Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0003530

Physical Location & Seq

Genomic Coordinates Forward (+)

4597849 .. 4600603

Gene Structure 2755 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g06630.8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2232 bp

ATGGCAGACGCGTGGAGACAAAGGCCGCACAACCGTATTTTTACTGTAGAGAAGCTGGTAGAAAACATTGAGAAAGAATTTTTTAGAGATTTGAGTTTTATTATATATAGAATTTCTGATATCAAAAGCCTGAGAATCTCTGCTCTCACACCCAATCGTCGAACACATGGACAACAAAGATCAGAAGAAACTTCAAATAGCCATGTTCCCATGGCTAGCCTACGGCCACCTAATGCCATTTCTCGAGGTCTCCAAGTTCTTGGCTCAAAAGGCGCATCGTGTGATGATCGATCCTCCTCCTTTTCCCCGCTCATCGATTTCGTCGAGCTTCCTCTCCCCGCCGTCGACGGCTTGCCGGAATCCGCCGAGTCCACCTCCGAGCTACCAATCAACAAAGTCCCTTACCTCAAAAAAGCCTACGACTTGCTCAAGCCTTCAGTCACGCATTTCATCCAACTCTCGGGCGTCAACTGGGTTGTCCATGACTTCATTTGCTACTGGATGCCCAGAGTCGCCACTCAGGTCTACTTCAACATCACCAACGCCACTACCTTGGCTTTCTTCGGTCCTCCGTCCGAGTTACTCAGCGATAAACGCTGGCGGCCGGAGGACTTGACGGTCGTCCCCGAGTGGGTCGACTATCCTTCCAACGTTGCTTATAAGCTACATGAGATGGTGAGCCCCTGGGATGGCATGGACGACGAGGTCCTCGATTTTCAGAGACTCGGGCGTACGATTGAAGATTGTAAATTTGTGACTATGTGGAGCTGCACCGAGTTCGAATCTGACGCGGTGAGTCTGCTAAGGAAGATCTACGGCAAACCAGTTGTTCCACTCGGGCTGCTGCCGCCGGTCTCAGCGCCGCAACAGTACGGCGTCGCTGACGATCGAGGGGATGAGAAGTGGGAAGTGTTGAGAGAGTGGCTCGAAAATAAGAAACCAAACTCGGTGGTTTACATCGCCCTCGGCACCGAGGTGACTCTGAGTCAAGAGTTGATGCACGAGTTGGCACATGGGATAGAAAAATCCGGGTTGCCCTTTATTTGGGTGGTCAACAATCGCCCGTTAGTGGAGGGCGTGTTGGGCTCCGATATAATTCCATTCGGGTTTGAAACCCGAGTAGAGGATCGAGGCTTGGTCTTGAGAGGTTGGGCCCCACAACTTAAGATTCTAGGTCATATCTCGGTCGGGGGTTTCCTAACTCATTGTGGTTGGAGTTCAGTTGTCGAGGCGCTAGGGTACGGGCGGGCTTTGATTTTGTTTTCGGGTGCTAATTCGGACCAAGGGTTGATCGCGAGATTAATGCACGAGAAGCAGGTTGGGTTGGAGATTCCAAGGGATGAGCGAGATGGGTCGTTTATGAGTGACTCGGTAGCCGAGGTGACTAGGCGAGTGATGGTGGAGAAAGAAGGTGAGTCAATAAGGTCAAACGCATGGGTCATGAAGGAGATATTTGGCAATGTAGAGTTGAACAACAAGTGCTTGGACGAGTTCACTCGAGTCCTAGAAACCTGGAATACGGTACGGTACTTCAAGTGTTATAATACAAGCATTAATGTACCAAACTTTATTGTTCACATGCTGAAAAATTGTCTCCTAATTAACTTTGTTGCTTTACTTTTTAGTTTGTTATTTATTTTTTCTACCAACAATGAACTCTTCCATCTAATTCTCTTCATTAAACAATTTGGAATAACTTTAGCCGTTGGATCAAATTTCAATGACCCAGATTGTTTGATGAGGAGGATTATAAAAGTTTGCTATGTTTGCCATTCTGCCAATGTCGCGACACACCGTATGATTGAGTTGGCTATTTCTTCTACCTTAGATTTTTGGTTTTTTGAGGAGTCAATAAAACCACTACCGTTTCTCATCAAAAAAAAAAAAAAAAAAAAAAAATTGTTTGAAAGTCCTATATATCAATTAAATGCTAAGAAAGATTGGACTCTTTATCATTTTATATTTTTAGTCCTTACCTTGAGATTCTCAGCAATCACTACGTATCACATTTTTGGGTTAAAAAAAATCATTATATCAAGTAAATATAGTTTCCTCTCACATTCATTGCATGTACCATTACTTGCTCATCCTGAAAGAGAAGGAAAGGTGGCATTGACCCAAAGAGTAAAAAAGGCGGCTGAATCTCGTAAAGCGGGCGGCAGTTGCTCTAGTGTGGTGACAATGGCATCAGCAGCGATGGTGGTAAACAGCGGTAGGAGCCCGAGAAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0080043 GO:0080044

