Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0015503

Physical Location & Seq

Genomic Coordinates Forward (+)

5078055 .. 5081631

Gene Structure 3577 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g09453.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3012 bp

ATGGCAGAAACCTCTGGGCGTAAGCTGATCGTTGAAGTCTGCAACGCCAAGAATTTAATGCCGAAAGATGGTCAAGGAACGGCGAGTGCTTATGCCATGGTGGACTTCGACGGGCAGAGACGGCGAACCAAGACCAAACAGAGAGATCTCAACCCGGAATGGGACGAGAAGCTCGAGTTTCTAGTCCATGACATTGAGTCCATGGGCTCCCAGATACTGGAAGTCAATATCTACAACGACAAGAAGAACAGTGGGAAACGAAGCACTTTTCTTGGCAAAGTCAAGATCCCGGGCTCTACCTTTGTGAAAGCAGAGCCGGAGAACACACTCGTTTACTTCCCCTTGGAGAAAAGGAGCGTGTTTTCTCAGATCAAAGGCGAGTTGGGATTGAAGATTTACTATATCGATGAAGACCCACCAGCTGCTGCGGCGGCGGATGACAAGAAACCGGCAGCGGAGGAGAAGCCGCCGGAAAAGCCAAAGGAGGAGGAAAAGAAGCAAGAAGAGGAGAAGCCGAAAGAGGAGATCAAACCAGCAGAAGAAGACAAACCGAAGGAGGAGGCTAATAAACCAGCAGAGGACAAGGCCACTGTAGCACCGGAATCAAAAACAGAGGAAGCAGCTTCTTCAGCGGTTGCTGCTCCGCCGCCAGAGGTTGAGAACCCGCCGATTGCTTACTCTGAGAAGCCAAATCATCAAGACAAGGTTGTAGAGAGGTCGACGGATGTGAGGATTAACGAGATGGAGCTTCAACCATTGGCCCGGGATAGAAATCGGAGCGCGTACGATCTCGTAGTCAGGATGCCGTTTCTTTTCGTGAAAGTTGTCAAAGCCAAAAGAGCAGACGCTACTACAAATCCATCGGCATCTCTTTACGCCAAGCTTGTAATTGGTACGCATACCATCAAAACCAAGACACAAAGCAGCAACAAAGATTGGGACCAAGTCTTTGCTTTCGACAAAGAGGGTCTCAATTCCACCTCTTTAGAAGTGTCTGTGTGGGCCGAAGAGGAGATCAAGAAGGAAGGAGAAGAAGCTCCCACTCTTACAGAGACTAGTCTCGGAATGGTGTCTTTCGATTTGCAGGAGGTGCCCAAGCGAGTTCCACCGGACAGTCCTCTAGCTCCACAGTGGTACACTCTCGACTCTGAAAAGTCTCCGGGAAATGACGTCATGCTCACTGTCTGGATCGGCACTCAGGCCGACGAAGCATTCCAAGAGGCTTGGCAGTCGGATTCCGGCGGGTTGATACCGGAGACCCGAGCAAAGGTTTATTTGTCTCCGAAGCTCTGGTACTTGAGAGTAACGGTCATCCAAACCCAAGATCTCCAGCTAGGCTCGGGATCCGAGGCTAACAAGAAGGTTCGGAATCCCGAACTTTCCGTGAAGGCTCATTTCGGGGCCCAGCTTTTCAAAACGAGTAGGACCTCCGTGGGGTCCACCTTGTCGAGCTCATCCAACCCCACCTGGAACGAAGACTTGGTTTTTGTAGCAGCCGAGCCGTTTGAGCCGTACATGACTGTGACCGTAGAAGATGTAAGCAACGGTCAATCTGTGGGGCACACCAAGCTTCACGTGCCAAGCGTTGAGAAGAGAACAGACGACCGTGCGGAGCCCAAGTCCAGATGGTTCAACTTGATTGGTGATGAGGCGCGTCCTTACGCCGGTAGGATACACCTGCGGGTTTGTCTAGAAGGAGGCTATCACGTGCTGGACGAGGCTGCTCACGTGACGAGTGACGTCAGAGCTGCGGCAAAGCAGCTGGCGAAACCTGCCATCGGCTTACTTGAAGTCGGAATTCGCGGGGCCACCAATCTGCTTCCGGTCAAGGTCAAAAATGGGATGCGTGGGTCAACTGATACTTACGTGGTTGCCAAATATGGGCCGAAATGGGTCCGAACCCGGACGATTCTGGACCGGTTCAACCCGCGGTGGAACGAGCAGTACACTTGGGATGTGTACGATCCATGCACTGTTCTCACTATCGGCGTCTTCGATAATGGAAGGTACAGGCAACCCGAACCCGAGAAAGATATTCGGATCGGAAAGATACGAGTACGGCTATCCACTCTTGATATGAATCGTGTTTACATGAACTCGTATTCTCTTACTGTGTTGCTTCCCGGTGGGGCTAGGAAAATGGGGGAGATAGAGATAGCCGTTAGGTTTTCATGCTCGTCGTGGCTGAGTGTGGTCCAAGCCTACAGCACCCCAATGCTTCCGAGAATGCATTACGTGAAACCAATGGGCCCGGCCCAACAAGACATTCTACGACATACGGCTATGAAGATTGTGACGGCTAGGCTGGGGAGGTCGGAGCCACCGCTGGGTCAGGAAGTGGTTCAGTTCATGCTCGACTCGGATACACACGTGTGGAGCATGAGGAGAAGTAAGGCCAACTGGTTTCGGGTGGTGGCGTGTTTGTCACGTGTGGCGACACTCGCGCGGTGGATGGATGGGATTCGCACGTGGCGGCATACGCCCACGACGGTTTTGATGCACGCGCTGCTGGTGGCTGTGGTGCTATGCCCGCATTTGATACTTCCGACCGTATTCATGTACGTCTTCCTCATCTTATTGGTGAGATTGCGGTATCGTCATAGAGTGCCGTCAAATATGGACCCTCGGATCTCTTATGTTGACGCCGTGAGCCCTGATGAGTTGGACGAAGAGCTTGATGGGTTCCCCTCCACTCGACCCGCAGACACGATCCGAATACGATACGATCGACTGCGGGCTTTAGGTGGGAGGGCCCAAACTTTGTTGGGCGACGTAGCGGCCCAAGGAGAGCGTCTGGAGGCCTTGTTTTATTGGAGGGATCCCAGGGCAACCGGAATCTTTGTGGTGTTCTGTTTCTTGGCGTCTTTGGTGTTTTACGTGGTGCCGTTCAAGGCTTTTGTGTTGGGGTCAGGGTTCTATTACTTGCGCCACCCTAGGTTCCGTCACGATATGCCATCACTTTCCACCAACTTTTTTCGGCGACTTCCATCCTCGTCTGACCAGATCATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000149 GO:0001505 GO:0003674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006810 GO:0006836 GO:0006887 GO:0007154 GO:0007267 GO:0007268 GO:0007269 GO:0008021 GO:0008150 GO:0009987 GO:0010646 GO:0012505 GO:0012506 GO:0016020 GO:0016043 GO:0016079 GO:0016082 GO:0016192 GO:0017075 GO:0017156 GO:0019905 GO:0022607 GO:0023051 GO:0023052 GO:0023061 GO:0030133 GO:0030424 GO:0030658 GO:0030659 GO:0030672 GO:0031090 GO:0031410 GO:0031982 GO:0032879 GO:0032940 GO:0033267 GO:0034622 GO:0042995 GO:0043005 GO:0043195 GO:0043226 GO:0043227 GO:0043229 GO:0043679 GO:0043933 GO:0044085 GO:0044306 GO:0044422 GO:0044424 GO:0044433 GO:0044444 GO:0044446 GO:0044456 GO:0044463 GO:0044464 GO:0045055 GO:0045202 GO:0046903 GO:0046907 GO:0046928 GO:0048489 GO:0048786 GO:0050789 GO:0050794 GO:0050804 GO:0051046 GO:0051049 GO:0051179 GO:0051234 GO:0051588 GO:0051640 GO:0051641 GO:0051648 GO:0051649 GO:0051650 GO:0051656 GO:0060341 GO:0065003 GO:0065007 GO:0065008 GO:0070382 GO:0071840 GO:0071944 GO:0097458 GO:0097479 GO:0097480 GO:0097708 GO:0098588 GO:0098793 GO:0098805 GO:0098916 GO:0099003 GO:0099177 GO:0099501 GO:0099503 GO:0099504 GO:0099536 GO:0099537 GO:0099643 GO:0120025 GO:0120038 GO:0140029 GO:0150034 GO:1903530

