RLG00000016136

Belongs to the Frigida family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0013585
Physical Location & Seq
Forward (+)
4126669 .. 4129600
2932 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000016136

Sequence Viewer

Length: 1653 bp
ATGGGGACTGAACTGGTGGTCGCGACGGACCGAGTCCAGAAGTTCTTCGACGACCTAGAGGCCCAAAAGGCCATCCTCTCCACCTCCACCAAGCTCTACGCGACCCTCTCCGATCACTTCAACGCCCTCCACAAATCGCTCGCCGAGAAATCCCAATCCCTCGACGCCAAAATCGAATCCCTAGAATCGCGTTCCCGCGAAACCCTAGAGTCCCTCGACCTCCGGGAGATCTCGCTCCCGGAGCGCGAGGCCTCCGCCACGGCCCGCGTTTCGGAGCAGAAAGGCGCCGCCTTGGCCGAGTTTGAGCGAACCGTTTCGGGGAGCTTGGACATCGCCGAAACGCTGAAGTCGTTGTGTAGAAAAATGGACTCGGAGGGGTTGCTGAAGTTCATAGTTTCGAAGCGGAAGGAGTCGGTGTCGCTGAGGGCGGAGATTGTTCAGGCCATGGCGGAGGCGGTGGACGCGCCGAGGCTGGTGTTGGATGCGTTGGAGGGGTTTCTGGAGACCAAGGCCAAGAAAGTTGGGGTCACTGATAAGCGGTGGGCCTGTGGGCTGTTGGTTCAGGCTTTGTTTCCTGATGTGAGGTCGAATTCGGGCCCGAAAGGGCCGGCATTTGCCCGGAGTGTGGTGGAGAGAGCGGCGGGGGTTGCGGACACGTGGAAGGGGCAGATGGATGAGCTGAACAGGAGCGGTGGAGGGACGTTGGGGGCGGCGGAGGCGGTGATGTTTGTGCAGATGGTGATTGGGTTTCAGTTGAGAGAGAAGTACAATGAGGAGTTTTATAAGAAGTTGGTGATGGAACATGCTGCTAGGAGAGATATGGCAAGGCTTGCAGGGGCTTTGCGATTTGGAGATATTGGAGATGTTATTGATGAGTTAGTGAAGAATGGCAAGGAGATAGAGGCAATATATTTTGCTTTTGAGTCTGGTTTGACAGAGAGGTTTCCTCCGATTTCCCTTCTCAAGTCCTATTTGAAGAACTCCAAGAAGAATGCTTCAACCATAATGAAGAATGGAAACAATAGTGTGGCTGCATCTGAGGAATCGAGCACTTTGGAGTTGAATTCCATCAAAGCAATGATCAAATGTGTAGAGGACCACAAGCTTGAATCAGAGTTTTCACTTGAACCCCTAAGGAAGCGAGCCACTGCTCTAGAGAAAGCCAAAGCAGATAGAAAGAAGAATTCAGCAGCAGCTTCCGGTAAGTCTAATAACAAGCGTTCCTATGGTGGTGGCGGCGGCAGCGGTGGCGGCCGTGGAGGGGTTGGATCGTCTTCTTTCCGGCCAGCCAAAGCAGCCAAATATTCCAATGCATACCCATCATCCTTTACCCGGAGGATCCCAAATCCTCCTCCACAGCACAGCCCCGTAACAAGATATCCTGGGCCGTACAATTACCCAAGCCCAACCCCAACCGTGTATGATGGCCCAACATCAGTCTCTTACGGAACCTCATATGGAGTAGCCCGTGCTCAAAGCCCTGTTGCTCTTCCACAACAACATATCTATTCCCTCTCTGGGGACAACAGCATGGCTGCTAGTTCTGTATTCCGAAGTGGTGGTTCATATGGTGGCCAGACCAGCTATGGAGGGCCATACGATTATGCAAATGCGACGCCGCCATCTTACCAACCGCTTCCTTATCCAAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Frigida

Protein Analysis

551

Amino Acids

59.49

Weight (kDa)

9.18

Isoelectric Point (pI)