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGT

Protein Analysis

744

Amino Acids

84.32

Weight (kDa)

8.42

Isoelectric Point (pI)

42.07

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003530)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G65550
fragaria_vesca	FvH4_1g07960 FvH4_1g07960
malus_domestica	MD02G1083100.v1.1 MD02G1083300.v1.1 MD02G1083600.v1.1 MD02G1083800.v1.1 MD02G1084000.v1.1 MD10G1101200.v1.1 MD15G1211400.v1.1
prunus_persica	Prupe.7G205500_v2.0.a1 Prupe.I002600_v2.0.a1
pyrus_communis	pycom02g06610 pycom02g06630 pycom02g06640 pycom15g18790
rosa_chinensis	RchiOBHm_Chr2g0093841 RchiOBHm_Chr2g0093861
rosa_laevigata	RLG00000013086 RLG00000016441
rosa_multiflora	Rmu_co8040598.1_g000001 Rmu_sc0003027.1_g000010 Rmu_sc0003027.1_g000014 Rmu_sc0017523.1_g000004 Rmu_sc0017523.1_g000009
rosa_roxburghii	Rroxscaffold_2G00147710 Rroxscaffold_2G00147760
rosa_rugosa	Rorug02G0040100 Rorug02G0040100
rosa_samantha	Rh2BG087200 Rh2BG087400 Rh2CG089600 Rh2CG089800 Rh2DG085300 Rh2DG085500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	660, 1542, 1751
AasI	GACNNNNNNGTC	2 cut(s)	617, 704
Acc36I	ACCTGC	1 cut(s)	1306
AccB1I	GGYRCC	1 cut(s)	968
AccBSI	CCGCTC	1 cut(s)	310
AccI	GTMKAC	3 cut(s)	345, 525, 636
AccII	CGCG	4 cut(s)	11, 791, 1295, 1787
AclI	AACGTT	1 cut(s)	651
AclWI	GGATC	3 cut(s)	285, 1134, 1717
AcoI	YGGCCR	2 cut(s)	224, 602
AcsI	RAATTY	4 cut(s)	77, 111, 749, 1714
AcuI	CTGAAG	1 cut(s)	420
AcyI	GRCGYC	2 cut(s)	465, 876
AfaI	GTAC	7 cut(s)	733, 872, 1241, 1524, 1529, 1560, 2073
AfiI	CCNNNNNNNGG	6 cut(s)	460, 631, 689, 1044, 1069, 1123
AflII	CTTAAG	1 cut(s)	1163
AflIII	ACRYGT	1 cut(s)	9
AgsI	TTSAA	8 cut(s)	195, 532, 740, 1112, 1471, 1534, 1720, 1907
AhdI	GACNNNNNGTC	1 cut(s)	984
AjnI	CCWGG	2 cut(s)	683, 1511
AleI	CACNNNNGTG	1 cut(s)	974
AluBI	AGCT	6 cut(s)	55, 328, 382, 664, 768, 2229
AluI	AGCT	6 cut(s)	55, 328, 382, 664, 768, 2229
Alw26I	GTCTC	5 cut(s)	10, 254, 715, 859, 1598
AlwI	GGATC	3 cut(s)	285, 1134, 1717
Ama87I	CYCGRG	8 cut(s)	243, 460, 626, 725, 836, 1116, 1497, 2221
AoxI	GGCC	4 cut(s)	23, 224, 602, 1152
ApaI	GGGCCC	1 cut(s)	1156
