MD15G1187200.v1.1

Belongs to the Frigida family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0013585
Physical Location & Seq
Forward (+)
14786224 .. 14789114
2891 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1187200.v1.1.491

Sequence Viewer

Length: 1620 bp
ATGGGGACCGAACTGGTGGTCACAACGGACAGAGTCCAGAAGTTCTTTGGCGACCTGGACGAGCAGAGGGCGATACTCTCCACCTCCACCAAGCTTTTCATAACCCTCTCCGACCACTTTGATTCCCTCCAGAAATCTATCTCCGAGAAATCCTATTCCCTCGAATCCAAAACCCAATCCCTCGAATCCCGTACCCGCGAAAACTCACACTCTCTCGACCACCGGGAGGCTTCCATCCCGGAGCGCGGGTCCTCCGCCGCCGCCAGAATCGAGGAGCAGAAAGCCGCGGCCTTGGCAGAGGTGGAGAAGAAAGCATCCGGCGATTTGGATTTGCCGGAGACCCTGAAATCGTTTTGCAGGAAAATGGACTCGCAGGGGTTGGTGAAGTTCATCGTTTCGAAGCGGAAGGAGTCTATATCGCTCAGGGCGGAGATTGTGCAGGCAATTGCGGAGGCCGTGGACCCATCAAGATTGGTGCTTGATGCATTGGAAGAGTTTTTGGATTCTAAAGCCAAGAAATTGGGGGTTACCGATAAGCGGTGGGCGTGCGGGCTGTTAGTTCAAGCTCTGTTTCCGGAGGGTAAGGCCGGCCCAAAAGGGCCGGAGTTTTCCAGGAGCATGGTGGAGAGAGCGGCCGGGATTGTAGATACGTGGAAGGCGCGTATGGATGGAGATTCAAACGGTGGTGGCTGGACGTTGGGGGCTGCGGAGGCGGTGATGTTTGTGCAAATGCTTGTTGGGTTTCGATTGAAGGAGAAGTTCGGTGAGGAGTTCTTTCGGAAGTTGGTAATGGAGCACGCAGCGAGGAGGGATATGGCAAAGCTCGCAGGGGCTTTAGAACTCGGAGAAAAAATGGGAGATGTCATTGATGAGTTAGTGAAGAATGGCAAGGAGATAGAGGCCGTATATTTTGCTTCTGAGTCTGGTTTAACTGAGAGTTTTCCTCCTGTTTCTCTGCTCAAATCGTATCTCAGGAACTCCAGAAGGAGTGCTACAATCATATTGAAGAACGGAAATAATAGTGTGGCTGCAACTGAGGAGTCGAGCACTTTGGAGTTGAATTCCATCAAAGCAATCATCAAATGTGTAGAAGACCACAAGCTTGAATCAGAGTTTTCTCTTGAGAGCTTAAGAAAGCGGGCGACTCATTTGGAGAAAGCAAAGACAGAAAGGAAGAAGAGCTCAGCATCTTCCAGCAAGCCCCATAATAATAAGCGAGCCTACGGTGGGGGTGGGGGTGGCGGCCAAGGGGTAGGACAGTCGTCATTCCGCCCTGCCAAAGCAGCCAAGTTTTCCAATTCCTACCCCTCCTTTACCAGGAGGAACCCAAATCCTCTTCCACAACATAGCCCCCCAACAAGATATTCTGGTCCTTACAGTTACCCGAGCCAAAGTGTGTTCGACGGTCCGACAGCACCATCGTATGGATCCACATATGGAGCACCCCCTGCTCAAAGCCCCGCTGCTCTTCCTCAACACTACTCCCTCCCTGGGGACAGCATGGGCGCTGCCAGGTTTGGAAGCAGTGGGGCTTATGGTGGCGGCCAGACCAACTACGTCCCATATAATTACTCGAATGTTGCTCCACCGGCATACCAGCCTCCCTCGTATCCGCAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Frigida

Protein Analysis

540

Amino Acids

58.59

Weight (kDa)

9.02

Isoelectric Point (pI)

53.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Frigida PF07899 113 - 395 2.1e-93 Frigida-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013585)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g05070 FvH4_1g05070 FvH4_1g05070
