Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0003530

Physical Location & Seq

Genomic Coordinates Forward (+)

4584131 .. 4586360

Gene Structure 2230 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g06610.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1905 bp

ATGTTAATTGATCTCTCACACTATAAGCAATCCAATAATTTAAGTATCTCCTATCATACACAATTCATCCAACACATGGAGAGCAAAGATCAGAAGAAACTTCACATAGCCATGTTCCCATGGCTAGCCTACGGCCACCTAATGTCATTTCTGGAGGTCTCCAAGTTCTTAGCTCAAAAGGGTCACCAAATCTCCTTCATCTCCACCCCCAAAAACATCAATCGCCACCGATCCTCCTCCTTTTCCCCGCTCATCGATTTCGTCGAGCTTCCACTCCCCGCCGTCGACGGCTTACCGGAATCCGCCGAGTCCACCTCCGAGCTACCAATCAACAAAGTACCTTACCTCAAAAAAGCCTACGACTTGCTCAAGCCTTCAGTCACGCATTTCATCCAACACTCGGGTGTCAACTGGGTCGTCCATGACTTCATTTGCTACTGGATGCCCAGAGTCGCCACTCAGCTGGGAGTCAACTCGGTCTTCTTCAGCGTCACCAACGCCACTACCTTGGCCTTCTTCGGTCCTCCATCCGAGTTACTCAGCGACAAACCCCGGCGGCCGGAGGACTTGACGGTCGTCCCCGAGTGGGTCGACTATCCTTCCAACGTTGCCTTTAAGCTGCATGAGATGGCTAGCTACTGGGATTGCATGGACGACGAGGTCTCTGACTTTCAGAGAGCCGCGGGTGCGATTCAAGATTGTAATTTTGTGACTATGCGGAGCTGCACTGAGTTTGAATCTGACGCGGTGAGTCTGCTCAGGAAGATGTACGGCAAACCCATTGTTCCACTAGGGCTGCTGCCGCCCAACTCAGCACCGCATCAGCATGGCGTCGCTGACGATCGAAGGGATGAGAAGTGGGAATTGTTGAGAGAGTGGCTCGAAAATAAGAAACCGAACTCGGTGGTTTACATCGCATTCGGCACTGAGGTGACTCCTAGCCAAGAGTTGATGCACGAGTTGGCAGATGGGATAGAGAAATCCGGGTTGCCCTTTATTTGGGTGGTCAACAATCGCCCGTTGGTGGAGGGTGTGTTGGGGGCCGATATCATTCCACTCGGGTTTCAAACTCGAGTGGAGATCGATCGAGGCTTGGTCTGGAGGGATTGGGCCCCACAACTTAAGATTCTAGGTCATGCATCGGTCGGAGGTTTCCTAACTCACTGCGGTTGGAGTTCAGTTGTTGAGGCACTACGGTTTGGGCGGGTTCTGATTTTATTTTCAGGTGCTTATTCAGACCAACCGTTGAACGCGAGACTAATGCACGATAAGCGGGTCGGGTTGGAGATACCGAGGGACGAGCGAGACGGATCGTTTACGAGTGACTCGGTGGCCGAGTTGATTAGGCGAGTGATGGTGGAGAAAGAAGGTGAGTCAATAAGGTCAAATGCATGGGCCATGAAGGAGATCTTTGGCAACGTAGAGTTGAACAACAAGTGCTTGGATGAGTTCACTCGGGTCCTTGAAACCTGGCCGACTTTCACTTATATTATAATACAAATGGTTGAATTTGGTGCACCAGACTTTATTCCTAGCATACTGAAAATCTCTCATAATCAGCTTTGTAGATTTCATGTGTTGGTTTTGGTTTTATTTTTTTCTAACCTATTAAGAAAAGATCGTGTAATATTTTGTATAATATGTTTTCCTAAAAGTAGCTGTAGGCTGAATAGTTTTTCGTGTATTATTGCCAAAGTAGAAGTACAATATATATATACACAACCAAATATATTGTACTTCTACTTTGGCAATAATACACGAAAAACTATTCAGCCTACCTGCAATTTACCATTCATTCTTTTAATATACCCACACCAAATCATTAATGTTATTCTTACCATATTAATATACCACATTAGTATAGCATATTATATGGCATCTGATGTGACTGTCCACATCATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0080043 GO:0080044

