Rh2AG055900

Belongs to the Frigida family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0013585
Physical Location & Seq
Forward (+)
4425775 .. 4428997
3223 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG055900.1

Sequence Viewer

Length: 1647 bp
ATGGGGACCGAACTGGTGGTCGCGACGGACCGAGTCCAGAAGTTCTTCGACGATCTAGAGGCCCAAAAGGCCATCCTCTCCACCTCCACCAAGCTCTACGCGACCCTCTCCGATCACTTCAACGCCCTCCACAAATCGCTCGCCGAGAAATCCCAATCCCTCGACGCCAAAATCGAATCCCTAGAATCGCGTTCCCGCCAAACTCTAGAGTCCCTCGACCTCCGGGAGATCTCGCTCCCGGAGCGCGAGGCCTCAGCCGCGGCCCGCGTTTCGGAGCAGAAAGGCGCCGCCTTGGCCGAGTTCGAGCGAAACGTTTCGGGGAGTTTGGACATCGCCGAAACGCTGAAGTCGTTGTGTAGAAAAATGGACTCGGAGTGGTTGCTGAAGTTCATAGTTTCGAAGCGGAAGGAGTCGGTGTCGCTGAGGGCGGAGATTGTTCAGGCCATGGCGGAGGCAGTGGACGCGCCGAGGCTGGTGTTGGATGCGTTGGAGGGGTTTCTGGAGACCAAGGCCAAGAAAGTTGGGGTCACTGATAAGCGGTGGGCCTGTGGGCTTTTGGTTCAGGCTTTGTTTCCGGATGTGAGGTCCAATTCGGGCCAGATAGGGCCGGCATTTGCCCGGAGTGTGGTGGAGAGAGCGGCGGGGGTTGCGGACACGTGGAAGGGGCAGATGGATGAGCTGAACAGGAGCGGTGGAGGGACGTTGGGGGCGGCGGAGGCGGTGATGTTTGTGCAGATGGTGATTGGGTTTCAGTTGAGAGAGAAGTACAATGAGGAGTTTTATAAGAAGTTGGTGATGGAACATGCTGCTAGGAGAGATATGGCAAGGCTTGCAGGGGCTTTACAATTCGGAGATATCGGAGATGTTATTGATGAGTTAGTGAAGAGTGGCAAGGAGATAGAGGCAATATATTTTGCTTTTGAGTCTGGTTTGACAGAGAGGTTTCCTCCGATTTCCCTTCTCAAGTCCTATTTGAAGAACTCCAAGAAGAATGCTTCAACCATAATGAAGAATGGAAACAATAGTGTGGCTGCATCTGAGGAGTCGAGCACTTTGGAGTTGAATTCCATCAAAGCAATGATCAAATGTGTAGAGGACCACAAGCTTGAATCAGAGTTTTCACTCGAATCCCTAAGGAAACGAGCCACTGCTCTAGAGAAAGCCAAAGCAGATAGAAAGAAGAATTCAGCAGCAGCTTCCGGTAAGTCTAATAACAAGCGTTCCTATGGTGGCGGCGGCGGCGGCGGCCGTGGAGGGGTTGGATCGTCTTCTTTCCGGCCAGCCAAAGCAGCCAAATATTCCAATGCATACCCGTCATCCTTCAACCGGAGGATCCCAAATCCTCCTCCACAGCACAGCCCTGTAACAAGATATCCTGGGCCGTACAATTACCCAAGCCCAACCCCAACCGTGTATGACGGTCCAACATCAGTCTCTTACGGAACCTCATATGGAGTAGCCCGTCCTCAAAGCCCTGTTGCTCTTCCACAACAACATATCTACTCCCTCTCTGGGGACAACAGCATGGCTGCTAGTTCTGTATTCCGAAGTGGTGGTTCATATGGTGGCCAGACCAGCTATGGAGGGCCATACGATTATGCAAATGGGACGCCGCCATCTTACCAACCGCTTCCTTATGCAAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Frigida

Protein Analysis

548

Amino Acids

59.41

Weight (kDa)

9.13

Isoelectric Point (pI)

