Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0013223

Physical Location & Seq

Genomic Coordinates Forward (+)

15910978 .. 15912737

Gene Structure 1760 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G145900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 999 bp

ATGGCAGCCTCACTCCAAGCAGCTGCTACTCTTATGCAGCCCACCAAGGTGGGCGCGCCGGCAAGGACCAGCCTTCAGCTCAGGCCCTCCCAGAATGTCTCCAAGGCCTTTGGCTTGGAACCATCTGCCTCTGCTAGGCTCACTTGCTCTCTGCAGTCTGATCTCAAGGACTTTGCTCACAAGTGTGTTGATGCCTCTAAGATTGCTGGCTTTGCTCTTGCTACTTCTGCCCTCGTCGTCTCGGGAGCAGGTGCAGAGGGAGTTCCAAAGAGGCTGACCTTTGATGAAATCCAGAGCAAGACATACTTGGAAGTGAAGGGGACAGGAACTGCAAACCAATGCCCAACCATTGATGGAGGGTTAGAAGCATTCGCCTTCAAGCCGGGCAAGTACACCGCCAAGAAGTTCTGCCTAGAGCCCACATCCTTCACTGTCAAGGCAGAGAGTGTGAACAAGAATGCTCCACCAGAGTTCCAAAACACCAAGCTGATGACCCGTCTAACCTACACCCTCGATGAGATCGAAGGGCCTTTCGAAGTGTCCCCAGATGGCACTCTCAAGTTTGAGGAGAAAGATGGGATTGACTATGCTGCAGTCACAGTCCAGCTCCCCGGAGGCGAGCGTGTCCCTTTCCTCTTCACCATCAAACAGCTTGTAGCCTCAGGCAAACCCGAAAACTTTGGAGGGGAGTTTCTAGTACCATCGTACCGCGGTTCTTCTTTCTTGGACCCAAAGGGTAGAGGAGGCTCCACTGGTTATGACAATGCCATTGCATTGCCAGCAGGAGGCAGAGGAGATGAGGAGGAGTTGGCCAAGGAGAACATCAAGAATACTGCTTCATCAAAAGGGAAGATCACACTGAGTGTGACCAAGAGCAAGCCTGAGAGTGGAGAGTTGATTGGAGTGTTTGAGAGCATCCAGCCATCTGATACTGATTTGGGAGCAAAGACTCCAAAGGATGTCAAAATCCAGGGAGTCTGGTATGCTCAGCTTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0016020 GO:0031976 GO:0031984 GO:0034357 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0055035

KEGG Pathways

Metabolic & Signaling

ko00195 ko01100 map00195 map01100

Pfam Domains

Protein Families

MSP

Protein Analysis

333

Amino Acids

35.2

Weight (kDa)

6.09

Isoelectric Point (pI)

