AT5G66570

oxygen-evolving enhancer protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
26568572 .. 26570461
1890 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G66570.1

Sequence Viewer

Length: 999 bp
ATGGCAGCCTCTCTCCAATCCACCGCTACATTCCTCCAGTCGGCGAAGATCGCCACCGCTCCTTCTCGCGGAAGTTCTCACCTCCGATCGACTCAAGCCGTCGGCAAATCTTTTGGGCTCGAAACTTCCTCGGCTCGCCTCACTTGCTCCTTCCAGTCTGACTTTAAGGACTTCACCGGTAAATGCTCCGACGCTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAGAGCAAGACATACATGGAAGTGAAAGGAACTGGAACGGCTAACCAGTGCCCTACTATTGACGGTGGCTCTGAGACTTTCTCGTTCAAACCCGGAAAGTATGCAGGAAAGAAGTTCTGCTTCGAGCCTACTTCCTTCACCGTCAAGGCAGACAGTGTAAGCAAGAACGCTCCTCCAGAGTTCCAGAACACAAAGCTCATGACCCGTCTTACCTACACCCTTGACGAGATCGAAGGACCCTTCGAGGTTGCTTCAGACGGAAGCGTCAATTTCAAGGAAGAAGATGGAATCGACTATGCTGCAGTCACAGTCCAACTTCCAGGAGGTGAACGTGTGCCATTCCTTTTCACAGTCAAACAGCTTGACGCCTCAGGCAAACCAGACAGCTTCACCGGAAAATTCTTGGTTCCATCGTACCGTGGCTCTTCCTTCTTGGACCCAAAGGGCCGTGGTGGATCCACAGGATATGACAACGCCGTGGCATTGCCAGCTGGAGGCAGAGGAGACGAGGAGGAGCTTGTAAAGGAGAACGTGAAGAACACTGCCGCTTCAGTGGGAGAGATCACTCTGAAAGTGACAAAGAGCAAGCCGGAGACAGGAGAGGTGATCGGAGTGTTCGAGAGTCTTCAGCCGTCGGATACTGACTTGGGTGCTAAGGTACCAAAGGATGTGAAGATCCAAGGGGTGTGGTATGGTCAACTTGAGTGA

Protein Analysis

332

Amino Acids

35.14

Weight (kDa)

5.55

Isoelectric Point (pI)