48.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Frigida PF07899 111 - 396 6.7e-89 Frigida-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013585)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g05070 FvH4_1g05070 FvH4_1g05070
malus_domestica MD02G1048900.v1.1 MD15G1187200.v1.1
prunus_persica Prupe.7G229200_v2.0.a1
pyrus_communis pycom02g04100 pycom15g16770
rosa_chinensis RchiOBHm_Chr2g0090711
rosa_laevigata RLG00000016136
rosa_multiflora Rmu_ssc0000367.1_g000001
rosa_roxburghii Rroxscaffold_2G00150890
rosa_rugosa Rorug02G0009900
rosa_samantha Rh2AG055900 Rh2BG054300 Rh2CG056600 Rh2DG055400
rosa_wichuraiana Rw2G004670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 783
AccB1I GGYRCC 1 cut(s) 284
AccBSI CCGCTC 2 cut(s) 638, 690
AccII CGCG 7 cut(s) 23, 101, 190, 198, 246, 267, 464
AclWI GGATC 3 cut(s) 1276, 1333, 1346
AcoI YGGCCR 4 cut(s) 294, 1252, 1283, 1573
AcsI RAATTY 3 cut(s) 589, 1063, 1183
AcuI CTGAAG 2 cut(s) 365, 404
AcvI CACGTG 1 cut(s) 657
AcyI GRCGYC 3 cut(s) 165, 285, 1616
AfaI GTAC 2 cut(s) 767, 1391
AfiI CCNNNNNNNGG 7 cut(s) 271, 318, 625, 1261, 1332, 1518, 1519
AflIII ACRYGT 1 cut(s) 654
AgsI TTSAA 6 cut(s) 121, 976, 999, 1063, 1109, 1127
AjnI CCWGG 1 cut(s) 1381
AluBI AGCT 6 cut(s) 94, 324, 679, 1105, 1196, 1584
AluI AGCT 6 cut(s) 94, 324, 679, 1105, 1196, 1584
Alw21I GWGCWC 2 cut(s) 1052, 1474
Alw26I GTCTC 2 cut(s) 497, 1444
AlwI GGATC 3 cut(s) 1276, 1333, 1346
ApaI GGGCCC 1 cut(s) 599
ApeKI GCWGC 7 cut(s) 806, 1031, 1190, 1193, 1242, 1295, 1535
ApoI RAATTY 3 cut(s) 589, 1063, 1183
Asp700I GAANNNNTTC 2 cut(s) 44, 313
AspLEI GCGC 3 cut(s) 246, 287, 466
AsuC2I CCSGG 4 cut(s) 224, 239, 619, 1333
AsuHPI GGTGA 3 cut(s) 733, 751, 805
AsuII TTCGAA 1 cut(s) 398
AvaII GGWCC 2 cut(s) 28, 1096
AxyI CCTNAGG 1 cut(s) 1133
BaeGI GKGCMC 1 cut(s) 599
BalI TGGCCA 1 cut(s) 1575
BamHI GGATCC 1 cut(s) 1338
BanI GGYRCC 1 cut(s) 284
BanII GRGCYC 1 cut(s) 599
BbrPI CACGTG 1 cut(s) 657
BbsI GAAGAC 1 cut(s) 1266
Bbv12I GWGCWC 2 cut(s) 1052, 1474
BbvCI CCTCAGC 1 cut(s) 422
BbvI GCAGC 7 cut(s) 793, 1018, 1202, 1205, 1254, 1307, 1522
BccI CCATC 8 cut(s) 80, 664, 730, 790, 1076, 1327, 1418, 1630
BceAI ACGGC 3 cut(s) 276, 1239, 1372
BciT130I CCWGG 1 cut(s) 1383
