FvH4_1g22140

CPR-5-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Forward (+)
14085584 .. 14091130
5547 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g22140.t5

Sequence Viewer

Length: 1263 bp
ATGTTCAGATTCCTTCCCCACTCTCCCTCCTCGTATTTAAACTCTCTGTTGAATGCTGTTCCCTTCCCAAGTTCCCACCTTTCTATGGACCCACCTCCTCCCGCTCCTCCTCCTCAACCCCAAATCTCCGCCGTCCAATCCACCACCCCCCGCCATGAAAACCCAATCGCCGCCGTCGAAAACCCCAAGAAAAAGGGCAAGAAGAAGCTCTTCAAGGACAGCGCTTCGGTTTCGTCCTCCTCCTCCTCTGCTTCGACTTCAACTTCCGGGTTCTCCGTCAGAGGAGCCATGCGCGTGGCGTGCAAGCGCCGAGGGCCGAAGGTGGTTGTCAATGCGGCGCGGCGGAACCCTAGTTCCGATGATATAGGGCATCTGGTGGGGATGTCAATTGGCCTGGTTGTTACTCAGATTCTGGAAAGTATTGGTGAGCGAGGTGGAGGGATGTCTTCTGATCATCTTGTCAAGATGTGTGCTTCAGCTCTCAGAGAATCTTTAGCGAATGATTTTGGGAACACGTTTGATTGTTTTATCGATAAATTTGAACAATCATTTGGAAGCACCTTAAGAACTCGTAAGTCAATCAAAGAATCATCCGAAGATAACACAAGATATATCTCCAGCAAGCAAAACATGGAAGAATATAGTCCACATGTCACTCATGATGAACAAGATGACTGTCTAAGAAGGGAAGCTTGTAGAAGCAGTTCCAGTACAGAAGATTCTCACTCAAAAGAAGTGAACCACAGTACAGCAACTGAGGTTCGATTCAATTATAGAGATCAATTGCTTCATAATATGCTGACAAACCCTGTAAATCTGGAGGTTGCCCTGCATGGCCAAACCAATCAATTGGCGTGTATTGCCCCGAGAACTGTTGAGTCTGTGACTAACCGATTCATGGTTAACATGGAGCGTGCTAATGAGCTGAAGGAATTGGAGCTTCGTCTGAAATTGGAGAAGTTGGAGGTAAATAAGGAACAGGTAGCTCTCGGTTATGATTCAAATCATCTGGAGAGATCAAAAATAGCTATGGGTAGATCAAAGGCATCCTTCAAAGCTGAAAAATTCAAGACTCAATTAGAAGACACTAGACACTCTGAGCTCCTTAGAAAGTGCATCGACTGTCTAGTTGCTGGAATATTTGTCATGGCTGCAGCCCTGTTCTATGGTACTTATGTGTATTCATACAGAAGAATAAGGGAAGCCACTACATCCTGTACACCTTCACAGGCAAGTACTGTTTTCCTTTCTGTTCTTGCATAA

Protein Analysis

421

Amino Acids

46.58

Weight (kDa)

8.95

Isoelectric Point (pI)

