Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0003530

Physical Location & Seq

Genomic Coordinates Reverse (-)

18992254 .. 18997466

Gene Structure 5213 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G205500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1008 bp

ATGGAGAACAAAGATAATCAGAAGCTTCACATCGCCATGTTCCCATGGCTAGCCTATGGCCACATAATGCCATTTCTCGAAGTCTCCAAGTTCTTAGCTCAAAAGGGTCACCGAGTCTCCTTCATCTCCACCCCCAAAAACATCCAGCGCCTCCCCATATCATCCCTATCTCCTCTCATAACTTTCATCGAGCTTCCTCTGCCGGCCATTGAAGGCTTGCCACATTCCACAGAGTCCACCTCCGAGCTACCAATTCACAAAGTCCCTTTCCTCAAAAAAGCCTACGACTTGCTCCAGTCTCCACTCACGCATTTCCTCCAACACTCGGACGTCAACTGGGTCATCCACGACTTCATTTGCCATTGGCTACCCCGAGTCGCGACTCAGCTCGGAATCAACTCGGTTTACTTCAACATCTTCAGTGCCACTACATTGGCTTTCCTTGGCCCTCCCTCTGAGCTACGCGGAGGTCAACGCCAGCTGCCGGAGGACTTCACGGTTGTGCCGAAATGGGTTGACTTTCCTTCTAATGTTGCTTTTAAGCTCCATGAGATGGTAAGCCACTGGGACTGCATGGACGATGAGGTCTCCGATTTTCAGAGGTTCGCGGATGCGATTCAATATTGTAACTTGGTGACCACGAGGAGCACTCCCGAGTTCGAATCCGACTCAGTCAGTTTACTCAGGAAACTGTACGGTAAACCCGTTGTTCCACTCGGGTTGTTGCCACCCAGCTCAGTGCCACGTCAGCACGGTGGCGCTGATGATCAGGTGGATGAGAAGTGGGAAGTGTTGAGAGAGTGGCTCGACAATAAGAAAGAGAAATCAGTGATTTACATCGCACTCGGTACTGAGGTGACTCTGAGTCAAGAGTTGATGCACGAGTTAGCTCATGGAATAGAGAAATCCGGGTTGCCTTTTATTTGGGTGGTCAACAATCGCCCATTAGATGGAAGGCATGTTGGGTGCGGATATTATTCCACCCGAGTTTCAAACTCGGGTGGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0080043 GO:0080044

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGT

Protein Analysis

336

Amino Acids

37.97

Weight (kDa)

6.09

Isoelectric Point (pI)