49.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Frigida PF07899 111 - 396 9e-87 Frigida-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013585)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g05070 FvH4_1g05070 FvH4_1g05070
malus_domestica MD02G1048900.v1.1 MD15G1187200.v1.1
prunus_persica Prupe.7G229200_v2.0.a1
pyrus_communis pycom02g04100 pycom15g16770
rosa_chinensis RchiOBHm_Chr2g0090711
rosa_laevigata RLG00000016136
rosa_multiflora Rmu_ssc0000367.1_g000001
rosa_roxburghii Rroxscaffold_2G00150890
rosa_rugosa Rorug02G0009900
rosa_samantha Rh2AG055900 Rh2BG054300 Rh2CG056600 Rh2DG055400
rosa_wichuraiana Rw2G004670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 783
AccB1I GGYRCC 1 cut(s) 284
AccBSI CCGCTC 2 cut(s) 638, 690
AccII CGCG 7 cut(s) 23, 101, 190, 246, 260, 267, 464
AccIII TCCGGA 1 cut(s) 574
AclI AACGTT 1 cut(s) 312
AclWI GGATC 3 cut(s) 1270, 1327, 1340
AcoI YGGCCR 4 cut(s) 294, 1246, 1277, 1567
AcsI RAATTY 2 cut(s) 1063, 1183
AcuI CTGAAG 2 cut(s) 365, 404
AcvI CACGTG 1 cut(s) 657
AcyI GRCGYC 3 cut(s) 165, 285, 1610
AfaI GTAC 2 cut(s) 767, 1385
AfiI CCNNNNNNNGG 6 cut(s) 271, 625, 1255, 1326, 1512, 1513
AflIII ACRYGT 1 cut(s) 654
AgsI TTSAA 6 cut(s) 121, 976, 999, 1063, 1109, 1324
AjnI CCWGG 1 cut(s) 1375
AluBI AGCT 5 cut(s) 94, 679, 1105, 1196, 1578
AluI AGCT 5 cut(s) 94, 679, 1105, 1196, 1578
Alw21I GWGCWC 1 cut(s) 1052
Alw26I GTCTC 2 cut(s) 497, 1438
AlwI GGATC 3 cut(s) 1270, 1327, 1340
Aor13HI TCCGGA 1 cut(s) 574
ApeKI GCWGC 6 cut(s) 806, 1031, 1190, 1193, 1289, 1529
ApoI RAATTY 2 cut(s) 1063, 1183
ArsI GACNNNNNNTTYG 1 cut(s) 35
Asp700I GAANNNNTTC 2 cut(s) 44, 313
AspLEI GCGC 3 cut(s) 246, 287, 466
AsuC2I CCSGG 3 cut(s) 224, 239, 619
AsuHPI GGTGA 3 cut(s) 733, 751, 805
AsuII TTCGAA 1 cut(s) 398
AvaII GGWCC 5 cut(s) 6, 28, 585, 1096, 1421
AxyI CCTNAGG 1 cut(s) 1133
BalI TGGCCA 1 cut(s) 1569
BamHI GGATCC 1 cut(s) 1332
BanI GGYRCC 1 cut(s) 284
BbrPI CACGTG 1 cut(s) 657
BbsI GAAGAC 1 cut(s) 1260
Bbv12I GWGCWC 1 cut(s) 1052
BbvCI CCTCAGC 2 cut(s) 253, 422
BbvI GCAGC 6 cut(s) 793, 1018, 1202, 1205, 1301, 1516
BccI CCATC 6 cut(s) 80, 664, 730, 790, 1076, 1624
BceAI ACGGC 2 cut(s) 1233, 1366
BciT130I CCWGG 1 cut(s) 1377
BclI TGATCA 1 cut(s) 1080
BcnI CCSGG 3 cut(s) 224, 239, 619
BcoDI GTCTC 2 cut(s) 497, 1438
