cut(s) 540, 1117, 1244
Bse8I GATNNNNATC 1 cut(s) 585
BseBI CCWGG 2 cut(s) 377, 1167
BseDI CCNNGG 2 cut(s) 837, 1166
BseGI GGATG 3 cut(s) 149, 629, 903
BseJI GATNNNNATC 1 cut(s) 585
BseLI CCNNNNNNNGG 1 cut(s) 1017
BseMI GCAATG 3 cut(s) 540, 1117, 1244
BseMII CTCAG 5 cut(s) 306, 672, 873, 966, 1197
BseNI ACTGG 5 cut(s) 267, 977, 1070, 1202, 1331
BseXI GCAGC 3 cut(s) 721, 749, 1290
BshFI GGCC 3 cut(s) 396, 1022, 1257
BsiHKAI GWGCWC 2 cut(s) 119, 687
BsiHKCI CYCGRG 1 cut(s) 424
BsiSI CCGG 1 cut(s) 1023
BslFI GGGAC 1 cut(s) 1183
BslI CCNNNNNNNGG 1 cut(s) 1017
BsmAI GTCTC 2 cut(s) 1076, 1167
BsmFI GGGAC 1 cut(s) 1183
BsnI GGCC 3 cut(s) 396, 1022, 1257
BsoBI CYCGRG 1 cut(s) 424
Bsp119I TTCGAA 1 cut(s) 962
Bsp1286I GDGCHC 2 cut(s) 119, 687
Bsp1407I TGTACA 1 cut(s) 800
Bsp143I GATC 7 cut(s) 10, 47, 138, 337, 599, 620, 939
Bsp1720I GCTNAGC 1 cut(s) 952
Bsp19I CCATGG 1 cut(s) 837
BspANI GGCC 3 cut(s) 396, 1022, 1257
BspCNI CTCAG 5 cut(s) 307, 673, 874, 965, 1196
BspHI TCATGA 3 cut(s) 217, 577, 915
BspLI GGNNCC 1 cut(s) 1150
BspMAI CTGCAG 1 cut(s) 739
BspMI ACCTGC 1 cut(s) 814
BspPI GGATC 2 cut(s) 55, 934
BspT104I TTCGAA 1 cut(s) 962
BspTI CTTAAG 1 cut(s) 121
BsrDI GCAATG 3 cut(s) 540, 1117, 1244
BsrFI RCCGGY 1 cut(s) 1022
BsrGI TGTACA 1 cut(s) 800
BsrI ACTGG 5 cut(s) 267, 977, 1070, 1202, 1331
BssAI RCCGGY 1 cut(s) 1022
BssECI CCNNGG 2 cut(s) 837, 1166
BssMI GATC 7 cut(s) 10, 47, 138, 337, 599, 620, 939
BssSI CACGAG 2 cut(s) 495, 1094
BssT1I CCWWGG 1 cut(s) 837
Bst2BI CACGAG 2 cut(s) 495, 1094
Bst2UI CCWGG 2 cut(s) 377, 1167
Bst4CI ACNGT 4 cut(s) 236, 433, 707, 1223
BstAFI CTTAAG 1 cut(s) 121
BstAUI TGTACA 1 cut(s) 800
BstBAI YACGTR 1 cut(s) 209
BstBI TTCGAA 1 cut(s) 962
BstC8I GCNNGC 3 cut(s) 182, 1024, 1273
BstDEI CTNAG 9 cut(s) 21, 239, 315, 681, 689, 869, 882, 952, 1183
BstDSI CCRYGG 1 cut(s) 837
BstF5I GGATG 3 cut(s) 149, 629, 903
BstH2I RGCGCY 1 cut(s) 952
BstHHI GCGC 1 cut(s) 951
BstKTI GATC 7 cut(s) 13, 50, 141, 340, 602, 623, 942
BstMAI GTCTC 2 cut(s) 1076, 1167
BstMBI GATC 7 cut(s) 10, 47, 138, 337, 599, 620, 939