34.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MSP PF01716 99 - 331 1.6e-96 Manganese-stabilising protein / photosystem II polypeptide
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013223)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G50820 AT5G66570
fragaria_vesca FvH4_1g14430
malus_domestica MD02G1157800.v1.1 MD15G1272500.v1.1
prunus_persica Prupe.7G145900_v2.0.a1
pyrus_communis pycom02g12470 pycom15g23610
rosa_chinensis RchiOBHm_Chr2g0103161
rosa_laevigata RLG00000017214
rosa_multiflora Rmu_sc0000388.1_g000004
rosa_roxburghii Rroxscaffold_2G00139880
rosa_rugosa Rorug02G0112200
rosa_samantha Rh2AG161000 Rh2BG167700 Rh2CG168000 Rh2DG166600
rosa_wichuraiana Rw2G012630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 554
Acc65I GGTACC 1 cut(s) 949
AccB1I GGYRCC 1 cut(s) 949
AccBSI CCGCTC 1 cut(s) 59
AccII CGCG 1 cut(s) 69
AciI CCGC 5 cut(s) 24, 57, 69, 254, 837
AclWI GGATC 3 cut(s) 741, 754, 961
AcsI RAATTY 1 cut(s) 689
AcuI CTGAAG 3 cut(s) 528, 825, 902
AcyI GRCGYC 1 cut(s) 657
AfaI GTAC 2 cut(s) 707, 951
AfiI CCNNNNNNNGG 4 cut(s) 40, 68, 785, 887
AflIII ACRYGT 1 cut(s) 622
AgeI ACCGGT 1 cut(s) 176
AgsI TTSAA 2 cut(s) 379, 565
AjnI CCWGG 1 cut(s) 610
AluBI AGCT 6 cut(s) 263, 487, 652, 678, 782, 808
AluI AGCT 6 cut(s) 263, 487, 652, 678, 782, 808
Alw21I GWGCWC 1 cut(s) 265
Alw26I GTCTC 4 cut(s) 244, 359, 789, 878
AlwI GGATC 3 cut(s) 741, 754, 961
Ama87I CYCGRG 1 cut(s) 241
AoxI GGCC 1 cut(s) 736
ApeKI GCWGC 2 cut(s) 5, 590
ApoI RAATTY 1 cut(s) 689
AsiGI ACCGGT 1 cut(s) 176
Asp718I GGTACC 1 cut(s) 949
AspS9I GGNCC 3 cut(s) 527, 727, 736
AsuC2I CCSGG 1 cut(s) 384
AsuHPI GGTGA 6 cut(s) 71, 166, 421, 629, 673, 907
AvaI CYCGRG 1 cut(s) 241
AvaII GGWCC 2 cut(s) 527, 727
AxyI CCTNAGG 1 cut(s) 661
BaeGI GKGCMC 1 cut(s) 344
BamHI GGATCC 1 cut(s) 746
BanI GGYRCC 1 cut(s) 949
BanII GRGCYC 2 cut(s) 120, 265
BbsI GAAGAC 1 cut(s) 908
Bbv12I GWGCWC 1 cut(s) 265
BbvI GCAGC 2 cut(s) 17, 577
BccI CCATC 2 cut(s) 569, 709
BceAI ACGGC 5 cut(s) 83, 345, 723, 752, 907
BcgI CGANNNNNNTGC 2 cut(s) 572, 606
BciT130I CCWGG 1 cut(s) 612
BciVI GTATCC 1 cut(s) 922
BcnI CCSGG 1 cut(s) 384
BcoDI GTCTC 4 cut(s) 244, 359, 789, 878
BfmI CTRYAG 1 cut(s) 591
BfuI GTATCC 1 cut(s) 922
BisI GCNGC 3 cut(s) 6, 591, 837
BlsI GCNGC 3 cut(s) 7, 592, 838
Bme1390I CCNGG 2 cut(s) 384, 612
Bme18I GGWCC 2 cut(s) 527, 727
BmeT110I CYCGRG 1 cut(s) 241
BmgT120I GGNCC 3 cut(s) 527, 727, 736
BmiI GGNNCC 5 cut(s) 529, 699, 729, 748, 951
BmrFI CCNGG 2 cut(s) 384, 612
BpiI GAAGAC 1 cut(s) 908
BplI GAGNNNNNCTC 2 cut(s) 356, 388
BpmI CTGGAG 3 cut(s) 20, 450, 804
Bpu10I CCTNAGC 1 cut(s) 945
BpuEI CTTGAG 1 cut(s) 78
BpuMI CCSGG 1 cut(s) 384