BclI TGATCA 1 cut(s) 1080
BcnI CCSGG 4 cut(s) 224, 239, 619, 1333
BcoDI GTCTC 2 cut(s) 497, 1444
BfaI CTAG 6 cut(s) 56, 182, 206, 810, 1154, 1539
BfoI RGCGCY 1 cut(s) 288
BglI GCCNNNNNGGC 2 cut(s) 68, 293
BglII AGATCT 1 cut(s) 228
Bme1390I CCNGG 5 cut(s) 224, 239, 619, 1333, 1383
Bme18I GGWCC 2 cut(s) 28, 1096
BmiI GGNNCC 4 cut(s) 286, 597, 1340, 1450
BmrFI CCNGG 5 cut(s) 224, 239, 619, 1333, 1383
BmsI GCATC 2 cut(s) 472, 1043
BpiI GAAGAC 1 cut(s) 1266
BplI GAGNNNNNCTC 2 cut(s) 931, 963
BpmI CTGGAG 1 cut(s) 521
Bpu10I CCTNAGC 1 cut(s) 422
Bpu14I TTCGAA 1 cut(s) 398
BpuEI CTTGAG 1 cut(s) 947
BpuMI CCSGG 4 cut(s) 224, 239, 619, 1333
BsaAI YACGTR 1 cut(s) 657
BsaHI GRCGYC 3 cut(s) 165, 285, 1616
BsaI GGTCTC 1 cut(s) 497
BsaJI CCNNGG 7 cut(s) 258, 291, 444, 467, 507, 1255, 1382
BsaWI WCCGGW 1 cut(s) 1199
BsaXI ACNNNNNCTCC 2 cut(s) 401, 431
Bsc4I CCNNNNNNNGG 7 cut(s) 271, 318, 625, 1261, 1332, 1518, 1519
Bse118I RCCGGY 1 cut(s) 607
Bse1I ACTGG 1 cut(s) 18
Bse21I CCTNAGG 1 cut(s) 1133
Bse3DI GCAATG 1 cut(s) 1083
BseBI CCWGG 1 cut(s) 1383
BseDI CCNNGG 7 cut(s) 258, 291, 444, 467, 507, 1255, 1382
BseGI GGATG 4 cut(s) 72, 487, 679, 1322
BseLI CCNNNNNNNGG 7 cut(s) 271, 318, 625, 1261, 1332, 1518, 1519
BseMI GCAATG 1 cut(s) 1083
BseMII CTCAG 2 cut(s) 413, 1029
BseNI ACTGG 1 cut(s) 18
BseRI GAGGAG 2 cut(s) 788, 1341
BseSI GKGCMC 1 cut(s) 599
BseX3I CGGCCG 1 cut(s) 1252
BseXI GCAGC 7 cut(s) 793, 1018, 1202, 1205, 1254, 1307, 1522
BsgI GTGCAG 1 cut(s) 752
Bsh1236I CGCG 7 cut(s) 23, 101, 190, 198, 246, 267, 464
Bsh1285I CGRYCG 1 cut(s) 1255
BshNI GGYRCC 1 cut(s) 284
BsiEI CGRYCG 1 cut(s) 1255
BsiHKAI GWGCWC 2 cut(s) 1052, 1474
BsiSI CCGG 7 cut(s) 223, 239, 608, 619, 1200, 1282, 1333
BslFI GGGAC 4 cut(s) 19, 196, 712, 1535
BslI CCNNNNNNNGG 7 cut(s) 271, 318, 625, 1261, 1332, 1518, 1519
BsmAI GTCTC 2 cut(s) 497, 1444
BsmFI GGGAC 4 cut(s) 19, 196, 712, 1535
BsmI GAATGC 1 cut(s) 997
Bso31I GGTCTC 1 cut(s) 497
Bsp119I TTCGAA 1 cut(s) 398
Bsp120I GGGCCC 1 cut(s) 595
Bsp1286I GDGCHC 3 cut(s) 599, 1052, 1474
Bsp143I GATC 5 cut(s) 112, 228, 1080, 1268, 1338
Bsp19I CCATGG 1 cut(s) 444
Bsp68I TCGCGA 1 cut(s) 23
BspCNI CTCAG 2 cut(s) 414, 1030