BstMWI GCNNNNNNNGC 1 cut(s) 1277
BstNI CCWGG 2 cut(s) 377, 1167
BstSCI CCNGG 2 cut(s) 375, 1165
BstSFI CTRYAG 1 cut(s) 735
BstV1I GCAGC 3 cut(s) 721, 749, 1290
BstV2I GAAGAC 1 cut(s) 672
Bsu36I CCTNAGG 1 cut(s) 689
BsuI GTATCC 1 cut(s) 1194
BsuRI GGCC 3 cut(s) 396, 1022, 1257
BtgI CCRYGG 1 cut(s) 837
BtrI CACGTC 1 cut(s) 696
BtsCI GGATG 3 cut(s) 149, 629, 903
BtsI GCAGTG 1 cut(s) 789
BtsIMutI CAGTG 2 cut(s) 789, 1063
BveI ACCTGC 1 cut(s) 814
Cac8I GCNNGC 3 cut(s) 182, 1024, 1273
CciI TCATGA 3 cut(s) 217, 577, 915
CfoI GCGC 1 cut(s) 951
Cfr10I RCCGGY 1 cut(s) 1022
Cfr13I GGNCC 2 cut(s) 1020, 1148
Csp6I GTAC 3 cut(s) 270, 753, 801
CviQI GTAC 3 cut(s) 270, 753, 801
DdeI CTNAG 9 cut(s) 21, 239, 315, 681, 689, 869, 882, 952, 1183
DpnI GATC 7 cut(s) 12, 49, 140, 339, 601, 622, 941
DpnII GATC 7 cut(s) 10, 47, 138, 337, 599, 620, 939
EaeI YGGCCR 1 cut(s) 394
Ecl136II GAGCTC 1 cut(s) 685
Eco130I CCWWGG 1 cut(s) 837
Eco24I GRGCYC 1 cut(s) 687
Eco32I GATATC 2 cut(s) 170, 1061
Eco47I GGWCC 1 cut(s) 1148
Eco47III AGCGCT 1 cut(s) 950
Eco53kI GAGCTC 1 cut(s) 685
Eco57I CTGAAG 2 cut(s) 18, 530
Eco72I CACGTG 1 cut(s) 209
Eco81I CCTNAGG 1 cut(s) 689
Eco88I CYCGRG 1 cut(s) 424
EcoICRI GAGCTC 1 cut(s) 685
EcoRII CCWGG 2 cut(s) 375, 1165
EcoRV GATATC 2 cut(s) 170, 1061
EcoT14I CCWWGG 1 cut(s) 837
EcoT38I GRGCYC 1 cut(s) 687
ErhI CCWWGG 1 cut(s) 837
FalI AAGNNNNNCTT 2 cut(s) 617, 649
FaqI GGGAC 1 cut(s) 1183
FbaI TGATCA 2 cut(s) 10, 138
FblI GTMKAC 1 cut(s) 1038
Fnu4HI GCNGC 3 cut(s) 735, 738, 1304
FokI GGATG 3 cut(s) 136, 616, 910
FriOI GRGCYC 1 cut(s) 687
Fsp4HI GCNGC 3 cut(s) 735, 738, 1304
FspBI CTAG 2 cut(s) 572, 710
GlaI GCGC 1 cut(s) 950
GluI GCNGC 3 cut(s) 735, 738, 1304
GsuI CTGGAG 4 cut(s) 160, 398, 929, 1149
HaeII RGCGCY 1 cut(s) 952
HaeIII GGCC 3 cut(s) 396, 1022, 1257
HapII CCGG 1 cut(s) 1023
HhaI GCGC 1 cut(s) 951
Hin6I GCGC 1 cut(s) 949
HinP1I GCGC 1 cut(s) 949
HincII GTYRAC 2 cut(s) 373, 436
HindII GTYRAC 2 cut(s) 373, 436
HindIII AAGCTT 1 cut(s) 249
HinfI GANTC 7 cut(s) 146, 581, 655, 815, 832, 892, 1084