BsaHI GRCGYC 1 cut(s) 657
BsaJI CCNNGG 5 cut(s) 129, 709, 739, 768, 970
BsaWI WCCGGW 2 cut(s) 176, 683
Bsc4I CCNNNNNNNGG 4 cut(s) 40, 68, 785, 887
Bse118I RCCGGY 1 cut(s) 176
Bse1I ACTGG 4 cut(s) 37, 154, 328, 337
Bse21I CCTNAGG 1 cut(s) 661
Bse3DI GCAATG 1 cut(s) 773
BseBI CCWGG 1 cut(s) 612
BseDI CCNNGG 5 cut(s) 129, 709, 739, 768, 970
BseGI GGATG 1 cut(s) 964
BseLI CCNNNNNNNGG 4 cut(s) 40, 68, 785, 887
BseMI GCAATG 1 cut(s) 773
BseMII CTCAG 2 cut(s) 354, 675
BseNI ACTGG 4 cut(s) 37, 154, 328, 337
BseRI GAGGAG 4 cut(s) 453, 807, 815, 818
BseSI GKGCMC 1 cut(s) 344
BseXI GCAGC 2 cut(s) 17, 577
Bsh1236I CGCG 1 cut(s) 69
Bsh1285I CGRYCG 1 cut(s) 89
BshFI GGCC 1 cut(s) 738
BshNI GGYRCC 1 cut(s) 949
BshTI ACCGGT 1 cut(s) 176
BsiEI CGRYCG 1 cut(s) 89
BsiHKAI GWGCWC 1 cut(s) 265
BsiHKCI CYCGRG 1 cut(s) 241
BsiSI CCGG 5 cut(s) 177, 207, 384, 684, 881
BslI CCNNNNNNNGG 4 cut(s) 40, 68, 785, 887
BsmAI GTCTC 4 cut(s) 244, 359, 789, 878
BsmBI CGTCTC 2 cut(s) 244, 789
BsnI GGCC 1 cut(s) 738
BsoBI CYCGRG 1 cut(s) 241
Bsp1286I GDGCHC 3 cut(s) 120, 265, 344
Bsp143I GATC 7 cut(s) 48, 86, 519, 746, 852, 897, 966
BspACI CCGC 5 cut(s) 24, 57, 69, 254, 837
BspANI GGCC 1 cut(s) 738
BspCNI CTCAG 2 cut(s) 355, 674
BspFNI CGCG 1 cut(s) 69
BspHI TCATGA 1 cut(s) 489
BspLI GGNNCC 5 cut(s) 529, 699, 729, 748, 951
BspMAI CTGCAG 1 cut(s) 595
BspPI GGATC 3 cut(s) 741, 754, 961
BspQI GCTCTTC 1 cut(s) 721
BspT107I GGYRCC 1 cut(s) 949
BsrBI CCGCTC 1 cut(s) 59
BsrDI GCAATG 1 cut(s) 773
BsrFI RCCGGY 1 cut(s) 176
BsrI ACTGG 4 cut(s) 37, 154, 328, 337
BssAI RCCGGY 1 cut(s) 176
BssECI CCNNGG 5 cut(s) 129, 709, 739, 768, 970
BssMI GATC 7 cut(s) 48, 86, 519, 746, 852, 897, 966
BssNI GRCGYC 1 cut(s) 657
BssT1I CCWWGG 1 cut(s) 970
Bst2UI CCWGG 1 cut(s) 612
Bst4CI ACNGT 6 cut(s) 356, 433, 446, 601, 643, 710
Bst6I CTCTTC 1 cut(s) 721
BstACI GRCGYC 1 cut(s) 657
BstC8I GCNNGC 3 cut(s) 136, 780, 878
BstDEI CTNAG 3 cut(s) 363, 661, 945
BstDSI CCRYGG 3 cut(s) 709, 739, 768
BstF5I GGATG 1 cut(s) 964
BstFNI CGCG 1 cut(s) 69
BstKTI GATC 7 cut(s) 51, 89, 522, 749, 855, 900, 969
BstMAI GTCTC 4 cut(s) 244, 359, 789, 878
BstMBI GATC 7 cut(s) 48, 86, 519, 746, 852, 897, 966
BstMCI CGRYCG 1 cut(s) 89
BstMWI GCNNNNNNNGC 6 cut(s) 50, 144, 212, 227, 260, 779
BstNI CCWGG 1 cut(s) 612
BstSCI CCNGG 2 cut(s) 382, 610
BstSFI CTRYAG 1 cut(s) 591
BstSLI GKGCMC 1 cut(s) 344
BstUI CGCG 1 cut(s) 69
BstV1I GCAGC 2 cut(s) 17, 577
BstV2I GAAGAC 1 cut(s) 908
BstX2I RGATCY 2 cut(s) 746, 966
BstYI RGATCY 2 cut(s) 746, 966
Bsu36I CCTNAGG 1 cut(s) 661
BsuI GTATCC 1 cut(s) 922
BsuRI GGCC 1 cut(s) 738
BtgI CCRYGG 3 cut(s) 709, 739, 768
BtsCI GGATG 1 cut(s) 964
BtsI GCAGTG 1 cut(s) 831