ApeKI	GCWGC	4 cut(s)	768, 841, 844, 2192
ApoI	RAATTY	4 cut(s)	77, 111, 749, 1714
AseI	ATTAAT	2 cut(s)	1301, 1554
AspLEI	GCGC	3 cut(s)	275, 862, 1234
AspS9I	GGNCC	5 cut(s)	566, 706, 1152, 1153, 1279
AsuC2I	CCSGG	1 cut(s)	1030
AsuHPI	GGTGA	7 cut(s)	529, 688, 805, 988, 1393, 1424, 2188
AsuII	TTCGAA	1 cut(s)	780
AsuNHI	GCTAGC	1 cut(s)	215
AvaI	CYCGRG	8 cut(s)	243, 460, 626, 725, 836, 1116, 1497, 2221
AvaII	GGWCC	3 cut(s)	566, 706, 1279
BaeGI	GKGCMC	1 cut(s)	1156
BanI	GGYRCC	1 cut(s)	968
BanII	GRGCYC	4 cut(s)	683, 1088, 1156, 2222
BauI	CACGAG	2 cut(s)	1001, 1307
BbvI	GCAGC	4 cut(s)	755, 828, 831, 2204
BccI	CCATC	6 cut(s)	667, 683, 1343, 1390, 1671, 2191
BceAI	ACGGC	6 cut(s)	239, 326, 364, 832, 889, 1688
BcgI	CGANNNNNNTGC	4 cut(s)	760, 794, 1285, 1319
BciT130I	CCWGG	2 cut(s)	685, 1513
BcnI	CCSGG	1 cut(s)	1030
BcoDI	GTCTC	5 cut(s)	10, 254, 715, 859, 1598
BfaI	CTAG	6 cut(s)	216, 1172, 1235, 1386, 1505, 2169
BfmI	CTRYAG	1 cut(s)	45
BfoI	RGCGCY	2 cut(s)	863, 1235
BfrI	CTTAAG	1 cut(s)	1163
BfuAI	ACCTGC	1 cut(s)	1306
BglII	AGATCT	1 cut(s)	810
Bme1390I	CCNGG	3 cut(s)	685, 1030, 1513
Bme18I	GGWCC	3 cut(s)	566, 706, 1279
BmeRI	GACNNNNNGTC	1 cut(s)	984
BmeT110I	CYCGRG	8 cut(s)	243, 460, 626, 725, 836, 1116, 1497, 2221
BmgT120I	GGNCC	5 cut(s)	566, 706, 1152, 1153, 1279
BmiI	GGNNCC	5 cut(s)	970, 1087, 1154, 1155, 2219
BmrFI	CCNGG	3 cut(s)	685, 1030, 1513
BmrI	ACTGGG	1 cut(s)	481
BmsI	GCATC	4 cut(s)	284, 492, 987, 2195
BmtI	GCTAGC	1 cut(s)	219
BmuI	ACTGGG	1 cut(s)	481
BoxI	GACNNNNGTC	1 cut(s)	620
BplI	GAGNNNNNCTC	4 cut(s)	359, 391, 909, 941
Bpu10I	CCTNAGC	1 cut(s)	803
Bpu14I	TTCGAA	1 cut(s)	780
BpuEI	CTTGAG	3 cut(s)	413, 1162, 1999
BpuMI	CCSGG	1 cut(s)	1030
Bsa29I	ATCGAT	2 cut(s)	289, 315
BsaAI	YACGTR	1 cut(s)	2001
BsaHI	GRCGYC	2 cut(s)	465, 876
BsaI	GGTCTC	2 cut(s)	254, 859
BsaJI	CCNNGG	9 cut(s)	210, 552, 683, 684, 964, 972, 1282, 1334, 1377
BsaXI	ACNNNNNCTCC	2 cut(s)	1064, 1094
Bsc4I	CCNNNNNNNGG	6 cut(s)	460, 631, 689, 1044, 1069, 1123
Bse118I	RCCGGY	1 cut(s)	850
Bse1I	ACTGG	3 cut(s)	476, 503, 824
Bse3DI	GCAATG	2 cut(s)	1465, 2063
BseBI	CCWGG	2 cut(s)	685, 1513
BseCI	ATCGAT	2 cut(s)	289, 315