HpaI GTTAAC 1 cut(s) 373
HpaII CCGG 1 cut(s) 1023
Hpy166II GTNNAC 5 cut(s) 206, 373, 436, 803, 1039
Hpy188I TCNGA 7 cut(s) 10, 44, 154, 351, 682, 897, 1352
Hpy188III TCNNGA 5 cut(s) 67, 91, 218, 578, 916
Hpy8I GTNNAC 5 cut(s) 206, 373, 436, 803, 1039
HpyAV CCTTC 2 cut(s) 643, 768
HpyCH4III ACNGT 4 cut(s) 236, 433, 707, 1223
HpyCH4IV ACGT 2 cut(s) 208, 695
HpyF10VI GCNNNNNNNGC 1 cut(s) 1277
HpyF3I CTNAG 9 cut(s) 21, 239, 315, 681, 689, 869, 882, 952, 1183
HpySE526I ACGT 2 cut(s) 208, 695
HspAI GCGC 1 cut(s) 949
KroI GCCGGC 1 cut(s) 1022
KroNI GCCGGC 1 cut(s) 1024
Ksp22I TGATCA 2 cut(s) 10, 138
KspAI GTTAAC 1 cut(s) 373
Kzo9I GATC 7 cut(s) 10, 47, 138, 337, 599, 620, 939
LmnI GCTCC 4 cut(s) 114, 487, 520, 690
Lsp1109I GCAGC 3 cut(s) 721, 749, 1290
LweI GCATC 4 cut(s) 355, 638, 803, 851
MaeI CTAG 2 cut(s) 572, 710
MaeII ACGT 2 cut(s) 208, 695
MaeIII GTNAC 4 cut(s) 211, 295, 442, 979
MalI GATC 7 cut(s) 12, 49, 140, 339, 601, 622, 941
MboI GATC 7 cut(s) 10, 47, 138, 337, 599, 620, 939
MboII GAAGA 9 cut(s) 167, 206, 287, 523, 550, 677, 904, 1096, 1339
MfeI CAATTG 3 cut(s) 341, 407, 927
MhlI GDGCHC 2 cut(s) 119, 687
MlsI TGGCCA 1 cut(s) 396
MluCI AATT 8 cut(s) 328, 341, 407, 647, 659, 850, 927, 1005
MluNI TGGCCA 1 cut(s) 396
MlyI GAGTC 3 cut(s) 649, 901, 1078
MmeI TCCRAC 2 cut(s) 875, 1312
Mox20I TGGCCA 1 cut(s) 396
MroNI GCCGGC 1 cut(s) 1022
MroXI GAANNNNTTC 1 cut(s) 262
MscI TGGCCA 1 cut(s) 396
MseI TTAA 5 cut(s) 122, 326, 372, 462, 651
MslI CAYNNNNRTG 1 cut(s) 1157
Msp20I TGGCCA 1 cut(s) 396
MspA1I CMGCKG 1 cut(s) 38
MspCI CTTAAG 1 cut(s) 121
MspI CCGG 1 cut(s) 1023
MspR9I CCNGG 2 cut(s) 377, 1167
MunI CAATTG 3 cut(s) 341, 407, 927
MvaI CCWGG 2 cut(s) 377, 1167
MwoI GCNNNNNNNGC 1 cut(s) 1277
NaeI GCCGGC 1 cut(s) 1024
NcoI CCATGG 1 cut(s) 837
NdeII GATC 7 cut(s) 10, 47, 138, 337, 599, 620, 939
NgoMIV GCCGGC 1 cut(s) 1022
NlaIV GGNNCC 1 cut(s) 1150
NmuCI GTSAC 3 cut(s) 211, 295, 442
NspV TTCGAA 1 cut(s) 962
PagI TCATGA 3 cut(s) 217, 577, 915
PaqCI CACCTGC 1 cut(s) 814
PdiI GCCGGC 1 cut(s) 1024
PdmI GAANNNNTTC 1 cut(s) 262