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 PRT_C

Protein Analysis

1004

Amino Acids

113.16

Weight (kDa)

8.31

Isoelectric Point (pI)

50.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	8 - 107	7.2e-19	C2 domain
C2	PF00168	271 - 380	8.2e-07	C2 domain
C2	PF00168	431 - 545	1.4e-07	C2 domain
C2	PF00168	594 - 703	3.6e-18	C2 domain
PRT_C	PF08372	848 - 1003	2e-68	Plant phosphoribosyltransferase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0015503)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03680
fragaria_vesca	FvH4_1g09453
malus_domestica	MD12G1012200.v1.1
prunus_persica	Prupe.7G016100_v2.0.a1
pyrus_communis	pycom12g00950
rosa_chinensis	RchiOBHm_Chr3g0495971
rosa_laevigata	RLG00000022574
rosa_multiflora	Rmu_co8400599.1_g000001 Rmu_sc0000334.1_g000055
rosa_roxburghii	Rroxscaffold_6G00389670
rosa_rugosa	Rorug03G0278600
rosa_samantha	Rh3AG325400 Rh3BG362000 Rh3CG358000 Rh3DG361300
rosa_wichuraiana	Rw3G028450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1686
AatII	GACGTC	2 cut(s)	1173, 1743
Acc36I	ACCTGC	2 cut(s)	1686, 1780
AccB1I	GGYRCC	2 cut(s)	1090, 2881
AccB7I	CCANNNNNTGG	1 cut(s)	217
AccI	GTMKAC	1 cut(s)	719
AccII	CGCG	7 cut(s)	782, 1654, 1803, 1930, 2444, 2446, 2504
AcsI	RAATTY	2 cut(s)	52, 1797
AcuI	CTGAAG	1 cut(s)	612
AcvI	CACGTG	6 cut(s)	1576, 1708, 1729, 2371, 2429, 2469
AcyI	GRCGYC	5 cut(s)	1170, 1740, 1989, 2643, 2861
AfiI	CCNNNNNNNGG	9 cut(s)	68, 160, 217, 1267, 1434, 1664, 1778, 1881, 2327
AflIII	ACRYGT	3 cut(s)	2368, 2370, 2428
AgeI	ACCGGT	1 cut(s)	1917
AgsI	TTSAA	8 cut(s)	35, 391, 752, 1414, 1633, 1790, 1924, 2890
AhdI	GACNNNNNGTC	1 cut(s)	196
AhlI	ACTAGT	1 cut(s)	1055
AjnI	CCWGG	2 cut(s)	1466, 2822
AjuI	GAANNNNNNNTTGG	4 cut(s)	1463, 1495, 2250, 2282
AleI	CACNNNNGTG	1 cut(s)	2371
Alw21I	GWGCWC	1 cut(s)	1454
Alw26I	GTCTC	7 cut(s)	112, 974, 1046, 1064, 1161, 1250, 1284
AlwNI	CAGNNNCTG	2 cut(s)	217, 425