malus_domestica MD02G1048900.v1.1 MD15G1187200.v1.1
prunus_persica Prupe.7G229200_v2.0.a1
pyrus_communis pycom02g04100 pycom15g16770
rosa_chinensis RchiOBHm_Chr2g0090711
rosa_laevigata RLG00000016136
rosa_multiflora Rmu_ssc0000367.1_g000001
rosa_roxburghii Rroxscaffold_2G00150890
rosa_rugosa Rorug02G0009900
rosa_samantha Rh2AG055900 Rh2BG054300 Rh2CG056600 Rh2DG055400
rosa_wichuraiana Rw2G004670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1424
AccBSI CCGCTC 1 cut(s) 632
AccII CGCG 4 cut(s) 198, 246, 287, 661
AccIII TCCGGA 1 cut(s) 574
AclWI GGATC 2 cut(s) 1422, 1435
AcoI YGGCCR 3 cut(s) 633, 1243, 1543
AcsI RAATTY 1 cut(s) 1060
AfaI GTAC 1 cut(s) 193
AfiI CCNNNNNNNGG 8 cut(s) 226, 245, 537, 1227, 1317, 1424, 1491, 1492
AflII CTTAAG 1 cut(s) 1129
AgsI TTSAA 6 cut(s) 563, 678, 751, 1006, 1060, 1106
AjnI CCWGG 5 cut(s) 54, 611, 1316, 1489, 1511
AjuI GAANNNNNNNTTGG 2 cut(s) 1348, 1380
AluBI AGCT 6 cut(s) 94, 566, 823, 1102, 1128, 1182
AluI AGCT 6 cut(s) 94, 566, 823, 1102, 1128, 1182
Alw21I GWGCWC 4 cut(s) 798, 1049, 1184, 1444
Alw26I GTCTC 1 cut(s) 332
AlwI GGATC 2 cut(s) 1422, 1435
Ama87I CYCGRG 1 cut(s) 1384
Aor13HI TCCGGA 1 cut(s) 574
AoxI GGCC 9 cut(s) 288, 453, 585, 589, 599, 633, 900, 1243, 1543
ApeKI GCWGC 6 cut(s) 704, 800, 1028, 1283, 1463, 1508
ApoI RAATTY 1 cut(s) 1060
ArsI GACNNNNNNTTYG 1 cut(s) 35
AspLEI GCGC 3 cut(s) 246, 661, 1508
AspS9I GGNCC 7 cut(s) 6, 249, 460, 590, 599, 1370, 1406
AsuC2I CCSGG 3 cut(s) 224, 239, 637
AsuHPI GGTGA 3 cut(s) 394, 727, 776
AsuII TTCGAA 1 cut(s) 398
AvaI CYCGRG 1 cut(s) 1384
AvaII GGWCC 5 cut(s) 6, 249, 460, 1370, 1406
BamHI GGATCC 1 cut(s) 1427
BanII GRGCYC 1 cut(s) 1184
BarI GAAGNNNNNNTAC 2 cut(s) 976, 1008
BbsI GAAGAC 1 cut(s) 1098
Bbv12I GWGCWC 4 cut(s) 798, 1049, 1184, 1444
BbvI GCAGC 6 cut(s) 691, 812, 1015, 1295, 1450, 1495
BccI CCATC 5 cut(s) 242, 472, 662, 1073, 1426
BceAI ACGGC 2 cut(s) 440, 887
BciT130I CCWGG 5 cut(s) 56, 613, 1318, 1491, 1513
BciVI GTATCC 1 cut(s) 1620
BcnI CCSGG 3 cut(s) 224, 239, 637
BcoDI GTCTC 1 cut(s) 332
BfoI RGCGCY 1 cut(s) 1509