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGT

Protein Analysis

635

Amino Acids

72.47

Weight (kDa)

6.27

Isoelectric Point (pI)

43.07

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003530)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G65550
fragaria_vesca	FvH4_1g07960 FvH4_1g07960
malus_domestica	MD02G1083100.v1.1 MD02G1083300.v1.1 MD02G1083600.v1.1 MD02G1083800.v1.1 MD02G1084000.v1.1 MD10G1101200.v1.1 MD15G1211400.v1.1
prunus_persica	Prupe.7G205500_v2.0.a1 Prupe.I002600_v2.0.a1
pyrus_communis	pycom02g06610 pycom02g06630 pycom02g06640 pycom15g18790
rosa_chinensis	RchiOBHm_Chr2g0093841 RchiOBHm_Chr2g0093861
rosa_laevigata	RLG00000013086 RLG00000016441
rosa_multiflora	Rmu_co8040598.1_g000001 Rmu_sc0003027.1_g000010 Rmu_sc0003027.1_g000014 Rmu_sc0017523.1_g000004 Rmu_sc0017523.1_g000009
rosa_roxburghii	Rroxscaffold_2G00147710 Rroxscaffold_2G00147760
rosa_rugosa	Rorug02G0040100 Rorug02G0040100
rosa_samantha	Rh2BG087200 Rh2BG087400 Rh2CG089600 Rh2CG089800 Rh2DG085300 Rh2DG085500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1493
AasI	GACNNNNNNGTC	2 cut(s)	572, 659
Acc36I	ACCTGC	1 cut(s)	1787
AccB7I	CCANNNNNTGG	1 cut(s)	76
AccBSI	CCGCTC	1 cut(s)	250
AccI	GTMKAC	2 cut(s)	285, 591
AccII	CGCG	3 cut(s)	683, 746, 1253
AclI	AACGTT	1 cut(s)	606
AclWI	GGATC	2 cut(s)	225, 1318
AcoI	YGGCCR	4 cut(s)	133, 557, 1332, 1472
AcsI	RAATTY	1 cut(s)	1508
AcuI	CTGAAG	2 cut(s)	360, 469
AcyI	GRCGYC	1 cut(s)	831
AfaI	GTAC	4 cut(s)	339, 770, 1704, 1736
AfiI	CCNNNNNNNGG	6 cut(s)	76, 400, 559, 586, 999, 1024
AflII	CTTAAG	1 cut(s)	1121
AgsI	TTSAA	7 cut(s)	695, 737, 1067, 1249, 1429, 1466, 1508
AjnI	CCWGG	1 cut(s)	1469
AleI	CACNNNNGTG	2 cut(s)	402, 929
AluBI	AGCT	9 cut(s)	173, 268, 322, 463, 619, 636, 723, 1561, 1659
AluI	AGCT	9 cut(s)	173, 268, 322, 463, 619, 636, 723, 1561, 1659
Alw21I	GWGCWC	1 cut(s)	1519
Alw26I	GTCTC	4 cut(s)	163, 667, 1249, 1299
Alw44I	GTGCAC	1 cut(s)	1515
AlwI	GGATC	2 cut(s)	225, 1318
Ama87I	CYCGRG	5 cut(s)	400, 581, 1058, 1071, 1455
AoxI	GGCC	8 cut(s)	133, 510, 557, 1041, 1110, 1332, 1395, 1472
ApaI	GGGCCC	1 cut(s)	1114