Ama87I	CYCGRG	6 cut(s)	173, 289, 762, 1260, 1339, 2024
ApaI	GGGCCC	3 cut(s)	1405, 2252, 2755
ApoI	RAATTY	2 cut(s)	52, 1797
ArsI	GACNNNNNNTTYG	4 cut(s)	932, 964, 1469, 1501
AsiGI	ACCGGT	1 cut(s)	1917
Asp700I	GAANNNNTTC	1 cut(s)	2340
AspA2I	CCTAGG	1 cut(s)	2933
AspLEI	GCGC	5 cut(s)	782, 1654, 2446, 2506, 2928
AsuC2I	CCSGG	9 cut(s)	155, 290, 291, 763, 764, 1161, 1903, 2124, 2252
AsuHPI	GGTGA	2 cut(s)	1655, 2593
AvaI	CYCGRG	6 cut(s)	173, 289, 762, 1260, 1339, 2024
AvaII	GGWCC	7 cut(s)	940, 1425, 1437, 1894, 1915, 2194, 2620
AvrII	CCTAGG	1 cut(s)	2933
BaeGI	GKGCMC	5 cut(s)	1095, 1405, 1563, 2252, 2755
BaeI	ACNNNNGTAYC	4 cut(s)	1851, 1884, 2355, 2388
BamHI	GGATCC	2 cut(s)	1343, 2818
BanI	GGYRCC	2 cut(s)	1090, 2881
BanII	GRGCYC	8 cut(s)	209, 296, 1405, 1454, 1617, 2252, 2654, 2755
BarI	GAAGNNNNNNTAC	2 cut(s)	1277, 1309
BbrPI	CACGTG	6 cut(s)	1576, 1708, 1729, 2371, 2429, 2469
BbsI	GAAGAC	5 cut(s)	417, 549, 1482, 1984, 2557
Bbv12I	GWGCWC	1 cut(s)	1454
BciT130I	CCWGG	2 cut(s)	1468, 2824
BciVI	GTATCC	2 cut(s)	1665, 2356
BcnI	CCSGG	9 cut(s)	155, 290, 291, 763, 764, 1161, 1903, 2124, 2252
BcoDI	GTCTC	7 cut(s)	112, 974, 1046, 1064, 1161, 1250, 1284
BcuI	ACTAGT	1 cut(s)	1055
BfaI	CTAG	8 cut(s)	182, 1056, 1121, 1334, 1691, 2133, 2301, 2934
BfmI	CTRYAG	2 cut(s)	591, 2203
BfuAI	ACCTGC	2 cut(s)	1686, 1780
BfuI	GTATCC	2 cut(s)	1665, 2356
BglII	AGATCT	2 cut(s)	145, 1324
BlnI	CCTAGG	1 cut(s)	2933
Bme18I	GGWCC	7 cut(s)	940, 1425, 1437, 1894, 1915, 2194, 2620
BmeRI	GACNNNNNGTC	1 cut(s)	196
BmeT110I	CYCGRG	6 cut(s)	173, 289, 762, 1260, 1339, 2024
BmsI	GCATC	4 cut(s)	792, 875, 1833, 2487
BpiI	GAAGAC	5 cut(s)	417, 549, 1482, 1984, 2557
BpmI	CTGGAG	2 cut(s)	1313, 2816
BpuEI	CTTGAG	1 cut(s)	1318
BpuMI	CCSGG	9 cut(s)	155, 290, 291, 763, 764, 1161, 1903, 2124, 2252
Bsa29I	ATCGAT	1 cut(s)	405
BsaAI	YACGTR	9 cut(s)	1576, 1708, 1729, 1867, 2236, 2371, 2429, 2469, 2878
BsaBI	GATNNNNATC	2 cut(s)	771, 2079
BsaHI	GRCGYC	5 cut(s)	1170, 1740, 1989, 2643, 2861
BsaI	GGTCTC	2 cut(s)	974, 1250
BsaWI	WCCGGW	6 cut(s)	598, 1108, 1252, 1822, 1917, 2831
BsaXI	ACNNNNNCTCC	4 cut(s)	1604, 1634, 2789, 2819
Bsc4I	CCNNNNNNNGG	9 cut(s)	68, 160, 217, 1267, 1434, 1664, 1778, 1881, 2327