BfrI CTTAAG 1 cut(s) 1129
BfuI GTATCC 1 cut(s) 1620
BlpI GCTNAGC 1 cut(s) 1183
Bme1390I CCNGG 8 cut(s) 56, 224, 239, 613, 637, 1318, 1491, 1513
Bme18I GGWCC 5 cut(s) 6, 249, 460, 1370, 1406
BmeT110I CYCGRG 1 cut(s) 1384
BmgT120I GGNCC 7 cut(s) 6, 249, 460, 590, 599, 1370, 1406
BmiI GGNNCC 5 cut(s) 7, 250, 462, 1325, 1429
BmrFI CCNGG 8 cut(s) 56, 224, 239, 613, 637, 1318, 1491, 1513
BmsI GCATC 3 cut(s) 323, 472, 1196
BoxI GACNNNNGTC 1 cut(s) 1261
BpiI GAAGAC 1 cut(s) 1098
BplI GAGNNNNNCTC 2 cut(s) 928, 960
BpmI CTGGAG 2 cut(s) 113, 964
Bpu10I CCTNAGC 1 cut(s) 422
Bpu1102I GCTNAGC 1 cut(s) 1183
Bpu14I TTCGAA 1 cut(s) 398
BpuEI CTTGAG 1 cut(s) 1142
BpuMI CCSGG 3 cut(s) 224, 239, 637
BsaAI YACGTR 1 cut(s) 651
BsaI GGTCTC 1 cut(s) 332
BsaJI CCNNGG 6 cut(s) 285, 291, 456, 1246, 1489, 1490
BsaWI WCCGGW 1 cut(s) 574
BsaXI ACNNNNNCTCC 2 cut(s) 233, 263
Bsc4I CCNNNNNNNGG 8 cut(s) 226, 245, 537, 1227, 1317, 1424, 1491, 1492
Bse118I RCCGGY 2 cut(s) 587, 1588
Bse1I ACTGG 1 cut(s) 18
BseAI TCCGGA 1 cut(s) 574
BseBI CCWGG 5 cut(s) 56, 613, 1318, 1491, 1513
BseDI CCNNGG 6 cut(s) 285, 291, 456, 1246, 1489, 1490
BseGI GGATG 3 cut(s) 234, 314, 673
BseLI CCNNNNNNNGG 8 cut(s) 226, 245, 537, 1227, 1317, 1424, 1491, 1492
BseMII CTCAG 6 cut(s) 436, 909, 924, 985, 1026, 1197
BseNI ACTGG 1 cut(s) 18
BseRI GAGGAG 4 cut(s) 287, 782, 820, 1052
BseX3I CGGCCG 1 cut(s) 633
BseXI GCAGC 6 cut(s) 691, 812, 1015, 1295, 1450, 1495
BsgI GTGCAG 1 cut(s) 458
Bsh1236I CGCG 4 cut(s) 198, 246, 287, 661
Bsh1285I CGRYCG 1 cut(s) 636
BshFI GGCC 9 cut(s) 290, 455, 587, 591, 601, 635, 902, 1245, 1545
BsiEI CGRYCG 1 cut(s) 636
BsiHKAI GWGCWC 4 cut(s) 798, 1049, 1184, 1444
BsiHKCI CYCGRG 1 cut(s) 1384
BsiSI CCGG 9 cut(s) 223, 239, 318, 335, 575, 588, 602, 636, 1589
BslFI GGGAC 3 cut(s) 19, 1508, 1544
BslI CCNNNNNNNGG 8 cut(s) 226, 245, 537, 1227, 1317, 1424, 1491, 1492
BsmAI GTCTC 1 cut(s) 332
BsmFI GGGAC 3 cut(s) 19, 1508, 1544
BsnI GGCC 9 cut(s) 290, 455, 587, 591, 601, 635, 902, 1245, 1545
Bso31I GGTCTC 1 cut(s) 332
BsoBI CYCGRG 1 cut(s) 1384
Bsp119I TTCGAA 1 cut(s) 398
Bsp1286I GDGCHC 4 cut(s) 798, 1049, 1184, 1444
Bsp13I TCCGGA 1 cut(s) 574
Bsp143I GATC 1 cut(s) 1427