ApaLI	GTGCAC	1 cut(s)	1515
ApeKI	GCWGC	4 cut(s)	619, 723, 796, 799
ApoI	RAATTY	1 cut(s)	1508
AseI	ATTAAT	2 cut(s)	1824, 1844
AspS9I	GGNCC	6 cut(s)	521, 1041, 1110, 1111, 1395, 1459
AsuC2I	CCSGG	2 cut(s)	553, 985
AsuHPI	GGTGA	5 cut(s)	176, 484, 760, 943, 1382
AsuNHI	GCTAGC	2 cut(s)	124, 632
AvaI	CYCGRG	5 cut(s)	400, 581, 1058, 1071, 1455
AvaII	GGWCC	2 cut(s)	521, 1459
BaeGI	GKGCMC	2 cut(s)	1114, 1519
BanII	GRGCYC	1 cut(s)	1114
BauI	CACGAG	1 cut(s)	956
BbsI	GAAGAC	1 cut(s)	472
Bbv12I	GWGCWC	1 cut(s)	1519
BbvI	GCAGC	4 cut(s)	606, 710, 783, 786
BccI	CCATC	4 cut(s)	535, 622, 962, 1348
BceAI	ACGGC	4 cut(s)	148, 266, 304, 787
BcgI	CGANNNNNNTGC	2 cut(s)	1243, 1277
BciT130I	CCWGG	1 cut(s)	1471
BcnI	CCSGG	2 cut(s)	553, 985
BcoDI	GTCTC	4 cut(s)	163, 667, 1249, 1299
BfaI	CTAG	6 cut(s)	125, 633, 791, 939, 1130, 1533
BfmI	CTRYAG	1 cut(s)	1660
BfrI	CTTAAG	1 cut(s)	1121
BfuAI	ACCTGC	1 cut(s)	1787
BglII	AGATCT	1 cut(s)	1407
BisI	GCNGC	7 cut(s)	557, 620, 681, 724, 797, 800, 803
BlsI	GCNGC	7 cut(s)	558, 621, 682, 725, 798, 801, 804
Bme1390I	CCNGG	3 cut(s)	553, 985, 1471
Bme18I	GGWCC	2 cut(s)	521, 1459
BmeT110I	CYCGRG	5 cut(s)	400, 581, 1058, 1071, 1455
BmgT120I	GGNCC	6 cut(s)	521, 1041, 1110, 1111, 1395, 1459
BmiI	GGNNCC	4 cut(s)	1042, 1112, 1113, 1460
BmrFI	CCNGG	3 cut(s)	553, 985, 1471
BmrI	ACTGGG	2 cut(s)	421, 649
BmsI	GCATC	5 cut(s)	432, 829, 942, 1148, 1886
BmtI	GCTAGC	2 cut(s)	128, 636
BmuI	ACTGGG	2 cut(s)	421, 649
BoxI	GACNNNNGTC	1 cut(s)	575
BpiI	GAAGAC	1 cut(s)	472
BplI	GAGNNNNNCTC	4 cut(s)	299, 331, 864, 896
BpmI	CTGGAG	2 cut(s)	173, 1120
Bpu10I	CCTNAGC	1 cut(s)	758
BpuEI	CTTGAG	1 cut(s)	353
BpuMI	CCSGG	2 cut(s)	553, 985
Bsa29I	ATCGAT	2 cut(s)	255, 1083
BsaHI	GRCGYC	1 cut(s)	831
BsaI	GGTCTC	2 cut(s)	163, 667
BsaJI	CCNNGG	5 cut(s)	119, 507, 551, 681, 1292
BsaWI	WCCGGW	1 cut(s)	295
BsaXI	ACNNNNNCTCC	6 cut(s)	176, 206, 218, 248, 1019, 1049
Bsc4I	CCNNNNNNNGG	6 cut(s)	76, 400, 559, 586, 999, 1024
Bse1I	ACTGG	3 cut(s)	416, 443, 644
BseBI	CCWGG	1 cut(s)	1471
BseCI	ATCGAT	2 cut(s)	255, 1083
BseDI	CCNNGG	5 cut(s)	119, 507, 551, 681, 1292
BseGI	GGATG	6 cut(s)	66, 390, 447, 527, 856, 1450