Bse118I	RCCGGY	3 cut(s)	448, 1664, 1917
Bse1I	ACTGG	2 cut(s)	222, 2405
Bse8I	GATNNNNATC	2 cut(s)	771, 2079
BseBI	CCWGG	2 cut(s)	1468, 2824
BseCI	ATCGAT	1 cut(s)	405
BseJI	GATNNNNATC	2 cut(s)	771, 2079
BseLI	CCNNNNNNNGG	9 cut(s)	68, 160, 217, 1267, 1434, 1664, 1778, 1881, 2327
BseMII	CTCAG	4 cut(s)	380, 672, 1211, 2177
BseNI	ACTGG	2 cut(s)	222, 2405
BseRI	GAGGAG	7 cut(s)	473, 500, 521, 536, 572, 1025, 2398
BseSI	GKGCMC	5 cut(s)	1095, 1405, 1563, 2252, 2755
BseYI	CCCAGC	3 cut(s)	1404, 2305, 2326
Bsh1236I	CGCG	7 cut(s)	782, 1654, 1803, 1930, 2444, 2446, 2504
Bsh1285I	CGRYCG	3 cut(s)	1606, 2550, 2728
BshNI	GGYRCC	2 cut(s)	1090, 2881
BshTI	ACCGGT	1 cut(s)	1917
BshVI	ATCGAT	1 cut(s)	405
BsiEI	CGRYCG	3 cut(s)	1606, 2550, 2728
BsiHKAI	GWGCWC	1 cut(s)	1454
BsiHKCI	CYCGRG	6 cut(s)	173, 289, 762, 1260, 1339, 2024
BsiWI	CGTACG	1 cut(s)	783
BslFI	GGGAC	2 cut(s)	176, 953
BslI	CCNNNNNNNGG	9 cut(s)	68, 160, 217, 1267, 1434, 1664, 1778, 1881, 2327
BsmAI	GTCTC	7 cut(s)	112, 974, 1046, 1064, 1161, 1250, 1284
BsmBI	CGTCTC	1 cut(s)	112
BsmFI	GGGAC	2 cut(s)	176, 953
BsmI	GAATGC	2 cut(s)	1211, 2232
Bso31I	GGTCTC	2 cut(s)	974, 1250
BsoBI	CYCGRG	6 cut(s)	173, 289, 762, 1260, 1339, 2024
Bsp120I	GGGCCC	3 cut(s)	1401, 2248, 2751
Bsp19I	CCATGG	2 cut(s)	96, 201
BspCNI	CTCAG	4 cut(s)	379, 673, 1210, 2178
BspDI	ATCGAT	1 cut(s)	405
BspFNI	CGCG	7 cut(s)	782, 1654, 1803, 1930, 2444, 2446, 2504
BspMI	ACCTGC	2 cut(s)	1686, 1780
BspQI	GCTCTTC	1 cut(s)	2664
BspT107I	GGYRCC	2 cut(s)	1090, 2881
BspTNI	GGTCTC	2 cut(s)	974, 1250
BsrFI	RCCGGY	3 cut(s)	448, 1664, 1917
BsrI	ACTGG	2 cut(s)	222, 2405
BssAI	RCCGGY	3 cut(s)	448, 1664, 1917
BssNI	GRCGYC	5 cut(s)	1170, 1740, 1989, 2643, 2861
BssT1I	CCWWGG	5 cut(s)	96, 201, 342, 2782, 2933
Bst2UI	CCWGG	2 cut(s)	1468, 2824
Bst6I	CTCTTC	4 cut(s)	498, 1002, 1586, 2664
BstACI	GRCGYC	5 cut(s)	1170, 1740, 1989, 2643, 2861
BstAPI	GCANNNNNTGC	2 cut(s)	1090, 2506
BstBAI	YACGTR	9 cut(s)	1576, 1708, 1729, 1867, 2236, 2371, 2429, 2469, 2878
BstC8I	GCNNGC	4 cut(s)	1764, 2502, 2531, 2736
BstDEI	CTNAG	4 cut(s)	366, 681, 1197, 2186
BstDSI	CCRYGG	4 cut(s)	96, 201, 1431, 1928
BstFNI	CGCG	7 cut(s)	782, 1654, 1803, 1930, 2444, 2446, 2504