BtsIMutI CAGTG 4 cut(s) 344, 451, 831, 849
Cac8I GCNNGC 3 cut(s) 136, 780, 878
CciI TCATGA 1 cut(s) 489
Cfr10I RCCGGY 1 cut(s) 176
Cfr13I GGNCC 3 cut(s) 527, 727, 736
CseI GACGC 3 cut(s) 200, 544, 665
Csp6I GTAC 2 cut(s) 706, 950
CspAI ACCGGT 1 cut(s) 176
CspCI CAANNNNNGTGG 2 cut(s) 959, 994
CviAII CATG 2 cut(s) 307, 490
CviQI GTAC 2 cut(s) 706, 950
DdeI CTNAG 3 cut(s) 363, 661, 945
DpnI GATC 7 cut(s) 50, 88, 521, 748, 854, 899, 968
DpnII GATC 7 cut(s) 48, 86, 519, 746, 852, 897, 966
DrdI GACNNNNNNGTC 1 cut(s) 554
DseDI GACNNNNNNGTC 1 cut(s) 554
Eam1104I CTCTTC 1 cut(s) 721
EarI CTCTTC 1 cut(s) 721
Ecl136II GAGCTC 1 cut(s) 263
Eco130I CCWWGG 1 cut(s) 970
Eco24I GRGCYC 2 cut(s) 120, 265
Eco47I GGWCC 2 cut(s) 527, 727
Eco53kI GAGCTC 1 cut(s) 263
Eco57I CTGAAG 3 cut(s) 528, 825, 902
Eco81I CCTNAGG 1 cut(s) 661
Eco88I CYCGRG 1 cut(s) 241
EcoICRI GAGCTC 1 cut(s) 263
EcoO109I RGGNCCY 1 cut(s) 527
EcoRII CCWGG 1 cut(s) 610
EcoT14I CCWWGG 1 cut(s) 970
EcoT38I GRGCYC 2 cut(s) 120, 265
ErhI CCWWGG 1 cut(s) 970
Esp3I CGTCTC 2 cut(s) 244, 789
FaeI CATG 2 cut(s) 310, 493
FaiI YATR 8 cut(s) 282, 304, 308, 393, 491, 588, 759, 984
FalI AAGNNNNNCTT 2 cut(s) 395, 427
FatI CATG 2 cut(s) 306, 489
Fnu4HI GCNGC 3 cut(s) 6, 591, 837
FokI GGATG 1 cut(s) 971
FriOI GRGCYC 2 cut(s) 120, 265
Fsp4HI GCNGC 3 cut(s) 6, 591, 837
GluI GCNGC 3 cut(s) 6, 591, 837
GsuI CTGGAG 3 cut(s) 20, 450, 804
HaeIII GGCC 1 cut(s) 738
HapII CCGG 5 cut(s) 177, 207, 384, 684, 881
HgaI GACGC 3 cut(s) 200, 544, 665
Hin1I GRCGYC 1 cut(s) 657
Hin1II CATG 2 cut(s) 310, 493
HincII GTYRAC 1 cut(s) 989
HindII GTYRAC 1 cut(s) 989
HinfI GANTC 5 cut(s) 91, 210, 289, 579, 913
HpaII CCGG 5 cut(s) 177, 207, 384, 684, 881
HphI GGTGA 6 cut(s) 71, 166, 421, 629, 673, 907
Hpy166II GTNNAC 2 cut(s) 620, 989
Hpy188I TCNGA 9 cut(s) 86, 160, 190, 294, 364, 547, 861, 902, 928
Hpy188III TCNNGA 5 cut(s) 243, 467, 475, 490, 910
Hpy8I GTNNAC 2 cut(s) 620, 989
Hpy99I CGWCG 4 cut(s) 104, 194, 239, 928
HpyAV CCTTC 6 cut(s) 72, 160, 436, 518, 541, 730
HpyCH4III ACNGT 6 cut(s) 356, 433, 446, 601, 643, 710
HpyCH4IV ACGT 2 cut(s) 622, 822
HpyCH4V TGCA 2 cut(s) 395, 593
HpyF10VI GCNNNNNNNGC 6 cut(s) 50, 144, 212, 227, 260, 779
HpyF3I CTNAG 3 cut(s) 363, 661, 945
HpySE526I ACGT 2 cut(s) 622, 822
Hsp92I GRCGYC 1 cut(s) 657
Hsp92II CATG 2 cut(s) 310, 493
KpnI GGTACC 1 cut(s) 953
Kzo9I GATC 7 cut(s) 48, 86, 519, 746, 852, 897, 966
LguI GCTCTTC 1 cut(s) 721
LmnI GCTCC 8 cut(s) 64, 152, 191, 245, 260, 268, 466, 805
Lsp1109I GCAGC 2 cut(s) 17, 577
MaeII ACGT 2 cut(s) 622, 822
MaeIII GTNAC 2 cut(s) 595, 865
MalI GATC 7 cut(s) 50, 88, 521, 748, 854, 899, 968
MbiI CCGCTC 1 cut(s) 59
MboI GATC 7 cut(s) 48, 86, 519, 746, 852, 897, 966