54.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 104
AccII CGCG 2 cut(s) 294, 340
AciI CCGC 7 cut(s) 102, 129, 151, 171, 335, 340, 343
AcoI YGGCCR 1 cut(s) 835
AcsI RAATTY 2 cut(s) 536, 1064
AcuI CTGAAG 2 cut(s) 459, 947
AfaI GTAC 5 cut(s) 712, 748, 1171, 1219, 1237
AfeI AGCGCT 1 cut(s) 223
AfiI CCNNNNNNNGG 2 cut(s) 85, 898
AflII CTTAAG 1 cut(s) 562
AflIII ACRYGT 2 cut(s) 513, 649
AgsI TTSAA 8 cut(s) 52, 214, 261, 542, 769, 1002, 1054, 1069
AjnI CCWGG 1 cut(s) 393
AjuI GAANNNNNNNTTGG 2 cut(s) 534, 566
AloI GAACNNNNNNTCC 4 cut(s) 337, 338, 369, 370
AluBI AGCT 9 cut(s) 208, 479, 692, 925, 940, 986, 1028, 1058, 1102
AluI AGCT 9 cut(s) 208, 479, 692, 925, 940, 986, 1028, 1058, 1102
Alw21I GWGCWC 1 cut(s) 1104
AlwNI CAGNNNCTG 2 cut(s) 412, 755
Ama87I CYCGRG 1 cut(s) 865
Aor51HI AGCGCT 1 cut(s) 223
AoxI GGCC 3 cut(s) 314, 391, 835
ApeKI GCWGC 2 cut(s) 1151, 1154
ApoI RAATTY 2 cut(s) 536, 1064
Asp700I GAANNNNTTC 2 cut(s) 209, 703
AspLEI GCGC 4 cut(s) 224, 294, 309, 340
AspS9I GGNCC 2 cut(s) 88, 314
AsuC2I CCSGG 1 cut(s) 268
AsuHPI GGTGA 1 cut(s) 437
AvaI CYCGRG 1 cut(s) 865
AvaII GGWCC 1 cut(s) 88
BaeI ACNNNNGTAYC 2 cut(s) 1161, 1194
BalI TGGCCA 1 cut(s) 837
BanII GRGCYC 1 cut(s) 1104
BbsI GAAGAC 2 cut(s) 438, 1089
Bbv12I GWGCWC 1 cut(s) 1104
BbvI GCAGC 2 cut(s) 1138, 1166
BceAI ACGGC 2 cut(s) 116, 158
BciT130I CCWGG 1 cut(s) 395
BclI TGATCA 1 cut(s) 451
BcnI CCSGG 1 cut(s) 268
BfaI CTAG 3 cut(s) 351, 1089, 1127
BfmI CTRYAG 1 cut(s) 1152
BfoI RGCGCY 2 cut(s) 225, 310
BfrI CTTAAG 1 cut(s) 562
BisI GCNGC 5 cut(s) 171, 336, 341, 1152, 1155
BlsI GCNGC 5 cut(s) 172, 337, 342, 1153, 1156
BmcAI AGTACT 1 cut(s) 1237
Bme1390I CCNGG 2 cut(s) 268, 395
Bme18I GGWCC 1 cut(s) 88
BmeT110I CYCGRG 1 cut(s) 865
BmgT120I GGNCC 2 cut(s) 88, 314
BmiI GGNNCC 3 cut(s) 90, 286, 347
BmrFI CCNGG 2 cut(s) 268, 395
BmsI GCATC 3 cut(s) 379, 1055, 1125
BpiI GAAGAC 2 cut(s) 438, 1089
BpmI CTGGAG 3 cut(s) 601, 839, 1031
BpuMI CCSGG 1 cut(s) 268
Bsa29I ATCGAT 1 cut(s) 531
BsaBI GATNNNNATC 1 cut(s) 1002
BsaJI CCNNGG 1 cut(s) 310
BsaXI ACNNNNNCTCC 2 cut(s) 11, 41
Bsc4I CCNNNNNNNGG 2 cut(s) 85, 898
Bse1I ACTGG 1 cut(s) 708
Bse8I GATNNNNATC 1 cut(s) 1002
BseBI CCWGG 1 cut(s) 395
BseCI ATCGAT 1 cut(s) 531
BseDI CCNNGG 1 cut(s) 310
BseGI GGATG 5 cut(s) 387, 447, 590, 1046, 1211
BseJI GATNNNNATC 1 cut(s) 1002
BseLI CCNNNNNNNGG 2 cut(s) 85, 898
BseMII CTCAG 4 cut(s) 419, 496, 747, 1089
BseNI ACTGG 1 cut(s) 708
BseRI GAGGAG 9 cut(s) 19, 87, 96, 99, 102, 229, 232, 235, 297
BseXI GCAGC 2 cut(s) 1138, 1166
Bsh1236I CGCG 2 cut(s) 294, 340
BshFI GGCC 3 cut(s) 316, 393, 837
BshVI ATCGAT 1 cut(s) 531