BspFNI CGCG 7 cut(s) 23, 101, 190, 198, 246, 267, 464
BspLI GGNNCC 4 cut(s) 286, 597, 1340, 1450
BspPI GGATC 3 cut(s) 1276, 1333, 1346
BspQI GCTCTTC 1 cut(s) 1494
BspT104I TTCGAA 1 cut(s) 398
BspT107I GGYRCC 1 cut(s) 284
BspTNI GGTCTC 1 cut(s) 497
BsrBI CCGCTC 2 cut(s) 638, 690
BsrDI GCAATG 1 cut(s) 1083
BsrFI RCCGGY 1 cut(s) 607
BsrI ACTGG 1 cut(s) 18
BssAI RCCGGY 1 cut(s) 607
BssECI CCNNGG 7 cut(s) 258, 291, 444, 467, 507, 1255, 1382
BssMI GATC 5 cut(s) 112, 228, 1080, 1268, 1338
BssNI GRCGYC 3 cut(s) 165, 285, 1616
BssT1I CCWWGG 3 cut(s) 291, 444, 507
Bst2UI CCWGG 1 cut(s) 1383
Bst4CI ACNGT 2 cut(s) 313, 1417
Bst6I CTCTTC 1 cut(s) 1494
BstACI GRCGYC 3 cut(s) 165, 285, 1616
BstAPI GCANNNNNTGC 1 cut(s) 830
BstBAI YACGTR 1 cut(s) 657
BstBI TTCGAA 1 cut(s) 398
BstC8I GCNNGC 6 cut(s) 141, 265, 609, 831, 1143, 1287
BstDEI CTNAG 3 cut(s) 422, 1038, 1133
BstDSI CCRYGG 3 cut(s) 258, 444, 1255
BstF5I GGATG 4 cut(s) 72, 487, 679, 1322
BstFNI CGCG 7 cut(s) 23, 101, 190, 198, 246, 267, 464
BstH2I RGCGCY 1 cut(s) 288
BstHHI GCGC 3 cut(s) 246, 287, 466
BstKTI GATC 5 cut(s) 115, 231, 1083, 1271, 1341
BstMAI GTCTC 2 cut(s) 497, 1444
BstMBI GATC 5 cut(s) 112, 228, 1080, 1268, 1338
BstMCI CGRYCG 1 cut(s) 1255
BstNI CCWGG 1 cut(s) 1383
BstNSI RCATGY 1 cut(s) 806
BstSCI CCNGG 5 cut(s) 222, 237, 617, 1331, 1381
BstSLI GKGCMC 1 cut(s) 599
BstUI CGCG 7 cut(s) 23, 101, 190, 198, 246, 267, 464
BstV1I GCAGC 7 cut(s) 793, 1018, 1202, 1205, 1254, 1307, 1522
BstV2I GAAGAC 1 cut(s) 1266
BstX2I RGATCY 2 cut(s) 228, 1338
BstYI RGATCY 2 cut(s) 228, 1338
BstZI CGGCCG 1 cut(s) 1252
Bsu36I CCTNAGG 1 cut(s) 1133
BtgI CCRYGG 3 cut(s) 258, 444, 1255
BtgZI GCGATG 1 cut(s) 316
BtsCI GGATG 4 cut(s) 72, 487, 679, 1322
BtsI GCAGTG 1 cut(s) 1146
BtsIMutI CAGTG 2 cut(s) 528, 1146
BtuMI TCGCGA 1 cut(s) 23
Cac8I GCNNGC 6 cut(s) 141, 265, 609, 831, 1143, 1287
CfoI GCGC 3 cut(s) 246, 287, 466
Cfr10I RCCGGY 1 cut(s) 607
CpoI CGGWCCG 1 cut(s) 28
CseI GACGC 3 cut(s) 173, 470, 1624
Csp6I GTAC 2 cut(s) 766, 1390
CspI CGGWCCG 1 cut(s) 28
CviAII CATG 3 cut(s) 445, 803, 1531
CviQI GTAC 2 cut(s) 766, 1390
DdeI CTNAG 3 cut(s) 422, 1038, 1133