BseLI	CCNNNNNNNGG	6 cut(s)	76, 400, 559, 586, 999, 1024
BseMII	CTCAG	6 cut(s)	473, 553, 720, 772, 825, 918
BseNI	ACTGG	3 cut(s)	416, 443, 644
BseRI	GAGGAG	1 cut(s)	226
BseSI	GKGCMC	2 cut(s)	1114, 1519
BseX3I	CGGCCG	1 cut(s)	557
BseXI	GCAGC	4 cut(s)	606, 710, 783, 786
BseYI	CCCAGC	1 cut(s)	463
BsgI	GTGCAG	1 cut(s)	709
Bsh1236I	CGCG	3 cut(s)	683, 746, 1253
Bsh1285I	CGRYCG	5 cut(s)	560, 576, 844, 1087, 1146
BshFI	GGCC	8 cut(s)	135, 512, 559, 1043, 1112, 1334, 1397, 1474
BshVI	ATCGAT	2 cut(s)	255, 1083
BsiEI	CGRYCG	5 cut(s)	560, 576, 844, 1087, 1146
BsiHKAI	GWGCWC	1 cut(s)	1519
BsiHKCI	CYCGRG	5 cut(s)	400, 581, 1058, 1071, 1455
BsiSI	CCGG	4 cut(s)	296, 553, 560, 984
BslFI	GGGAC	2 cut(s)	563, 1310
BslI	CCNNNNNNNGG	6 cut(s)	76, 400, 559, 586, 999, 1024
BsmAI	GTCTC	4 cut(s)	163, 667, 1249, 1299
BsmBI	CGTCTC	1 cut(s)	1299
BsmFI	GGGAC	2 cut(s)	563, 1310
BsmI	GAATGC	1 cut(s)	917
BsnI	GGCC	8 cut(s)	135, 512, 559, 1043, 1112, 1334, 1397, 1474
Bso31I	GGTCTC	2 cut(s)	163, 667
BsoBI	CYCGRG	5 cut(s)	400, 581, 1058, 1071, 1455
Bsp120I	GGGCCC	1 cut(s)	1110
Bsp1286I	GDGCHC	2 cut(s)	1114, 1519
Bsp143I	GATC	9 cut(s)	10, 88, 230, 841, 1080, 1084, 1310, 1407, 1618
Bsp19I	CCATGG	1 cut(s)	119
BspANI	GGCC	8 cut(s)	135, 512, 559, 1043, 1112, 1334, 1397, 1474
BspCNI	CTCAG	6 cut(s)	472, 552, 721, 771, 824, 919
BspDI	ATCGAT	2 cut(s)	255, 1083
BspFNI	CGCG	3 cut(s)	683, 746, 1253
BspLI	GGNNCC	4 cut(s)	1042, 1112, 1113, 1460
BspMI	ACCTGC	1 cut(s)	1787
BspOI	GCTAGC	2 cut(s)	128, 636
BspPI	GGATC	2 cut(s)	225, 1318
BspTI	CTTAAG	1 cut(s)	1121
BspTNI	GGTCTC	2 cut(s)	163, 667
BsrBI	CCGCTC	1 cut(s)	250
BsrI	ACTGG	3 cut(s)	416, 443, 644
BssECI	CCNNGG	5 cut(s)	119, 507, 551, 681, 1292
BssMI	GATC	9 cut(s)	10, 88, 230, 841, 1080, 1084, 1310, 1407, 1618
BssNI	GRCGYC	1 cut(s)	831
BssSI	CACGAG	1 cut(s)	956
BssT1I	CCWWGG	2 cut(s)	119, 507
Bst2BI	CACGAG	1 cut(s)	956
Bst2UI	CCWGG	1 cut(s)	1471
Bst4CI	ACNGT	4 cut(s)	574, 1197, 1245, 1891
BstACI	GRCGYC	1 cut(s)	831
BstAFI	CTTAAG	1 cut(s)	1121
BstC8I	GCNNGC	2 cut(s)	126, 634
BstDEI	CTNAG	7 cut(s)	169, 459, 539, 729, 758, 811, 927
BstDSI	CCRYGG	2 cut(s)	119, 681