52.08

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003530)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G65550
fragaria_vesca	FvH4_1g07960 FvH4_1g07960
malus_domestica	MD02G1083100.v1.1 MD02G1083300.v1.1 MD02G1083600.v1.1 MD02G1083800.v1.1 MD02G1084000.v1.1 MD10G1101200.v1.1 MD15G1211400.v1.1
prunus_persica	Prupe.7G205500_v2.0.a1 Prupe.I002600_v2.0.a1
pyrus_communis	pycom02g06610 pycom02g06630 pycom02g06640 pycom15g18790
rosa_chinensis	RchiOBHm_Chr2g0093841 RchiOBHm_Chr2g0093861
rosa_laevigata	RLG00000013086 RLG00000016441
rosa_multiflora	Rmu_co8040598.1_g000001 Rmu_sc0003027.1_g000010 Rmu_sc0003027.1_g000014 Rmu_sc0017523.1_g000004 Rmu_sc0017523.1_g000009
rosa_roxburghii	Rroxscaffold_2G00147710 Rroxscaffold_2G00147760
rosa_rugosa	Rorug02G0040100 Rorug02G0040100
rosa_samantha	Rh2BG087200 Rh2BG087400 Rh2CG089600 Rh2CG089800 Rh2DG085300 Rh2DG085500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	584
AatII	GACGTC	1 cut(s)	333
AccB7I	CCANNNNNTGG	2 cut(s)	553, 950
AccII	CGCG	3 cut(s)	380, 465, 608
AciI	CCGC	3 cut(s)	465, 608, 969
AcoI	YGGCCR	2 cut(s)	58, 204
AcuI	CTGAAG	1 cut(s)	403
AcyI	GRCGYC	1 cut(s)	330
AfaI	GTAC	2 cut(s)	695, 850
AfiI	CCNNNNNNNGG	4 cut(s)	325, 484, 553, 950
AgsI	TTSAA	4 cut(s)	212, 412, 620, 993
AhdI	GACNNNNNGTC	1 cut(s)	864
AjiI	CACGTC	1 cut(s)	746
AleI	CACNNNNGTG	1 cut(s)	500
Alw21I	GWGCWC	1 cut(s)	650
Alw26I	GTCTC	4 cut(s)	88, 121, 303, 592
Ama87I	CYCGRG	5 cut(s)	372, 653, 716, 984, 997
AoxI	GGCC	3 cut(s)	58, 204, 445
ApeKI	GCWGC	1 cut(s)	481
AspLEI	GCGC	2 cut(s)	150, 761
AspS9I	GGNCC	1 cut(s)	446
AsuC2I	CCSGG	1 cut(s)	910
AsuHPI	GGTGA	3 cut(s)	101, 646, 868
AsuII	TTCGAA	1 cut(s)	660
AsuNHI	GCTAGC	1 cut(s)	49
AvaI	CYCGRG	5 cut(s)	372, 653, 716, 984, 997
BaeI	ACNNNNGTAYC	2 cut(s)	840, 873
BalI	TGGCCA	1 cut(s)	60
BauI	CACGAG	2 cut(s)	640, 881
Bbv12I	GWGCWC	1 cut(s)	650
BbvI	GCAGC	1 cut(s)	468
BccI	CCATC	2 cut(s)	547, 944
BclI	TGATCA	1 cut(s)	766
BcnI	CCSGG	1 cut(s)	910
BcoDI	GTCTC	4 cut(s)	88, 121, 303, 592
BfaI	CTAG	1 cut(s)	50
BfoI	RGCGCY	2 cut(s)	151, 762
BisI	GCNGC	1 cut(s)	482
BlsI	GCNGC	1 cut(s)	483
Bme1390I	CCNGG	1 cut(s)	910
BmeRI	GACNNNNNGTC	1 cut(s)	864
BmeT110I	CYCGRG	5 cut(s)	372, 653, 716, 984, 997
BmgBI	CACGTC	1 cut(s)	746
BmgT120I	GGNCC	1 cut(s)	446
BmrFI	CCNGG	1 cut(s)	910
BmrI	ACTGGG	2 cut(s)	346, 574
BmsI	GCATC	2 cut(s)	601, 867
BmtI	GCTAGC	1 cut(s)	53
BmuI	ACTGGG	2 cut(s)	346, 574
BplI	GAGNNNNNCTC	6 cut(s)	224, 256, 634, 666, 789, 821
BpmI	CTGGAG	1 cut(s)	278
Bpu14I	TTCGAA	1 cut(s)	660
BpuMI	CCSGG	1 cut(s)	910
BsaBI	GATNNNNATC	1 cut(s)	836