35.99

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013223)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50820 AT5G66570
fragaria_vesca	FvH4_1g14430
malus_domestica	MD02G1157800.v1.1 MD15G1272500.v1.1
prunus_persica	Prupe.7G145900_v2.0.a1
pyrus_communis	pycom02g12470 pycom15g23610
rosa_chinensis	RchiOBHm_Chr2g0103161
rosa_laevigata	RLG00000017214
rosa_multiflora	Rmu_sc0000388.1_g000004
rosa_roxburghii	Rroxscaffold_2G00139880
rosa_rugosa	Rorug02G0112200
rosa_samantha	Rh2AG161000 Rh2BG167700 Rh2CG168000 Rh2DG166600
rosa_wichuraiana	Rw2G012630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	239
Acc36I	ACCTGC	1 cut(s)	239
AccII	CGCG	2 cut(s)	56, 711
AciI	CCGC	3 cut(s)	396, 709, 711
AcoI	YGGCCR	1 cut(s)	810
AcuI	CTGAAG	1 cut(s)	59
AdeI	CACNNNGTG	1 cut(s)	863
AfaI	GTAC	3 cut(s)	392, 699, 707
AfiI	CCNNNNNNNGG	3 cut(s)	135, 785, 887
AgsI	TTSAA	1 cut(s)	379
AjnI	CCWGG	1 cut(s)	969
AleI	CACNNNNGTG	2 cut(s)	47, 183
AluBI	AGCT	6 cut(s)	23, 79, 487, 607, 652, 991
AluI	AGCT	6 cut(s)	23, 79, 487, 607, 652, 991
Alw26I	GTCTC	2 cut(s)	103, 244
AlwNI	CAGNNNCTG	1 cut(s)	329
Ama87I	CYCGRG	1 cut(s)	241
AoxI	GGCC	4 cut(s)	83, 105, 527, 810
ApeKI	GCWGC	5 cut(s)	5, 20, 23, 37, 590
AscI	GGCGCGCC	1 cut(s)	54
AspLEI	GCGC	2 cut(s)	56, 58
AspS9I	GGNCC	4 cut(s)	66, 84, 527, 727
AsuC2I	CCSGG	2 cut(s)	384, 612
AsuHPI	GGTGA	1 cut(s)	631
AsuII	TTCGAA	1 cut(s)	534
AvaI	CYCGRG	1 cut(s)	241
AvaII	GGWCC	2 cut(s)	66, 727
AxyI	CCTNAGG	1 cut(s)	661
BaeI	ACNNNNGTAYC	2 cut(s)	689, 722
BalI	TGGCCA	1 cut(s)	812
BanII	GRGCYC	1 cut(s)	420
BbvI	GCAGC	5 cut(s)	10, 17, 32, 49, 577
BccI	CCATC	7 cut(s)	130, 347, 542, 569, 650, 709, 931
BciT130I	CCWGG	1 cut(s)	971
BcnI	CCSGG	2 cut(s)	384, 612
BcoDI	GTCTC	2 cut(s)	103, 244
BfaI	CTAG	3 cut(s)	135, 413, 695
BfmI	CTRYAG	2 cut(s)	152, 591
BfuAI	ACCTGC	1 cut(s)	239
BisI	GCNGC	5 cut(s)	6, 21, 24, 38, 591
BlpI	GCTNAGC	1 cut(s)	987
BlsI	GCNGC	5 cut(s)	7, 22, 25, 39, 592
Bme1390I	CCNGG	3 cut(s)	384, 612, 971
Bme18I	GGWCC	2 cut(s)	66, 727
BmeT110I	CYCGRG	1 cut(s)	241
BmgT120I	GGNCC	4 cut(s)	66, 84, 527, 727
BmiI	GGNNCC	3 cut(s)	120, 729, 748
BmrFI	CCNGG	3 cut(s)	384, 612, 971
BmsI	GCATC	2 cut(s)	181, 924
Bpu10I	CCTNAGC	1 cut(s)	80
Bpu1102I	GCTNAGC	1 cut(s)	987
Bpu14I	TTCGAA	1 cut(s)	534
BpuEI	CTTGAG	2 cut(s)	149, 542
BpuMI	CCSGG	2 cut(s)	384, 612
BsaJI	CCNNGG	6 cut(s)	45, 102, 610, 709, 813, 970
Bsc4I	CCNNNNNNNGG	3 cut(s)	135, 785, 887
Bse118I	RCCGGY	1 cut(s)	58