BstHHI	GCGC	5 cut(s)	782, 1654, 2446, 2506, 2928
BstMAI	GTCTC	7 cut(s)	112, 974, 1046, 1064, 1161, 1250, 1284
BstMCI	CGRYCG	3 cut(s)	1606, 2550, 2728
BstNI	CCWGG	2 cut(s)	1468, 2824
BstSFI	CTRYAG	2 cut(s)	591, 2203
BstSLI	GKGCMC	5 cut(s)	1095, 1405, 1563, 2252, 2755
BstUI	CGCG	7 cut(s)	782, 1654, 1803, 1930, 2444, 2446, 2504
BstV2I	GAAGAC	5 cut(s)	417, 549, 1482, 1984, 2557
BstX2I	RGATCY	6 cut(s)	145, 285, 1324, 1343, 2628, 2818
BstYI	RGATCY	6 cut(s)	145, 285, 1324, 1343, 2628, 2818
Bsu15I	ATCGAT	1 cut(s)	405
BsuI	GTATCC	2 cut(s)	1665, 2356
BsuTUI	ATCGAT	1 cut(s)	405
BtgI	CCRYGG	4 cut(s)	96, 201, 1431, 1928
BtsIMutI	CAGTG	5 cut(s)	256, 588, 1136, 1179, 1971
BveI	ACCTGC	2 cut(s)	1686, 1780
Cac8I	GCNNGC	4 cut(s)	1764, 2502, 2531, 2736
CaiI	CAGNNNCTG	2 cut(s)	217, 425
CfoI	GCGC	5 cut(s)	782, 1654, 2446, 2506, 2928
Cfr10I	RCCGGY	3 cut(s)	448, 1664, 1917
Cfr42I	CCGCGG	1 cut(s)	1931
Cfr9I	CCCGGG	2 cut(s)	289, 762
ClaI	ATCGAT	1 cut(s)	405
CseI	GACGC	6 cut(s)	854, 1643, 1978, 2651, 2780, 2850
CspAI	ACCGGT	1 cut(s)	1917
DdeI	CTNAG	4 cut(s)	366, 681, 1197, 2186
DriI	GACNNNNNGTC	1 cut(s)	196
Eam1104I	CTCTTC	4 cut(s)	498, 1002, 1586, 2664
Eam1105I	GACNNNNNGTC	1 cut(s)	196
EarI	CTCTTC	4 cut(s)	498, 1002, 1586, 2664
EciI	GGCGGA	2 cut(s)	449, 633
Ecl136II	GAGCTC	1 cut(s)	1452
Eco130I	CCWWGG	5 cut(s)	96, 201, 342, 2782, 2933
Eco147I	AGGCCT	1 cut(s)	2801
Eco24I	GRGCYC	8 cut(s)	209, 296, 1405, 1454, 1617, 2252, 2654, 2755
Eco31I	GGTCTC	2 cut(s)	974, 1250
Eco47I	GGWCC	7 cut(s)	940, 1425, 1437, 1894, 1915, 2194, 2620
Eco53kI	GAGCTC	1 cut(s)	1452
Eco57I	CTGAAG	1 cut(s)	612
Eco72I	CACGTG	6 cut(s)	1576, 1708, 1729, 2371, 2429, 2469
Eco88I	CYCGRG	6 cut(s)	173, 289, 762, 1260, 1339, 2024
EcoICRI	GAGCTC	1 cut(s)	1452
EcoO109I	RGGNCCY	3 cut(s)	1401, 1425, 2751
EcoRI	GAATTC	1 cut(s)	1797
EcoRII	CCWGG	2 cut(s)	1466, 2822
EcoT14I	CCWWGG	5 cut(s)	96, 201, 342, 2782, 2933
EcoT22I	ATGCAT	1 cut(s)	2232
EcoT38I	GRGCYC	8 cut(s)	209, 296, 1405, 1454, 1617, 2252, 2654, 2755
ErhI	CCWWGG	5 cut(s)	96, 201, 342, 2782, 2933
Esp3I	CGTCTC	1 cut(s)	112
FaqI	GGGAC	2 cut(s)	176, 953
FauI	CCCGC	8 cut(s)	672, 1235, 1674, 1796, 1935, 2538, 2707, 2727