BsaHI	GRCGYC	1 cut(s)	330
BsaI	GGTCTC	1 cut(s)	592
BsaJI	CCNNGG	2 cut(s)	44, 442
BsaXI	ACNNNNNCTCC	2 cut(s)	101, 131
Bsc4I	CCNNNNNNNGG	4 cut(s)	325, 484, 553, 950
Bse118I	RCCGGY	1 cut(s)	202
Bse1I	ACTGG	3 cut(s)	295, 341, 569
Bse8I	GATNNNNATC	1 cut(s)	836
BseDI	CCNNGG	2 cut(s)	44, 442
BseGI	GGATG	5 cut(s)	141, 161, 342, 616, 781
BseJI	GATNNNNATC	1 cut(s)	836
BseLI	CCNNNNNNNGG	4 cut(s)	325, 484, 553, 950
BseMII	CTCAG	7 cut(s)	398, 447, 684, 697, 750, 843, 854
BseNI	ACTGG	3 cut(s)	295, 341, 569
BseRI	GAGGAG	2 cut(s)	162, 658
BseXI	GCAGC	1 cut(s)	468
BseYI	CCCAGC	1 cut(s)	731
Bsh1236I	CGCG	3 cut(s)	380, 465, 608
BshFI	GGCC	3 cut(s)	60, 206, 447
BsiHKAI	GWGCWC	1 cut(s)	650
BsiHKCI	CYCGRG	5 cut(s)	372, 653, 716, 984, 997
BsiSI	CCGG	3 cut(s)	203, 485, 909
BslFI	GGGAC	2 cut(s)	248, 581
BslI	CCNNNNNNNGG	4 cut(s)	325, 484, 553, 950
BsmAI	GTCTC	4 cut(s)	88, 121, 303, 592
BsmFI	GGGAC	2 cut(s)	248, 581
BsnI	GGCC	3 cut(s)	60, 206, 447
Bso31I	GGTCTC	1 cut(s)	592
BsoBI	CYCGRG	5 cut(s)	372, 653, 716, 984, 997
Bsp119I	TTCGAA	1 cut(s)	660
Bsp1286I	GDGCHC	1 cut(s)	650
Bsp143I	GATC	1 cut(s)	766
Bsp19I	CCATGG	1 cut(s)	44
Bsp68I	TCGCGA	1 cut(s)	380
BspACI	CCGC	3 cut(s)	465, 608, 969
BspANI	GGCC	3 cut(s)	60, 206, 447
BspCNI	CTCAG	7 cut(s)	397, 448, 683, 696, 749, 844, 855
BspFNI	CGCG	3 cut(s)	380, 465, 608
BspOI	GCTAGC	1 cut(s)	53
BspT104I	TTCGAA	1 cut(s)	660
BspTNI	GGTCTC	1 cut(s)	592
BsrFI	RCCGGY	1 cut(s)	202
BsrI	ACTGG	3 cut(s)	295, 341, 569
BssAI	RCCGGY	1 cut(s)	202
BssECI	CCNNGG	2 cut(s)	44, 442
BssMI	GATC	1 cut(s)	766
BssNI	GRCGYC	1 cut(s)	330
BssSI	CACGAG	2 cut(s)	640, 881
BssT1I	CCWWGG	2 cut(s)	44, 442
Bst2BI	CACGAG	2 cut(s)	640, 881
Bst4CI	ACNGT	4 cut(s)	499, 693, 698, 755
BstACI	GRCGYC	1 cut(s)	330
BstBI	TTCGAA	1 cut(s)	660
BstC8I	GCNNGC	4 cut(s)	51, 204, 218, 479
BstDEI	CTNAG	8 cut(s)	94, 384, 456, 670, 683, 736, 852, 863
BstDSI	CCRYGG	1 cut(s)	44
BstEII	GGTNACC	2 cut(s)	107, 634
BstF5I	GGATG	5 cut(s)	141, 161, 342, 616, 781
BstFNI	CGCG	3 cut(s)	380, 465, 608
BstH2I	RGCGCY	2 cut(s)	151, 762
BstHHI	GCGC	2 cut(s)	150, 761
BstKTI	GATC	1 cut(s)	769
BstMAI	GTCTC	4 cut(s)	88, 121, 303, 592
BstMBI	GATC	1 cut(s)	766
BstMWI	GCNNNNNNNGC	2 cut(s)	199, 748
BstNSI	RCATGY	1 cut(s)	962
BstPI	GGTNACC	2 cut(s)	107, 634
BstSCI	CCNGG	1 cut(s)	908
BstUI	CGCG	3 cut(s)	380, 465, 608
BstV1I	GCAGC	1 cut(s)	468
BstXI	CCANNNNNNTGG	1 cut(s)	433
BsuRI	GGCC	3 cut(s)	60, 206, 447
BtgI	CCRYGG	1 cut(s)	44
BtgZI	GCGATG	2 cut(s)	16, 823
BtrI	CACGTC	1 cut(s)	746
BtsCI	GGATG	5 cut(s)	141, 161, 342, 616, 781