BseDI	CCNNGG	9 cut(s)	210, 552, 683, 684, 964, 972, 1282, 1334, 1377
BseGI	GGATG	6 cut(s)	450, 507, 694, 901, 1345, 2086
BseLI	CCNNNNNNNGG	6 cut(s)	460, 631, 689, 1044, 1069, 1123
BseMI	GCAATG	2 cut(s)	1465, 2063
BseMII	CTCAG	6 cut(s)	122, 533, 598, 870, 974, 2001
BseNI	ACTGG	3 cut(s)	476, 503, 824
BseRI	GAGGAG	3 cut(s)	286, 1756, 1859
BseSI	GKGCMC	1 cut(s)	1156
BseX3I	CGGCCG	1 cut(s)	602
BseXI	GCAGC	4 cut(s)	755, 828, 831, 2204
BsgI	GTGCAG	1 cut(s)	754
Bsh1236I	CGCG	4 cut(s)	11, 791, 1295, 1787
Bsh1285I	CGRYCG	4 cut(s)	605, 621, 889, 1188
BshFI	GGCC	4 cut(s)	25, 226, 604, 1154
BshNI	GGYRCC	1 cut(s)	968
BshVI	ATCGAT	2 cut(s)	289, 315
BsiEI	CGRYCG	4 cut(s)	605, 621, 889, 1188
BsiHKCI	CYCGRG	8 cut(s)	243, 460, 626, 725, 836, 1116, 1497, 2221
BsiSI	CCGG	4 cut(s)	356, 605, 851, 1029
BsiWI	CGTACG	1 cut(s)	731
BslFI	GGGAC	2 cut(s)	383, 608
BslI	CCNNNNNNNGG	6 cut(s)	460, 631, 689, 1044, 1069, 1123
BsmAI	GTCTC	5 cut(s)	10, 254, 715, 859, 1598
BsmFI	GGGAC	2 cut(s)	383, 608
BsnI	GGCC	4 cut(s)	25, 226, 604, 1154
Bso31I	GGTCTC	2 cut(s)	254, 859
BsoBI	CYCGRG	8 cut(s)	243, 460, 626, 725, 836, 1116, 1497, 2221
Bsp119I	TTCGAA	1 cut(s)	780
Bsp120I	GGGCCC	1 cut(s)	1152
Bsp1286I	GDGCHC	4 cut(s)	683, 1088, 1156, 2222
Bsp143I	GATC	8 cut(s)	179, 286, 290, 810, 886, 1126, 1290, 1709
Bsp19I	CCATGG	1 cut(s)	210
Bsp68I	TCGCGA	2 cut(s)	1295, 1787
BspANI	GGCC	4 cut(s)	25, 226, 604, 1154
BspCNI	CTCAG	6 cut(s)	123, 532, 597, 869, 975, 2000
BspDI	ATCGAT	2 cut(s)	289, 315
BspFNI	CGCG	4 cut(s)	11, 791, 1295, 1787
BspHI	TCATGA	1 cut(s)	1440
BspLI	GGNNCC	5 cut(s)	970, 1087, 1154, 1155, 2219
BspMI	ACCTGC	1 cut(s)	1306
BspOI	GCTAGC	1 cut(s)	219
BspPI	GGATC	3 cut(s)	285, 1134, 1717
BspT104I	TTCGAA	1 cut(s)	780
BspT107I	GGYRCC	1 cut(s)	968
BspTI	CTTAAG	1 cut(s)	1163
BspTNI	GGTCTC	2 cut(s)	254, 859
BsrBI	CCGCTC	1 cut(s)	310
BsrDI	GCAATG	2 cut(s)	1465, 2063
BsrFI	RCCGGY	1 cut(s)	850
BsrI	ACTGG	3 cut(s)	476, 503, 824
BssAI	RCCGGY	1 cut(s)	850
BssECI	CCNNGG	9 cut(s)	210, 552, 683, 684, 964, 972, 1282, 1334, 1377
BssMI	GATC	8 cut(s)	179, 286, 290, 810, 886, 1126, 1290, 1709
BssNI	GRCGYC	2 cut(s)	465, 876
BssSI	CACGAG	2 cut(s)	1001, 1307