FblI	GTMKAC	1 cut(s)	719
FriOI	GRGCYC	8 cut(s)	209, 296, 1405, 1454, 1617, 2252, 2654, 2755
FspBI	CTAG	8 cut(s)	182, 1056, 1121, 1334, 1691, 2133, 2301, 2934
GlaI	GCGC	5 cut(s)	781, 1653, 2445, 2505, 2927
GsaI	CCCAGC	3 cut(s)	1408, 2309, 2330
GsuI	CTGGAG	2 cut(s)	1313, 2816
HgaI	GACGC	6 cut(s)	854, 1643, 1978, 2651, 2780, 2850
HhaI	GCGC	5 cut(s)	782, 1654, 2446, 2506, 2928
Hin1I	GRCGYC	5 cut(s)	1170, 1740, 1989, 2643, 2861
Hin6I	GCGC	5 cut(s)	780, 1652, 2444, 2504, 2926
HinP1I	GCGC	5 cut(s)	780, 1652, 2444, 2504, 2926
HincII	GTYRAC	3 cut(s)	720, 1854, 2641
HindII	GTYRAC	3 cut(s)	720, 1854, 2641
HindIII	AAGCTT	2 cut(s)	881, 1568
HphI	GGTGA	2 cut(s)	1655, 2593
Hpy99I	CGWCG	6 cut(s)	113, 724, 1208, 2182, 2491, 2774
HpyAV	CCTTC	7 cut(s)	547, 1015, 1019, 1354, 1381, 1688, 1998
HpyCH4V	TGCA	5 cut(s)	42, 1084, 1971, 2230, 2500
HpyF3I	CTNAG	4 cut(s)	366, 681, 1197, 2186
Hsp92I	GRCGYC	5 cut(s)	1170, 1740, 1989, 2643, 2861
HspAI	GCGC	5 cut(s)	780, 1652, 2444, 2504, 2926
KspI	CCGCGG	1 cut(s)	1931
LguI	GCTCTTC	1 cut(s)	2664
LweI	GCATC	4 cut(s)	792, 875, 1833, 2487
MaeI	CTAG	8 cut(s)	182, 1056, 1121, 1334, 1691, 2133, 2301, 2934
MaeIII	GTNAC	7 cut(s)	1303, 1522, 1729, 1736, 2293, 2424, 2942
MflI	RGATCY	6 cut(s)	145, 285, 1324, 1343, 2628, 2818
MluCI	AATT	4 cut(s)	52, 888, 973, 1797
MlyI	GAGTC	3 cut(s)	206, 1139, 2351
MmeI	TCCRAC	6 cut(s)	1212, 1482, 1774, 2295, 2570, 2643
Mph1103I	ATGCAT	1 cut(s)	2232
MroXI	GAANNNNTTC	1 cut(s)	2340
MseI	TTAA	2 cut(s)	56, 735
MslI	CAYNNNNRTG	3 cut(s)	1520, 2213, 2371
MspA1I	CMGCKG	6 cut(s)	422, 455, 632, 1762, 1930, 2326
Mva1269I	GAATGC	2 cut(s)	1211, 2232
MvaI	CCWGG	2 cut(s)	1468, 2824
MvnI	CGCG	7 cut(s)	782, 1654, 1803, 1930, 2444, 2446, 2504
NciI	CCSGG	9 cut(s)	155, 290, 291, 763, 764, 1161, 1903, 2124, 2252
NcoI	CCATGG	2 cut(s)	96, 201
NmeAIII	GCCGAG	1 cut(s)	1522
NmuCI	GTSAC	6 cut(s)	1522, 1729, 1736, 2293, 2424, 2942
NsiI	ATGCAT	1 cut(s)	2232
OliI	CACNNNNGTG	1 cut(s)	2371
PaeR7I	CTCGAG	1 cut(s)	173
PaqCI	CACCTGC	1 cut(s)	1686
PasI	CCCWGGG	1 cut(s)	2823
PceI	AGGCCT	1 cut(s)	2801
PciSI	GCTCTTC	1 cut(s)	2664
PcsI	WCGNNNNNNNCGW	5 cut(s)	171, 1581, 1713, 1992, 2725