BtsIMutI	CAGTG	4 cut(s)	427, 562, 744, 834
BtuMI	TCGCGA	1 cut(s)	380
Cac8I	GCNNGC	4 cut(s)	51, 204, 218, 479
CfoI	GCGC	2 cut(s)	150, 761
Cfr10I	RCCGGY	1 cut(s)	202
Cfr13I	GGNCC	1 cut(s)	446
Csp6I	GTAC	2 cut(s)	694, 849
CspCI	CAANNNNNGTGG	2 cut(s)	702, 737
CviAII	CATG	6 cut(s)	37, 45, 548, 574, 893, 959
CviQI	GTAC	2 cut(s)	694, 849
DdeI	CTNAG	8 cut(s)	94, 384, 456, 670, 683, 736, 852, 863
DpnI	GATC	1 cut(s)	768
DpnII	GATC	1 cut(s)	766
DrdI	GACNNNNNNGTC	1 cut(s)	584
DriI	GACNNNNNGTC	1 cut(s)	864
DseDI	GACNNNNNNGTC	1 cut(s)	584
EaeI	YGGCCR	2 cut(s)	58, 204
Eam1105I	GACNNNNNGTC	1 cut(s)	864
Eco130I	CCWWGG	2 cut(s)	44, 442
Eco31I	GGTCTC	1 cut(s)	592
Eco57I	CTGAAG	1 cut(s)	403
Eco88I	CYCGRG	5 cut(s)	372, 653, 716, 984, 997
Eco91I	GGTNACC	2 cut(s)	107, 634
EcoO65I	GGTNACC	2 cut(s)	107, 634
EcoT14I	CCWWGG	2 cut(s)	44, 442
ErhI	CCWWGG	2 cut(s)	44, 442
FaeI	CATG	6 cut(s)	40, 48, 551, 577, 896, 962
FaqI	GGGAC	2 cut(s)	248, 581
FatI	CATG	6 cut(s)	36, 44, 547, 573, 892, 958
FbaI	TGATCA	1 cut(s)	766
Fnu4HI	GCNGC	1 cut(s)	482
FokI	GGATG	5 cut(s)	128, 148, 329, 623, 788
Fsp4HI	GCNGC	1 cut(s)	482
FspBI	CTAG	1 cut(s)	50
GlaI	GCGC	2 cut(s)	149, 760
GluI	GCNGC	1 cut(s)	482
GsaI	CCCAGC	1 cut(s)	735
GsuI	CTGGAG	1 cut(s)	278
HaeII	RGCGCY	2 cut(s)	151, 762
HaeIII	GGCC	3 cut(s)	60, 206, 447
HapII	CCGG	3 cut(s)	203, 485, 909
HhaI	GCGC	2 cut(s)	150, 761
Hin1I	GRCGYC	1 cut(s)	330
Hin1II	CATG	6 cut(s)	40, 48, 551, 577, 896, 962
Hin6I	GCGC	2 cut(s)	148, 759
HinP1I	GCGC	2 cut(s)	148, 759
HincII	GTYRAC	4 cut(s)	334, 473, 517, 934
HindII	GTYRAC	4 cut(s)	334, 473, 517, 934
HindIII	AAGCTT	1 cut(s)	23
HpaII	CCGG	3 cut(s)	203, 485, 909
HphI	GGTGA	3 cut(s)	101, 646, 868
Hpy166II	GTNNAC	8 cut(s)	237, 334, 406, 473, 517, 680, 701, 934
Hpy188I	TCNGA	9 cut(s)	21, 244, 328, 392, 457, 592, 600, 667, 864
Hpy188III	TCNNGA	5 cut(s)	77, 379, 653, 685, 869
Hpy8I	GTNNAC	8 cut(s)	237, 334, 406, 473, 517, 680, 701, 934
HpyAV	CCTTC	4 cut(s)	130, 206, 534, 948
HpyCH4III	ACNGT	4 cut(s)	499, 693, 698, 755
HpyCH4IV	ACGT	2 cut(s)	330, 745
HpyCH4V	TGCA	2 cut(s)	573, 880
HpyF10VI	GCNNNNNNNGC	2 cut(s)	199, 748
HpyF3I	CTNAG	8 cut(s)	94, 384, 456, 670, 683, 736, 852, 863
HpySE526I	ACGT	2 cut(s)	330, 745
Hsp92I	GRCGYC	1 cut(s)	330
Hsp92II	CATG	6 cut(s)	40, 48, 551, 577, 896, 962
HspAI	GCGC	2 cut(s)	148, 759
KroI	GCCGGC	1 cut(s)	202
KroNI	GCCGGC	1 cut(s)	204
Ksp22I	TGATCA	1 cut(s)	766
Kzo9I	GATC	1 cut(s)	766
LmnI	GCTCC	3 cut(s)	297, 549, 645
Lsp1109I	GCAGC	1 cut(s)	468
LweI	GCATC	2 cut(s)	601, 867
MaeI	CTAG	1 cut(s)	50
MaeII	ACGT	2 cut(s)	330, 745
MaeIII	GTNAC	4 cut(s)	107, 626, 634, 856