DinI GGCGCC 1 cut(s) 286
DpnI GATC 5 cut(s) 114, 230, 1082, 1270, 1340
DpnII GATC 5 cut(s) 112, 228, 1080, 1268, 1338
EaeI YGGCCR 4 cut(s) 294, 1252, 1283, 1573
EagI CGGCCG 1 cut(s) 1252
Eam1104I CTCTTC 1 cut(s) 1494
EarI CTCTTC 1 cut(s) 1494
EciI GGCGGA 4 cut(s) 244, 443, 464, 728
EclXI CGGCCG 1 cut(s) 1252
Eco130I CCWWGG 3 cut(s) 291, 444, 507
Eco147I AGGCCT 1 cut(s) 251
Eco24I GRGCYC 1 cut(s) 599
Eco31I GGTCTC 1 cut(s) 497
Eco32I GATATC 1 cut(s) 1379
Eco47I GGWCC 2 cut(s) 28, 1096
Eco52I CGGCCG 1 cut(s) 1252
Eco57I CTGAAG 2 cut(s) 365, 404
Eco72I CACGTG 1 cut(s) 657
Eco81I CCTNAGG 1 cut(s) 1133
EcoRI GAATTC 3 cut(s) 589, 1063, 1183
EcoRII CCWGG 1 cut(s) 1381
EcoRV GATATC 1 cut(s) 1379
EcoT14I CCWWGG 3 cut(s) 291, 444, 507
EcoT22I ATGCAT 1 cut(s) 1315
EcoT38I GRGCYC 1 cut(s) 599
EgeI GGCGCC 1 cut(s) 286
EheI GGCGCC 1 cut(s) 286
ErhI CCWWGG 3 cut(s) 291, 444, 507
FaeI CATG 3 cut(s) 448, 806, 1534
FaqI GGGAC 4 cut(s) 19, 196, 712, 1535
FatI CATG 3 cut(s) 444, 802, 1530
FauI CCCGC 3 cut(s) 203, 272, 634
FauNDI CATATG 2 cut(s) 1456, 1567
FbaI TGATCA 1 cut(s) 1080
FokI GGATG 4 cut(s) 59, 494, 686, 1309
FriOI GRGCYC 1 cut(s) 599
FspBI CTAG 6 cut(s) 56, 182, 206, 810, 1154, 1539
GlaI GCGC 3 cut(s) 245, 286, 465
GsuI CTGGAG 1 cut(s) 521
HaeII RGCGCY 1 cut(s) 288
HapII CCGG 7 cut(s) 223, 239, 608, 619, 1200, 1282, 1333
HgaI GACGC 3 cut(s) 173, 470, 1624
HhaI GCGC 3 cut(s) 246, 287, 466
Hin1I GRCGYC 3 cut(s) 165, 285, 1616
Hin1II CATG 3 cut(s) 448, 806, 1534
Hin6I GCGC 3 cut(s) 244, 285, 464
HinP1I GCGC 3 cut(s) 244, 285, 464
HindIII AAGCTT 1 cut(s) 1103
HinfI GANTC 9 cut(s) 33, 176, 185, 209, 368, 410, 923, 1043, 1109
HpaII CCGG 7 cut(s) 223, 239, 608, 619, 1200, 1282, 1333
HphI GGTGA 3 cut(s) 733, 751, 805
Hpy166II GTNNAC 1 cut(s) 460
Hpy188I TCNGA 7 cut(s) 112, 274, 373, 951, 1039, 1114, 1553
Hpy188III TCNNGA 5 cut(s) 22, 37, 500, 575, 1154
Hpy8I GTNNAC 1 cut(s) 460
Hpy99I CGWCG 4 cut(s) 28, 53, 167, 1618
HpyAV CCTTC 3 cut(s) 400, 655, 968
HpyCH4III ACNGT 2 cut(s) 313, 1417
HpyCH4IV ACGT 2 cut(s) 656, 701
HpyCH4V TGCA 5 cut(s) 733, 833, 1034, 1313, 1607
HpyF3I CTNAG 3 cut(s) 422, 1038, 1133