BssT1I	CCWWGG	4 cut(s)	210, 552, 1282, 1334
Bst2BI	CACGAG	2 cut(s)	1001, 1307
Bst2UI	CCWGG	2 cut(s)	685, 1513
Bst4CI	ACNGT	8 cut(s)	35, 46, 619, 870, 1522, 1527, 1796, 1866
Bst6I	CTCTTC	2 cut(s)	1664, 1679
BstACI	GRCGYC	2 cut(s)	465, 876
BstAFI	CTTAAG	1 cut(s)	1163
BstBAI	YACGTR	1 cut(s)	2001
BstBI	TTCGAA	1 cut(s)	780
BstC8I	GCNNGC	5 cut(s)	217, 353, 599, 1248, 2155
BstDEI	CTNAG	9 cut(s)	131, 519, 584, 803, 856, 983, 1825, 1932, 1987
BstDSI	CCRYGG	1 cut(s)	210
BstF5I	GGATG	6 cut(s)	450, 507, 694, 901, 1345, 2086
BstFNI	CGCG	4 cut(s)	11, 791, 1295, 1787
BstH2I	RGCGCY	2 cut(s)	863, 1235
BstHHI	GCGC	3 cut(s)	275, 862, 1234
BstKTI	GATC	8 cut(s)	182, 289, 293, 813, 889, 1129, 1293, 1712
BstMAI	GTCTC	5 cut(s)	10, 254, 715, 859, 1598
BstMBI	GATC	8 cut(s)	179, 286, 290, 810, 886, 1126, 1290, 1709
BstMCI	CGRYCG	4 cut(s)	605, 621, 889, 1188
BstNI	CCWGG	2 cut(s)	685, 1513
BstNSI	RCATGY	2 cut(s)	1582, 2072
BstPAI	GACNNNNGTC	1 cut(s)	620
BstSCI	CCNGG	3 cut(s)	683, 1028, 1511
BstSFI	CTRYAG	1 cut(s)	45
BstSLI	GKGCMC	1 cut(s)	1156
BstSNI	TACGTA	1 cut(s)	2001
BstUI	CGCG	4 cut(s)	11, 791, 1295, 1787
BstV1I	GCAGC	4 cut(s)	755, 828, 831, 2204
BstX2I	RGATCY	1 cut(s)	810
BstXI	CCANNNNNNTGG	2 cut(s)	260, 553
BstYI	RGATCY	1 cut(s)	810
BstZI	CGGCCG	1 cut(s)	602
Bsu15I	ATCGAT	2 cut(s)	289, 315
BsuRI	GGCC	4 cut(s)	25, 226, 604, 1154
BsuTUI	ATCGAT	2 cut(s)	289, 315
BtgI	CCRYGG	1 cut(s)	210
BtgZI	GCGATG	2 cut(s)	943, 2210
BtsCI	GGATG	6 cut(s)	450, 507, 694, 901, 1345, 2086
BtuMI	TCGCGA	2 cut(s)	1295, 1787
BveI	ACCTGC	1 cut(s)	1306
Cac8I	GCNNGC	5 cut(s)	217, 353, 599, 1248, 2155
CciI	TCATGA	1 cut(s)	1440
CfoI	GCGC	3 cut(s)	275, 862, 1234
Cfr10I	RCCGGY	1 cut(s)	850
Cfr13I	GGNCC	5 cut(s)	566, 706, 1152, 1153, 1279
ClaI	ATCGAT	2 cut(s)	289, 315
CseI	GACGC	4 cut(s)	17, 454, 797, 865
Csp6I	GTAC	7 cut(s)	732, 871, 1240, 1523, 1528, 1559, 2072
CspCI	CAANNNNNGTGG	2 cut(s)	930, 965
CviQI	GTAC	7 cut(s)	732, 871, 1240, 1523, 1528, 1559, 2072
DdeI	CTNAG	9 cut(s)	131, 519, 584, 803, 856, 983, 1825, 1932, 1987
DpnI	GATC	8 cut(s)	181, 288, 292, 812, 888, 1128, 1292, 1711
