FvH4_1g05070

Belongs to the Frigida family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0013585
Physical Location & Seq
Forward (+)
2687353 .. 2690736
3384 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g05070.t3

Sequence Viewer

Length: 1713 bp
ATGGGGACCGAACTGGTGGTCGCGACGCACAGAGTCCAGAAATTCTTCGACGACCTAGAGGCGCAGAAGGCGATCCTCTCCACCTCCACGAAGCTCTACGCCACCATCTCCGATCACTTCACCGCCCTCCAGAAATCGCTCGCCGAGAAATTCAAATCCCTCGACTCCAAAATCGAATCCCTCGAGTCGCGTTCCCGCCAAACCCTAGAGTCCCTCGACGTCCGCGAGACCTCGCTCGCGGAGCGCGAAGCCTCCGCCGCGGCACGCGTCTCGGAGCAGAAATACGCCGCCTTGGCCGAGTTCGGAAGAATATTTCCGGCGAATTTGGACATCGCCGTGACGCTGAAATCGCTGTGTAGAAAAATGGACTCGGAGGGGCTGCTGAGGTTTATAGTTACGAAGCGGAAGGAGTCGGTGTCGCTGAGGGCGGAGATTGTTCCGGCAATGGCGGAGGCGGTGGACGCGCCGAGGCTGGTGTTGGATGCTTTGGAGGTGTTTCTGGAGACCAAGGCCAAGAAAGTTGGGGTCACCGATAAGCGGTGGGCCTGCGGGCTGCTGATTCAGGCTCTGTTTCCGGAGGCGCGGTCCGGTTCCCGTCCGAAAGGGCCGGCATTTGCTAGGAGTGTGGTGGAGAGAGCGGCGGGCGTTGCGGACAGGTGGAAGGGGCAGATGGATGAGCTGAGCAGGAGTGGTGGAGGGACATTGGGGGCGGCGGAGGCGGTGATGTTTGTGCAGATGGTGATTGGGTTTCAGTTGAAGGAGAAGTATGATGAGGAGTTTTATAAGAAGTTGGTGATGGAACATGCTGCTAGGAGAGATATGGCTAAGCTTGCCGGGGCACTACAATTCGGAGATATTGGAGATGTTATTGATGAGTTAGTGAAGAATGGAAAGGAGATAGAGGCAATATATTTTGCTTTTGAGTCTGGTTTGACCGAGAGGTTTCCTCCTATTTCCCTTCTCAAGTCCTATTTGAAGAACTCCAAGAAGAATGCTTCAACCATAATGAAGAATGGCAACAATAGTGTGGCTGCATCTGAGGAGTCGAGCACTTTGGAGTTGAATTCCATCAGAGCAGTTATCAAATGTGTAGAGGACCACAAACTTGAATCAGAATTTACACTCGACTCCCTAAGGAAGCGAGTCACTGCTTTAGAGAGAGCCAAAGCAGATAGAAAGAAGAATTCAGCTGCAGCTTCCAGTAAGTCTAATAACAAGCGTTCGTATGGTAGTGGAGGCGGCGGTGGCGGCCGTGGAGGAGTTGGATCATCATCTTCCCGCCCAGCAAAAGCTGCCAAGTATTCCAATGCACACCCATCATCTTTTAACCGGAGAATCCCAAATCCTCCTCCACAGCACAGCCCAGTAACAAGATATCCTGGACCGTACAATTACCCAAGCCCAACCGTAAATCCTCCTCCACAGCACAGCCCAGTAACAAGATATCCTGGGCCGTACAATTACCCAAGCCCAACCGTGTATGACGGTGCAACATCAGTCTCTTACGGAACCTCATATGGAGTAGCCCGTGCTCAAAGCCCTGTTGCTCTTCCACAACAACACATATATTCCCTATCTGGCGACAGCAGCATGGCTGCTAGTTCTGTATTCCGAAGTGGGGGTTCATATGGCGGCCAGACCAGTTATGGAGGGCCATACGATTATGCAAATGCGACACCACCGTCTTACCAACCGCCACCCTATCAACAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Frigida

Protein Analysis

571

Amino Acids

61.89

Weight (kDa)

9.4

Isoelectric Point (pI)