BsiHKAI GWGCWC 1 cut(s) 1104
BsiHKCI CYCGRG 1 cut(s) 865
BsiSI CCGG 1 cut(s) 267
BslI CCNNNNNNNGG 2 cut(s) 85, 898
BsmI GAATGC 1 cut(s) 58
BsnI GGCC 3 cut(s) 316, 393, 837
BsoBI CYCGRG 1 cut(s) 865
Bsp1286I GDGCHC 1 cut(s) 1104
Bsp1407I TGTACA 1 cut(s) 1217
Bsp143I GATC 4 cut(s) 451, 778, 1016, 1037
BspACI CCGC 7 cut(s) 102, 129, 151, 171, 335, 340, 343
BspANI GGCC 3 cut(s) 316, 393, 837
BspCNI CTCAG 4 cut(s) 418, 495, 748, 1090
BspDI ATCGAT 1 cut(s) 531
BspFNI CGCG 2 cut(s) 294, 340
BspHI TCATGA 1 cut(s) 658
BspLI GGNNCC 3 cut(s) 90, 286, 347
BspMAI CTGCAG 1 cut(s) 1156
BspQI GCTCTTC 1 cut(s) 215
BspTI CTTAAG 1 cut(s) 562
BsrBI CCGCTC 1 cut(s) 104
BsrGI TGTACA 1 cut(s) 1217
BsrI ACTGG 1 cut(s) 708
BssECI CCNNGG 1 cut(s) 310
BssMI GATC 4 cut(s) 451, 778, 1016, 1037
Bst2UI CCWGG 1 cut(s) 395
Bst4CI ACNGT 5 cut(s) 677, 746, 874, 1124, 1240
Bst6I CTCTTC 1 cut(s) 215
BstAFI CTTAAG 1 cut(s) 562
BstAUI TGTACA 1 cut(s) 1217
BstC8I GCNNGC 4 cut(s) 301, 305, 623, 915
BstDEI CTNAG 6 cut(s) 405, 482, 680, 756, 1098, 1106
BstF5I GGATG 5 cut(s) 387, 447, 590, 1046, 1211
BstFNI CGCG 2 cut(s) 294, 340
BstH2I RGCGCY 2 cut(s) 225, 310
BstHHI GCGC 4 cut(s) 224, 294, 309, 340
BstKTI GATC 4 cut(s) 454, 781, 1019, 1040
BstMBI GATC 4 cut(s) 451, 778, 1016, 1037
BstMWI GCNNNNNNNGC 3 cut(s) 300, 313, 860
BstNI CCWGG 1 cut(s) 395
BstNSI RCATGY 1 cut(s) 653
BstSCI CCNGG 2 cut(s) 266, 393
BstSFI CTRYAG 1 cut(s) 1152
BstUI CGCG 2 cut(s) 294, 340
BstV1I GCAGC 2 cut(s) 1138, 1166
BstV2I GAAGAC 2 cut(s) 438, 1089
BstXI CCANNNNNNTGG 2 cut(s) 295, 850
Bsu15I ATCGAT 1 cut(s) 531
BsuRI GGCC 3 cut(s) 316, 393, 837
BsuTUI ATCGAT 1 cut(s) 531
BtsCI GGATG 5 cut(s) 387, 447, 590, 1046, 1211
Cac8I GCNNGC 4 cut(s) 301, 305, 623, 915
CaiI CAGNNNCTG 2 cut(s) 412, 755
CciI TCATGA 1 cut(s) 658
CfoI GCGC 4 cut(s) 224, 294, 309, 340
Cfr13I GGNCC 2 cut(s) 88, 314
ClaI ATCGAT 1 cut(s) 531
Csp6I GTAC 5 cut(s) 711, 747, 1170, 1218, 1236
CviAII CATG 9 cut(s) 155, 289, 631, 650, 659, 833, 898, 907, 1147
CviQI GTAC 5 cut(s) 711, 747, 1170, 1218, 1236
DdeI CTNAG 6 cut(s) 405, 482, 680, 756, 1098, 1106
DpnI GATC 4 cut(s) 453, 780, 1018, 1039
DpnII GATC 4 cut(s) 451, 778, 1016, 1037
DraI TTTAAA 1 cut(s) 39
EaeI YGGCCR 1 cut(s) 835
Eam1104I CTCTTC 1 cut(s) 215
EarI CTCTTC 1 cut(s) 215
EciI GGCGGA 2 cut(s) 118, 358
Ecl136II GAGCTC 1 cut(s) 1102
Eco24I GRGCYC 1 cut(s) 1104
Eco47I GGWCC 1 cut(s) 88
Eco47III AGCGCT 1 cut(s) 223
Eco53kI GAGCTC 1 cut(s) 1102
Eco57I CTGAAG 2 cut(s) 459, 947
Eco88I CYCGRG 1 cut(s) 865
EcoICRI GAGCTC 1 cut(s) 1102
EcoRII CCWGG 1 cut(s) 393
EcoT38I GRGCYC 1 cut(s) 1104
FaeI CATG 9 cut(s) 158, 292, 634, 653, 662, 836, 901, 910, 1150
