Rh2BG271600

CPR-5-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
29419111 .. 29424393
5283 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG271600.1

Sequence Viewer

Length: 1218 bp
ATGGACCCACCTTCCTCTCTTCAACCCCCCCATCTCTCCGCCGCCGCCAACCACCATGAAAACTCAATCCCCGCCGTCGATCATAGTAAGAAGAAGGGGAAGAAAAAGCTATTCAAGGACGGCGCTTCGGTCGCGTCCTCCTCCTCCTCCTCTTCTGCTTCCACTTCTTCGGGCTTCTCTGTAAGAGGAGCCGCGCGCGTGACGGTCAAGCGCCGAGCGCAGAAGGTGGTTGTCAATGCGGCGCGGCGGAGCCCTAATTCCGATGATATAGGGTTTCGGTTGGGGATGTCAGTGGCGGTGTTTGTAAACCAGATTCTGGAAAGGAATGGTGAGCTAGGTGGAGGGATGTCTTCTGATCATCTTGCTAAGATATGTGCTTCAGCTGTCAGAGGATCATTTGCTAATGAGTTCGGGAACACGTTTGATTGTTTTATCCAGAACTTTGAACAATCATTTGGGAGCACCTTAAGAACTCTAAAGTCGATCAAAGAATCATCTGAAGATAACACAGGATATCTCTCCAGCAAGCCAAACATAGAAGAACATAGTCCGCGTGTCACTCATGATGAACAAGATGACTGTCTAAGAGGGGAAGCTTGTAGAAGCAGTTCCAGTACTGAAGATTATCACTCAAAAGAAGCGACCCACACTACTGCAACTGAGGGTCGATTAAATTATAGAGATCAATTGCATCAGAATATGCTGACAAACCCTGTTAACCTGGAGGTTGCCCTGCATGGCCAAATCAATCAATTGACTTGTATTCCCCCGAGAACTGTTGACCCCATGACCAACCAATTCATGTATAATACTTTTGAGAAATCTGTCATGGAGCAAACTCGTGCTAATGAGCTGAAGATTTGGGAGCTTGGTCTGGCAATGAAGAAGTTGTCGTTGAAAGAGGAACAAGTGGCTCTAGGTCATGATTCAAATCATCTGGAGAGATCAAAAATAGCTATGGGCAGATCAAAGGCATCCTTCAAAGCTGAAAAATTTAAGACTCAATTAGAAGACACAAGACACTCTGAGCTCCTTAGGACGTGCATTGACTGTCTAGTTGCTGGATTATTGGTCATGGCTGCAGCGCTGTCTTATGGTACTTACATATATTCATACAGAAGAATTACGGAAGCCACTGCATCATGTACACCTTCAAAGGCAAGTACTTTTTTTCCTTTCTGTTCTTGCATAAGCTTCACTAAATTGTTGGTGCTGTAG

Protein Analysis

405

Amino Acids

44.56

Weight (kDa)

8.71

Isoelectric Point (pI)