55.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Frigida PF07899 114 - 396 6.5e-90 Frigida-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013585)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g05070 FvH4_1g05070 FvH4_1g05070
malus_domestica MD02G1048900.v1.1 MD15G1187200.v1.1
prunus_persica Prupe.7G229200_v2.0.a1
pyrus_communis pycom02g04100 pycom15g16770
rosa_chinensis RchiOBHm_Chr2g0090711
rosa_laevigata RLG00000016136
rosa_multiflora Rmu_ssc0000367.1_g000001
rosa_roxburghii Rroxscaffold_2G00150890
rosa_rugosa Rorug02G0009900
rosa_samantha Rh2AG055900 Rh2BG054300 Rh2CG056600 Rh2DG055400
rosa_wichuraiana Rw2G004670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 783
AasI GACNNNNNNGTC 1 cut(s) 1681
AatII GACGTC 1 cut(s) 222
AccBSI CCGCTC 1 cut(s) 638
AccII CGCG 9 cut(s) 23, 190, 225, 239, 246, 260, 267, 464, 583
AccIII TCCGGA 1 cut(s) 574
AclWI GGATC 2 cut(s) 67, 1273
AcoI YGGCCR 3 cut(s) 294, 1249, 1633
AcsI RAATTY 6 cut(s) 41, 149, 322, 1063, 1115, 1183
AcyI GRCGYC 1 cut(s) 219
AfaI GTAC 2 cut(s) 1388, 1457
AfiI CCNNNNNNNGG 2 cut(s) 537, 1618
AflIII ACRYGT 1 cut(s) 265
AgsI TTSAA 6 cut(s) 154, 757, 976, 999, 1063, 1109
AjnI CCWGG 2 cut(s) 1378, 1447
AluBI AGCT 6 cut(s) 94, 679, 829, 1190, 1196, 1292
AluI AGCT 6 cut(s) 94, 679, 829, 1190, 1196, 1292
Alw21I GWGCWC 2 cut(s) 1052, 1534
Alw26I GTCTC 4 cut(s) 221, 274, 497, 1504
AlwI GGATC 2 cut(s) 67, 1273
AlwNI CAGNNNCTG 1 cut(s) 568
Ama87I CYCGRG 1 cut(s) 182
Aor13HI TCCGGA 1 cut(s) 574
AoxI GGCC 8 cut(s) 294, 510, 543, 605, 1249, 1451, 1633, 1652
ApeKI GCWGC 9 cut(s) 379, 553, 806, 1031, 1190, 1193, 1292, 1587, 1595
ApoI RAATTY 6 cut(s) 41, 149, 322, 1063, 1115, 1183
ArsI GACNNNNNNTTYG 1 cut(s) 35
Asp700I GAANNNNTTC 1 cut(s) 44
AspLEI GCGC 4 cut(s) 64, 246, 466, 583
AspS9I GGNCC 8 cut(s) 6, 543, 585, 605, 1096, 1382, 1451, 1652
AsuC2I CCSGG 1 cut(s) 835
AsuHPI GGTGA 5 cut(s) 112, 520, 733, 751, 805
AvaI CYCGRG 1 cut(s) 182
AvaII GGWCC 4 cut(s) 6, 585, 1096, 1382
AxyI CCTNAGG 1 cut(s) 1133
BaeGI GKGCMC 1 cut(s) 841
Bbv12I GWGCWC 2 cut(s) 1052, 1534
BbvCI CCTCAGC 2 cut(s) 383, 422
BbvI GCAGC 9 cut(s) 366, 540, 793, 1018, 1177, 1205, 1279, 1582, 1599
BccI CCATC 6 cut(s) 113, 664, 730, 790, 1076, 1324
BceAI ACGGC 3 cut(s) 320, 1236, 1438