DpnII	GATC	8 cut(s)	179, 286, 290, 810, 886, 1126, 1290, 1709
DrdI	GACNNNNNNGTC	2 cut(s)	617, 704
DriI	GACNNNNNGTC	1 cut(s)	984
DseDI	GACNNNNNNGTC	2 cut(s)	617, 704
EaeI	YGGCCR	2 cut(s)	224, 602
EagI	CGGCCG	1 cut(s)	602
Eam1104I	CTCTTC	2 cut(s)	1664, 1679
Eam1105I	GACNNNNNGTC	1 cut(s)	984
EarI	CTCTTC	2 cut(s)	1664, 1679
EciI	GGCGGA	1 cut(s)	352
EclXI	CGGCCG	1 cut(s)	602
Eco105I	TACGTA	1 cut(s)	2001
Eco130I	CCWWGG	4 cut(s)	210, 552, 1282, 1334
Eco24I	GRGCYC	4 cut(s)	683, 1088, 1156, 2222
Eco31I	GGTCTC	2 cut(s)	254, 859
Eco32I	GATATC	1 cut(s)	121
Eco47I	GGWCC	3 cut(s)	566, 706, 1279
Eco52I	CGGCCG	1 cut(s)	602
Eco57I	CTGAAG	1 cut(s)	420
Eco88I	CYCGRG	8 cut(s)	243, 460, 626, 725, 836, 1116, 1497, 2221
EcoO109I	RGGNCCY	2 cut(s)	706, 1153
EcoRII	CCWGG	2 cut(s)	683, 1511
EcoRV	GATATC	1 cut(s)	121
EcoT14I	CCWWGG	4 cut(s)	210, 552, 1282, 1334
EcoT38I	GRGCYC	4 cut(s)	683, 1088, 1156, 2222
ErhI	CCWWGG	4 cut(s)	210, 552, 1282, 1334
FaqI	GGGAC	2 cut(s)	383, 608
FauI	CCCGC	4 cut(s)	315, 346, 1239, 2146
FblI	GTMKAC	3 cut(s)	345, 525, 636
FokI	GGATG	6 cut(s)	437, 514, 701, 908, 1352, 2073
FriOI	GRGCYC	4 cut(s)	683, 1088, 1156, 2222
FspBI	CTAG	6 cut(s)	216, 1172, 1235, 1386, 1505, 2169
GlaI	GCGC	3 cut(s)	274, 861, 1233
HaeII	RGCGCY	2 cut(s)	863, 1235
HaeIII	GGCC	4 cut(s)	25, 226, 604, 1154
HapII	CCGG	4 cut(s)	356, 605, 851, 1029
HgaI	GACGC	4 cut(s)	17, 454, 797, 865
HhaI	GCGC	3 cut(s)	275, 862, 1234
Hin1I	GRCGYC	2 cut(s)	465, 876
Hin6I	GCGC	3 cut(s)	273, 860, 1232
HinP1I	GCGC	3 cut(s)	273, 860, 1232
HincII	GTYRAC	4 cut(s)	346, 469, 637, 1054
HindII	GTYRAC	4 cut(s)	346, 469, 637, 1054
HpaII	CCGG	4 cut(s)	356, 605, 851, 1029
HphI	GGTGA	7 cut(s)	529, 688, 805, 988, 1393, 1424, 2188
Hpy188I	TCNGA	9 cut(s)	118, 184, 379, 577, 720, 787, 984, 1090, 1279
Hpy188III	TCNNGA	7 cut(s)	243, 989, 1141, 1294, 1441, 1786, 2090
Hpy99I	CGWCG	6 cut(s)	162, 326, 347, 350, 704, 881
HpyAV	CCTTC	5 cut(s)	444, 654, 1403, 1438, 2093
HpyCH4III	ACNGT	8 cut(s)	35, 46, 619, 870, 1522, 1527, 1796, 1866
HpyCH4IV	ACGT	2 cut(s)	651, 2000
HpyCH4V	TGCA	4 cut(s)	771, 1000, 1306, 2068
HpyF3I	CTNAG	9 cut(s)	131, 519, 584, 803, 856, 983, 1825, 1932, 1987
