Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007859

Physical Location & Seq

Genomic Coordinates Reverse (-)

26930539 .. 26933352

Gene Structure 2814 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G67480.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1119 bp

ATGGTGACAGGTTGTGTTGATCTTCATCAATCTTTCAAATCTGCAGATTCATCTTCTGTGCCAATTCCTCCTCCTCTTCCATCAAAATCTGATGGACTCAAGAAAAAACTTGGGCATAGCAGCGTTTCGACAGCCACAAGAGATATGTGGGATCGTCTTTTCAATGACGGATACAAAGCTGATGTAGTCATCTATACAGATAATGGCAGTATCATCTATGCTCATGCCAACATCCTTGGAACTGCTTCCACTGTGATCAAAGGCATGTTGAAGCAAGCCAAGAGACATGGCAAGTGGCATACAATATCAATCCGAGGTGTCCCTCATGATGCTGTGCGAGTTTTTATCCGTTTCCTCTACTCTTCTTGCTATGAGAAAGAAGAAATGAACGAGTTTATCATGCATTTGCTACTTCTGTCACACGCGTACGTGGTTCCTCAGCTGAAACGGGTCTGTGAATGGCATCTAGAACATGGTTTGCTTACCACTGAGAATGTGGTTGATGTGTTCCAGCTTGCGCTGCTGTGTGATTTCCCTCGGCTTAGCCTCATATCTCACCGTATGATCATGAAACACTTTAACGAACTCTCTGCGACAGAAGCATGGACAGCTATGAAGAAAAGCCATCCCTTTCTTGAGAAAGAAGTTAGAGACTCAGTAATCATCGAAGCAAATACGCGGAAAGAGAGGATGAGAAAACGCAATGATCAGAGGATATATTCGCAGCTATACGAAGCAATGGAAGCACTTGTTCATATATGCAGAGATGGATGTAAAACAATAGGGCCACACGATAAAGATTTCAAACCGAACCATGCAACGTGTAACTATGAAGCTTGCAAGGGATTAGAATCACTGATCCGGCATTTCGCAGGCTGTAAGCTAAGAGTTCCAGGAGGTTGCGTGCATTGCAAGAGAATGTGGCAACTCCTTGAACTGCATTCACGTGTTTGCGCAGGTTCTGATCAATGTCGAGTCCCTCTATGCAGAAACCTTAAGGAGAAGATGGAGAAACAGAGCAAGAAAGATGAGTCGAGATGGAAACTTCTGGTGAAGAATGTATTGGGGAGTAAGAAAATCGGAGGCTCTCCTTTCTTTTTACCGGTGACAAACTGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000302 GO:0001101 GO:0003674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006355 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006970 GO:0006979 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009266 GO:0009409 GO:0009611 GO:0009628 GO:0009636 GO:0009651 GO:0009719 GO:0009725 GO:0009733 GO:0009739 GO:0009751 GO:0009753 GO:0009889 GO:0009987 GO:0010033 GO:0010035 GO:0010200 GO:0010243 GO:0010468 GO:0010498 GO:0010556 GO:0014070 GO:0016020 GO:0019005 GO:0019219 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0030162 GO:0030163 GO:0031090 GO:0031323 GO:0031326 GO:0031461 GO:0031625 GO:0032991 GO:0033993 GO:0042221 GO:0042493 GO:0042542 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046677 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051246 GO:0051252 GO:0051603 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0098588 GO:0098805 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1901700 GO:1902494 GO:1903506 GO:1990234 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB zf-TAZ

Protein Analysis

372

Amino Acids

42.46

Weight (kDa)

9.25

Isoelectric Point (pI)