BstEII	GGTNACC	1 cut(s)	182
BstF5I	GGATG	6 cut(s)	66, 390, 447, 527, 856, 1450
BstFNI	CGCG	3 cut(s)	683, 746, 1253
BstKTI	GATC	9 cut(s)	13, 91, 233, 844, 1083, 1087, 1313, 1410, 1621
BstMAI	GTCTC	4 cut(s)	163, 667, 1249, 1299
BstMBI	GATC	9 cut(s)	10, 88, 230, 841, 1080, 1084, 1310, 1407, 1618
BstMCI	CGRYCG	5 cut(s)	560, 576, 844, 1087, 1146
BstMWI	GCNNNNNNNGC	3 cut(s)	686, 802, 1270
BstNI	CCWGG	1 cut(s)	1471
BstPAI	GACNNNNGTC	1 cut(s)	575
BstPI	GGTNACC	1 cut(s)	182
BstSCI	CCNGG	3 cut(s)	551, 983, 1469
BstSFI	CTRYAG	1 cut(s)	1660
BstSLI	GKGCMC	2 cut(s)	1114, 1519
BstUI	CGCG	3 cut(s)	683, 746, 1253
BstV1I	GCAGC	4 cut(s)	606, 710, 783, 786
BstV2I	GAAGAC	1 cut(s)	472
BstX2I	RGATCY	1 cut(s)	1407
BstXI	CCANNNNNNTGG	2 cut(s)	463, 508
BstYI	RGATCY	1 cut(s)	1407
BstZI	CGGCCG	1 cut(s)	557
Bsu15I	ATCGAT	2 cut(s)	255, 1083
BsuRI	GGCC	8 cut(s)	135, 512, 559, 1043, 1112, 1334, 1397, 1474
BsuTUI	ATCGAT	2 cut(s)	255, 1083
BtgI	CCRYGG	2 cut(s)	119, 681
BtgZI	GCGATG	1 cut(s)	898
BtsCI	GGATG	6 cut(s)	66, 390, 447, 527, 856, 1450
BtsI	GCAGTG	1 cut(s)	1162
BtsIMutI	CAGTG	3 cut(s)	726, 924, 1162
BveI	ACCTGC	1 cut(s)	1787
Cac8I	GCNNGC	2 cut(s)	126, 634
Cfr13I	GGNCC	6 cut(s)	521, 1041, 1110, 1111, 1395, 1459
Cfr42I	CCGCGG	1 cut(s)	684
ClaI	ATCGAT	2 cut(s)	255, 1083
CseI	GACGC	3 cut(s)	478, 752, 820
Csp6I	GTAC	4 cut(s)	338, 769, 1703, 1735
CviQI	GTAC	4 cut(s)	338, 769, 1703, 1735
DdeI	CTNAG	7 cut(s)	169, 459, 539, 729, 758, 811, 927
DpnI	GATC	9 cut(s)	12, 90, 232, 843, 1082, 1086, 1312, 1409, 1620
DpnII	GATC	9 cut(s)	10, 88, 230, 841, 1080, 1084, 1310, 1407, 1618
DrdI	GACNNNNNNGTC	2 cut(s)	572, 659
DseDI	GACNNNNNNGTC	2 cut(s)	572, 659
EaeI	YGGCCR	4 cut(s)	133, 557, 1332, 1472
EagI	CGGCCG	1 cut(s)	557
EciI	GGCGGA	1 cut(s)	292
EclXI	CGGCCG	1 cut(s)	557
Eco130I	CCWWGG	2 cut(s)	119, 507
Eco24I	GRGCYC	1 cut(s)	1114
Eco31I	GGTCTC	2 cut(s)	163, 667
Eco32I	GATATC	1 cut(s)	1048
Eco47I	GGWCC	2 cut(s)	521, 1459
Eco52I	CGGCCG	1 cut(s)	557
Eco57I	CTGAAG	2 cut(s)	360, 469
Eco88I	CYCGRG	5 cut(s)	400, 581, 1058, 1071, 1455
Eco91I	GGTNACC	1 cut(s)	182
EcoO109I	RGGNCCY	2 cut(s)	1111, 1459