BcgI CGANNNNNNTGC 2 cut(s) 252, 286
BciT130I CCWGG 2 cut(s) 1380, 1449
BcnI CCSGG 1 cut(s) 835
BcoDI GTCTC 4 cut(s) 221, 274, 497, 1504
BfaI CTAG 5 cut(s) 56, 206, 618, 810, 1599
BfmI CTRYAG 1 cut(s) 1191
BglI GCCNNNNNGGC 1 cut(s) 293
BlpI GCTNAGC 2 cut(s) 680, 825
Bme1390I CCNGG 3 cut(s) 835, 1380, 1449
Bme18I GGWCC 4 cut(s) 6, 585, 1096, 1382
BmeT110I CYCGRG 1 cut(s) 182
BmgT120I GGNCC 8 cut(s) 6, 543, 585, 605, 1096, 1382, 1451, 1652
BmiI GGNNCC 3 cut(s) 7, 592, 1510
BmrFI CCNGG 3 cut(s) 835, 1380, 1449
BmrI ACTGGG 2 cut(s) 1358, 1427
BmsI GCATC 2 cut(s) 472, 1043
BmuI ACTGGG 2 cut(s) 1358, 1427
BplI GAGNNNNNCTC 2 cut(s) 931, 963
BpmI CTGGAG 2 cut(s) 113, 521
Bpu10I CCTNAGC 2 cut(s) 383, 422
Bpu1102I GCTNAGC 2 cut(s) 680, 825
BpuEI CTTGAG 1 cut(s) 947
BpuMI CCSGG 1 cut(s) 835
BsaBI GATNNNNATC 1 cut(s) 1270
BsaHI GRCGYC 1 cut(s) 219
BsaI GGTCTC 2 cut(s) 221, 497
BsaJI CCNNGG 7 cut(s) 258, 291, 467, 507, 834, 1252, 1448
BsaWI WCCGGW 3 cut(s) 574, 587, 1329
BsaXI ACNNNNNCTCC 4 cut(s) 401, 431, 569, 599
Bsc4I CCNNNNNNNGG 2 cut(s) 537, 1618
Bse118I RCCGGY 1 cut(s) 607
Bse1I ACTGG 5 cut(s) 18, 1200, 1364, 1433, 1641
Bse21I CCTNAGG 1 cut(s) 1133
Bse3DI GCAATG 1 cut(s) 450
Bse8I GATNNNNATC 1 cut(s) 1270
BseAI TCCGGA 1 cut(s) 574
BseBI CCWGG 2 cut(s) 1380, 1449
BseDI CCNNGG 7 cut(s) 258, 291, 467, 507, 834, 1252, 1448
BseGI GGATG 2 cut(s) 487, 679
BseJI GATNNNNATC 1 cut(s) 1270
BseLI CCNNNNNNNGG 2 cut(s) 537, 1618
BseMI GCAATG 1 cut(s) 450
BseMII CTCAG 4 cut(s) 374, 413, 671, 1029
BseNI ACTGG 5 cut(s) 18, 1200, 1364, 1433, 1641
BseRI GAGGAG 5 cut(s) 788, 1055, 1272, 1338, 1407
BseSI GKGCMC 1 cut(s) 841
BseX3I CGGCCG 1 cut(s) 1249
BseXI GCAGC 9 cut(s) 366, 540, 793, 1018, 1177, 1205, 1279, 1582, 1599
BseYI CCCAGC 1 cut(s) 1282
BsgI GTGCAG 1 cut(s) 752
Bsh1236I CGCG 9 cut(s) 23, 190, 225, 239, 246, 260, 267, 464, 583
Bsh1285I CGRYCG 1 cut(s) 1252
BshFI GGCC 8 cut(s) 296, 512, 545, 607, 1251, 1453, 1635, 1654
BsiEI CGRYCG 1 cut(s) 1252
BsiHKAI GWGCWC 2 cut(s) 1052, 1534
BsiHKCI CYCGRG 1 cut(s) 182
BsiSI CCGG 7 cut(s) 317, 440, 575, 588, 608, 834, 1330
BslFI GGGAC 3 cut(s) 19, 196, 712
BslI CCNNNNNNNGG 2 cut(s) 537, 1618
BsmAI GTCTC 4 cut(s) 221, 274, 497, 1504