PfeI GAWTC 4 cut(s) 146, 581, 815, 832
PkrI GCNGC 3 cut(s) 736, 739, 1305
PleI GAGTC 3 cut(s) 649, 900, 1078
PmaCI CACGTG 1 cut(s) 209
PmlI CACGTG 1 cut(s) 209
PpsI GAGTC 3 cut(s) 649, 900, 1078
Ppu21I YACGTR 1 cut(s) 209
Psp124BI GAGCTC 1 cut(s) 687
Psp6I CCWGG 2 cut(s) 375, 1165
PspCI CACGTG 1 cut(s) 209
PspGI CCWGG 2 cut(s) 375, 1165
PspN4I GGNNCC 1 cut(s) 1150
PspPI GGNCC 2 cut(s) 1020, 1148
PsrI GAACNNNNNNTAC 2 cut(s) 247, 279
PstI CTGCAG 1 cut(s) 739
PvuII CAGCTG 1 cut(s) 38
RsaI GTAC 3 cut(s) 271, 754, 802
RsaNI GTAC 3 cut(s) 270, 753, 801
RseI CAYNNNNRTG 1 cut(s) 1157
SacI GAGCTC 1 cut(s) 687
SaqAI TTAA 5 cut(s) 122, 326, 372, 462, 651
SatI GCNGC 3 cut(s) 735, 738, 1304
Sau3AI GATC 7 cut(s) 10, 47, 138, 337, 599, 620, 939
Sau96I GGNCC 2 cut(s) 1020, 1148
SchI GAGTC 3 cut(s) 649, 901, 1078
ScrFI CCNGG 2 cut(s) 377, 1167
SduI GDGCHC 2 cut(s) 119, 687
SfaNI GCATC 4 cut(s) 355, 638, 803, 851
SfcI CTRYAG 1 cut(s) 735
SfuI TTCGAA 1 cut(s) 962
SinI GGWCC 1 cut(s) 1148
SmiMI CAYNNNNRTG 1 cut(s) 1157
SmlI CTYRAG 1 cut(s) 121
SmoI CTYRAG 1 cut(s) 121
Sse9I AATT 8 cut(s) 328, 341, 407, 647, 659, 850, 927, 1005
SspMI CTAG 2 cut(s) 572, 710
SstI GAGCTC 1 cut(s) 687
StyD4I CCNGG 2 cut(s) 375, 1165
StyI CCWWGG 1 cut(s) 837
TaaI ACNGT 4 cut(s) 236, 433, 707, 1223
TaiI ACGT 2 cut(s) 211, 698
TaqI TCGA 2 cut(s) 322, 962
TasI AATT 8 cut(s) 328, 341, 407, 647, 659, 850, 927, 1005
TatI WGTACW 2 cut(s) 269, 800
TfiI GAWTC 4 cut(s) 146, 581, 815, 832
Tru1I TTAA 5 cut(s) 122, 326, 372, 462, 651
Tru9I TTAA 5 cut(s) 122, 326, 372, 462, 651
TscAI CASTG 2 cut(s) 796, 1070
TseFI GTSAC 3 cut(s) 211, 295, 442
TseI GCWGC 3 cut(s) 734, 737, 1303
Tsp45I GTSAC 3 cut(s) 211, 295, 442
TspDTI ATGAA 4 cut(s) 551, 756, 904, 976
TspGWI ACGGA 1 cut(s) 797
TspRI CASTG 2 cut(s) 796, 1070
Vha464I CTTAAG 1 cut(s) 121
VpaK11BI GGWCC 1 cut(s) 1148
XapI RAATTY 1 cut(s) 647
XcmI CCANNNNNNNNNTGG 1 cut(s) 1142
XmiI GTMKAC 1 cut(s) 1038
XmnI GAANNNNTTC 1 cut(s) 262
XspI CTAG 2 cut(s) 572, 710
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.