Pre-mRNA-splicing factor ATP-dependent RNA helicase
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g06762 |
| rosa_laevigata | RLG00000016199 |
| rosa_multiflora | Rmu_sc0002270.1_g000026 |
| rosa_rugosa | Rorug02G0015300 |
| rosa_samantha | Rh2BG073600 Rh2DG060200 Rh2DG071700 Rh6BG121500 Rh6CG119900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 94 |
| AciI | CCGC | 2 cut(s) | 28, 44 |
| AclWI | GGATC | 1 cut(s) | 44 |
| AcsI | RAATTY | 1 cut(s) | 120 |
| AjnI | CCWGG | 1 cut(s) | 175 |
| AlwI | GGATC | 1 cut(s) | 44 |
| ApoI | RAATTY | 1 cut(s) | 120 |
| BccI | CCATC | 2 cut(s) | 25, 61 |
| BciT130I | CCWGG | 1 cut(s) | 177 |
| Bme1390I | CCNGG | 1 cut(s) | 177 |
| BmrFI | CCNGG | 1 cut(s) | 177 |
| BmrI | ACTGGG | 1 cut(s) | 140 |
| BmuI | ACTGGG | 1 cut(s) | 140 |
| BpuEI | CTTGAG | 1 cut(s) | 180 |
| BsaJI | CCNNGG | 1 cut(s) | 176 |
| Bse1I | ACTGG | 1 cut(s) | 135 |
| Bse3DI | GCAATG | 1 cut(s) | 149 |
| BseBI | CCWGG | 1 cut(s) | 177 |
| BseDI | CCNNGG | 1 cut(s) | 176 |
| BseGI | GGATG | 1 cut(s) | 36 |
| BseMI | GCAATG | 1 cut(s) | 149 |
| BseNI | ACTGG | 1 cut(s) | 135 |
| BslFI | GGGAC | 1 cut(s) | 148 |
| BsmFI | GGGAC | 1 cut(s) | 148 |
| Bsp143I | GATC | 2 cut(s) | 49, 144 |
| BspACI | CCGC | 2 cut(s) | 28, 44 |
| BspPI | GGATC | 1 cut(s) | 44 |
| BsrDI | GCAATG | 1 cut(s) | 149 |
| BsrI | ACTGG | 1 cut(s) | 135 |
| BssECI | CCNNGG | 1 cut(s) | 176 |
| BssMI | GATC | 2 cut(s) | 49, 144 |
| Bst2UI | CCWGG | 1 cut(s) | 177 |
| BstDEI | CTNAG | 1 cut(s) | 63 |
| BstF5I | GGATG | 1 cut(s) | 36 |
| BstKTI | GATC | 2 cut(s) | 52, 147 |
| BstMBI | GATC | 2 cut(s) | 49, 144 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 109 |
| BstNI | CCWGG | 1 cut(s) | 177 |
| BstSCI | CCNGG | 1 cut(s) | 175 |
| BtsCI | GGATG | 1 cut(s) | 36 |
| BtsIMutI | CAGTG | 1 cut(s) | 128 |
| CseI | GACGC | 1 cut(s) | 145 |
| DdeI | CTNAG | 1 cut(s) | 63 |
| DpnI | GATC | 2 cut(s) | 51, 146 |
| DpnII | GATC | 2 cut(s) | 49, 144 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 94 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 94 |
| EciI | GGCGGA | 1 cut(s) | 43 |
| EcoRII | CCWGG | 1 cut(s) | 175 |
| FaiI | YATR | 4 cut(s) | 101, 212, 221, 223 |
| FaqI | GGGAC | 1 cut(s) | 148 |
| FokI | GGATG | 1 cut(s) | 43 |
| HgaI | GACGC | 1 cut(s) | 145 |
| HincII | GTYRAC | 1 cut(s) | 12 |
| HindII | GTYRAC | 1 cut(s) | 12 |
| Hpy166II | GTNNAC | 2 cut(s) | 12, 168 |
| Hpy188I | TCNGA | 1 cut(s) | 82 |
| Hpy8I | GTNNAC | 2 cut(s) | 12, 168 |
| HpyAV | CCTTC | 1 cut(s) | 110 |
| HpyCH4V | TGCA | 1 cut(s) | 112 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 109 |
| HpyF3I | CTNAG | 1 cut(s) | 63 |
| Kzo9I | GATC | 2 cut(s) | 49, 144 |
| LpnPI | CCDG | 5 cut(s) | 70, 116, 125, 162, 189 |
| MalI | GATC | 2 cut(s) | 51, 146 |
| MboI | GATC | 2 cut(s) | 49, 144 |
| MluCI | AATT | 1 cut(s) | 120 |
| MseI | TTAA | 1 cut(s) | 161 |
| MspR9I | CCNGG | 1 cut(s) | 177 |
| MvaI | CCWGG | 1 cut(s) | 177 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 109 |
| NdeII | GATC | 2 cut(s) | 49, 144 |
| Psp6I | CCWGG | 1 cut(s) | 175 |
| PspGI | CCWGG | 1 cut(s) | 175 |
| SaqAI | TTAA | 1 cut(s) | 161 |
| Sau3AI | GATC | 2 cut(s) | 49, 144 |
| ScrFI | CCNGG | 1 cut(s) | 177 |
| SetI | ASST | 1 cut(s) | 178 |
| SmlI | CTYRAG | 1 cut(s) | 195 |
| SmoI | CTYRAG | 1 cut(s) | 195 |
| Sse9I | AATT | 1 cut(s) | 120 |
| SsiI | CCGC | 2 cut(s) | 28, 44 |
| StyD4I | CCNGG | 1 cut(s) | 175 |
| TasI | AATT | 1 cut(s) | 120 |
| Tru1I | TTAA | 1 cut(s) | 161 |
| Tru9I | TTAA | 1 cut(s) | 161 |
| TscAI | CASTG | 1 cut(s) | 135 |
| TspRI | CASTG | 1 cut(s) | 135 |
| XapI | RAATTY | 1 cut(s) | 120 |