AT5G65550

UDP-Glycosyltransferase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
26198304 .. 26199986
1683 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G65550.1

Sequence Viewer

Length: 1401 bp
ATGGCCGAGCCAAAACCGAAGCTTCATGTTGCAGTGTTCCCATGGTTAGCTTTAGGTCACATGATTCCTTACTTGCAACTCTCAAAGCTCATAGCAAGGAAAGGCCATACTGTGTCCTTCATCTCCACAGCTCGTAACATTTCACGTCTTCCCAATATATCCTCCGACCTTTCCGTGAATTTCGTTTCTTTGCCGTTAAGTCAAACCGTCGACCATCTCCCAGAGAACGCTGAGGCCACCACTGATGTCCCGGAGACTCACATAGCTTATCTGAAGAAAGCATTTGATGGGCTTTCTGAAGCTTTCACAGAGTTTTTAGAAGCTTCCAAACCAAACTGGATAGTGTATGATATCTTGCACCATTGGGTCCCGCCTATCGCTGAGAAGCTCGGCGTGAGACGAGCCATCTTCTGCACGTTCAACGCAGCTTCCATCATCATCATCGGTGGGCCAGCATCAGTCATGATTCAAGGTCATGACCCTCGAAAGACTGCTGAAGATCTTATCGTGCCTCCACCATGGGTCCCGTTTGAGACCAACATAGTTTACCGTCTCTTTGAAGCTAAGAGGATCATGGAGTATCCCACGGCAGGTGTAACTGGAGTTGAATTGAACGACAACTGTAGATTGGGTTTGGCTTACGTTGGCTCTGAGGTTATTGTGATTAGATCATGTATGGAACTCGAACCTGAGTGGATTCAATTGCTCAGTAAACTCCAAGGAAAGCCTGTGATTCCAATTGGTTTACTCCCGGCTACACCAATGGATGATGCAGATGACGAGGGAACATGGTTAGACATCAGAGAATGGCTAGACAGACATCAAGCAAAGTCTGTGGTTTATGTAGCCTTAGGAACTGAAGTGACAATTAGTAACGAAGAGATTCAAGGTTTAGCTCATGGGTTGGAGCTTTGCAGGTTACCTTTCTTTTGGACGCTAAGGAAGAGGACTAGAGCTTCTATGCTACTACCTGATGGGTTCAAAGAGAGAGTCAAAGAGCGTGGAGTCATTTGGACCGAGTGGGTACCTCAGACCAAGATACTGAGCCATGGTTCAGTTGGTGGGTTTGTTACTCATTGTGGTTGGGGATCAGCTGTGGAAGGGCTTAGCTTTGGTGTCCCTTTGATCATGTTTCCATGTAACCTAGACCAGCCGCTAGTGGCTAGGTTGCTCAGTGGGATGAATATAGGCTTGGAGATTCCAAGGAATGAGCGAGACGGGCTGTTCACGAGTGCTTCTGTTGCAGAGACAATCAGACATGTTGTTGTGGAAGAAGAAGGAAAGATCTACAGGAACAATGCTGCATCTCAGCAAAAGAAAATATTCGGGAACAAGAGATTGCAAGATCAGTATGCGGATGGTTTTATCGAGTTTCTGGAGAATCCTATAGCAGGAGTGTAG
Functional Annotation

Protein Analysis

466

Amino Acids

51.97

Weight (kDa)

5.85

Isoelectric Point (pI)