36.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BTB	PF00651	64 - 169	1.4e-10	BTB/POZ domain
zf-TAZ	PF02135	255 - 340	3.9e-11	TAZ zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007859)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G37610 AT5G67480 AT5G67480 AT5G67480
fragaria_vesca	FvH4_1g17510 FvH4_1g17510 FvH4_1g17510 FvH4_1g17510 FvH4_1g17510
malus_domestica	MD02G1184400.v1.1
prunus_persica	Prupe.6G222100_v2.0.a1 Prupe.6G222100_v2.0.a1 Prupe.6G222100_v2.0.a1
pyrus_communis	pycom02g14950
rosa_chinensis	RchiOBHm_Chr2g0107741
rosa_laevigata	RLG00000017612
rosa_multiflora	Rmu_sc0009624.1_g000011
rosa_roxburghii	Rroxscaffold_2G00135980
rosa_rugosa	Rorug02G0147400
rosa_samantha	Rh2AG197300 Rh2BG209600 Rh2CG201800 Rh2DG205200
rosa_wichuraiana	Rw2G015570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	955
Acc36I	ACCTGC	1 cut(s)	947
AccII	CGCG	2 cut(s)	425, 679
AciI	CCGC	1 cut(s)	679
AclWI	GGATC	2 cut(s)	159, 853
AcvI	CACGTG	1 cut(s)	947
AfaI	GTAC	1 cut(s)	428
AflII	CTTAAG	1 cut(s)	995
AflIII	ACRYGT	3 cut(s)	423, 821, 946
AgeI	ACCGGT	1 cut(s)	1102
AgsI	TTSAA	5 cut(s)	37, 163, 271, 805, 935
AjnI	CCWGG	1 cut(s)	892
AjuI	GAANNNNNNNTTGG	2 cut(s)	1046, 1078
AluBI	AGCT	7 cut(s)	179, 442, 514, 611, 727, 836, 883
AluI	AGCT	7 cut(s)	179, 442, 514, 611, 727, 836, 883
Alw26I	GTCTC	2 cut(s)	277, 645
AlwI	GGATC	2 cut(s)	159, 853
AlwNI	CAGNNNCTG	1 cut(s)	962
AoxI	GGCC	1 cut(s)	785
ApeKI	GCWGC	3 cut(s)	120, 520, 724
AsiGI	ACCGGT	1 cut(s)	1102
Asp700I	GAANNNNTTC	1 cut(s)	244
AspLEI	GCGC	2 cut(s)	520, 956
AspS9I	GGNCC	1 cut(s)	785
AsuHPI	GGTGA	4 cut(s)	16, 548, 1063, 1117
BbrPI	CACGTG	1 cut(s)	947
BbvCI	CCTCAGC	1 cut(s)	438
BbvI	GCAGC	3 cut(s)	132, 507, 736
BccI	CCATC	6 cut(s)	86, 88, 633, 761, 1000, 1032
BcgI	CGANNNNNNTGC	2 cut(s)	572, 606
BciT130I	CCWGG	1 cut(s)	894
BciVI	GTATCC	1 cut(s)	164
BclI	TGATCA	4 cut(s)	255, 564, 706, 964
BcoDI	GTCTC	2 cut(s)	277, 645
BfaI	CTAG	1 cut(s)	467
BfmI	CTRYAG	1 cut(s)	42
BfrI	CTTAAG	1 cut(s)	995
BfuAI	ACCTGC	1 cut(s)	947
BfuI	GTATCC	1 cut(s)	164
BisI	GCNGC	3 cut(s)	121, 521, 725
BlpI	GCTNAGC	1 cut(s)	542
BlsI	GCNGC	3 cut(s)	122, 522, 726
Bme1390I	CCNGG	1 cut(s)	894
BmgT120I	GGNCC	1 cut(s)	785
BmiI	GGNNCC	1 cut(s)	435
BmrFI	CCNGG	1 cut(s)	894
BmsI	GCATC	2 cut(s)	319, 472
Bpu10I	CCTNAGC	1 cut(s)	438
Bpu1102I	GCTNAGC	1 cut(s)	542
BpuEI	CTTGAG	2 cut(s)	83, 656
BsaAI	YACGTR	2 cut(s)	430, 947
BsaBI	GATNNNNATC	2 cut(s)	24, 850