Bse1I	ACTGG	1 cut(s)	757
Bse21I	CCTNAGG	1 cut(s)	661
Bse3DI	GCAATG	2 cut(s)	768, 773
BseBI	CCWGG	1 cut(s)	971
BseDI	CCNNGG	6 cut(s)	45, 102, 610, 709, 813, 970
BseGI	GGATG	3 cut(s)	422, 915, 964
BseLI	CCNNNNNNNGG	3 cut(s)	135, 785, 887
BseMI	GCAATG	2 cut(s)	768, 773
BseMII	CTCAG	4 cut(s)	94, 675, 851, 873
BseNI	ACTGG	1 cut(s)	757
BsePI	GCGCGC	1 cut(s)	54
BseRI	GAGGAG	5 cut(s)	581, 756, 807, 815, 818
BseXI	GCAGC	5 cut(s)	10, 17, 32, 49, 577
BsgI	GTGCAG	1 cut(s)	273
Bsh1236I	CGCG	2 cut(s)	56, 711
BshFI	GGCC	4 cut(s)	85, 107, 529, 812
BsiHKCI	CYCGRG	1 cut(s)	241
BsiSI	CCGG	3 cut(s)	59, 383, 612
BslFI	GGGAC	3 cut(s)	334, 526, 611
BslI	CCNNNNNNNGG	3 cut(s)	135, 785, 887
BsmAI	GTCTC	2 cut(s)	103, 244
BsmBI	CGTCTC	1 cut(s)	244
BsmFI	GGGAC	3 cut(s)	334, 526, 611
BsmI	GAATGC	2 cut(s)	368, 463
BsnI	GGCC	4 cut(s)	85, 107, 529, 812
BsoBI	CYCGRG	1 cut(s)	241
Bsp119I	TTCGAA	1 cut(s)	534
Bsp1286I	GDGCHC	1 cut(s)	420
Bsp143I	GATC	3 cut(s)	160, 519, 852
Bsp1720I	GCTNAGC	1 cut(s)	987
BspACI	CCGC	3 cut(s)	396, 709, 711
BspANI	GGCC	4 cut(s)	85, 107, 529, 812
BspCNI	CTCAG	4 cut(s)	93, 674, 852, 874
BspFNI	CGCG	2 cut(s)	56, 711
BspLI	GGNNCC	3 cut(s)	120, 729, 748
BspMAI	CTGCAG	2 cut(s)	156, 595
BspMI	ACCTGC	1 cut(s)	239
BspT104I	TTCGAA	1 cut(s)	534
BsrDI	GCAATG	2 cut(s)	768, 773
BsrFI	RCCGGY	1 cut(s)	58
BsrI	ACTGG	1 cut(s)	757
BssAI	RCCGGY	1 cut(s)	58
BssECI	CCNNGG	6 cut(s)	45, 102, 610, 709, 813, 970
BssHII	GCGCGC	1 cut(s)	54
BssMI	GATC	3 cut(s)	160, 519, 852
BssT1I	CCWWGG	3 cut(s)	45, 102, 813
Bst2UI	CCWGG	1 cut(s)	971
Bst4CI	ACNGT	2 cut(s)	433, 601
Bst6I	CTCTTC	1 cut(s)	641
BstBI	TTCGAA	1 cut(s)	534
BstC8I	GCNNGC	6 cut(s)	56, 60, 208, 620, 780, 878
BstDEI	CTNAG	6 cut(s)	80, 198, 661, 860, 882, 987
BstDSI	CCRYGG	1 cut(s)	709
BstENI	CCTNNNNNAGG	1 cut(s)	133
BstF5I	GGATG	3 cut(s)	422, 915, 964
BstFNI	CGCG	2 cut(s)	56, 711
BstHHI	GCGC	2 cut(s)	56, 58
BstKTI	GATC	3 cut(s)	163, 522, 855
BstMAI	GTCTC	2 cut(s)	103, 244
BstMBI	GATC	3 cut(s)	160, 519, 852
BstMWI	GCNNNNNNNGC	3 cut(s)	212, 227, 779
BstNI	CCWGG	1 cut(s)	971
BstSCI	CCNGG	3 cut(s)	382, 610, 969
BstSFI	CTRYAG	2 cut(s)	152, 591
BstUI	CGCG	2 cut(s)	56, 711
BstV1I	GCAGC	5 cut(s)	10, 17, 32, 49, 577
BstXI	CCANNNNNNTGG	1 cut(s)	49
Bsu36I	CCTNAGG	1 cut(s)	661
BsuRI	GGCC	4 cut(s)	85, 107, 529, 812
BtgI	CCRYGG	1 cut(s)	709
BtsCI	GGATG	3 cut(s)	422, 915, 964
BtsIMutI	CAGTG	3 cut(s)	429, 750, 857
BveI	ACCTGC	1 cut(s)	239
Cac8I	GCNNGC	6 cut(s)	56, 60, 208, 620, 780, 878