BfaI CTAG 6 cut(s) 56, 182, 206, 810, 1154, 1533
BfoI RGCGCY 1 cut(s) 288
BglI GCCNNNNNGGC 2 cut(s) 68, 293
BglII AGATCT 1 cut(s) 228
Bme1390I CCNGG 4 cut(s) 224, 239, 619, 1377
Bme18I GGWCC 5 cut(s) 6, 28, 585, 1096, 1421
BmiI GGNNCC 4 cut(s) 7, 286, 1334, 1444
BmrFI CCNGG 4 cut(s) 224, 239, 619, 1377
BmsI GCATC 2 cut(s) 472, 1043
BpiI GAAGAC 1 cut(s) 1260
BplI GAGNNNNNCTC 2 cut(s) 931, 963
BpmI CTGGAG 1 cut(s) 521
Bpu10I CCTNAGC 2 cut(s) 253, 422
Bpu14I TTCGAA 1 cut(s) 398
BpuEI CTTGAG 1 cut(s) 947
BpuMI CCSGG 3 cut(s) 224, 239, 619
BsaAI YACGTR 1 cut(s) 657
BsaHI GRCGYC 3 cut(s) 165, 285, 1610
BsaI GGTCTC 1 cut(s) 497
BsaJI CCNNGG 7 cut(s) 258, 291, 444, 467, 507, 1249, 1376
BsaWI WCCGGW 3 cut(s) 574, 1199, 1326
BsaXI ACNNNNNCTCC 2 cut(s) 401, 431
Bsc4I CCNNNNNNNGG 6 cut(s) 271, 625, 1255, 1326, 1512, 1513
Bse118I RCCGGY 1 cut(s) 607
Bse1I ACTGG 1 cut(s) 18
Bse21I CCTNAGG 1 cut(s) 1133
Bse3DI GCAATG 1 cut(s) 1083
BseAI TCCGGA 1 cut(s) 574
BseBI CCWGG 1 cut(s) 1377
BseDI CCNNGG 7 cut(s) 258, 291, 444, 467, 507, 1249, 1376
BseGI GGATG 5 cut(s) 72, 487, 583, 679, 1316
BseLI CCNNNNNNNGG 6 cut(s) 271, 625, 1255, 1326, 1512, 1513
BseMI GCAATG 1 cut(s) 1083
BseMII CTCAG 3 cut(s) 267, 413, 1029
BseNI ACTGG 1 cut(s) 18
BseRI GAGGAG 3 cut(s) 788, 1055, 1335
BseX3I CGGCCG 1 cut(s) 1246
BseXI GCAGC 6 cut(s) 793, 1018, 1202, 1205, 1301, 1516
BsgI GTGCAG 1 cut(s) 752
Bsh1236I CGCG 7 cut(s) 23, 101, 190, 246, 260, 267, 464
Bsh1285I CGRYCG 1 cut(s) 1249
BshNI GGYRCC 1 cut(s) 284
BsiEI CGRYCG 1 cut(s) 1249
BsiHKAI GWGCWC 1 cut(s) 1052
BsiSI CCGG 8 cut(s) 223, 239, 575, 608, 619, 1200, 1276, 1327
BslFI GGGAC 5 cut(s) 19, 196, 712, 1529, 1621
BslI CCNNNNNNNGG 6 cut(s) 271, 625, 1255, 1326, 1512, 1513
BsmAI GTCTC 2 cut(s) 497, 1438
BsmFI GGGAC 5 cut(s) 19, 196, 712, 1529, 1621
BsmI GAATGC 1 cut(s) 997
Bso31I GGTCTC 1 cut(s) 497
Bsp119I TTCGAA 1 cut(s) 398
Bsp1286I GDGCHC 1 cut(s) 1052
Bsp13I TCCGGA 1 cut(s) 574
Bsp143I GATC 6 cut(s) 52, 112, 228, 1080, 1262, 1332
Bsp19I CCATGG 1 cut(s) 444
Bsp68I TCGCGA 1 cut(s) 23
BspCNI CTCAG 3 cut(s) 266, 414, 1030
BspEI TCCGGA 1 cut(s) 574
BspFNI CGCG 7 cut(s) 23, 101, 190, 246, 260, 267, 464