BsaJI	CCNNGG	3 cut(s)	235, 313, 536
BsaWI	WCCGGW	1 cut(s)	1102
BsaXI	ACNNNNNCTCC	2 cut(s)	888, 918
Bse118I	RCCGGY	1 cut(s)	1102
Bse3DI	GCAATG	3 cut(s)	709, 744, 907
Bse8I	GATNNNNATC	2 cut(s)	24, 850
BseBI	CCWGG	1 cut(s)	894
BseDI	CCNNGG	3 cut(s)	235, 313, 536
BseGI	GGATG	4 cut(s)	231, 625, 696, 776
BseJI	GATNNNNATC	2 cut(s)	24, 850
BseMI	GCAATG	3 cut(s)	709, 744, 907
BseMII	CTCAG	3 cut(s)	452, 480, 669
BseRI	GAGGAG	2 cut(s)	60, 63
BseXI	GCAGC	3 cut(s)	132, 507, 736
Bsh1236I	CGCG	2 cut(s)	425, 679
BshFI	GGCC	1 cut(s)	787
BshTI	ACCGGT	1 cut(s)	1102
BsiSI	CCGG	2 cut(s)	862, 1103
BsiWI	CGTACG	1 cut(s)	426
BslFI	GGGAC	2 cut(s)	305, 962
BsmAI	GTCTC	2 cut(s)	277, 645
BsmFI	GGGAC	2 cut(s)	305, 962
BsmI	GAATGC	1 cut(s)	940
BsnI	GGCC	1 cut(s)	787
Bsp143I	GATC	7 cut(s)	19, 151, 255, 564, 706, 858, 964
Bsp1720I	GCTNAGC	1 cut(s)	542
BspACI	CCGC	1 cut(s)	679
BspANI	GGCC	1 cut(s)	787
BspCNI	CTCAG	3 cut(s)	451, 481, 668
BspFNI	CGCG	2 cut(s)	425, 679
BspHI	TCATGA	2 cut(s)	325, 567
BspLI	GGNNCC	1 cut(s)	435
BspMAI	CTGCAG	1 cut(s)	46
BspMI	ACCTGC	1 cut(s)	947
BspPI	GGATC	2 cut(s)	159, 853
BspTI	CTTAAG	1 cut(s)	995
BsrDI	GCAATG	3 cut(s)	709, 744, 907
BsrFI	RCCGGY	1 cut(s)	1102
BssAI	RCCGGY	1 cut(s)	1102
BssECI	CCNNGG	3 cut(s)	235, 313, 536
BssMI	GATC	7 cut(s)	19, 151, 255, 564, 706, 858, 964
BssT1I	CCWWGG	1 cut(s)	235
Bst2UI	CCWGG	1 cut(s)	894
Bst4CI	ACNGT	3 cut(s)	253, 560, 1115
Bst6I	CTCTTC	2 cut(s)	81, 367
BstAFI	CTTAAG	1 cut(s)	995
BstBAI	YACGTR	2 cut(s)	430, 947
BstC8I	GCNNGC	5 cut(s)	276, 516, 838, 874, 905
BstDEI	CTNAG	5 cut(s)	438, 489, 542, 655, 884
BstF5I	GGATG	4 cut(s)	231, 625, 696, 776
BstFNI	CGCG	2 cut(s)	425, 679
BstHHI	GCGC	2 cut(s)	520, 956
BstKTI	GATC	7 cut(s)	22, 154, 258, 567, 709, 861, 967
BstMAI	GTCTC	2 cut(s)	277, 645
BstMBI	GATC	7 cut(s)	19, 151, 255, 564, 706, 858, 964
BstMWI	GCNNNNNNNGC	5 cut(s)	520, 599, 608, 743, 909
BstNI	CCWGG	1 cut(s)	894
BstNSI	RCATGY	1 cut(s)	268
BstSCI	CCNGG	1 cut(s)	892
BstSFI	CTRYAG	1 cut(s)	42
BstUI	CGCG	2 cut(s)	425, 679
BstV1I	GCAGC	3 cut(s)	132, 507, 736
BsuI	GTATCC	1 cut(s)	164
BsuRI	GGCC	1 cut(s)	787
BtsCI	GGATG	4 cut(s)	231, 625, 696, 776
BtsIMutI	CAGTG	3 cut(s)	249, 486, 854
BveI	ACCTGC	1 cut(s)	947
Cac8I	GCNNGC	5 cut(s)	276, 516, 838, 874, 905
CaiI	CAGNNNCTG	1 cut(s)	962
CciI	TCATGA	2 cut(s)	325, 567
CfoI	GCGC	2 cut(s)	520, 956
Cfr10I	RCCGGY	1 cut(s)	1102
Cfr13I	GGNCC	1 cut(s)	785
Csp6I	GTAC	1 cut(s)	427
CspAI	ACCGGT	1 cut(s)	1102