HpySE526I	ACGT	2 cut(s)	651, 2000
Hsp92I	GRCGYC	2 cut(s)	465, 876
HspAI	GCGC	3 cut(s)	273, 860, 1232
Kzo9I	GATC	8 cut(s)	179, 286, 290, 810, 886, 1126, 1290, 1709
LmnI	GCTCC	3 cut(s)	765, 1091, 2217
Lsp1109I	GCAGC	4 cut(s)	755, 828, 831, 2204
LweI	GCATC	4 cut(s)	284, 492, 987, 2195
MaeI	CTAG	6 cut(s)	216, 1172, 1235, 1386, 1505, 2169
MaeII	ACGT	2 cut(s)	651, 2000
MaeIII	GTNAC	7 cut(s)	439, 579, 754, 976, 1364, 1381, 2176
MalI	GATC	8 cut(s)	181, 288, 292, 812, 888, 1128, 1292, 1711
MbiI	CCGCTC	1 cut(s)	310
MboI	GATC	8 cut(s)	179, 286, 290, 810, 886, 1126, 1290, 1709
MboII	GAAGA	7 cut(s)	197, 553, 752, 820, 1651, 1666, 1809
MflI	RGATCY	1 cut(s)	810
MhlI	GDGCHC	4 cut(s)	683, 1088, 1156, 2222
MluI	ACGCGT	1 cut(s)	9
MmeI	TCCRAC	5 cut(s)	478, 672, 1193, 1305, 1687
MseI	TTAA	7 cut(s)	1164, 1301, 1554, 1602, 1680, 1925, 2018
MslI	CAYNNNNRTG	1 cut(s)	974
MspA1I	CMGCKG	1 cut(s)	2211
MspCI	CTTAAG	1 cut(s)	1163
MspI	CCGG	4 cut(s)	356, 605, 851, 1029
MspR9I	CCNGG	3 cut(s)	685, 1030, 1513
MvaI	CCWGG	2 cut(s)	685, 1513
MvnI	CGCG	4 cut(s)	11, 791, 1295, 1787
NciI	CCSGG	1 cut(s)	1030
NcoI	CCATGG	1 cut(s)	210
NdeII	GATC	8 cut(s)	179, 286, 290, 810, 886, 1126, 1290, 1709
NheI	GCTAGC	1 cut(s)	215
NlaIV	GGNNCC	5 cut(s)	970, 1087, 1154, 1155, 2219
NmeAIII	GCCGAG	3 cut(s)	391, 945, 1402
NmuCI	GTSAC	6 cut(s)	439, 754, 976, 1364, 1381, 2176
NruI	TCGCGA	2 cut(s)	1295, 1787
NspI	RCATGY	2 cut(s)	1582, 2072
NspV	TTCGAA	1 cut(s)	780
OliI	CACNNNNGTG	1 cut(s)	974
PaeR7I	CTCGAG	2 cut(s)	243, 1497
PagI	TCATGA	1 cut(s)	1440
PasI	CCCWGGG	1 cut(s)	684
PcsI	WCGNNNNNNNCGW	2 cut(s)	321, 708
PfeI	GAWTC	7 cut(s)	135, 359, 782, 1168, 1330, 1983, 2141
Pfl23II	CGTACG	1 cut(s)	731
PflFI	GACNNNGTC	1 cut(s)	704
Ple19I	CGATCG	1 cut(s)	889
Ppu21I	YACGTR	1 cut(s)	2001
PpuMI	RGGWCCY	1 cut(s)	706
PshAI	GACNNNNGTC	1 cut(s)	620
PshBI	ATTAAT	2 cut(s)	1301, 1554
PsiI	TTATAA	3 cut(s)	660, 1542, 1751
Psp1406I	AACGTT	1 cut(s)	651
Psp5II	RGGWCCY	1 cut(s)	706
Psp6I	CCWGG	2 cut(s)	683, 1511
PspGI	CCWGG	2 cut(s)	683, 1511
PspLI	CGTACG	1 cut(s)	731
PspN4I	GGNNCC	5 cut(s)	970, 1087, 1154, 1155, 2219
PspOMI	GGGCCC	1 cut(s)	1152