44.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 316
AccII CGCG 6 cut(s) 134, 194, 196, 198, 244, 553
AclWI GGATC 1 cut(s) 400
AcoI YGGCCR 1 cut(s) 739
AcsI RAATTY 1 cut(s) 992
AcuI CTGAAG 4 cut(s) 363, 519, 639, 875
AfaI GTAC 4 cut(s) 616, 1099, 1147, 1165
AfeI AGCGCT 1 cut(s) 1086
AfiI CCNNNNNNNGG 1 cut(s) 316
AflII CTTAAG 1 cut(s) 466
AflIII ACRYGT 1 cut(s) 417
AgsI TTSAA 7 cut(s) 23, 115, 446, 898, 930, 982, 1155
AjiI CACGTC 1 cut(s) 1041
AjnI CCWGG 1 cut(s) 720
AjuI GAANNNNNNNTTGG 2 cut(s) 438, 470
Alw21I GWGCWC 2 cut(s) 464, 1032
AlwI GGATC 1 cut(s) 400
AlwNI CAGNNNCTG 1 cut(s) 316
Ama87I CYCGRG 1 cut(s) 769
Aor51HI AGCGCT 1 cut(s) 1086
AoxI GGCC 1 cut(s) 739
ApeKI GCWGC 2 cut(s) 1079, 1082
ApoI RAATTY 1 cut(s) 992
Asp700I GAANNNNTTC 1 cut(s) 607
AspLEI GCGC 7 cut(s) 125, 196, 198, 213, 220, 244, 1087
AspS9I GGNCC 1 cut(s) 4
AsuHPI GGTGA 1 cut(s) 341
AvaI CYCGRG 1 cut(s) 769
AvaII GGWCC 1 cut(s) 4
AxyI CCTNAGG 1 cut(s) 1034
BalI TGGCCA 1 cut(s) 741
BanII GRGCYC 2 cut(s) 254, 1032
BauI CACGAG 1 cut(s) 840
BbsI GAAGAC 2 cut(s) 342, 1017
Bbv12I GWGCWC 2 cut(s) 464, 1032
BbvI GCAGC 2 cut(s) 1066, 1094
BccI CCATC 1 cut(s) 39
BceAI ACGGC 2 cut(s) 59, 136
BciT130I CCWGG 1 cut(s) 722
BclI TGATCA 1 cut(s) 355
BfaI CTAG 3 cut(s) 335, 917, 1055
BfmI CTRYAG 2 cut(s) 1080, 1214
BfoI RGCGCY 3 cut(s) 126, 214, 1088
BfrI CTTAAG 1 cut(s) 466
BisI GCNGC 7 cut(s) 42, 45, 192, 240, 245, 1080, 1083
BlsI GCNGC 7 cut(s) 43, 46, 193, 241, 246, 1081, 1084
BmcAI AGTACT 2 cut(s) 616, 1165
Bme1390I CCNGG 1 cut(s) 722
Bme18I GGWCC 1 cut(s) 4
BmeT110I CYCGRG 1 cut(s) 769
BmgBI CACGTC 1 cut(s) 1041
BmgT120I GGNCC 1 cut(s) 4
BmiI GGNNCC 3 cut(s) 6, 190, 251
BmrFI CCNGG 1 cut(s) 722
BmsI GCATC 3 cut(s) 700, 983, 1148
BpiI GAAGAC 2 cut(s) 342, 1017
BpmI CTGGAG 3 cut(s) 505, 743, 959
BsaBI GATNNNNATC 1 cut(s) 930
Bsc4I CCNNNNNNNGG 1 cut(s) 316
Bse1I ACTGG 1 cut(s) 612
Bse21I CCTNAGG 1 cut(s) 1034
Bse3DI GCAATG 1 cut(s) 885
Bse8I GATNNNNATC 1 cut(s) 930
BseBI CCWGG 1 cut(s) 722
BseGI GGATG 3 cut(s) 291, 351, 974
BseJI GATNNNNATC 1 cut(s) 930
BseLI CCNNNNNNNGG 1 cut(s) 316
BseMI GCAATG 1 cut(s) 885
BseMII CTCAG 2 cut(s) 651, 1017
BseNI ACTGG 1 cut(s) 612
BsePI GCGCGC 1 cut(s) 194
BseRI GAGGAG 5 cut(s) 130, 133, 136, 139, 201
BseXI GCAGC 2 cut(s) 1066, 1094
Bsh1236I CGCG 6 cut(s) 134, 194, 196, 198, 244, 553
Bsh1285I CGRYCG 1 cut(s) 132
BshFI GGCC 1 cut(s) 741
BsiEI CGRYCG 1 cut(s) 132
BsiHKAI GWGCWC 2 cut(s) 464, 1032
BsiHKCI CYCGRG 1 cut(s) 769
BslI CCNNNNNNNGG 1 cut(s) 316
BsnI GGCC 1 cut(s) 741