37.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 268 - 433 1.3e-16 UDP-glucoronosyl and UDP-glucosyl transferase
EryCIII-like_C PF06722 338 - 436 1.2e-06 Erythromycin biosynthesis protein CIII-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 581
Acc36I ACCTGC 2 cut(s) 581, 906
Acc65I GGTACC 1 cut(s) 1024
AccB1I GGYRCC 1 cut(s) 1024
AccI GTMKAC 1 cut(s) 210
AciI CCGC 3 cut(s) 371, 1154, 1355
AclWI GGATC 2 cut(s) 578, 1096
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 1 cut(s) 178
AcuI CTGAAG 4 cut(s) 293, 318, 516, 879
AfaI GTAC 1 cut(s) 1026
AfiI CCNNNNNNNGG 2 cut(s) 590, 1391
AflIII ACRYGT 1 cut(s) 1258
AgsI TTSAA 8 cut(s) 421, 470, 560, 608, 613, 701, 887, 982
AjiI CACGTC 1 cut(s) 146
AjuI GAANNNNNNNTTGG 2 cut(s) 1175, 1207
Alw26I GTCTC 6 cut(s) 248, 391, 527, 557, 1209, 1241
AlwI GGATC 2 cut(s) 578, 1096
AoxI GGCC 4 cut(s) 3, 103, 234, 449
ApeKI GCWGC 2 cut(s) 425, 1301
ApoI RAATTY 1 cut(s) 178
ArsI GACNNNNNNTTYG 2 cut(s) 975, 1007
Asp700I GAANNNNTTC 2 cut(s) 882, 1322
Asp718I GGTACC 1 cut(s) 1024
AspS9I GGNCC 4 cut(s) 367, 449, 523, 1014
AsuC2I CCSGG 2 cut(s) 251, 752
AvaII GGWCC 3 cut(s) 367, 523, 1014
AxyI CCTNAGG 1 cut(s) 850
BanI GGYRCC 1 cut(s) 1024
BauI CACGAG 1 cut(s) 1228
BbsI GAAGAC 1 cut(s) 140
BbvCI CCTCAGC 1 cut(s) 231
BbvI GCAGC 2 cut(s) 437, 1288
BccI CCATC 6 cut(s) 222, 281, 413, 440, 968, 1352
BceAI ACGGC 2 cut(s) 178, 603
BciVI GTATCC 1 cut(s) 591
BclI TGATCA 1 cut(s) 1125
BcnI CCSGG 2 cut(s) 251, 752
BcoDI GTCTC 6 cut(s) 248, 391, 527, 557, 1209, 1241
BfaI CTAG 5 cut(s) 812, 951, 1145, 1157, 1164
BfmI CTRYAG 3 cut(s) 622, 1288, 1386
BfuAI ACCTGC 2 cut(s) 581, 906
BfuI GTATCC 1 cut(s) 591
BglII AGATCT 2 cut(s) 499, 1284
BisI GCNGC 3 cut(s) 426, 1154, 1302
BlpI GCTNAGC 1 cut(s) 1106
BlsI GCNGC 3 cut(s) 427, 1155, 1303
Bme1390I CCNGG 2 cut(s) 251, 752
Bme18I GGWCC 3 cut(s) 367, 523, 1014
BmgBI CACGTC 1 cut(s) 146
BmgT120I GGNCC 4 cut(s) 367, 449, 523, 1014
BmiI GGNNCC 5 cut(s) 368, 369, 524, 525, 1026
BmrFI CCNGG 2 cut(s) 251, 752
BmsI GCATC 3 cut(s) 464, 760, 1313
BpiI GAAGAC 1 cut(s) 140
BpmI CTGGAG 2 cut(s) 621, 1397
Bpu10I CCTNAGC 2 cut(s) 231, 938
Bpu1102I GCTNAGC 1 cut(s) 1106
BpuMI CCSGG 2 cut(s) 251, 752
BsaI GGTCTC 1 cut(s) 527
BsaJI CCNNGG 6 cut(s) 41, 518, 585, 718, 1048, 1202
Bsc4I CCNNNNNNNGG 2 cut(s) 590, 1391
Bse1I ACTGG 2 cut(s) 341, 604
Bse21I CCTNAGG 1 cut(s) 850
BseDI CCNNGG 6 cut(s) 41, 518, 585, 718, 1048, 1202
BseGI GGATG 3 cut(s) 772, 1185, 1363
BseLI CCNNNNNNNGG 2 cut(s) 590, 1391