CaiI	CAGNNNCTG	1 cut(s)	329
CfoI	GCGC	2 cut(s)	56, 58
Cfr10I	RCCGGY	1 cut(s)	58
Cfr13I	GGNCC	4 cut(s)	66, 84, 527, 727
Cfr42I	CCGCGG	1 cut(s)	712
Csp6I	GTAC	3 cut(s)	391, 698, 706
CviQI	GTAC	3 cut(s)	391, 698, 706
DdeI	CTNAG	6 cut(s)	80, 198, 661, 860, 882, 987
DpnI	GATC	3 cut(s)	162, 521, 854
DpnII	GATC	3 cut(s)	160, 519, 852
DraIII	CACNNNGTG	1 cut(s)	863
EaeI	YGGCCR	1 cut(s)	810
Eam1104I	CTCTTC	1 cut(s)	641
EarI	CTCTTC	1 cut(s)	641
Eco130I	CCWWGG	3 cut(s)	45, 102, 813
Eco147I	AGGCCT	1 cut(s)	107
Eco24I	GRGCYC	1 cut(s)	420
Eco47I	GGWCC	2 cut(s)	66, 727
Eco57I	CTGAAG	1 cut(s)	59
Eco81I	CCTNAGG	1 cut(s)	661
Eco88I	CYCGRG	1 cut(s)	241
EcoNI	CCTNNNNNAGG	1 cut(s)	133
EcoO109I	RGGNCCY	2 cut(s)	84, 527
EcoRII	CCWGG	1 cut(s)	969
EcoT14I	CCWWGG	3 cut(s)	45, 102, 813
EcoT38I	GRGCYC	1 cut(s)	420
ErhI	CCWWGG	3 cut(s)	45, 102, 813
Esp3I	CGTCTC	1 cut(s)	244
FaiI	YATR	5 cut(s)	35, 304, 588, 759, 984
FalI	AAGNNNNNCTT	2 cut(s)	290, 322
FaqI	GGGAC	3 cut(s)	334, 526, 611
Fnu4HI	GCNGC	5 cut(s)	6, 21, 24, 38, 591
FokI	GGATG	3 cut(s)	409, 902, 971
FriOI	GRGCYC	1 cut(s)	420
Fsp4HI	GCNGC	5 cut(s)	6, 21, 24, 38, 591
FspBI	CTAG	3 cut(s)	135, 413, 695
GlaI	GCGC	2 cut(s)	55, 57
GluI	GCNGC	5 cut(s)	6, 21, 24, 38, 591
HaeIII	GGCC	4 cut(s)	85, 107, 529, 812
HapII	CCGG	3 cut(s)	59, 383, 612
HhaI	GCGC	2 cut(s)	56, 58
Hin6I	GCGC	2 cut(s)	54, 56
HinP1I	GCGC	2 cut(s)	54, 56
HinfI	GANTC	2 cut(s)	949, 975
HpaII	CCGG	3 cut(s)	59, 383, 612
HphI	GGTGA	1 cut(s)	631
Hpy166II	GTNNAC	2 cut(s)	393, 451
Hpy188I	TCNGA	2 cut(s)	160, 928
Hpy188III	TCNNGA	3 cut(s)	243, 292, 826
Hpy8I	GTNNAC	2 cut(s)	393, 451
Hpy99I	CGWCG	1 cut(s)	239
HpyAV	CCTTC	5 cut(s)	83, 310, 385, 436, 518
HpyCH4III	ACNGT	2 cut(s)	433, 601
HpyCH4V	TGCA	6 cut(s)	37, 154, 254, 332, 593, 773
HpyF10VI	GCNNNNNNNGC	3 cut(s)	212, 227, 779
HpyF3I	CTNAG	6 cut(s)	80, 198, 661, 860, 882, 987
HspAI	GCGC	2 cut(s)	54, 56
KroI	GCCGGC	1 cut(s)	58
KroNI	GCCGGC	1 cut(s)	60
KspI	CCGCGG	1 cut(s)	712
Kzo9I	GATC	3 cut(s)	160, 519, 852
LmnI	GCTCC	5 cut(s)	245, 466, 612, 752, 941
Lsp1109I	GCAGC	5 cut(s)	10, 17, 32, 49, 577
LweI	GCATC	2 cut(s)	181, 924
MaeI	CTAG	3 cut(s)	135, 413, 695
MaeIII	GTNAC	2 cut(s)	595, 865
MalI	GATC	3 cut(s)	162, 521, 854
MboI	GATC	3 cut(s)	160, 519, 852
MboII	GAAGA	3 cut(s)	628, 708, 862
MhlI	GDGCHC	1 cut(s)	420
MlsI	TGGCCA	1 cut(s)	812
MluNI	TGGCCA	1 cut(s)	812
MlyI	GAGTC	2 cut(s)	943, 984
Mox20I	TGGCCA	1 cut(s)	812