BsoBI CYCGRG 1 cut(s) 769
Bsp1286I GDGCHC 3 cut(s) 254, 464, 1032
Bsp1407I TGTACA 1 cut(s) 1145
Bsp143I GATC 7 cut(s) 79, 355, 392, 483, 682, 944, 965
BspANI GGCC 1 cut(s) 741
BspCNI CTCAG 2 cut(s) 652, 1018
BspFNI CGCG 6 cut(s) 134, 194, 196, 198, 244, 553
BspHI TCATGA 2 cut(s) 562, 922
BspLI GGNNCC 3 cut(s) 6, 190, 251
BspMAI CTGCAG 1 cut(s) 1084
BspPI GGATC 1 cut(s) 400
BspTI CTTAAG 1 cut(s) 466
BsrDI GCAATG 1 cut(s) 885
BsrGI TGTACA 1 cut(s) 1145
BsrI ACTGG 1 cut(s) 612
BssHII GCGCGC 1 cut(s) 194
BssMI GATC 7 cut(s) 79, 355, 392, 483, 682, 944, 965
BssSI CACGAG 1 cut(s) 840
Bst2BI CACGAG 1 cut(s) 840
Bst2UI CCWGG 1 cut(s) 722
Bst4CI ACNGT 4 cut(s) 205, 581, 778, 1052
Bst6I CTCTTC 2 cut(s) 24, 157
BstAFI CTTAAG 1 cut(s) 466
BstAUI TGTACA 1 cut(s) 1145
BstC8I GCNNGC 2 cut(s) 196, 527
BstDEI CTNAG 5 cut(s) 366, 584, 660, 1026, 1034
BstF5I GGATG 3 cut(s) 291, 351, 974
BstFNI CGCG 6 cut(s) 134, 194, 196, 198, 244, 553
BstH2I RGCGCY 3 cut(s) 126, 214, 1088
BstHHI GCGC 7 cut(s) 125, 196, 198, 213, 220, 244, 1087
BstKTI GATC 7 cut(s) 82, 358, 395, 486, 685, 947, 968
BstMBI GATC 7 cut(s) 79, 355, 392, 483, 682, 944, 965
BstMCI CGRYCG 1 cut(s) 132
BstMWI GCNNNNNNNGC 2 cut(s) 131, 217
BstNI CCWGG 1 cut(s) 722
BstSCI CCNGG 1 cut(s) 720
BstSFI CTRYAG 2 cut(s) 1080, 1214
BstUI CGCG 6 cut(s) 134, 194, 196, 198, 244, 553
BstV1I GCAGC 2 cut(s) 1066, 1094
BstV2I GAAGAC 2 cut(s) 342, 1017
Bsu36I CCTNAGG 1 cut(s) 1034
BsuRI GGCC 1 cut(s) 741
BtrI CACGTC 1 cut(s) 1041
BtsCI GGATG 3 cut(s) 291, 351, 974
BtsI GCAGTG 1 cut(s) 1134
BtsIMutI CAGTG 2 cut(s) 297, 1134
Cac8I GCNNGC 2 cut(s) 196, 527
CaiI CAGNNNCTG 1 cut(s) 316
CciI TCATGA 2 cut(s) 562, 922
CfoI GCGC 7 cut(s) 125, 196, 198, 213, 220, 244, 1087
Cfr13I GGNCC 1 cut(s) 4
CseI GACGC 1 cut(s) 123
Csp6I GTAC 4 cut(s) 615, 1098, 1146, 1164
CviAII CATG 9 cut(s) 56, 563, 737, 787, 802, 829, 923, 1075, 1143
CviQI GTAC 4 cut(s) 615, 1098, 1146, 1164
DdeI CTNAG 5 cut(s) 366, 584, 660, 1026, 1034
DpnI GATC 7 cut(s) 81, 357, 394, 485, 684, 946, 967
DpnII GATC 7 cut(s) 79, 355, 392, 483, 682, 944, 965
EaeI YGGCCR 1 cut(s) 739
Eam1104I CTCTTC 2 cut(s) 24, 157
EarI CTCTTC 2 cut(s) 24, 157
EciI GGCGGA 2 cut(s) 28, 262
Ecl136II GAGCTC 1 cut(s) 1030
Eco24I GRGCYC 2 cut(s) 254, 1032
Eco32I GATATC 1 cut(s) 515
Eco47I GGWCC 1 cut(s) 4
Eco47III AGCGCT 1 cut(s) 1086
Eco53kI GAGCTC 1 cut(s) 1030
Eco57I CTGAAG 4 cut(s) 363, 519, 639, 875
Eco81I CCTNAGG 1 cut(s) 1034
Eco88I CYCGRG 1 cut(s) 769
EcoICRI GAGCTC 1 cut(s) 1030
EcoRII CCWGG 1 cut(s) 720
EcoRV GATATC 1 cut(s) 515