CviAII	CATG	9 cut(s)	224, 265, 287, 326, 400, 473, 568, 603, 815
CviQI	GTAC	1 cut(s)	427
DdeI	CTNAG	5 cut(s)	438, 489, 542, 655, 884
DpnI	GATC	7 cut(s)	21, 153, 257, 566, 708, 860, 966
DpnII	GATC	7 cut(s)	19, 151, 255, 564, 706, 858, 964
Eam1104I	CTCTTC	2 cut(s)	81, 367
EarI	CTCTTC	2 cut(s)	81, 367
Eco130I	CCWWGG	1 cut(s)	235
Eco72I	CACGTG	1 cut(s)	947
EcoRII	CCWGG	1 cut(s)	892
EcoT14I	CCWWGG	1 cut(s)	235
EcoT22I	ATGCAT	1 cut(s)	405
ErhI	CCWWGG	1 cut(s)	235
FaeI	CATG	9 cut(s)	227, 268, 290, 329, 403, 476, 571, 606, 818
FaqI	GGGAC	2 cut(s)	305, 962
FatI	CATG	9 cut(s)	223, 264, 286, 325, 399, 472, 567, 602, 814
FbaI	TGATCA	4 cut(s)	255, 564, 706, 964
Fnu4HI	GCNGC	3 cut(s)	121, 521, 725
FokI	GGATG	4 cut(s)	218, 612, 703, 783
Fsp4HI	GCNGC	3 cut(s)	121, 521, 725
FspBI	CTAG	1 cut(s)	467
FspI	TGCGCA	1 cut(s)	955
GlaI	GCGC	2 cut(s)	519, 955
GluI	GCNGC	3 cut(s)	121, 521, 725
HaeIII	GGCC	1 cut(s)	787
HapII	CCGG	2 cut(s)	862, 1103
HhaI	GCGC	2 cut(s)	520, 956
Hin1II	CATG	9 cut(s)	227, 268, 290, 329, 403, 476, 571, 606, 818
Hin6I	GCGC	2 cut(s)	518, 954
HinP1I	GCGC	2 cut(s)	518, 954
HindIII	AAGCTT	1 cut(s)	834
HinfI	GANTC	6 cut(s)	47, 96, 653, 851, 975, 1031
HpaII	CCGG	2 cut(s)	862, 1103
HphI	GGTGA	4 cut(s)	16, 548, 1063, 1117
Hpy188I	TCNGA	5 cut(s)	91, 314, 711, 964, 1082
Hpy188III	TCNNGA	6 cut(s)	100, 326, 467, 568, 635, 1035
HpyCH4III	ACNGT	3 cut(s)	253, 560, 1115
HpyCH4IV	ACGT	3 cut(s)	429, 821, 946
HpyCH4V	TGCA	9 cut(s)	44, 403, 762, 818, 840, 907, 912, 940, 987
HpyF10VI	GCNNNNNNNGC	5 cut(s)	520, 599, 608, 743, 909
HpyF3I	CTNAG	5 cut(s)	438, 489, 542, 655, 884
HpySE526I	ACGT	3 cut(s)	429, 821, 946
Hsp92II	CATG	9 cut(s)	227, 268, 290, 329, 403, 476, 571, 606, 818
HspAI	GCGC	2 cut(s)	518, 954
Ksp22I	TGATCA	4 cut(s)	255, 564, 706, 964
Kzo9I	GATC	7 cut(s)	19, 151, 255, 564, 706, 858, 964
LpnPI	CCDG	7 cut(s)	524, 858, 875, 879, 906, 942, 1034
Lsp1109I	GCAGC	3 cut(s)	132, 507, 736
LweI	GCATC	2 cut(s)	319, 472
MaeI	CTAG	1 cut(s)	467
MaeII	ACGT	3 cut(s)	429, 821, 946
MaeIII	GTNAC	4 cut(s)	4, 417, 824, 1105
MalI	GATC	7 cut(s)	21, 153, 257, 566, 708, 860, 966
MboI	GATC	7 cut(s)	19, 151, 255, 564, 706, 858, 964
MboII	GAAGA	8 cut(s)	14, 45, 68, 354, 392, 628, 1015, 1066
MluCI	AATT	1 cut(s)	63
MluI	ACGCGT	1 cut(s)	423
MlyI	GAGTC	4 cut(s)	90, 647, 984, 1040
Mph1103I	ATGCAT	1 cut(s)	405
MroXI	GAANNNNTTC	1 cut(s)	244
MseI	TTAA	3 cut(s)	579, 996, 1117
MslI	CAYNNNNRTG	1 cut(s)	945
MspA1I	CMGCKG	1 cut(s)	442