Bsp1720I GCTNAGC 1 cut(s) 1183
BspANI GGCC 9 cut(s) 290, 455, 587, 591, 601, 635, 902, 1245, 1545
BspCNI CTCAG 6 cut(s) 435, 910, 925, 984, 1027, 1196
BspEI TCCGGA 1 cut(s) 574
BspFNI CGCG 4 cut(s) 198, 246, 287, 661
BspLI GGNNCC 5 cut(s) 7, 250, 462, 1325, 1429
BspPI GGATC 2 cut(s) 1422, 1435
BspQI GCTCTTC 2 cut(s) 1172, 1473
BspT104I TTCGAA 1 cut(s) 398
BspTI CTTAAG 1 cut(s) 1129
BspTNI GGTCTC 1 cut(s) 332
BsrBI CCGCTC 1 cut(s) 632
BsrFI RCCGGY 2 cut(s) 587, 1588
BsrI ACTGG 1 cut(s) 18
BssAI RCCGGY 2 cut(s) 587, 1588
BssECI CCNNGG 6 cut(s) 285, 291, 456, 1246, 1489, 1490
BssMI GATC 1 cut(s) 1427
BssT1I CCWWGG 2 cut(s) 291, 1246
Bst2UI CCWGG 5 cut(s) 56, 613, 1318, 1491, 1513
Bst4CI ACNGT 5 cut(s) 683, 1226, 1260, 1379, 1406
Bst6I CTCTTC 4 cut(s) 486, 1172, 1341, 1473
BstAFI CTTAAG 1 cut(s) 1129
BstAPI GCANNNNNTGC 1 cut(s) 1448
BstBAI YACGTR 1 cut(s) 651
BstBI TTCGAA 1 cut(s) 398
BstC8I GCNNGC 9 cut(s) 441, 547, 551, 589, 798, 825, 1140, 1199, 1218
BstDEI CTNAG 6 cut(s) 422, 918, 933, 971, 1035, 1183
BstDSI CCRYGG 2 cut(s) 285, 456
BstEII GGTNACC 1 cut(s) 526
BstENI CCTNNNNNAGG 1 cut(s) 1315
BstF5I GGATG 3 cut(s) 234, 314, 673
BstFNI CGCG 4 cut(s) 198, 246, 287, 661
BstH2I RGCGCY 1 cut(s) 1509
BstHHI GCGC 3 cut(s) 246, 661, 1508
BstKTI GATC 1 cut(s) 1430
BstMAI GTCTC 1 cut(s) 332
BstMBI GATC 1 cut(s) 1427
BstMCI CGRYCG 1 cut(s) 636
BstMWI GCNNNNNNNGC 6 cut(s) 293, 710, 824, 1283, 1448, 1589
BstNI CCWGG 5 cut(s) 56, 613, 1318, 1491, 1513
BstPAI GACNNNNGTC 1 cut(s) 1261
BstPI GGTNACC 1 cut(s) 526
BstSCI CCNGG 8 cut(s) 54, 222, 237, 611, 635, 1316, 1489, 1511
BstUI CGCG 4 cut(s) 198, 246, 287, 661
BstV1I GCAGC 6 cut(s) 691, 812, 1015, 1295, 1450, 1495
BstV2I GAAGAC 1 cut(s) 1098
BstX2I RGATCY 1 cut(s) 1427
BstXI CCANNNNNNTGG 2 cut(s) 520, 619
BstYI RGATCY 1 cut(s) 1427
BstZI CGGCCG 1 cut(s) 633
BsuI GTATCC 1 cut(s) 1620
BsuRI GGCC 9 cut(s) 290, 455, 587, 591, 601, 635, 902, 1245, 1545
BtgI CCRYGG 2 cut(s) 285, 456
BtsCI GGATG 3 cut(s) 234, 314, 673
BtsI GCAGTG 1 cut(s) 1531
BtsIMutI CAGTG 1 cut(s) 1531
Cac8I GCNNGC 9 cut(s) 441, 547, 551, 589, 798, 825, 1140, 1199, 1218
CfoI GCGC 3 cut(s) 246, 661, 1508