BspLI GGNNCC 4 cut(s) 7, 286, 1334, 1444
BspPI GGATC 3 cut(s) 1270, 1327, 1340
BspQI GCTCTTC 1 cut(s) 1488
BspT104I TTCGAA 1 cut(s) 398
BspT107I GGYRCC 1 cut(s) 284
BspTNI GGTCTC 1 cut(s) 497
BsrBI CCGCTC 2 cut(s) 638, 690
BsrDI GCAATG 1 cut(s) 1083
BsrFI RCCGGY 1 cut(s) 607
BsrI ACTGG 1 cut(s) 18
BssAI RCCGGY 1 cut(s) 607
BssECI CCNNGG 7 cut(s) 258, 291, 444, 467, 507, 1249, 1376
BssMI GATC 6 cut(s) 52, 112, 228, 1080, 1262, 1332
BssNI GRCGYC 3 cut(s) 165, 285, 1610
BssT1I CCWWGG 3 cut(s) 291, 444, 507
Bst2UI CCWGG 1 cut(s) 1377
Bst4CI ACNGT 2 cut(s) 1411, 1421
Bst6I CTCTTC 2 cut(s) 878, 1488
BstACI GRCGYC 3 cut(s) 165, 285, 1610
BstAPI GCANNNNNTGC 1 cut(s) 830
BstBAI YACGTR 1 cut(s) 657
BstBI TTCGAA 1 cut(s) 398
BstC8I GCNNGC 5 cut(s) 141, 265, 609, 831, 1281
BstDEI CTNAG 4 cut(s) 253, 422, 1038, 1133
BstDSI CCRYGG 3 cut(s) 258, 444, 1249
BstF5I GGATG 5 cut(s) 72, 487, 583, 679, 1316
BstFNI CGCG 7 cut(s) 23, 101, 190, 246, 260, 267, 464
BstH2I RGCGCY 1 cut(s) 288
BstHHI GCGC 3 cut(s) 246, 287, 466
BstKTI GATC 6 cut(s) 55, 115, 231, 1083, 1265, 1335
BstMAI GTCTC 2 cut(s) 497, 1438
BstMBI GATC 6 cut(s) 52, 112, 228, 1080, 1262, 1332
BstMCI CGRYCG 1 cut(s) 1249
BstNI CCWGG 1 cut(s) 1377
BstNSI RCATGY 1 cut(s) 806
BstSCI CCNGG 4 cut(s) 222, 237, 617, 1375
BstUI CGCG 7 cut(s) 23, 101, 190, 246, 260, 267, 464
BstV1I GCAGC 6 cut(s) 793, 1018, 1202, 1205, 1301, 1516
BstV2I GAAGAC 1 cut(s) 1260
BstX2I RGATCY 2 cut(s) 228, 1332
BstYI RGATCY 2 cut(s) 228, 1332
BstZI CGGCCG 1 cut(s) 1246
Bsu36I CCTNAGG 1 cut(s) 1133
BtgI CCRYGG 3 cut(s) 258, 444, 1249
BtgZI GCGATG 1 cut(s) 316
BtsCI GGATG 5 cut(s) 72, 487, 583, 679, 1316
BtsI GCAGTG 2 cut(s) 462, 1146
BtsIMutI CAGTG 3 cut(s) 462, 528, 1146
BtuMI TCGCGA 1 cut(s) 23
Cac8I GCNNGC 5 cut(s) 141, 265, 609, 831, 1281
CfoI GCGC 3 cut(s) 246, 287, 466
Cfr10I RCCGGY 1 cut(s) 607
Cfr42I CCGCGG 1 cut(s) 261
CpoI CGGWCCG 1 cut(s) 28
CseI GACGC 3 cut(s) 173, 470, 1618
Csp6I GTAC 2 cut(s) 766, 1384
CspI CGGWCCG 1 cut(s) 28
CviAII CATG 3 cut(s) 445, 803, 1525
CviQI GTAC 2 cut(s) 766, 1384
DdeI CTNAG 4 cut(s) 253, 422, 1038, 1133
DinI GGCGCC 1 cut(s) 286
DpnI GATC 6 cut(s) 54, 114, 230, 1082, 1264, 1334