EcoT38I GRGCYC 2 cut(s) 254, 1032
FaeI CATG 9 cut(s) 59, 566, 740, 790, 805, 832, 926, 1078, 1146
FalI AAGNNNNNCTT 2 cut(s) 962, 994
FatI CATG 9 cut(s) 55, 562, 736, 786, 801, 828, 922, 1074, 1142
FauI CCCGC 1 cut(s) 79
FbaI TGATCA 1 cut(s) 355
Fnu4HI GCNGC 7 cut(s) 42, 45, 192, 240, 245, 1080, 1083
FokI GGATG 3 cut(s) 298, 358, 961
FriOI GRGCYC 2 cut(s) 254, 1032
Fsp4HI GCNGC 7 cut(s) 42, 45, 192, 240, 245, 1080, 1083
FspBI CTAG 3 cut(s) 335, 917, 1055
GlaI GCGC 7 cut(s) 124, 195, 197, 212, 219, 243, 1086
GluI GCNGC 7 cut(s) 42, 45, 192, 240, 245, 1080, 1083
GsuI CTGGAG 3 cut(s) 505, 743, 959
HaeII RGCGCY 3 cut(s) 126, 214, 1088
HaeIII GGCC 1 cut(s) 741
HgaI GACGC 1 cut(s) 123
HhaI GCGC 7 cut(s) 125, 196, 198, 213, 220, 244, 1087
Hin1II CATG 9 cut(s) 59, 566, 740, 790, 805, 832, 926, 1078, 1146
Hin6I GCGC 7 cut(s) 123, 194, 196, 211, 218, 242, 1085
HinP1I GCGC 7 cut(s) 123, 194, 196, 211, 218, 242, 1085
HincII GTYRAC 2 cut(s) 718, 781
HindII GTYRAC 2 cut(s) 718, 781
HindIII AAGCTT 2 cut(s) 594, 1192
HinfI GANTC 4 cut(s) 313, 491, 926, 1000
HpaI GTTAAC 1 cut(s) 718
HphI GGTGA 1 cut(s) 341
Hpy166II GTNNAC 4 cut(s) 307, 718, 781, 1148
Hpy188I TCNGA 6 cut(s) 262, 355, 389, 499, 696, 1027
Hpy188III TCNNGA 6 cut(s) 317, 412, 436, 563, 923, 938
Hpy8I GTNNAC 4 cut(s) 307, 718, 781, 1148
Hpy99I CGWCG 1 cut(s) 80
HpyAV CCTTC 5 cut(s) 21, 88, 217, 988, 1161
HpyCH4III ACNGT 4 cut(s) 205, 581, 778, 1052
HpyCH4IV ACGT 2 cut(s) 419, 1040
HpyCH4V TGCA 7 cut(s) 656, 691, 736, 1044, 1082, 1139, 1188
HpyF10VI GCNNNNNNNGC 2 cut(s) 131, 217
HpyF3I CTNAG 5 cut(s) 366, 584, 660, 1026, 1034
HpySE526I ACGT 2 cut(s) 419, 1040
Hsp92II CATG 9 cut(s) 59, 566, 740, 790, 805, 832, 926, 1078, 1146
HspAI GCGC 7 cut(s) 123, 194, 196, 211, 218, 242, 1085
Ksp22I TGATCA 1 cut(s) 355
KspAI GTTAAC 1 cut(s) 718
Kzo9I GATC 7 cut(s) 79, 355, 392, 483, 682, 944, 965
LmnI GCTCC 6 cut(s) 188, 249, 459, 832, 865, 1035
Lsp1109I GCAGC 2 cut(s) 1066, 1094
LweI GCATC 3 cut(s) 700, 983, 1148
MaeI CTAG 3 cut(s) 335, 917, 1055
MaeII ACGT 2 cut(s) 419, 1040
MaeIII GTNAC 2 cut(s) 199, 556
MalI GATC 7 cut(s) 81, 357, 394, 485, 684, 946, 967
MauBI CGCGCGCG 1 cut(s) 194
MboI GATC 7 cut(s) 79, 355, 392, 483, 682, 944, 965
MfeI CAATTG 2 cut(s) 686, 752
MhlI GDGCHC 3 cut(s) 254, 464, 1032
MlsI TGGCCA 1 cut(s) 741
MluCI AATT 9 cut(s) 256, 673, 686, 752, 797, 992, 1004, 1122, 1202
MluNI TGGCCA 1 cut(s) 741
MlyI GAGTC 1 cut(s) 994
Mox20I TGGCCA 1 cut(s) 741
MroXI GAANNNNTTC 1 cut(s) 607
MscI TGGCCA 1 cut(s) 741
MseI TTAA 4 cut(s) 467, 671, 717, 996
Msp20I TGGCCA 1 cut(s) 741