BseMII CTCAG 9 cut(s) 222, 372, 642, 681, 721, 1034, 1043, 1186, 1322
BseNI ACTGG 2 cut(s) 341, 604
BseXI GCAGC 2 cut(s) 437, 1288
BsgI GTGCAG 1 cut(s) 397
BshFI GGCC 4 cut(s) 5, 105, 236, 451
BshNI GGYRCC 1 cut(s) 1024
BsiSI CCGG 2 cut(s) 251, 752
BslFI GGGAC 4 cut(s) 233, 353, 509, 1103
BslI CCNNNNNNNGG 2 cut(s) 590, 1391
BsmAI GTCTC 6 cut(s) 248, 391, 527, 557, 1209, 1241
BsmBI CGTCTC 3 cut(s) 391, 557, 1209
BsmFI GGGAC 4 cut(s) 233, 353, 509, 1103
BsnI GGCC 4 cut(s) 5, 105, 236, 451
Bso31I GGTCTC 1 cut(s) 527
Bsp143I GATC 7 cut(s) 499, 570, 668, 1088, 1125, 1284, 1345
Bsp1720I GCTNAGC 1 cut(s) 1106
Bsp19I CCATGG 3 cut(s) 41, 518, 1048
BspACI CCGC 3 cut(s) 371, 1154, 1355
BspANI GGCC 4 cut(s) 5, 105, 236, 451
BspCNI CTCAG 9 cut(s) 223, 373, 643, 682, 720, 1035, 1042, 1185, 1321
BspHI TCATGA 2 cut(s) 462, 475
BspLI GGNNCC 5 cut(s) 368, 369, 524, 525, 1026
BspMI ACCTGC 2 cut(s) 581, 906
BspPI GGATC 2 cut(s) 578, 1096
BspT107I GGYRCC 1 cut(s) 1024
BspTNI GGTCTC 1 cut(s) 527
BsrI ACTGG 2 cut(s) 341, 604
BssECI CCNNGG 6 cut(s) 41, 518, 585, 718, 1048, 1202
BssMI GATC 7 cut(s) 499, 570, 668, 1088, 1125, 1284, 1345
BssSI CACGAG 1 cut(s) 1228
BssT1I CCWWGG 5 cut(s) 41, 518, 718, 1048, 1202
Bst2BI CACGAG 1 cut(s) 1228
Bst4CI ACNGT 4 cut(s) 112, 208, 551, 623
Bst6I CTCTTC 2 cut(s) 873, 938
BstC8I GCNNGC 1 cut(s) 453
BstDSI CCRYGG 4 cut(s) 41, 518, 585, 1048
BstEII GGTNACC 1 cut(s) 918
BstENI CCTNNNNNAGG 1 cut(s) 1389
BstF5I GGATG 3 cut(s) 772, 1185, 1363
BstKTI GATC 7 cut(s) 502, 573, 671, 1091, 1128, 1287, 1348
BstMAI GTCTC 6 cut(s) 248, 391, 527, 557, 1209, 1241
BstMBI GATC 7 cut(s) 499, 570, 668, 1088, 1125, 1284, 1345
BstMWI GCNNNNNNNGC 2 cut(s) 1219, 1241
BstNSI RCATGY 1 cut(s) 1262
BstPI GGTNACC 1 cut(s) 918
BstSCI CCNGG 2 cut(s) 249, 750
BstSFI CTRYAG 3 cut(s) 622, 1288, 1386
BstV1I GCAGC 2 cut(s) 437, 1288
BstV2I GAAGAC 1 cut(s) 140
BstX2I RGATCY 2 cut(s) 499, 1284
BstYI RGATCY 2 cut(s) 499, 1284
Bsu36I CCTNAGG 1 cut(s) 850
BsuI GTATCC 1 cut(s) 591
BsuRI GGCC 4 cut(s) 5, 105, 236, 451
BtgI CCRYGG 4 cut(s) 41, 518, 585, 1048
BtrI CACGTC 1 cut(s) 146
BtsCI GGATG 3 cut(s) 772, 1185, 1363
BtsI GCAGTG 1 cut(s) 39
BtsIMutI CAGTG 3 cut(s) 39, 240, 1180
BveI ACCTGC 2 cut(s) 581, 906
Cac8I GCNNGC 1 cut(s) 453
CciI TCATGA 2 cut(s) 462, 475
Cfr13I GGNCC 4 cut(s) 367, 449, 523, 1014
CseI GACGC 1 cut(s) 943
Csp6I GTAC 1 cut(s) 1025
CspCI CAANNNNNGTGG 4 cut(s) 816, 851, 982, 1017
CviQI GTAC 1 cut(s) 1025
DpnI GATC 7 cut(s) 501, 572, 670, 1090, 1127, 1286, 1347
DpnII GATC 7 cut(s) 499, 570, 668, 1088, 1125, 1284, 1345