DpnII GATC 6 cut(s) 52, 112, 228, 1080, 1262, 1332
EaeI YGGCCR 4 cut(s) 294, 1246, 1277, 1567
EagI CGGCCG 1 cut(s) 1246
Eam1104I CTCTTC 2 cut(s) 878, 1488
EarI CTCTTC 2 cut(s) 878, 1488
EciI GGCGGA 3 cut(s) 443, 464, 728
EclXI CGGCCG 1 cut(s) 1246
Eco130I CCWWGG 3 cut(s) 291, 444, 507
Eco147I AGGCCT 1 cut(s) 251
Eco31I GGTCTC 1 cut(s) 497
Eco32I GATATC 2 cut(s) 856, 1373
Eco47I GGWCC 5 cut(s) 6, 28, 585, 1096, 1421
Eco52I CGGCCG 1 cut(s) 1246
Eco57I CTGAAG 2 cut(s) 365, 404
Eco72I CACGTG 1 cut(s) 657
Eco81I CCTNAGG 1 cut(s) 1133
EcoRI GAATTC 2 cut(s) 1063, 1183
EcoRII CCWGG 1 cut(s) 1375
EcoRV GATATC 2 cut(s) 856, 1373
EcoT14I CCWWGG 3 cut(s) 291, 444, 507
EcoT22I ATGCAT 1 cut(s) 1309
EgeI GGCGCC 1 cut(s) 286
EheI GGCGCC 1 cut(s) 286
ErhI CCWWGG 3 cut(s) 291, 444, 507
FaeI CATG 3 cut(s) 448, 806, 1528
FaqI GGGAC 5 cut(s) 19, 196, 712, 1529, 1621
FatI CATG 3 cut(s) 444, 802, 1524
FauI CCCGC 3 cut(s) 203, 272, 634
FauNDI CATATG 2 cut(s) 1450, 1561
FbaI TGATCA 1 cut(s) 1080
FokI GGATG 5 cut(s) 59, 494, 590, 686, 1303
FspBI CTAG 6 cut(s) 56, 182, 206, 810, 1154, 1533
GlaI GCGC 3 cut(s) 245, 286, 465
GsuI CTGGAG 1 cut(s) 521
HaeII RGCGCY 1 cut(s) 288
HapII CCGG 8 cut(s) 223, 239, 575, 608, 619, 1200, 1276, 1327
HgaI GACGC 3 cut(s) 173, 470, 1618
HhaI GCGC 3 cut(s) 246, 287, 466
Hin1I GRCGYC 3 cut(s) 165, 285, 1610
Hin1II CATG 3 cut(s) 448, 806, 1528
Hin6I GCGC 3 cut(s) 244, 285, 464
HinP1I GCGC 3 cut(s) 244, 285, 464
HindIII AAGCTT 1 cut(s) 1103
HpaII CCGG 8 cut(s) 223, 239, 575, 608, 619, 1200, 1276, 1327
HphI GGTGA 3 cut(s) 733, 751, 805
Hpy166II GTNNAC 1 cut(s) 460
Hpy188I TCNGA 9 cut(s) 112, 274, 373, 851, 860, 951, 1039, 1114, 1547
Hpy188III TCNNGA 7 cut(s) 22, 37, 56, 206, 500, 575, 1154
Hpy8I GTNNAC 1 cut(s) 460
Hpy99I CGWCG 3 cut(s) 28, 53, 167
HpyAV CCTTC 4 cut(s) 400, 655, 968, 1330
HpyCH4III ACNGT 2 cut(s) 1411, 1421
HpyCH4IV ACGT 3 cut(s) 312, 656, 701
HpyCH4V TGCA 6 cut(s) 733, 833, 1034, 1307, 1601, 1640
HpyF3I CTNAG 4 cut(s) 253, 422, 1038, 1133
HpySE526I ACGT 3 cut(s) 312, 656, 701
Hsp92I GRCGYC 3 cut(s) 165, 285, 1610
Hsp92II CATG 3 cut(s) 448, 806, 1528
HspAI GCGC 3 cut(s) 244, 285, 464