PspPI	GGNCC	5 cut(s)	566, 706, 1152, 1153, 1279
PspPPI	RGGWCCY	1 cut(s)	706
PspXI	VCTCGAGB	1 cut(s)	1497
PsuI	RGATCY	1 cut(s)	810
PsyI	GACNNNGTC	1 cut(s)	704
PvuI	CGATCG	1 cut(s)	889
RruI	TCGCGA	2 cut(s)	1295, 1787
RsaI	GTAC	7 cut(s)	733, 872, 1241, 1524, 1529, 1560, 2073
RsaNI	GTAC	7 cut(s)	732, 871, 1240, 1523, 1528, 1559, 2072
RseI	CAYNNNNRTG	1 cut(s)	974
SalI	GTCGAC	2 cut(s)	344, 635
SaqAI	TTAA	7 cut(s)	1164, 1301, 1554, 1602, 1680, 1925, 2018
Sau3AI	GATC	8 cut(s)	179, 286, 290, 810, 886, 1126, 1290, 1709
Sau96I	GGNCC	5 cut(s)	566, 706, 1152, 1153, 1279
ScrFI	CCNGG	3 cut(s)	685, 1030, 1513
SduI	GDGCHC	4 cut(s)	683, 1088, 1156, 2222
SfaNI	GCATC	4 cut(s)	284, 492, 987, 2195
SfcI	CTRYAG	1 cut(s)	45
Sfr274I	CTCGAG	2 cut(s)	243, 1497
SfuI	TTCGAA	1 cut(s)	780
SgrDI	CGTCGACG	1 cut(s)	344
SinI	GGWCC	3 cut(s)	566, 706, 1279
SlaI	CTCGAG	2 cut(s)	243, 1497
SmiMI	CAYNNNNRTG	1 cut(s)	974
SmlI	CTYRAG	6 cut(s)	243, 428, 1141, 1163, 1497, 1978
SmoI	CTYRAG	6 cut(s)	243, 428, 1141, 1163, 1497, 1978
SnaBI	TACGTA	1 cut(s)	2001
SspMI	CTAG	6 cut(s)	216, 1172, 1235, 1386, 1505, 2169
StyD4I	CCNGG	3 cut(s)	683, 1028, 1511
StyI	CCWWGG	4 cut(s)	210, 552, 1282, 1334
TaaI	ACNGT	8 cut(s)	35, 46, 619, 870, 1522, 1527, 1796, 1866
TaiI	ACGT	2 cut(s)	654, 2003
TaqII	GACCGA	2 cut(s)	554, 1174
TauI	GCSGC	6 cut(s)	28, 604, 850, 865, 2138, 2160
TfiI	GAWTC	7 cut(s)	135, 359, 782, 1168, 1330, 1983, 2141
Tru1I	TTAA	7 cut(s)	1164, 1301, 1554, 1602, 1680, 1925, 2018
Tru9I	TTAA	7 cut(s)	1164, 1301, 1554, 1602, 1680, 1925, 2018
TseFI	GTSAC	6 cut(s)	439, 754, 976, 1364, 1381, 2176
TseI	GCWGC	4 cut(s)	768, 841, 844, 2192
Tsp45I	GTSAC	6 cut(s)	439, 754, 976, 1364, 1381, 2176
TspDTI	ATGAA	6 cut(s)	439, 478, 1457, 1666, 1668, 2052
TspGWI	ACGGA	1 cut(s)	561
Tth111I	GACNNNGTC	1 cut(s)	704
Vha464I	CTTAAG	1 cut(s)	1163
VpaK11BI	GGWCC	3 cut(s)	566, 706, 1279
VspI	ATTAAT	2 cut(s)	1301, 1554
XapI	RAATTY	4 cut(s)	77, 111, 749, 1714
XceI	RCATGY	2 cut(s)	1582, 2072
XhoI	CTCGAG	2 cut(s)	243, 1497
XmiI	GTMKAC	3 cut(s)	345, 525, 636
XspI	CTAG	6 cut(s)	216, 1172, 1235, 1386, 1505, 2169

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.