MspA1I CMGCKG 1 cut(s) 383
MspCI CTTAAG 1 cut(s) 466
MspR9I CCNGG 1 cut(s) 722
MunI CAATTG 2 cut(s) 686, 752
MvaI CCWGG 1 cut(s) 722
MvnI CGCG 6 cut(s) 134, 194, 196, 198, 244, 553
MwoI GCNNNNNNNGC 2 cut(s) 131, 217
NdeII GATC 7 cut(s) 79, 355, 392, 483, 682, 944, 965
NlaIII CATG 9 cut(s) 59, 566, 740, 790, 805, 832, 926, 1078, 1146
NlaIV GGNNCC 3 cut(s) 6, 190, 251
NmeAIII GCCGAG 1 cut(s) 239
NmuCI GTSAC 2 cut(s) 199, 556
PagI TCATGA 2 cut(s) 562, 922
PauI GCGCGC 1 cut(s) 194
PdmI GAANNNNTTC 1 cut(s) 607
PfeI GAWTC 3 cut(s) 313, 491, 926
PflMI CCANNNNNTGG 1 cut(s) 316
PkrI GCNGC 7 cut(s) 43, 46, 193, 241, 246, 1081, 1084
PleI GAGTC 1 cut(s) 994
PpsI GAGTC 1 cut(s) 994
Psp124BI GAGCTC 1 cut(s) 1032
Psp6I CCWGG 1 cut(s) 720
PspGI CCWGG 1 cut(s) 720
PspN4I GGNNCC 3 cut(s) 6, 190, 251
PspPI GGNCC 1 cut(s) 4
PsrI GAACNNNNNNTAC 2 cut(s) 592, 624
PstI CTGCAG 1 cut(s) 1084
PstNI CAGNNNCTG 1 cut(s) 316
PteI GCGCGC 1 cut(s) 194
PvuII CAGCTG 1 cut(s) 383
RsaI GTAC 4 cut(s) 616, 1099, 1147, 1165
RsaNI GTAC 4 cut(s) 615, 1098, 1146, 1164
SacI GAGCTC 1 cut(s) 1032
SaqAI TTAA 4 cut(s) 467, 671, 717, 996
SatI GCNGC 7 cut(s) 42, 45, 192, 240, 245, 1080, 1083
Sau3AI GATC 7 cut(s) 79, 355, 392, 483, 682, 944, 965
Sau96I GGNCC 1 cut(s) 4
ScaI AGTACT 2 cut(s) 616, 1165
SchI GAGTC 1 cut(s) 994
ScrFI CCNGG 1 cut(s) 722
SduI GDGCHC 3 cut(s) 254, 464, 1032
SfaNI GCATC 3 cut(s) 700, 983, 1148
SfcI CTRYAG 2 cut(s) 1080, 1214
SinI GGWCC 1 cut(s) 4
SmlI CTYRAG 1 cut(s) 466
SmoI CTYRAG 1 cut(s) 466
Sse9I AATT 9 cut(s) 256, 673, 686, 752, 797, 992, 1004, 1122, 1202
SspMI CTAG 3 cut(s) 335, 917, 1055
SstI GAGCTC 1 cut(s) 1032
StyD4I CCNGG 1 cut(s) 720
TaaI ACNGT 4 cut(s) 205, 581, 778, 1052
TaiI ACGT 2 cut(s) 422, 1043
TaqI TCGA 3 cut(s) 78, 482, 667
TaqII GACCGA 1 cut(s) 118
TasI AATT 9 cut(s) 256, 673, 686, 752, 797, 992, 1004, 1122, 1202
TatI WGTACW 3 cut(s) 614, 1145, 1163
TauI GCSGC 5 cut(s) 44, 47, 194, 242, 247
TfiI GAWTC 3 cut(s) 313, 491, 926
Tru1I TTAA 4 cut(s) 467, 671, 717, 996
Tru9I TTAA 4 cut(s) 467, 671, 717, 996
TscAI CASTG 2 cut(s) 297, 1141
TseFI GTSAC 2 cut(s) 199, 556
TseI GCWGC 2 cut(s) 1079, 1082
Tsp45I GTSAC 2 cut(s) 199, 556
TspDTI ATGAA 5 cut(s) 72, 582, 790, 896, 1101
TspGWI ACGGA 1 cut(s) 1142
TspRI CASTG 2 cut(s) 297, 1141
Van91I CCANNNNNTGG 1 cut(s) 316
Vha464I CTTAAG 1 cut(s) 466
VpaK11BI GGWCC 1 cut(s) 4
XapI RAATTY 1 cut(s) 992
XmnI GAANNNNTTC 1 cut(s) 607
XspI CTAG 3 cut(s) 335, 917, 1055
ZrmI AGTACT 2 cut(s) 616, 1165
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.