KasI GGCGCC 1 cut(s) 284
Kpn2I TCCGGA 1 cut(s) 574
KroI GCCGGC 1 cut(s) 607
KroNI GCCGGC 1 cut(s) 609
Ksp22I TGATCA 1 cut(s) 1080
KspI CCGCGG 1 cut(s) 261
Kzo9I GATC 6 cut(s) 52, 112, 228, 1080, 1262, 1332
LguI GCTCTTC 1 cut(s) 1488
LmnI GCTCC 4 cut(s) 240, 241, 274, 687
Lsp1109I GCAGC 6 cut(s) 793, 1018, 1202, 1205, 1301, 1516
LweI GCATC 2 cut(s) 472, 1043
MaeI CTAG 6 cut(s) 56, 182, 206, 810, 1154, 1533
MaeII ACGT 3 cut(s) 312, 656, 701
MaeIII GTNAC 2 cut(s) 526, 1363
MalI GATC 6 cut(s) 54, 114, 230, 1082, 1264, 1334
MbiI CCGCTC 2 cut(s) 638, 690
MboI GATC 6 cut(s) 52, 112, 228, 1080, 1262, 1332
MboII GAAGA 8 cut(s) 37, 895, 988, 1000, 1021, 1192, 1260, 1475
MflI RGATCY 2 cut(s) 228, 1332
MhlI GDGCHC 1 cut(s) 1052
MlsI TGGCCA 1 cut(s) 1569
MluCI AATT 5 cut(s) 589, 845, 1063, 1183, 1387
MluNI TGGCCA 1 cut(s) 1569
Mly113I GGCGCC 1 cut(s) 285
MlyI GAGTC 6 cut(s) 42, 218, 362, 419, 932, 1052
MmeI TCCRAC 4 cut(s) 459, 468, 1240, 1448
Mox20I TGGCCA 1 cut(s) 1569
Mph1103I ATGCAT 1 cut(s) 1309
MroI TCCGGA 1 cut(s) 574
MroNI GCCGGC 1 cut(s) 607
MroXI GAANNNNTTC 2 cut(s) 44, 313
MscI TGGCCA 1 cut(s) 1569
Msp20I TGGCCA 1 cut(s) 1569
MspA1I CMGCKG 1 cut(s) 260
MspI CCGG 8 cut(s) 223, 239, 575, 608, 619, 1200, 1276, 1327
MspR9I CCNGG 4 cut(s) 224, 239, 619, 1377
Mva1269I GAATGC 1 cut(s) 997
MvaI CCWGG 1 cut(s) 1377
MvnI CGCG 7 cut(s) 23, 101, 190, 246, 260, 267, 464
NaeI GCCGGC 1 cut(s) 609
NarI GGCGCC 1 cut(s) 285
NciI CCSGG 3 cut(s) 224, 239, 619
NcoI CCATGG 1 cut(s) 444
NdeI CATATG 2 cut(s) 1450, 1561
NdeII GATC 6 cut(s) 52, 112, 228, 1080, 1262, 1332
NgoMIV GCCGGC 1 cut(s) 607
NlaIII CATG 3 cut(s) 448, 806, 1528
NlaIV GGNNCC 4 cut(s) 7, 286, 1334, 1444
NmeAIII GCCGAG 3 cut(s) 169, 322, 492
NmuCI GTSAC 1 cut(s) 526
NruI TCGCGA 1 cut(s) 23
NsiI ATGCAT 1 cut(s) 1309
NspI RCATGY 1 cut(s) 806
NspV TTCGAA 1 cut(s) 398
PceI AGGCCT 1 cut(s) 251
PciSI GCTCTTC 1 cut(s) 1488
PcsI WCGNNNNNNNCGW 3 cut(s) 171, 309, 347
PctI GAATGC 1 cut(s) 997
PdiI GCCGGC 1 cut(s) 609
PdmI GAANNNNTTC 2 cut(s) 44, 313
PfeI GAWTC 4 cut(s) 176, 185, 1109, 1127
PflFI GACNNNGTC 1 cut(s) 32
PfoI TCCNGGA 2 cut(s) 222, 237
PleI GAGTC 6 cut(s) 41, 217, 362, 418, 931, 1051