MroNI	GCCGGC	1 cut(s)	58
MscI	TGGCCA	1 cut(s)	812
MseI	TTAA	1 cut(s)	997
MslI	CAYNNNNRTG	2 cut(s)	47, 183
Msp20I	TGGCCA	1 cut(s)	812
MspA1I	CMGCKG	2 cut(s)	23, 711
MspI	CCGG	3 cut(s)	59, 383, 612
MspR9I	CCNGG	3 cut(s)	384, 612, 971
Mva1269I	GAATGC	2 cut(s)	368, 463
MvaI	CCWGG	1 cut(s)	971
MvnI	CGCG	2 cut(s)	56, 711
MwoI	GCNNNNNNNGC	3 cut(s)	212, 227, 779
NaeI	GCCGGC	1 cut(s)	60
NciI	CCSGG	2 cut(s)	384, 612
NdeII	GATC	3 cut(s)	160, 519, 852
NgoMIV	GCCGGC	1 cut(s)	58
NlaIV	GGNNCC	3 cut(s)	120, 729, 748
NmuCI	GTSAC	2 cut(s)	595, 865
NspV	TTCGAA	1 cut(s)	534
OliI	CACNNNNGTG	2 cut(s)	47, 183
PalAI	GGCGCGCC	1 cut(s)	54
PaqCI	CACCTGC	1 cut(s)	239
PauI	GCGCGC	1 cut(s)	54
PceI	AGGCCT	1 cut(s)	107
PcsI	WCGNNNNNNNCGW	1 cut(s)	519
PctI	GAATGC	2 cut(s)	368, 463
PdiI	GCCGGC	1 cut(s)	60
PkrI	GCNGC	5 cut(s)	7, 22, 25, 39, 592
PleI	GAGTC	2 cut(s)	943, 983
PpsI	GAGTC	2 cut(s)	943, 983
Psp6I	CCWGG	1 cut(s)	969
PspGI	CCWGG	1 cut(s)	969
PspN4I	GGNNCC	3 cut(s)	120, 729, 748
PspPI	GGNCC	4 cut(s)	66, 84, 527, 727
PstI	CTGCAG	2 cut(s)	156, 595
PstNI	CAGNNNCTG	1 cut(s)	329
PteI	GCGCGC	1 cut(s)	54
PvuII	CAGCTG	1 cut(s)	23
RsaI	GTAC	3 cut(s)	392, 699, 707
RsaNI	GTAC	3 cut(s)	391, 698, 706
RseI	CAYNNNNRTG	2 cut(s)	47, 183
SacII	CCGCGG	1 cut(s)	712
SaqAI	TTAA	1 cut(s)	997
SatI	GCNGC	5 cut(s)	6, 21, 24, 38, 591
Sau3AI	GATC	3 cut(s)	160, 519, 852
Sau96I	GGNCC	4 cut(s)	66, 84, 527, 727
SchI	GAGTC	2 cut(s)	943, 984
ScrFI	CCNGG	3 cut(s)	384, 612, 971
SduI	GDGCHC	1 cut(s)	420
SfaNI	GCATC	2 cut(s)	181, 924
SfcI	CTRYAG	2 cut(s)	152, 591
Sfr303I	CCGCGG	1 cut(s)	712
SfuI	TTCGAA	1 cut(s)	534
SgrBI	CCGCGG	1 cut(s)	712
SgsI	GGCGCGCC	1 cut(s)	54
SinI	GGWCC	2 cut(s)	66, 727
SmiMI	CAYNNNNRTG	2 cut(s)	47, 183
SmlI	CTYRAG	2 cut(s)	164, 557
SmoI	CTYRAG	2 cut(s)	164, 557
SseBI	AGGCCT	1 cut(s)	107
SsiI	CCGC	3 cut(s)	396, 709, 711
SspMI	CTAG	3 cut(s)	135, 413, 695
StuI	AGGCCT	1 cut(s)	107
StyD4I	CCNGG	3 cut(s)	382, 610, 969
StyI	CCWWGG	3 cut(s)	45, 102, 813
TaaI	ACNGT	2 cut(s)	433, 601
TaqI	TCGA	3 cut(s)	513, 522, 534
TatI	WGTACW	1 cut(s)	390
Tru1I	TTAA	1 cut(s)	997
Tru9I	TTAA	1 cut(s)	997
TscAI	CASTG	3 cut(s)	436, 757, 864
TseFI	GTSAC	2 cut(s)	595, 865
TseI	GCWGC	5 cut(s)	5, 20, 23, 37, 590
Tsp45I	GTSAC	2 cut(s)	595, 865
TspDTI	ATGAA	2 cut(s)	300, 828
TspRI	CASTG	3 cut(s)	436, 757, 864
VpaK11BI	GGWCC	2 cut(s)	66, 727
XagI	CCTNNNNNAGG	1 cut(s)	133
XspI	CTAG	3 cut(s)	135, 413, 695

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.