FalI AAGNNNNNCTT 6 cut(s) 194, 226, 676, 708, 1034, 1066
FatI CATG 9 cut(s) 154, 288, 630, 649, 658, 832, 897, 906, 1146
FauI CCCGC 2 cut(s) 109, 158
FbaI TGATCA 1 cut(s) 451
Fnu4HI GCNGC 5 cut(s) 171, 336, 341, 1152, 1155
FokI GGATG 5 cut(s) 394, 454, 577, 1033, 1198
FriOI GRGCYC 1 cut(s) 1104
Fsp4HI GCNGC 5 cut(s) 171, 336, 341, 1152, 1155
FspBI CTAG 3 cut(s) 351, 1089, 1127
GlaI GCGC 4 cut(s) 223, 293, 308, 339
GluI GCNGC 5 cut(s) 171, 336, 341, 1152, 1155
GsuI CTGGAG 3 cut(s) 601, 839, 1031
HaeII RGCGCY 2 cut(s) 225, 310
HaeIII GGCC 3 cut(s) 316, 393, 837
HapII CCGG 1 cut(s) 267
HhaI GCGC 4 cut(s) 224, 294, 309, 340
Hin1II CATG 9 cut(s) 158, 292, 634, 653, 662, 836, 901, 910, 1150
Hin6I GCGC 4 cut(s) 222, 292, 307, 338
HinP1I GCGC 4 cut(s) 222, 292, 307, 338
HincII GTYRAC 1 cut(s) 904
HindII GTYRAC 1 cut(s) 904
HindIII AAGCTT 1 cut(s) 690
HpaI GTTAAC 1 cut(s) 904
HpaII CCGG 1 cut(s) 267
HphI GGTGA 1 cut(s) 437
Hpy166II GTNNAC 4 cut(s) 647, 739, 904, 1220
Hpy188I TCNGA 9 cut(s) 8, 281, 358, 408, 451, 485, 595, 948, 1099
Hpy188III TCNNGA 6 cut(s) 413, 463, 659, 818, 1010, 1069
Hpy8I GTNNAC 4 cut(s) 647, 739, 904, 1220
Hpy99I CGWCG 1 cut(s) 179
HpyAV CCTTC 7 cut(s) 23, 73, 313, 678, 922, 1060, 1233
HpyCH4III ACNGT 5 cut(s) 677, 746, 874, 1124, 1240
HpyCH4IV ACGT 1 cut(s) 515
HpyCH4V TGCA 5 cut(s) 303, 832, 1116, 1154, 1259
HpyF10VI GCNNNNNNNGC 3 cut(s) 300, 313, 860
HpyF3I CTNAG 6 cut(s) 405, 482, 680, 756, 1098, 1106
HpySE526I ACGT 1 cut(s) 515
Hsp92II CATG 9 cut(s) 158, 292, 634, 653, 662, 836, 901, 910, 1150
HspAI GCGC 4 cut(s) 222, 292, 307, 338
Ksp22I TGATCA 1 cut(s) 451
KspAI GTTAAC 1 cut(s) 904
Kzo9I GATC 4 cut(s) 451, 778, 1016, 1037
LguI GCTCTTC 1 cut(s) 215
LmnI GCTCC 5 cut(s) 109, 284, 910, 937, 1107
Lsp1109I GCAGC 2 cut(s) 1138, 1166
LweI GCATC 3 cut(s) 379, 1055, 1125
MaeI CTAG 3 cut(s) 351, 1089, 1127
MaeII ACGT 1 cut(s) 515
MaeIII GTNAC 3 cut(s) 400, 652, 883
MalI GATC 4 cut(s) 453, 780, 1018, 1039
MbiI CCGCTC 1 cut(s) 104
MboI GATC 4 cut(s) 451, 778, 1016, 1037
MboII GAAGA 8 cut(s) 202, 214, 438, 608, 647, 728, 1094, 1203
MfeI CAATTG 3 cut(s) 387, 782, 848
MhlI GDGCHC 1 cut(s) 1104
MlsI TGGCCA 1 cut(s) 837
MluCI AATT 9 cut(s) 387, 536, 769, 782, 848, 932, 950, 1064, 1076
MluNI TGGCCA 1 cut(s) 837
MlyI GAGTC 2 cut(s) 887, 1066
MmeI TCCRAC 1 cut(s) 942
Mox20I TGGCCA 1 cut(s) 837
MroXI GAANNNNTTC 2 cut(s) 209, 703
MscI TGGCCA 1 cut(s) 837
MseI TTAA 3 cut(s) 38, 563, 903
MslI CAYNNNNRTG 1 cut(s) 293
Msp20I TGGCCA 1 cut(s) 837
MspCI CTTAAG 1 cut(s) 562
MspI CCGG 1 cut(s) 267
MspR9I CCNGG 2 cut(s) 268, 395
MunI CAATTG 3 cut(s) 387, 782, 848