PluTI GGCGCC 1 cut(s) 288
PmaCI CACGTG 1 cut(s) 657
PmlI CACGTG 1 cut(s) 657
PpsI GAGTC 6 cut(s) 41, 217, 362, 418, 931, 1051
Ppu21I YACGTR 1 cut(s) 657
PsiI TTATAA 1 cut(s) 783
Psp1406I AACGTT 1 cut(s) 312
Psp6I CCWGG 1 cut(s) 1375
PspCI CACGTG 1 cut(s) 657
PspGI CCWGG 1 cut(s) 1375
PspN4I GGNNCC 4 cut(s) 7, 286, 1334, 1444
PsuI RGATCY 2 cut(s) 228, 1332
PsyI GACNNNGTC 1 cut(s) 32
RruI TCGCGA 1 cut(s) 23
RsaI GTAC 2 cut(s) 767, 1385
RsaNI GTAC 2 cut(s) 766, 1384
Rsr2I CGGWCCG 1 cut(s) 28
RsrII CGGWCCG 1 cut(s) 28
SacII CCGCGG 1 cut(s) 261
SapI GCTCTTC 1 cut(s) 1488
Sau3AI GATC 6 cut(s) 52, 112, 228, 1080, 1262, 1332
SchI GAGTC 6 cut(s) 42, 218, 362, 419, 932, 1052
ScrFI CCNGG 4 cut(s) 224, 239, 619, 1377
SduI GDGCHC 1 cut(s) 1052
SfaNI GCATC 2 cut(s) 472, 1043
SfiI GGCCNNNNNGGCC 1 cut(s) 68
SfoI GGCGCC 1 cut(s) 286
Sfr303I CCGCGG 1 cut(s) 261
SfuI TTCGAA 1 cut(s) 398
SgrBI CCGCGG 1 cut(s) 261
SinI GGWCC 5 cut(s) 6, 28, 585, 1096, 1421
SmlI CTYRAG 1 cut(s) 962
SmoI CTYRAG 1 cut(s) 962
Sse9I AATT 5 cut(s) 589, 845, 1063, 1183, 1387
SseBI AGGCCT 1 cut(s) 251
SspDI GGCGCC 1 cut(s) 284
SspI AATATT 1 cut(s) 1298
SspMI CTAG 6 cut(s) 56, 182, 206, 810, 1154, 1533
StuI AGGCCT 1 cut(s) 251
StyD4I CCNGG 4 cut(s) 222, 237, 617, 1375
StyI CCWWGG 3 cut(s) 291, 444, 507
TaaI ACNGT 2 cut(s) 1411, 1421
TaiI ACGT 3 cut(s) 315, 659, 704
TaqI TCGA 8 cut(s) 48, 162, 174, 216, 303, 398, 1046, 1125
TaqII GACCGA 2 cut(s) 23, 45
TasI AATT 5 cut(s) 589, 845, 1063, 1183, 1387
TatI WGTACW 1 cut(s) 765
TfiI GAWTC 4 cut(s) 176, 185, 1109, 1127
TscAI CASTG 3 cut(s) 462, 535, 1153
TseFI GTSAC 1 cut(s) 526
TseI GCWGC 6 cut(s) 806, 1031, 1190, 1193, 1289, 1529
Tsp45I GTSAC 1 cut(s) 526
TspDTI ATGAA 3 cut(s) 379, 1022, 1548
TspGWI ACGGA 2 cut(s) 41, 1455
TspRI CASTG 3 cut(s) 462, 535, 1153
Tth111I GACNNNGTC 1 cut(s) 32
VpaK11BI GGWCC 5 cut(s) 6, 28, 585, 1096, 1421
XapI RAATTY 2 cut(s) 1063, 1183
XbaI TCTAGA 3 cut(s) 55, 205, 1153
XceI RCATGY 1 cut(s) 806
XcmI CCANNNNNNNNNTGG 1 cut(s) 1577
XmnI GAANNNNTTC 2 cut(s) 44, 313
XspI CTAG 6 cut(s) 56, 182, 206, 810, 1154, 1533
Zsp2I ATGCAT 1 cut(s) 1309
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.