MalI	GATC	1 cut(s)	768
MboI	GATC	1 cut(s)	766
MboII	GAAGA	1 cut(s)	409
MhlI	GDGCHC	1 cut(s)	650
MlsI	TGGCCA	1 cut(s)	60
MluCI	AATT	1 cut(s)	252
MluNI	TGGCCA	1 cut(s)	60
MlyI	GAGTC	7 cut(s)	123, 242, 376, 384, 662, 853, 874
MmeI	TCCRAC	2 cut(s)	343, 690
Mox20I	TGGCCA	1 cut(s)	60
MroNI	GCCGGC	1 cut(s)	202
MscI	TGGCCA	1 cut(s)	60
MseI	TTAA	1 cut(s)	540
MslI	CAYNNNNRTG	2 cut(s)	35, 500
Msp20I	TGGCCA	1 cut(s)	60
MspA1I	CMGCKG	1 cut(s)	481
MspI	CCGG	3 cut(s)	203, 485, 909
MspR9I	CCNGG	1 cut(s)	910
MvnI	CGCG	3 cut(s)	380, 465, 608
MwoI	GCNNNNNNNGC	2 cut(s)	199, 748
NaeI	GCCGGC	1 cut(s)	204
NciI	CCSGG	1 cut(s)	910
NcoI	CCATGG	1 cut(s)	44
NdeII	GATC	1 cut(s)	766
NgoMIV	GCCGGC	1 cut(s)	202
NheI	GCTAGC	1 cut(s)	49
NlaIII	CATG	6 cut(s)	40, 48, 551, 577, 896, 962
NmuCI	GTSAC	3 cut(s)	107, 634, 856
NruI	TCGCGA	1 cut(s)	380
NspI	RCATGY	1 cut(s)	962
NspV	TTCGAA	1 cut(s)	660
OliI	CACNNNNGTG	1 cut(s)	500
PcsI	WCGNNNNNNNCGW	2 cut(s)	503, 702
PdiI	GCCGGC	1 cut(s)	204
PfeI	GAWTC	3 cut(s)	393, 616, 662
PflFI	GACNNNGTC	1 cut(s)	671
PflMI	CCANNNNNTGG	2 cut(s)	553, 950
PkrI	GCNGC	1 cut(s)	483
PleI	GAGTC	7 cut(s)	122, 241, 376, 383, 662, 853, 873
PpsI	GAGTC	7 cut(s)	122, 241, 376, 383, 662, 853, 873
PspEI	GGTNACC	2 cut(s)	107, 634
PspFI	CCCAGC	1 cut(s)	731
PspPI	GGNCC	1 cut(s)	446
PsyI	GACNNNGTC	1 cut(s)	671
PvuII	CAGCTG	1 cut(s)	481
RruI	TCGCGA	1 cut(s)	380
RsaI	GTAC	2 cut(s)	695, 850
RsaNI	GTAC	2 cut(s)	694, 849
RseI	CAYNNNNRTG	2 cut(s)	35, 500
SaqAI	TTAA	1 cut(s)	540
SatI	GCNGC	1 cut(s)	482
Sau3AI	GATC	1 cut(s)	766
Sau96I	GGNCC	1 cut(s)	446
SchI	GAGTC	7 cut(s)	123, 242, 376, 384, 662, 853, 874
ScrFI	CCNGG	1 cut(s)	910
SduI	GDGCHC	1 cut(s)	650
SfaNI	GCATC	2 cut(s)	601, 867
SfuI	TTCGAA	1 cut(s)	660
SmiMI	CAYNNNNRTG	2 cut(s)	35, 500
Sse9I	AATT	1 cut(s)	252
SsiI	CCGC	3 cut(s)	465, 608, 969
SspI	AATATT	1 cut(s)	623
SspMI	CTAG	1 cut(s)	50
StyD4I	CCNGG	1 cut(s)	908
StyI	CCWWGG	2 cut(s)	44, 442
TaaI	ACNGT	4 cut(s)	499, 693, 698, 755
TaiI	ACGT	2 cut(s)	333, 748
TaqI	TCGA	4 cut(s)	78, 189, 660, 807
TasI	AATT	1 cut(s)	252
TfiI	GAWTC	3 cut(s)	393, 616, 662
Tru1I	TTAA	1 cut(s)	540
Tru9I	TTAA	1 cut(s)	540
TscAI	CASTG	4 cut(s)	427, 569, 744, 834
TseFI	GTSAC	3 cut(s)	107, 634, 856
TseI	GCWGC	1 cut(s)	481
Tsp45I	GTSAC	3 cut(s)	107, 634, 856
TspDTI	ATGAA	3 cut(s)	112, 175, 343
TspRI	CASTG	4 cut(s)	427, 569, 744, 834
Tth111I	GACNNNGTC	1 cut(s)	671
Van91I	CCANNNNNTGG	2 cut(s)	553, 950
XceI	RCATGY	1 cut(s)	962
XspI	CTAG	1 cut(s)	50
ZraI	GACGTC	1 cut(s)	331

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.