HpySE526I ACGT 2 cut(s) 656, 701
Hsp92I GRCGYC 3 cut(s) 165, 285, 1616
Hsp92II CATG 3 cut(s) 448, 806, 1534
HspAI GCGC 3 cut(s) 244, 285, 464
KasI GGCGCC 1 cut(s) 284
KroI GCCGGC 1 cut(s) 607
KroNI GCCGGC 1 cut(s) 609
Ksp22I TGATCA 1 cut(s) 1080
Kzo9I GATC 5 cut(s) 112, 228, 1080, 1268, 1338
LguI GCTCTTC 1 cut(s) 1494
LmnI GCTCC 5 cut(s) 240, 241, 274, 321, 687
Lsp1109I GCAGC 7 cut(s) 793, 1018, 1202, 1205, 1254, 1307, 1522
LweI GCATC 2 cut(s) 472, 1043
MaeI CTAG 6 cut(s) 56, 182, 206, 810, 1154, 1539
MaeII ACGT 2 cut(s) 656, 701
MaeIII GTNAC 2 cut(s) 526, 1369
MalI GATC 5 cut(s) 114, 230, 1082, 1270, 1340
MbiI CCGCTC 2 cut(s) 638, 690
MboI GATC 5 cut(s) 112, 228, 1080, 1268, 1338
MboII GAAGA 8 cut(s) 37, 895, 988, 1000, 1021, 1192, 1266, 1481
MflI RGATCY 2 cut(s) 228, 1338
MhlI GDGCHC 3 cut(s) 599, 1052, 1474
MlsI TGGCCA 1 cut(s) 1575
MluCI AATT 4 cut(s) 589, 1063, 1183, 1393
MluNI TGGCCA 1 cut(s) 1575
Mly113I GGCGCC 1 cut(s) 285
MlyI GAGTC 5 cut(s) 42, 218, 362, 419, 932
MmeI TCCRAC 3 cut(s) 459, 468, 1246
Mox20I TGGCCA 1 cut(s) 1575
Mph1103I ATGCAT 1 cut(s) 1315
MroNI GCCGGC 1 cut(s) 607
MroXI GAANNNNTTC 2 cut(s) 44, 313
MscI TGGCCA 1 cut(s) 1575
Msp20I TGGCCA 1 cut(s) 1575
MspA1I CMGCKG 1 cut(s) 1245
MspI CCGG 7 cut(s) 223, 239, 608, 619, 1200, 1282, 1333
MspR9I CCNGG 5 cut(s) 224, 239, 619, 1333, 1383
Mva1269I GAATGC 1 cut(s) 997
MvaI CCWGG 1 cut(s) 1383
MvnI CGCG 7 cut(s) 23, 101, 190, 198, 246, 267, 464
NaeI GCCGGC 1 cut(s) 609
NarI GGCGCC 1 cut(s) 285
NciI CCSGG 4 cut(s) 224, 239, 619, 1333
NcoI CCATGG 1 cut(s) 444
NdeI CATATG 2 cut(s) 1456, 1567
NdeII GATC 5 cut(s) 112, 228, 1080, 1268, 1338
NgoMIV GCCGGC 1 cut(s) 607
NlaIII CATG 3 cut(s) 448, 806, 1534
NlaIV GGNNCC 4 cut(s) 286, 597, 1340, 1450
NmeAIII GCCGAG 3 cut(s) 169, 322, 492
NmuCI GTSAC 1 cut(s) 526
NruI TCGCGA 1 cut(s) 23
NsiI ATGCAT 1 cut(s) 1315
NspI RCATGY 1 cut(s) 806
NspV TTCGAA 1 cut(s) 398
PceI AGGCCT 1 cut(s) 251
PciSI GCTCTTC 1 cut(s) 1494
PcsI WCGNNNNNNNCGW 2 cut(s) 171, 347
PctI GAATGC 1 cut(s) 997
PdiI GCCGGC 1 cut(s) 609
PdmI GAANNNNTTC 2 cut(s) 44, 313
PfeI GAWTC 4 cut(s) 176, 185, 1043, 1109
PflFI GACNNNGTC 1 cut(s) 32