MspCI	CTTAAG	1 cut(s)	995
MspI	CCGG	2 cut(s)	862, 1103
MspR9I	CCNGG	1 cut(s)	894
Mva1269I	GAATGC	1 cut(s)	940
MvaI	CCWGG	1 cut(s)	894
MvnI	CGCG	2 cut(s)	425, 679
MwoI	GCNNNNNNNGC	5 cut(s)	520, 599, 608, 743, 909
NdeII	GATC	7 cut(s)	19, 151, 255, 564, 706, 858, 964
NlaIII	CATG	9 cut(s)	227, 268, 290, 329, 403, 476, 571, 606, 818
NlaIV	GGNNCC	1 cut(s)	435
NmeAIII	GCCGAG	1 cut(s)	517
NmuCI	GTSAC	3 cut(s)	4, 417, 1105
NsbI	TGCGCA	1 cut(s)	955
NsiI	ATGCAT	1 cut(s)	405
NspI	RCATGY	1 cut(s)	268
PagI	TCATGA	2 cut(s)	325, 567
PctI	GAATGC	1 cut(s)	940
PdmI	GAANNNNTTC	1 cut(s)	244
PfeI	GAWTC	2 cut(s)	47, 851
Pfl23II	CGTACG	1 cut(s)	426
PfoI	TCCNGGA	1 cut(s)	892
PinAI	ACCGGT	1 cut(s)	1102
PkrI	GCNGC	3 cut(s)	122, 522, 726
PleI	GAGTC	4 cut(s)	90, 647, 983, 1039
PmaCI	CACGTG	1 cut(s)	947
PmlI	CACGTG	1 cut(s)	947
PpsI	GAGTC	4 cut(s)	90, 647, 983, 1039
Ppu21I	YACGTR	2 cut(s)	430, 947
Psp6I	CCWGG	1 cut(s)	892
PspCI	CACGTG	1 cut(s)	947
PspGI	CCWGG	1 cut(s)	892
PspLI	CGTACG	1 cut(s)	426
PspN4I	GGNNCC	1 cut(s)	435
PspPI	GGNCC	1 cut(s)	785
PstI	CTGCAG	1 cut(s)	46
PstNI	CAGNNNCTG	1 cut(s)	962
PvuII	CAGCTG	1 cut(s)	442
RsaI	GTAC	1 cut(s)	428
RsaNI	GTAC	1 cut(s)	427
RseI	CAYNNNNRTG	1 cut(s)	945
SaqAI	TTAA	3 cut(s)	579, 996, 1117
SatI	GCNGC	3 cut(s)	121, 521, 725
Sau3AI	GATC	7 cut(s)	19, 151, 255, 564, 706, 858, 964
Sau96I	GGNCC	1 cut(s)	785
SchI	GAGTC	4 cut(s)	90, 647, 984, 1040
ScrFI	CCNGG	1 cut(s)	894
SfaNI	GCATC	2 cut(s)	319, 472
SfcI	CTRYAG	1 cut(s)	42
SmiMI	CAYNNNNRTG	1 cut(s)	945
SmlI	CTYRAG	3 cut(s)	98, 635, 995
SmoI	CTYRAG	3 cut(s)	98, 635, 995
Sse9I	AATT	1 cut(s)	63
SsiI	CCGC	1 cut(s)	679
SspMI	CTAG	1 cut(s)	467
StyD4I	CCNGG	1 cut(s)	892
StyI	CCWWGG	1 cut(s)	235
TaaI	ACNGT	3 cut(s)	253, 560, 1115
TaiI	ACGT	3 cut(s)	432, 824, 949
TaqI	TCGA	4 cut(s)	128, 666, 973, 1034
TasI	AATT	1 cut(s)	63
TfiI	GAWTC	2 cut(s)	47, 851
Tru1I	TTAA	3 cut(s)	579, 996, 1117
Tru9I	TTAA	3 cut(s)	579, 996, 1117
TscAI	CASTG	3 cut(s)	256, 493, 861
TseFI	GTSAC	3 cut(s)	4, 417, 1105
TseI	GCWGC	3 cut(s)	120, 520, 724
Tsp45I	GTSAC	3 cut(s)	4, 417, 1105
TspDTI	ATGAA	7 cut(s)	14, 39, 401, 584, 629, 743, 846
TspGWI	ACGGA	2 cut(s)	183, 338
TspRI	CASTG	3 cut(s)	256, 493, 861
Vha464I	CTTAAG	1 cut(s)	995
XbaI	TCTAGA	1 cut(s)	466
XceI	RCATGY	1 cut(s)	268
XcmI	CCANNNNNNNNNTGG	1 cut(s)	493
XmnI	GAANNNNTTC	1 cut(s)	244
XspI	CTAG	1 cut(s)	467
Zsp2I	ATGCAT	1 cut(s)	405

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.