EcoO65I	GGTNACC	1 cut(s)	182
EcoRII	CCWGG	1 cut(s)	1469
EcoRV	GATATC	1 cut(s)	1048
EcoT14I	CCWWGG	2 cut(s)	119, 507
EcoT22I	ATGCAT	2 cut(s)	1141, 1393
EcoT38I	GRGCYC	1 cut(s)	1114
ErhI	CCWWGG	2 cut(s)	119, 507
Esp3I	CGTCTC	1 cut(s)	1299
FalI	AAGNNNNNCTT	2 cut(s)	1394, 1426
FaqI	GGGAC	2 cut(s)	563, 1310
FauI	CCCGC	5 cut(s)	255, 286, 676, 1197, 1266
FblI	GTMKAC	2 cut(s)	285, 591
Fnu4HI	GCNGC	7 cut(s)	557, 620, 681, 724, 797, 800, 803
FokI	GGATG	6 cut(s)	53, 377, 454, 514, 863, 1457
FriOI	GRGCYC	1 cut(s)	1114
Fsp4HI	GCNGC	7 cut(s)	557, 620, 681, 724, 797, 800, 803
FspBI	CTAG	6 cut(s)	125, 633, 791, 939, 1130, 1533
GluI	GCNGC	7 cut(s)	557, 620, 681, 724, 797, 800, 803
GsaI	CCCAGC	1 cut(s)	467
GsuI	CTGGAG	2 cut(s)	173, 1120
HaeIII	GGCC	8 cut(s)	135, 512, 559, 1043, 1112, 1334, 1397, 1474
HapII	CCGG	4 cut(s)	296, 553, 560, 984
HgaI	GACGC	3 cut(s)	478, 752, 820
Hin1I	GRCGYC	1 cut(s)	831
HincII	GTYRAC	5 cut(s)	286, 409, 472, 592, 1009
HindII	GTYRAC	5 cut(s)	286, 409, 472, 592, 1009
HpaII	CCGG	4 cut(s)	296, 553, 560, 984
HphI	GGTGA	5 cut(s)	176, 484, 760, 943, 1382
Hpy188III	TCNNGA	4 cut(s)	152, 695, 760, 1099
Hpy99I	CGWCG	5 cut(s)	266, 287, 290, 659, 836
HpyAV	CCTTC	7 cut(s)	205, 384, 523, 609, 840, 1361, 1396
HpyCH4III	ACNGT	4 cut(s)	574, 1197, 1245, 1891
HpyCH4IV	ACGT	2 cut(s)	606, 1419
HpyCH4V	TGCA	9 cut(s)	622, 648, 726, 955, 1139, 1264, 1391, 1517, 1782
HpyF10VI	GCNNNNNNNGC	3 cut(s)	686, 802, 1270
HpyF3I	CTNAG	7 cut(s)	169, 459, 539, 729, 758, 811, 927
HpySE526I	ACGT	2 cut(s)	606, 1419
Hsp92I	GRCGYC	1 cut(s)	831
KspI	CCGCGG	1 cut(s)	684
Kzo9I	GATC	9 cut(s)	10, 88, 230, 841, 1080, 1084, 1310, 1407, 1618
LmnI	GCTCC	1 cut(s)	720
Lsp1109I	GCAGC	4 cut(s)	606, 710, 783, 786
LweI	GCATC	5 cut(s)	432, 829, 942, 1148, 1886
MaeI	CTAG	6 cut(s)	125, 633, 791, 939, 1130, 1533
MaeII	ACGT	2 cut(s)	606, 1419
MaeIII	GTNAC	8 cut(s)	182, 379, 490, 534, 709, 931, 1322, 1885
MalI	GATC	9 cut(s)	12, 90, 232, 843, 1082, 1086, 1312, 1409, 1620
MbiI	CCGCTC	1 cut(s)	250
MboI	GATC	9 cut(s)	10, 88, 230, 841, 1080, 1084, 1310, 1407, 1618
MboII	GAAGA	5 cut(s)	106, 472, 475, 508, 775
MflI	RGATCY	1 cut(s)	1407