MboII GAAGA 7 cut(s) 58, 581, 584, 708, 838, 908, 976
MflI RGATCY 2 cut(s) 746, 966
MhlI GDGCHC 3 cut(s) 120, 265, 344
MluCI AATT 2 cut(s) 559, 689
MlyI GAGTC 2 cut(s) 85, 922
MmeI TCCRAC 3 cut(s) 213, 628, 906
MseI TTAA 1 cut(s) 165
MslI CAYNNNNRTG 1 cut(s) 311
MspA1I CMGCKG 1 cut(s) 782
MspI CCGG 5 cut(s) 177, 207, 384, 684, 881
MspR9I CCNGG 2 cut(s) 384, 612
MvaI CCWGG 1 cut(s) 612
MvnI CGCG 1 cut(s) 69
MwoI GCNNNNNNNGC 6 cut(s) 50, 144, 212, 227, 260, 779
NciI CCSGG 1 cut(s) 384
NdeII GATC 7 cut(s) 48, 86, 519, 746, 852, 897, 966
NlaIII CATG 2 cut(s) 310, 493
NlaIV GGNNCC 5 cut(s) 529, 699, 729, 748, 951
NmeAIII GCCGAG 1 cut(s) 110
NmuCI GTSAC 2 cut(s) 595, 865
PagI TCATGA 1 cut(s) 489
PciSI GCTCTTC 1 cut(s) 721
PcsI WCGNNNNNNNCGW 1 cut(s) 906
PfeI GAWTC 3 cut(s) 210, 289, 579
PflFI GACNNNGTC 1 cut(s) 194
PfoI TCCNGGA 1 cut(s) 610
PinAI ACCGGT 1 cut(s) 176
PkrI GCNGC 3 cut(s) 7, 592, 838
Ple19I CGATCG 1 cut(s) 89
PleI GAGTC 2 cut(s) 85, 921
PpsI GAGTC 2 cut(s) 85, 921
PpuMI RGGWCCY 1 cut(s) 527
Psp124BI GAGCTC 1 cut(s) 265
Psp5II RGGWCCY 1 cut(s) 527
Psp6I CCWGG 1 cut(s) 610
PspGI CCWGG 1 cut(s) 610
PspN4I GGNNCC 5 cut(s) 529, 699, 729, 748, 951
PspPI GGNCC 3 cut(s) 527, 727, 736
PspPPI RGGWCCY 1 cut(s) 527
PstI CTGCAG 1 cut(s) 595
PsuI RGATCY 2 cut(s) 746, 966
PsyI GACNNNGTC 1 cut(s) 194
PvuI CGATCG 1 cut(s) 89
PvuII CAGCTG 1 cut(s) 782
RsaI GTAC 2 cut(s) 707, 951
RsaNI GTAC 2 cut(s) 706, 950
RseI CAYNNNNRTG 1 cut(s) 311
SacI GAGCTC 1 cut(s) 265
SapI GCTCTTC 1 cut(s) 721
SaqAI TTAA 1 cut(s) 165
SatI GCNGC 3 cut(s) 6, 591, 837
Sau3AI GATC 7 cut(s) 48, 86, 519, 746, 852, 897, 966
Sau96I GGNCC 3 cut(s) 527, 727, 736
SchI GAGTC 2 cut(s) 85, 922
ScrFI CCNGG 2 cut(s) 384, 612
SduI GDGCHC 3 cut(s) 120, 265, 344
SfcI CTRYAG 1 cut(s) 591
SinI GGWCC 2 cut(s) 527, 727
SmiMI CAYNNNNRTG 1 cut(s) 311
SmlI CTYRAG 2 cut(s) 93, 992
SmoI CTYRAG 2 cut(s) 93, 992
Sse9I AATT 2 cut(s) 559, 689
SsiI CCGC 5 cut(s) 24, 57, 69, 254, 837
SstI GAGCTC 1 cut(s) 265
StyD4I CCNGG 2 cut(s) 382, 610
StyI CCWWGG 1 cut(s) 970
TaaI ACNGT 6 cut(s) 356, 433, 446, 601, 643, 710
TaiI ACGT 2 cut(s) 625, 825
TaqI TCGA 7 cut(s) 89, 120, 414, 522, 534, 582, 909
TasI AATT 2 cut(s) 559, 689
TauI GCSGC 1 cut(s) 839
TfiI GAWTC 3 cut(s) 210, 289, 579
Tru1I TTAA 1 cut(s) 165
Tru9I TTAA 1 cut(s) 165
TscAI CASTG 4 cut(s) 344, 451, 838, 849
TseFI GTSAC 2 cut(s) 595, 865
TseI GCWGC 2 cut(s) 5, 590
Tsp45I GTSAC 2 cut(s) 595, 865
TspGWI ACGGA 1 cut(s) 564
TspRI CASTG 4 cut(s) 344, 451, 838, 849
Tth111I GACNNNGTC 1 cut(s) 194
VpaK11BI GGWCC 2 cut(s) 527, 727
XapI RAATTY 1 cut(s) 689
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.