PfoI TCCNGGA 2 cut(s) 222, 237
PleI GAGTC 5 cut(s) 41, 217, 362, 418, 931
PluTI GGCGCC 1 cut(s) 288
PmaCI CACGTG 1 cut(s) 657
PmlI CACGTG 1 cut(s) 657
PpsI GAGTC 5 cut(s) 41, 217, 362, 418, 931
Ppu21I YACGTR 1 cut(s) 657
PsiI TTATAA 1 cut(s) 783
Psp6I CCWGG 1 cut(s) 1381
PspCI CACGTG 1 cut(s) 657
PspGI CCWGG 1 cut(s) 1381
PspN4I GGNNCC 4 cut(s) 286, 597, 1340, 1450
PspOMI GGGCCC 1 cut(s) 595
PsuI RGATCY 2 cut(s) 228, 1338
PsyI GACNNNGTC 1 cut(s) 32
RruI TCGCGA 1 cut(s) 23
RsaI GTAC 2 cut(s) 767, 1391
RsaNI GTAC 2 cut(s) 766, 1390
Rsr2I CGGWCCG 1 cut(s) 28
RsrII CGGWCCG 1 cut(s) 28
SapI GCTCTTC 1 cut(s) 1494
Sau3AI GATC 5 cut(s) 112, 228, 1080, 1268, 1338
SchI GAGTC 5 cut(s) 42, 218, 362, 419, 932
ScrFI CCNGG 5 cut(s) 224, 239, 619, 1333, 1383
SduI GDGCHC 3 cut(s) 599, 1052, 1474
SfaNI GCATC 2 cut(s) 472, 1043
SfiI GGCCNNNNNGGCC 1 cut(s) 68
SfoI GGCGCC 1 cut(s) 286
SfuI TTCGAA 1 cut(s) 398
SinI GGWCC 2 cut(s) 28, 1096
SmlI CTYRAG 1 cut(s) 962
SmoI CTYRAG 1 cut(s) 962
Sse9I AATT 4 cut(s) 589, 1063, 1183, 1393
SseBI AGGCCT 1 cut(s) 251
SspDI GGCGCC 1 cut(s) 284
SspI AATATT 1 cut(s) 1304
SspMI CTAG 6 cut(s) 56, 182, 206, 810, 1154, 1539
StuI AGGCCT 1 cut(s) 251
StyD4I CCNGG 5 cut(s) 222, 237, 617, 1331, 1381
StyI CCWWGG 3 cut(s) 291, 444, 507
TaaI ACNGT 2 cut(s) 313, 1417
TaiI ACGT 2 cut(s) 659, 704
TaqI TCGA 7 cut(s) 48, 162, 174, 216, 398, 587, 1046
TaqII GACCGA 1 cut(s) 45
TasI AATT 4 cut(s) 589, 1063, 1183, 1393
TatI WGTACW 1 cut(s) 765
TauI GCSGC 7 cut(s) 290, 641, 713, 1239, 1242, 1254, 1621
TfiI GAWTC 4 cut(s) 176, 185, 1043, 1109
TscAI CASTG 2 cut(s) 535, 1153
TseFI GTSAC 1 cut(s) 526
TseI GCWGC 7 cut(s) 806, 1031, 1190, 1193, 1242, 1295, 1535
Tsp45I GTSAC 1 cut(s) 526
TspDTI ATGAA 3 cut(s) 379, 1022, 1554
TspGWI ACGGA 2 cut(s) 41, 1461
TspRI CASTG 2 cut(s) 535, 1153
Tth111I GACNNNGTC 1 cut(s) 32
VpaK11BI GGWCC 2 cut(s) 28, 1096
XapI RAATTY 3 cut(s) 589, 1063, 1183
XbaI TCTAGA 1 cut(s) 1153
XceI RCATGY 1 cut(s) 806
XcmI CCANNNNNNNNNTGG 1 cut(s) 1583
XmnI GAANNNNTTC 2 cut(s) 44, 313
XspI CTAG 6 cut(s) 56, 182, 206, 810, 1154, 1539
Zsp2I ATGCAT 1 cut(s) 1315
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.