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 2 cut(s) 873, 938
EarI CTCTTC 2 cut(s) 873, 938
Eco130I CCWWGG 5 cut(s) 41, 518, 718, 1048, 1202
Eco31I GGTCTC 1 cut(s) 527
Eco32I GATATC 1 cut(s) 352
Eco47I GGWCC 3 cut(s) 367, 523, 1014
Eco57I CTGAAG 4 cut(s) 293, 318, 516, 879
Eco81I CCTNAGG 1 cut(s) 850
Eco91I GGTNACC 1 cut(s) 918
EcoNI CCTNNNNNAGG 1 cut(s) 1389
EcoO109I RGGNCCY 2 cut(s) 367, 523
EcoO65I GGTNACC 1 cut(s) 918
EcoRV GATATC 1 cut(s) 352
EcoT14I CCWWGG 5 cut(s) 41, 518, 718, 1048, 1202
ErhI CCWWGG 5 cut(s) 41, 518, 718, 1048, 1202
Esp3I CGTCTC 3 cut(s) 391, 557, 1209
FaqI GGGAC 4 cut(s) 233, 353, 509, 1103
FauI CCCGC 1 cut(s) 378
FbaI TGATCA 1 cut(s) 1125
FblI GTMKAC 1 cut(s) 210
Fnu4HI GCNGC 3 cut(s) 426, 1154, 1302
FokI GGATG 3 cut(s) 779, 1192, 1370
Fsp4HI GCNGC 3 cut(s) 426, 1154, 1302
FspBI CTAG 5 cut(s) 812, 951, 1145, 1157, 1164
GluI GCNGC 3 cut(s) 426, 1154, 1302
GsuI CTGGAG 2 cut(s) 621, 1397
HaeIII GGCC 4 cut(s) 5, 105, 236, 451
HapII CCGG 2 cut(s) 251, 752
HgaI GACGC 1 cut(s) 943
HincII GTYRAC 1 cut(s) 211
HindII GTYRAC 1 cut(s) 211
HindIII AAGCTT 3 cut(s) 20, 300, 321
HpaII CCGG 2 cut(s) 251, 752
Hpy166II GTNNAC 5 cut(s) 211, 547, 713, 746, 1227
Hpy188I TCNGA 7 cut(s) 166, 273, 298, 652, 803, 1032, 1256
Hpy188III TCNNGA 5 cut(s) 463, 476, 1228, 1327, 1376
Hpy8I GTNNAC 5 cut(s) 211, 547, 713, 746, 1227
Hpy99I CGWCG 1 cut(s) 212
HpyAV CCTTC 3 cut(s) 127, 1094, 1271
HpyCH4III ACNGT 4 cut(s) 112, 208, 551, 623
HpyCH4IV ACGT 3 cut(s) 145, 416, 642
HpyCH4V TGCA 9 cut(s) 32, 76, 358, 414, 773, 915, 1244, 1304, 1342
HpyF10VI GCNNNNNNNGC 2 cut(s) 1219, 1241
HpySE526I ACGT 3 cut(s) 145, 416, 642
KflI GGGWCCC 2 cut(s) 367, 523
KpnI GGTACC 1 cut(s) 1028
Ksp22I TGATCA 1 cut(s) 1125
Kzo9I GATC 7 cut(s) 499, 570, 668, 1088, 1125, 1284, 1345
LmnI GCTCC 1 cut(s) 907
Lsp1109I GCAGC 2 cut(s) 437, 1288
LweI GCATC 3 cut(s) 464, 760, 1313
MaeI CTAG 5 cut(s) 812, 951, 1145, 1157, 1164
MaeII ACGT 3 cut(s) 145, 416, 642
MaeIII GTNAC 8 cut(s) 56, 134, 595, 862, 872, 918, 1069, 1139
MalI GATC 7 cut(s) 501, 572, 670, 1090, 1127, 1286, 1347
MboI GATC 7 cut(s) 499, 570, 668, 1088, 1125, 1284, 1345
MboII GAAGA 8 cut(s) 140, 286, 400, 509, 890, 955, 1283, 1286
MfeI CAATTG 2 cut(s) 701, 738
MflI RGATCY 2 cut(s) 499, 1284
MluCI AATT 5 cut(s) 178, 608, 701, 738, 867
MlyI GAGTC 3 cut(s) 250, 999, 1014
MmeI TCCRAC 2 cut(s) 189, 885
MnlI CCTC 9 cut(s) 172, 226, 492, 522, 561, 646, 775, 939, 1038
MroXI GAANNNNTTC 2 cut(s) 882, 1322
MseI TTAA 1 cut(s) 197