MhlI	GDGCHC	2 cut(s)	1114, 1519
MluCI	AATT	7 cut(s)	6, 37, 62, 703, 863, 1508, 1783
MlyI	GAGTC	7 cut(s)	317, 459, 477, 760, 928, 1319, 1382
MmeI	TCCRAC	6 cut(s)	94, 418, 627, 1126, 1151, 1263
Mph1103I	ATGCAT	2 cut(s)	1141, 1393
MseI	TTAA	8 cut(s)	5, 41, 615, 1122, 1610, 1802, 1824, 1844
MslI	CAYNNNNRTG	4 cut(s)	110, 402, 825, 929
MspA1I	CMGCKG	2 cut(s)	463, 683
MspCI	CTTAAG	1 cut(s)	1121
MspI	CCGG	4 cut(s)	296, 553, 560, 984
MspR9I	CCNGG	3 cut(s)	553, 985, 1471
Mva1269I	GAATGC	1 cut(s)	917
MvaI	CCWGG	1 cut(s)	1471
MvnI	CGCG	3 cut(s)	683, 746, 1253
MwoI	GCNNNNNNNGC	3 cut(s)	686, 802, 1270
NciI	CCSGG	2 cut(s)	553, 985
NcoI	CCATGG	1 cut(s)	119
NdeII	GATC	9 cut(s)	10, 88, 230, 841, 1080, 1084, 1310, 1407, 1618
NheI	GCTAGC	2 cut(s)	124, 632
NlaIV	GGNNCC	4 cut(s)	1042, 1112, 1113, 1460
NmeAIII	GCCGAG	2 cut(s)	331, 1360
NmuCI	GTSAC	7 cut(s)	182, 379, 490, 709, 931, 1322, 1885
NsiI	ATGCAT	2 cut(s)	1141, 1393
OliI	CACNNNNGTG	2 cut(s)	402, 929
PaeR7I	CTCGAG	1 cut(s)	1071
PcsI	WCGNNNNNNNCGW	1 cut(s)	261
PctI	GAATGC	1 cut(s)	917
PfeI	GAWTC	4 cut(s)	299, 691, 737, 1126
PflFI	GACNNNGTC	1 cut(s)	659
PflMI	CCANNNNNTGG	1 cut(s)	76
PkrI	GCNGC	7 cut(s)	558, 621, 682, 725, 798, 801, 804
Ple19I	CGATCG	2 cut(s)	844, 1087
PleI	GAGTC	7 cut(s)	316, 458, 476, 759, 928, 1319, 1381
PpsI	GAGTC	7 cut(s)	316, 458, 476, 759, 928, 1319, 1381
PpuMI	RGGWCCY	1 cut(s)	1459
PshAI	GACNNNNGTC	1 cut(s)	575
PshBI	ATTAAT	2 cut(s)	1824, 1844
PsiI	TTATAA	1 cut(s)	1493
Psp1406I	AACGTT	1 cut(s)	606
Psp5II	RGGWCCY	1 cut(s)	1459
Psp6I	CCWGG	1 cut(s)	1469
PspEI	GGTNACC	1 cut(s)	182
PspFI	CCCAGC	1 cut(s)	463
PspGI	CCWGG	1 cut(s)	1469
PspN4I	GGNNCC	4 cut(s)	1042, 1112, 1113, 1460
PspOMI	GGGCCC	1 cut(s)	1110
PspPI	GGNCC	6 cut(s)	521, 1041, 1110, 1111, 1395, 1459
PspPPI	RGGWCCY	1 cut(s)	1459
PspXI	VCTCGAGB	1 cut(s)	1071
PsuI	RGATCY	1 cut(s)	1407
PsyI	GACNNNGTC	1 cut(s)	659
PvuI	CGATCG	2 cut(s)	844, 1087
PvuII	CAGCTG	1 cut(s)	463
RsaI	GTAC	4 cut(s)	339, 770, 1704, 1736
RsaNI	GTAC	4 cut(s)	338, 769, 1703, 1735
RseI	CAYNNNNRTG	4 cut(s)	110, 402, 825, 929
SacII	CCGCGG	1 cut(s)	684
SalI	GTCGAC	2 cut(s)	284, 590