BsmBI CGTCTC 1 cut(s) 274
BsmFI GGGAC 3 cut(s) 19, 196, 712
BsmI GAATGC 1 cut(s) 997
BsnI GGCC 8 cut(s) 296, 512, 545, 607, 1251, 1453, 1635, 1654
Bso31I GGTCTC 2 cut(s) 221, 497
BsoBI CYCGRG 1 cut(s) 182
Bsp1286I GDGCHC 3 cut(s) 841, 1052, 1534
Bsp13I TCCGGA 1 cut(s) 574
Bsp143I GATC 3 cut(s) 72, 112, 1265
Bsp1720I GCTNAGC 2 cut(s) 680, 825
Bsp68I TCGCGA 1 cut(s) 23
BspANI GGCC 8 cut(s) 296, 512, 545, 607, 1251, 1453, 1635, 1654
BspCNI CTCAG 4 cut(s) 375, 414, 672, 1030
BspEI TCCGGA 1 cut(s) 574
BspFNI CGCG 9 cut(s) 23, 190, 225, 239, 246, 260, 267, 464, 583
BspLI GGNNCC 3 cut(s) 7, 592, 1510
BspMAI CTGCAG 1 cut(s) 1195
BspPI GGATC 2 cut(s) 67, 1273
BspQI GCTCTTC 1 cut(s) 1554
BspTNI GGTCTC 2 cut(s) 221, 497
BsrBI CCGCTC 1 cut(s) 638
BsrDI GCAATG 1 cut(s) 450
BsrFI RCCGGY 1 cut(s) 607
BsrI ACTGG 5 cut(s) 18, 1200, 1364, 1433, 1641
BssAI RCCGGY 1 cut(s) 607
BssECI CCNNGG 7 cut(s) 258, 291, 467, 507, 834, 1252, 1448
BssMI GATC 3 cut(s) 72, 112, 1265
BssNI GRCGYC 1 cut(s) 219
BssT1I CCWWGG 2 cut(s) 291, 507
Bst2UI CCWGG 2 cut(s) 1380, 1449
Bst4CI ACNGT 5 cut(s) 1386, 1408, 1477, 1487, 1683
Bst6I CTCTTC 1 cut(s) 1554
BstACI GRCGYC 1 cut(s) 219
BstAPI GCANNNNNTGC 1 cut(s) 1292
BstC8I GCNNGC 8 cut(s) 141, 237, 265, 547, 551, 609, 643, 831
BstDEI CTNAG 6 cut(s) 383, 422, 680, 825, 1038, 1133
BstDSI CCRYGG 2 cut(s) 258, 1252
BstEII GGTNACC 1 cut(s) 526
BstF5I GGATG 2 cut(s) 487, 679
BstFNI CGCG 9 cut(s) 23, 190, 225, 239, 246, 260, 267, 464, 583
BstHHI GCGC 4 cut(s) 64, 246, 466, 583
BstKTI GATC 3 cut(s) 75, 115, 1268
BstMAI GTCTC 4 cut(s) 221, 274, 497, 1504
BstMBI GATC 3 cut(s) 72, 112, 1265
BstMCI CGRYCG 1 cut(s) 1252
BstNI CCWGG 2 cut(s) 1380, 1449
BstNSI RCATGY 1 cut(s) 806
BstPI GGTNACC 1 cut(s) 526
BstSCI CCNGG 3 cut(s) 833, 1378, 1447
BstSFI CTRYAG 1 cut(s) 1191
BstSLI GKGCMC 1 cut(s) 841
BstUI CGCG 9 cut(s) 23, 190, 225, 239, 246, 260, 267, 464, 583
BstV1I GCAGC 9 cut(s) 366, 540, 793, 1018, 1177, 1205, 1279, 1582, 1599
BstZI CGGCCG 1 cut(s) 1249
Bsu36I CCTNAGG 1 cut(s) 1133
BsuRI GGCC 8 cut(s) 296, 512, 545, 607, 1251, 1453, 1635, 1654
BtgI CCRYGG 2 cut(s) 258, 1252
BtgZI GCGATG 1 cut(s) 316
BtsCI GGATG 2 cut(s) 487, 679