Mva1269I GAATGC 1 cut(s) 58
MvaI CCWGG 1 cut(s) 395
MvnI CGCG 2 cut(s) 294, 340
MwoI GCNNNNNNNGC 3 cut(s) 300, 313, 860
NciI CCSGG 1 cut(s) 268
NdeII GATC 4 cut(s) 451, 778, 1016, 1037
NlaIII CATG 9 cut(s) 158, 292, 634, 653, 662, 836, 901, 910, 1150
NlaIV GGNNCC 3 cut(s) 90, 286, 347
NmeAIII GCCGAG 1 cut(s) 335
NmuCI GTSAC 2 cut(s) 652, 883
NspI RCATGY 1 cut(s) 653
PagI TCATGA 1 cut(s) 658
PciI ACATGT 1 cut(s) 649
PciSI GCTCTTC 1 cut(s) 215
PcsI WCGNNNNNNNCGW 1 cut(s) 174
PctI GAATGC 1 cut(s) 58
PdmI GAANNNNTTC 2 cut(s) 209, 703
PfeI GAWTC 8 cut(s) 9, 409, 488, 587, 719, 765, 894, 998
PkrI GCNGC 5 cut(s) 172, 337, 342, 1153, 1156
PleI GAGTC 2 cut(s) 886, 1066
PpsI GAGTC 2 cut(s) 886, 1066
PscI ACATGT 1 cut(s) 649
Psp124BI GAGCTC 1 cut(s) 1104
Psp6I CCWGG 1 cut(s) 393
PspGI CCWGG 1 cut(s) 393
PspN4I GGNNCC 3 cut(s) 90, 286, 347
PspPI GGNCC 2 cut(s) 88, 314
PsrI GAACNNNNNNTAC 2 cut(s) 688, 720
PstI CTGCAG 1 cut(s) 1156
PstNI CAGNNNCTG 2 cut(s) 412, 755
RsaI GTAC 5 cut(s) 712, 748, 1171, 1219, 1237
RsaNI GTAC 5 cut(s) 711, 747, 1170, 1218, 1236
RseI CAYNNNNRTG 1 cut(s) 293
SacI GAGCTC 1 cut(s) 1104
SapI GCTCTTC 1 cut(s) 215
SaqAI TTAA 3 cut(s) 38, 563, 903
SatI GCNGC 5 cut(s) 171, 336, 341, 1152, 1155
Sau3AI GATC 4 cut(s) 451, 778, 1016, 1037
Sau96I GGNCC 2 cut(s) 88, 314
ScaI AGTACT 1 cut(s) 1237
SchI GAGTC 2 cut(s) 887, 1066
ScrFI CCNGG 2 cut(s) 268, 395
SduI GDGCHC 1 cut(s) 1104
SfaNI GCATC 3 cut(s) 379, 1055, 1125
SfcI CTRYAG 1 cut(s) 1152
SinI GGWCC 1 cut(s) 88
SmiMI CAYNNNNRTG 1 cut(s) 293
SmlI CTYRAG 1 cut(s) 562
SmoI CTYRAG 1 cut(s) 562
Sse9I AATT 9 cut(s) 387, 536, 769, 782, 848, 932, 950, 1064, 1076
SsiI CCGC 7 cut(s) 102, 129, 151, 171, 335, 340, 343
SspI AATATT 1 cut(s) 1140
SspMI CTAG 3 cut(s) 351, 1089, 1127
SstI GAGCTC 1 cut(s) 1104
StyD4I CCNGG 2 cut(s) 266, 393
TaaI ACNGT 5 cut(s) 677, 746, 874, 1124, 1240
TaiI ACGT 1 cut(s) 518
TaqI TCGA 5 cut(s) 177, 254, 531, 763, 1119
TasI AATT 9 cut(s) 387, 536, 769, 782, 848, 932, 950, 1064, 1076
TatI WGTACW 4 cut(s) 710, 746, 1217, 1235
TauI GCSGC 3 cut(s) 173, 338, 343
TfiI GAWTC 8 cut(s) 9, 409, 488, 587, 719, 765, 894, 998
Tru1I TTAA 3 cut(s) 38, 563, 903
Tru9I TTAA 3 cut(s) 38, 563, 903
TseFI GTSAC 2 cut(s) 652, 883
TseI GCWGC 2 cut(s) 1151, 1154
Tsp45I GTSAC 2 cut(s) 652, 883
TspDTI ATGAA 5 cut(s) 171, 678, 779, 886, 1173
TspGWI ACGGA 1 cut(s) 265
Vha464I CTTAAG 1 cut(s) 562
VpaK11BI GGWCC 1 cut(s) 88
XapI RAATTY 2 cut(s) 536, 1064
XceI RCATGY 1 cut(s) 653
XmnI GAANNNNTTC 2 cut(s) 209, 703
XspI CTAG 3 cut(s) 351, 1089, 1127
ZrmI AGTACT 1 cut(s) 1237
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.