SaqAI	TTAA	8 cut(s)	5, 41, 615, 1122, 1610, 1802, 1824, 1844
SatI	GCNGC	7 cut(s)	557, 620, 681, 724, 797, 800, 803
Sau3AI	GATC	9 cut(s)	10, 88, 230, 841, 1080, 1084, 1310, 1407, 1618
Sau96I	GGNCC	6 cut(s)	521, 1041, 1110, 1111, 1395, 1459
SchI	GAGTC	7 cut(s)	317, 459, 477, 760, 928, 1319, 1382
ScrFI	CCNGG	3 cut(s)	553, 985, 1471
SduI	GDGCHC	2 cut(s)	1114, 1519
SfaNI	GCATC	5 cut(s)	432, 829, 942, 1148, 1886
SfcI	CTRYAG	1 cut(s)	1660
Sfr274I	CTCGAG	1 cut(s)	1071
Sfr303I	CCGCGG	1 cut(s)	684
SgrBI	CCGCGG	1 cut(s)	684
SgrDI	CGTCGACG	1 cut(s)	284
SinI	GGWCC	2 cut(s)	521, 1459
SlaI	CTCGAG	1 cut(s)	1071
SmiMI	CAYNNNNRTG	4 cut(s)	110, 402, 825, 929
SmlI	CTYRAG	3 cut(s)	368, 1071, 1121
SmoI	CTYRAG	3 cut(s)	368, 1071, 1121
Sse9I	AATT	7 cut(s)	6, 37, 62, 703, 863, 1508, 1783
SspI	AATATT	1 cut(s)	1629
SspMI	CTAG	6 cut(s)	125, 633, 791, 939, 1130, 1533
StyD4I	CCNGG	3 cut(s)	551, 983, 1469
StyI	CCWWGG	2 cut(s)	119, 507
TaaI	ACNGT	4 cut(s)	574, 1197, 1245, 1891
TaiI	ACGT	2 cut(s)	609, 1422
TaqI	TCGA	9 cut(s)	255, 264, 285, 591, 844, 882, 1072, 1083, 1087
TaqII	GACCGA	3 cut(s)	466, 509, 1132
TasI	AATT	7 cut(s)	6, 37, 62, 703, 863, 1508, 1783
TatI	WGTACW	2 cut(s)	1702, 1734
TauI	GCSGC	3 cut(s)	559, 683, 805
TfiI	GAWTC	4 cut(s)	299, 691, 737, 1126
Tru1I	TTAA	8 cut(s)	5, 41, 615, 1122, 1610, 1802, 1824, 1844
Tru9I	TTAA	8 cut(s)	5, 41, 615, 1122, 1610, 1802, 1824, 1844
TscAI	CASTG	3 cut(s)	733, 931, 1169
TseFI	GTSAC	7 cut(s)	182, 379, 490, 709, 931, 1322, 1885
TseI	GCWGC	4 cut(s)	619, 723, 796, 799
Tsp45I	GTSAC	7 cut(s)	182, 379, 490, 709, 931, 1322, 1885
TspDTI	ATGAA	7 cut(s)	55, 187, 379, 418, 1415, 1562, 1783
TspGWI	ACGGA	1 cut(s)	1323
TspRI	CASTG	3 cut(s)	733, 931, 1169
Tth111I	GACNNNGTC	1 cut(s)	659
Van91I	CCANNNNNTGG	1 cut(s)	76
Vha464I	CTTAAG	1 cut(s)	1121
VneI	GTGCAC	1 cut(s)	1515
VpaK11BI	GGWCC	2 cut(s)	521, 1459
VspI	ATTAAT	2 cut(s)	1824, 1844
XapI	RAATTY	1 cut(s)	1508
XhoI	CTCGAG	1 cut(s)	1071
XmiI	GTMKAC	2 cut(s)	285, 591
XspI	CTAG	6 cut(s)	125, 633, 791, 939, 1130, 1533
Zsp2I	ATGCAT	2 cut(s)	1141, 1393

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.