BtsI GCAGTG 1 cut(s) 1146
BtsIMutI CAGTG 1 cut(s) 1146
BtuMI TCGCGA 1 cut(s) 23
Cac8I GCNNGC 8 cut(s) 141, 237, 265, 547, 551, 609, 643, 831
CaiI CAGNNNCTG 1 cut(s) 568
CfoI GCGC 4 cut(s) 64, 246, 466, 583
Cfr10I RCCGGY 1 cut(s) 607
Cfr13I GGNCC 8 cut(s) 6, 543, 585, 605, 1096, 1382, 1451, 1652
Cfr42I CCGCGG 1 cut(s) 261
CpoI CGGWCCG 1 cut(s) 585
CseI GACGC 4 cut(s) 34, 256, 349, 470
Csp6I GTAC 2 cut(s) 1387, 1456
CspI CGGWCCG 1 cut(s) 585
CviAII CATG 2 cut(s) 803, 1591
CviQI GTAC 2 cut(s) 1387, 1456
DdeI CTNAG 6 cut(s) 383, 422, 680, 825, 1038, 1133
DpnI GATC 3 cut(s) 74, 114, 1267
DpnII GATC 3 cut(s) 72, 112, 1265
DrdI GACNNNNNNGTC 1 cut(s) 1681
DseDI GACNNNNNNGTC 1 cut(s) 1681
EaeI YGGCCR 3 cut(s) 294, 1249, 1633
EagI CGGCCG 1 cut(s) 1249
Eam1104I CTCTTC 1 cut(s) 1554
EarI CTCTTC 1 cut(s) 1554
EciI GGCGGA 4 cut(s) 244, 443, 464, 728
EclXI CGGCCG 1 cut(s) 1249
Eco130I CCWWGG 2 cut(s) 291, 507
Eco31I GGTCTC 2 cut(s) 221, 497
Eco32I GATATC 2 cut(s) 1376, 1445
Eco47I GGWCC 4 cut(s) 6, 585, 1096, 1382
Eco52I CGGCCG 1 cut(s) 1249
Eco81I CCTNAGG 1 cut(s) 1133
Eco88I CYCGRG 1 cut(s) 182
Eco91I GGTNACC 1 cut(s) 526
EcoO65I GGTNACC 1 cut(s) 526
EcoRI GAATTC 2 cut(s) 1063, 1183
EcoRII CCWGG 2 cut(s) 1378, 1447
EcoRV GATATC 2 cut(s) 1376, 1445
EcoT14I CCWWGG 2 cut(s) 291, 507
ErhI CCWWGG 2 cut(s) 291, 507
Esp3I CGTCTC 1 cut(s) 274
FaeI CATG 2 cut(s) 806, 1594
FaqI GGGAC 3 cut(s) 19, 196, 712
FatI CATG 2 cut(s) 802, 1590
FauI CCCGC 4 cut(s) 203, 542, 634, 1286
FauNDI CATATG 2 cut(s) 1516, 1627
FokI GGATG 2 cut(s) 494, 686
FspBI CTAG 5 cut(s) 56, 206, 618, 810, 1599
GlaI GCGC 4 cut(s) 63, 245, 465, 582
GsaI CCCAGC 1 cut(s) 1286
GsuI CTGGAG 2 cut(s) 113, 521
HaeIII GGCC 8 cut(s) 296, 512, 545, 607, 1251, 1453, 1635, 1654
HapII CCGG 7 cut(s) 317, 440, 575, 588, 608, 834, 1330
HgaI GACGC 4 cut(s) 34, 256, 349, 470
HhaI GCGC 4 cut(s) 64, 246, 466, 583
Hin1I GRCGYC 1 cut(s) 219
Hin1II CATG 2 cut(s) 806, 1594
Hin6I GCGC 4 cut(s) 62, 244, 464, 581
HinP1I GCGC 4 cut(s) 62, 244, 464, 581
HindIII AAGCTT 1 cut(s) 827
HpaII CCGG 7 cut(s) 317, 440, 575, 588, 608, 834, 1330
HphI GGTGA 5 cut(s) 112, 520, 733, 751, 805
Hpy166II GTNNAC 1 cut(s) 460
Hpy188III TCNNGA 5 cut(s) 22, 37, 130, 500, 575