Cfr10I RCCGGY 2 cut(s) 587, 1588
Cfr13I GGNCC 7 cut(s) 6, 249, 460, 590, 599, 1370, 1406
Cfr42I CCGCGG 1 cut(s) 288
CpoI CGGWCCG 1 cut(s) 1406
Csp6I GTAC 1 cut(s) 192
CspI CGGWCCG 1 cut(s) 1406
CviAII CATG 2 cut(s) 619, 1501
CviQI GTAC 1 cut(s) 192
DdeI CTNAG 6 cut(s) 422, 918, 933, 971, 1035, 1183
DpnI GATC 1 cut(s) 1429
DpnII GATC 1 cut(s) 1427
EaeI YGGCCR 3 cut(s) 633, 1243, 1543
EagI CGGCCG 1 cut(s) 633
Eam1104I CTCTTC 4 cut(s) 486, 1172, 1341, 1473
EarI CTCTTC 4 cut(s) 486, 1172, 1341, 1473
EciI GGCGGA 3 cut(s) 244, 443, 1259
Ecl136II GAGCTC 1 cut(s) 1182
EclXI CGGCCG 1 cut(s) 633
Eco130I CCWWGG 2 cut(s) 291, 1246
Eco24I GRGCYC 1 cut(s) 1184
Eco31I GGTCTC 1 cut(s) 332
Eco47I GGWCC 5 cut(s) 6, 249, 460, 1370, 1406
Eco52I CGGCCG 1 cut(s) 633
Eco53kI GAGCTC 1 cut(s) 1182
Eco88I CYCGRG 1 cut(s) 1384
Eco91I GGTNACC 1 cut(s) 526
EcoICRI GAGCTC 1 cut(s) 1182
EcoNI CCTNNNNNAGG 1 cut(s) 1315
EcoO109I RGGNCCY 1 cut(s) 249
EcoO65I GGTNACC 1 cut(s) 526
EcoRI GAATTC 1 cut(s) 1060
EcoRII CCWGG 5 cut(s) 54, 611, 1316, 1489, 1511
EcoT14I CCWWGG 2 cut(s) 291, 1246
EcoT22I ATGCAT 1 cut(s) 487
EcoT38I GRGCYC 1 cut(s) 1184
ErhI CCWWGG 2 cut(s) 291, 1246
FaeI CATG 2 cut(s) 622, 1504
FaqI GGGAC 3 cut(s) 19, 1508, 1544
FatI CATG 2 cut(s) 618, 1500
FauI CCCGC 5 cut(s) 203, 239, 542, 1131, 1468
FauNDI CATATG 1 cut(s) 1435
FokI GGATG 3 cut(s) 221, 301, 680
FriOI GRGCYC 1 cut(s) 1184
FseI GGCCGGCC 1 cut(s) 591
GlaI GCGC 3 cut(s) 245, 660, 1507
GsuI CTGGAG 2 cut(s) 113, 964
HaeII RGCGCY 1 cut(s) 1509
HaeIII GGCC 9 cut(s) 290, 455, 587, 591, 601, 635, 902, 1245, 1545
HapII CCGG 9 cut(s) 223, 239, 318, 335, 575, 588, 602, 636, 1589
HhaI GCGC 3 cut(s) 246, 661, 1508
Hin1II CATG 2 cut(s) 622, 1504
Hin6I GCGC 3 cut(s) 244, 659, 1506
HinP1I GCGC 3 cut(s) 244, 659, 1506
HindIII AAGCTT 2 cut(s) 92, 1100
HpaII CCGG 9 cut(s) 223, 239, 318, 335, 575, 588, 602, 636, 1589
HphI GGTGA 3 cut(s) 394, 727, 776
Hpy166II GTNNAC 1 cut(s) 460
Hpy188I TCNGA 7 cut(s) 112, 145, 780, 845, 919, 1111, 1410
Hpy188III TCNNGA 8 cut(s) 37, 130, 215, 468, 575, 973, 981, 1121
Hpy8I GTNNAC 1 cut(s) 460
Hpy99I CGWCG 1 cut(s) 1406
HpyAV CCTTC 4 cut(s) 400, 649, 745, 978