MspA1I CMGCKG 1 cut(s) 1094
MspI CCGG 2 cut(s) 251, 752
MspR9I CCNGG 2 cut(s) 251, 752
MunI CAATTG 2 cut(s) 701, 738
MwoI GCNNNNNNNGC 2 cut(s) 1219, 1241
NciI CCSGG 2 cut(s) 251, 752
NcoI CCATGG 3 cut(s) 41, 518, 1048
NdeII GATC 7 cut(s) 499, 570, 668, 1088, 1125, 1284, 1345
NlaIV GGNNCC 5 cut(s) 368, 369, 524, 525, 1026
NmeAIII GCCGAG 2 cut(s) 31, 369
NmuCI GTSAC 2 cut(s) 56, 862
NspI RCATGY 1 cut(s) 1262
PagI TCATGA 2 cut(s) 462, 475
PaqCI CACCTGC 1 cut(s) 581
PciI ACATGT 1 cut(s) 1258
PdmI GAANNNNTTC 2 cut(s) 882, 1322
PfeI GAWTC 7 cut(s) 64, 466, 697, 733, 883, 1198, 1381
PfoI TCCNGGA 1 cut(s) 249
PkrI GCNGC 3 cut(s) 427, 1155, 1303
PleI GAGTC 3 cut(s) 250, 998, 1013
PpsI GAGTC 3 cut(s) 250, 998, 1013
PpuMI RGGWCCY 2 cut(s) 367, 523
PscI ACATGT 1 cut(s) 1258
Psp5II RGGWCCY 2 cut(s) 367, 523
PspEI GGTNACC 1 cut(s) 918
PspN4I GGNNCC 5 cut(s) 368, 369, 524, 525, 1026
PspPI GGNCC 4 cut(s) 367, 449, 523, 1014
PspPPI RGGWCCY 2 cut(s) 367, 523
PsuI RGATCY 2 cut(s) 499, 1284
PvuII CAGCTG 1 cut(s) 1094
RsaI GTAC 1 cut(s) 1026
RsaNI GTAC 1 cut(s) 1025
SalI GTCGAC 1 cut(s) 209
SaqAI TTAA 1 cut(s) 197
SatI GCNGC 3 cut(s) 426, 1154, 1302
Sau3AI GATC 7 cut(s) 499, 570, 668, 1088, 1125, 1284, 1345
Sau96I GGNCC 4 cut(s) 367, 449, 523, 1014
SchI GAGTC 3 cut(s) 250, 999, 1014
ScrFI CCNGG 2 cut(s) 251, 752
SfaNI GCATC 3 cut(s) 464, 760, 1313
SfcI CTRYAG 3 cut(s) 622, 1288, 1386
SinI GGWCC 3 cut(s) 367, 523, 1014
Sse9I AATT 5 cut(s) 178, 608, 701, 738, 867
SsiI CCGC 3 cut(s) 371, 1154, 1355
SspI AATATT 1 cut(s) 1323
SspMI CTAG 5 cut(s) 812, 951, 1145, 1157, 1164
StyD4I CCNGG 2 cut(s) 249, 750
StyI CCWWGG 5 cut(s) 41, 518, 718, 1048, 1202
TaaI ACNGT 4 cut(s) 112, 208, 551, 623
TaiI ACGT 3 cut(s) 148, 419, 645
TaqI TCGA 4 cut(s) 210, 484, 684, 1368
TaqII GACCGA 1 cut(s) 1031
TasI AATT 5 cut(s) 178, 608, 701, 738, 867
TauI GCSGC 1 cut(s) 1156
TfiI GAWTC 7 cut(s) 64, 466, 697, 733, 883, 1198, 1381
Tru1I TTAA 1 cut(s) 197
Tru9I TTAA 1 cut(s) 197
TscAI CASTG 3 cut(s) 39, 247, 1180
TseFI GTSAC 2 cut(s) 56, 862
TseI GCWGC 2 cut(s) 425, 1301
Tsp45I GTSAC 2 cut(s) 56, 862
TspDTI ATGAA 3 cut(s) 14, 109, 1196
TspGWI ACGGA 1 cut(s) 163
TspRI CASTG 3 cut(s) 39, 247, 1180
VpaK11BI GGWCC 3 cut(s) 367, 523, 1014
XagI CCTNNNNNAGG 1 cut(s) 1389
XapI RAATTY 1 cut(s) 178
XceI RCATGY 1 cut(s) 1262
XcmI CCANNNNNNNNNTGG 1 cut(s) 1055
XmiI GTMKAC 1 cut(s) 210
XmnI GAANNNNTTC 2 cut(s) 882, 1322
XspI CTAG 5 cut(s) 812, 951, 1145, 1157, 1164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.