Hpy8I GTNNAC 1 cut(s) 460
Hpy99I CGWCG 3 cut(s) 28, 53, 221
HpyAV CCTTC 5 cut(s) 61, 400, 655, 751, 968
HpyCH4III ACNGT 5 cut(s) 1386, 1408, 1477, 1487, 1683
HpyCH4IV ACGT 1 cut(s) 219
HpyCH4V TGCA 6 cut(s) 733, 1034, 1193, 1310, 1490, 1667
HpyF3I CTNAG 6 cut(s) 383, 422, 680, 825, 1038, 1133
HpySE526I ACGT 1 cut(s) 219
Hsp92I GRCGYC 1 cut(s) 219
Hsp92II CATG 2 cut(s) 806, 1594
HspAI GCGC 4 cut(s) 62, 244, 464, 581
Kpn2I TCCGGA 1 cut(s) 574
KroI GCCGGC 1 cut(s) 607
KroNI GCCGGC 1 cut(s) 609
KspI CCGCGG 1 cut(s) 261
Kzo9I GATC 3 cut(s) 72, 112, 1265
LguI GCTCTTC 1 cut(s) 1554
LmnI GCTCC 2 cut(s) 241, 274
Lsp1109I GCAGC 9 cut(s) 366, 540, 793, 1018, 1177, 1205, 1279, 1582, 1599
LweI GCATC 2 cut(s) 472, 1043
MaeI CTAG 5 cut(s) 56, 206, 618, 810, 1599
MaeII ACGT 1 cut(s) 219
MaeIII GTNAC 6 cut(s) 337, 394, 526, 1144, 1366, 1435
MalI GATC 3 cut(s) 74, 114, 1267
MbiI CCGCTC 1 cut(s) 638
MboI GATC 3 cut(s) 72, 112, 1265
MboII GAAGA 9 cut(s) 37, 318, 895, 988, 1000, 1021, 1192, 1266, 1541
MhlI GDGCHC 3 cut(s) 841, 1052, 1534
MluCI AATT 9 cut(s) 41, 149, 322, 845, 1063, 1115, 1183, 1390, 1459
MluI ACGCGT 1 cut(s) 265
MmeI TCCRAC 2 cut(s) 459, 1243
MroI TCCGGA 1 cut(s) 574
MroNI GCCGGC 1 cut(s) 607
MroXI GAANNNNTTC 1 cut(s) 44
MseI TTAA 1 cut(s) 1326
MslI CAYNNNNRTG 1 cut(s) 335
MspA1I CMGCKG 2 cut(s) 260, 1190
MspI CCGG 7 cut(s) 317, 440, 575, 588, 608, 834, 1330
MspR9I CCNGG 3 cut(s) 835, 1380, 1449
Mva1269I GAATGC 1 cut(s) 997
MvaI CCWGG 2 cut(s) 1380, 1449
MvnI CGCG 9 cut(s) 23, 190, 225, 239, 246, 260, 267, 464, 583
NaeI GCCGGC 1 cut(s) 609
NciI CCSGG 1 cut(s) 835
NdeI CATATG 2 cut(s) 1516, 1627
NdeII GATC 3 cut(s) 72, 112, 1265
NgoMIV GCCGGC 1 cut(s) 607
NlaIII CATG 2 cut(s) 806, 1594
NlaIV GGNNCC 3 cut(s) 7, 592, 1510
NmeAIII GCCGAG 3 cut(s) 169, 322, 492
NmuCI GTSAC 3 cut(s) 337, 526, 1144
NruI TCGCGA 1 cut(s) 23
NspI RCATGY 1 cut(s) 806
PaeR7I CTCGAG 1 cut(s) 182
PciSI GCTCTTC 1 cut(s) 1554
PcsI WCGNNNNNNNCGW 3 cut(s) 180, 222, 243
PctI GAATGC 1 cut(s) 997
PdiI GCCGGC 1 cut(s) 609
PdmI GAANNNNTTC 1 cut(s) 44
PfeI GAWTC 4 cut(s) 176, 559, 1109, 1335
PfoI TCCNGGA 1 cut(s) 1378
PsiI TTATAA 1 cut(s) 783
Psp6I CCWGG 2 cut(s) 1378, 1447