HpyCH4III ACNGT 5 cut(s) 683, 1226, 1260, 1379, 1406
HpyCH4IV ACGT 3 cut(s) 650, 695, 1557
HpyCH4V TGCA 5 cut(s) 357, 439, 485, 727, 1031
HpyF10VI GCNNNNNNNGC 6 cut(s) 293, 710, 824, 1283, 1448, 1589
HpyF3I CTNAG 6 cut(s) 422, 918, 933, 971, 1035, 1183
HpySE526I ACGT 3 cut(s) 650, 695, 1557
Hsp92II CATG 2 cut(s) 622, 1504
HspAI GCGC 3 cut(s) 244, 659, 1506
Kpn2I TCCGGA 1 cut(s) 574
KroI GCCGGC 1 cut(s) 587
KroNI GCCGGC 1 cut(s) 589
KspI CCGCGG 1 cut(s) 288
Kzo9I GATC 1 cut(s) 1427
LguI GCTCTTC 2 cut(s) 1172, 1473
LmnI GCTCC 6 cut(s) 241, 274, 615, 793, 1439, 1588
Lsp1109I GCAGC 6 cut(s) 691, 812, 1015, 1295, 1450, 1495
LweI GCATC 3 cut(s) 323, 472, 1196
MaeII ACGT 3 cut(s) 650, 695, 1557
MaeIII GTNAC 3 cut(s) 19, 526, 1379
MalI GATC 1 cut(s) 1429
MbiI CCGCTC 1 cut(s) 632
MboI GATC 1 cut(s) 1427
MfeI CAATTG 1 cut(s) 444
MflI RGATCY 1 cut(s) 1427
MhlI GDGCHC 4 cut(s) 798, 1049, 1184, 1444
MluCI AATT 5 cut(s) 444, 518, 1060, 1297, 1567
MlyI GAGTC 6 cut(s) 42, 362, 419, 929, 1049, 1138
MmeI TCCRAC 2 cut(s) 135, 1433
Mph1103I ATGCAT 1 cut(s) 487
MroI TCCGGA 1 cut(s) 574
MroNI GCCGGC 1 cut(s) 587
MseI TTAA 2 cut(s) 929, 1130
MspA1I CMGCKG 2 cut(s) 287, 1463
MspCI CTTAAG 1 cut(s) 1129
MspI CCGG 9 cut(s) 223, 239, 318, 335, 575, 588, 602, 636, 1589
MspR9I CCNGG 8 cut(s) 56, 224, 239, 613, 637, 1318, 1491, 1513
MunI CAATTG 1 cut(s) 444
MvaI CCWGG 5 cut(s) 56, 613, 1318, 1491, 1513
MvnI CGCG 4 cut(s) 198, 246, 287, 661
MwoI GCNNNNNNNGC 6 cut(s) 293, 710, 824, 1283, 1448, 1589
NaeI GCCGGC 1 cut(s) 589
NciI CCSGG 3 cut(s) 224, 239, 637
NdeI CATATG 1 cut(s) 1435
NdeII GATC 1 cut(s) 1427
NgoMIV GCCGGC 1 cut(s) 587
NlaIII CATG 2 cut(s) 622, 1504
NlaIV GGNNCC 5 cut(s) 7, 250, 462, 1325, 1429
NmuCI GTSAC 1 cut(s) 19
NsiI ATGCAT 1 cut(s) 487
NspV TTCGAA 1 cut(s) 398
PasI CCCWGGG 1 cut(s) 1490
PciSI GCTCTTC 2 cut(s) 1172, 1473
PdiI GCCGGC 1 cut(s) 589
PfeI GAWTC 7 cut(s) 122, 164, 185, 267, 503, 674, 1106
PflFI GACNNNGTC 1 cut(s) 32
PflMI CCANNNNNTGG 1 cut(s) 1424
PfoI TCCNGGA 2 cut(s) 237, 611
PleI GAGTC 6 cut(s) 41, 362, 418, 928, 1048, 1138
PpsI GAGTC 6 cut(s) 41, 362, 418, 928, 1048, 1138
Ppu21I YACGTR 1 cut(s) 651
PpuMI RGGWCCY 1 cut(s) 249
PshAI GACNNNNGTC 1 cut(s) 1261