PspEI GGTNACC 1 cut(s) 526
PspFI CCCAGC 1 cut(s) 1282
PspGI CCWGG 2 cut(s) 1378, 1447
PspN4I GGNNCC 3 cut(s) 7, 592, 1510
PspPI GGNCC 8 cut(s) 6, 543, 585, 605, 1096, 1382, 1451, 1652
PspXI VCTCGAGB 1 cut(s) 182
PstI CTGCAG 1 cut(s) 1195
PstNI CAGNNNCTG 1 cut(s) 568
PvuII CAGCTG 1 cut(s) 1190
RruI TCGCGA 1 cut(s) 23
RsaI GTAC 2 cut(s) 1388, 1457
RsaNI GTAC 2 cut(s) 1387, 1456
RseI CAYNNNNRTG 1 cut(s) 335
Rsr2I CGGWCCG 1 cut(s) 585
RsrII CGGWCCG 1 cut(s) 585
SacII CCGCGG 1 cut(s) 261
SapI GCTCTTC 1 cut(s) 1554
SaqAI TTAA 1 cut(s) 1326
Sau3AI GATC 3 cut(s) 72, 112, 1265
Sau96I GGNCC 8 cut(s) 6, 543, 585, 605, 1096, 1382, 1451, 1652
ScrFI CCNGG 3 cut(s) 835, 1380, 1449
SduI GDGCHC 3 cut(s) 841, 1052, 1534
SfaNI GCATC 2 cut(s) 472, 1043
SfcI CTRYAG 1 cut(s) 1191
Sfr274I CTCGAG 1 cut(s) 182
Sfr303I CCGCGG 1 cut(s) 261
SgrBI CCGCGG 1 cut(s) 261
SinI GGWCC 4 cut(s) 6, 585, 1096, 1382
SlaI CTCGAG 1 cut(s) 182
SmiMI CAYNNNNRTG 1 cut(s) 335
SmlI CTYRAG 2 cut(s) 182, 962
SmoI CTYRAG 2 cut(s) 182, 962
Sse9I AATT 9 cut(s) 41, 149, 322, 845, 1063, 1115, 1183, 1390, 1459
SspI AATATT 1 cut(s) 312
SspMI CTAG 5 cut(s) 56, 206, 618, 810, 1599
StyD4I CCNGG 3 cut(s) 833, 1378, 1447
StyI CCWWGG 2 cut(s) 291, 507
TaaI ACNGT 5 cut(s) 1386, 1408, 1477, 1487, 1683
TaiI ACGT 1 cut(s) 222
TaqI TCGA 7 cut(s) 48, 162, 174, 183, 216, 1046, 1125
TaqII GACCGA 2 cut(s) 23, 950
TasI AATT 9 cut(s) 41, 149, 322, 845, 1063, 1115, 1183, 1390, 1459
TauI GCSGC 8 cut(s) 260, 263, 290, 641, 713, 1242, 1251, 1635
TfiI GAWTC 4 cut(s) 176, 559, 1109, 1335
Tru1I TTAA 1 cut(s) 1326
Tru9I TTAA 1 cut(s) 1326
TscAI CASTG 1 cut(s) 1153
TseFI GTSAC 3 cut(s) 337, 526, 1144
TseI GCWGC 9 cut(s) 379, 553, 806, 1031, 1190, 1193, 1292, 1587, 1595
Tsp45I GTSAC 3 cut(s) 337, 526, 1144
TspDTI ATGAA 2 cut(s) 1022, 1614
TspGWI ACGGA 1 cut(s) 1521
TspRI CASTG 1 cut(s) 1153
VpaK11BI GGWCC 4 cut(s) 6, 585, 1096, 1382
XapI RAATTY 6 cut(s) 41, 149, 322, 1063, 1115, 1183
XceI RCATGY 1 cut(s) 806
XcmI CCANNNNNNNNNTGG 1 cut(s) 1643
XhoI CTCGAG 1 cut(s) 182
XmnI GAANNNNTTC 1 cut(s) 44
XspI CTAG 5 cut(s) 56, 206, 618, 810, 1599
ZraI GACGTC 1 cut(s) 220
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.