Psp124BI GAGCTC 1 cut(s) 1184
Psp5II RGGWCCY 1 cut(s) 249
Psp6I CCWGG 5 cut(s) 54, 611, 1316, 1489, 1511
PspEI GGTNACC 1 cut(s) 526
PspGI CCWGG 5 cut(s) 54, 611, 1316, 1489, 1511
PspN4I GGNNCC 5 cut(s) 7, 250, 462, 1325, 1429
PspPI GGNCC 7 cut(s) 6, 249, 460, 590, 599, 1370, 1406
PspPPI RGGWCCY 1 cut(s) 249
PsuI RGATCY 1 cut(s) 1427
PsyI GACNNNGTC 1 cut(s) 32
RigI GGCCGGCC 1 cut(s) 591
RsaI GTAC 1 cut(s) 193
RsaNI GTAC 1 cut(s) 192
Rsr2I CGGWCCG 1 cut(s) 1406
RsrII CGGWCCG 1 cut(s) 1406
SacI GAGCTC 1 cut(s) 1184
SacII CCGCGG 1 cut(s) 288
SapI GCTCTTC 2 cut(s) 1172, 1473
SaqAI TTAA 2 cut(s) 929, 1130
Sau3AI GATC 1 cut(s) 1427
Sau96I GGNCC 7 cut(s) 6, 249, 460, 590, 599, 1370, 1406
SchI GAGTC 6 cut(s) 42, 362, 419, 929, 1049, 1138
ScrFI CCNGG 8 cut(s) 56, 224, 239, 613, 637, 1318, 1491, 1513
SduI GDGCHC 4 cut(s) 798, 1049, 1184, 1444
SfaNI GCATC 3 cut(s) 323, 472, 1196
Sfr303I CCGCGG 1 cut(s) 288
SfuI TTCGAA 1 cut(s) 398
SgrBI CCGCGG 1 cut(s) 288
SinI GGWCC 5 cut(s) 6, 249, 460, 1370, 1406
SmlI CTYRAG 2 cut(s) 1121, 1129
SmoI CTYRAG 2 cut(s) 1121, 1129
Sse9I AATT 5 cut(s) 444, 518, 1060, 1297, 1567
SstI GAGCTC 1 cut(s) 1184
StyD4I CCNGG 8 cut(s) 54, 222, 237, 611, 635, 1316, 1489, 1511
StyI CCWWGG 2 cut(s) 291, 1246
TaaI ACNGT 5 cut(s) 683, 1226, 1260, 1379, 1406
TaiI ACGT 3 cut(s) 653, 698, 1560
TaqI TCGA 9 cut(s) 162, 183, 216, 270, 398, 745, 1043, 1401, 1574
TaqII GACCGA 1 cut(s) 23
TasI AATT 5 cut(s) 444, 518, 1060, 1297, 1567
TauI GCSGC 7 cut(s) 260, 263, 287, 290, 635, 1245, 1545
TfiI GAWTC 7 cut(s) 122, 164, 185, 267, 503, 674, 1106
Tru1I TTAA 2 cut(s) 929, 1130
Tru9I TTAA 2 cut(s) 929, 1130
TscAI CASTG 1 cut(s) 1531
TseFI GTSAC 1 cut(s) 19
TseI GCWGC 6 cut(s) 704, 800, 1028, 1283, 1463, 1508
Tsp45I GTSAC 1 cut(s) 19
TspDTI ATGAA 2 cut(s) 88, 379
TspGWI ACGGA 2 cut(s) 41, 1026
TspRI CASTG 1 cut(s) 1531
Tth111I GACNNNGTC 1 cut(s) 32
Van91I CCANNNNNTGG 1 cut(s) 1424
Vha464I CTTAAG 1 cut(s) 1129
VpaK11BI GGWCC 5 cut(s) 6, 249, 460, 1370, 1406
XagI CCTNNNNNAGG 1 cut(s) 1315
XapI RAATTY 1 cut(s) 1060
XcmI CCANNNNNNNNNTGG 2 cut(s) 44, 619
Zsp2I ATGCAT 1 cut(s) 487
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.