PctI	GAATGC	2 cut(s)	1211, 2232
PdmI	GAANNNNTTC	1 cut(s)	2340
PfeI	GAWTC	7 cut(s)	602, 1235, 1369, 1909, 2080, 2461, 2835
Pfl23II	CGTACG	1 cut(s)	783
PflFI	GACNNNGTC	1 cut(s)	944
PflMI	CCANNNNNTGG	1 cut(s)	217
PfoI	TCCNGGA	1 cut(s)	1159
PinAI	ACCGGT	1 cut(s)	1917
Ple19I	CGATCG	1 cut(s)	2728
PleI	GAGTC	3 cut(s)	205, 1139, 2351
PmaCI	CACGTG	6 cut(s)	1576, 1708, 1729, 2371, 2429, 2469
PmlI	CACGTG	6 cut(s)	1576, 1708, 1729, 2371, 2429, 2469
PpsI	GAGTC	3 cut(s)	205, 1139, 2351
Ppu21I	YACGTR	9 cut(s)	1576, 1708, 1729, 1867, 2236, 2371, 2429, 2469, 2878
PpuMI	RGGWCCY	1 cut(s)	1425
Psp124BI	GAGCTC	1 cut(s)	1454
Psp5II	RGGWCCY	1 cut(s)	1425
Psp6I	CCWGG	2 cut(s)	1466, 2822
PspCI	CACGTG	6 cut(s)	1576, 1708, 1729, 2371, 2429, 2469
PspFI	CCCAGC	3 cut(s)	1404, 2305, 2326
PspGI	CCWGG	2 cut(s)	1466, 2822
PspLI	CGTACG	1 cut(s)	783
PspOMI	GGGCCC	3 cut(s)	1401, 2248, 2751
PspPPI	RGGWCCY	1 cut(s)	1425
PspXI	VCTCGAGB	1 cut(s)	173
PsrI	GAACNNNNNNTAC	2 cut(s)	1928, 1960
PstNI	CAGNNNCTG	2 cut(s)	217, 425
PsuI	RGATCY	6 cut(s)	145, 285, 1324, 1343, 2628, 2818
PsyI	GACNNNGTC	1 cut(s)	944
PvuI	CGATCG	1 cut(s)	2728
PvuII	CAGCTG	2 cut(s)	422, 1762
RseI	CAYNNNNRTG	3 cut(s)	1520, 2213, 2371
SacI	GAGCTC	1 cut(s)	1454
SacII	CCGCGG	1 cut(s)	1931
SalI	GTCGAC	1 cut(s)	718
SapI	GCTCTTC	1 cut(s)	2664
SaqAI	TTAA	2 cut(s)	56, 735
SchI	GAGTC	3 cut(s)	206, 1139, 2351
SfaNI	GCATC	4 cut(s)	792, 875, 1833, 2487
SfcI	CTRYAG	2 cut(s)	591, 2203
Sfr274I	CTCGAG	1 cut(s)	173
Sfr303I	CCGCGG	1 cut(s)	1931
SgrBI	CCGCGG	1 cut(s)	1931
SinI	GGWCC	7 cut(s)	940, 1425, 1437, 1894, 1915, 2194, 2620
SlaI	CTCGAG	1 cut(s)	173
SmaI	CCCGGG	2 cut(s)	291, 764
SmiMI	CAYNNNNRTG	3 cut(s)	1520, 2213, 2371
SmlI	CTYRAG	2 cut(s)	173, 1297
SmoI	CTYRAG	2 cut(s)	173, 1297
SpeI	ACTAGT	1 cut(s)	1055
Sse9I	AATT	4 cut(s)	52, 888, 973, 1797
SseBI	AGGCCT	1 cut(s)	2801
SspMI	CTAG	8 cut(s)	182, 1056, 1121, 1334, 1691, 2133, 2301, 2934
SstI	GAGCTC	1 cut(s)	1454
StuI	AGGCCT	1 cut(s)	2801
StyI	CCWWGG	5 cut(s)	96, 201, 342, 2782, 2933
TasI	AATT	4 cut(s)	52, 888, 973, 1797
TatI	WGTACW	1 cut(s)	1944
TauI	GCSGC	7 cut(s)	431, 434, 469, 649, 1754, 2476, 2780
TfiI	GAWTC	7 cut(s)	602, 1235, 1369, 1909, 2080, 2461, 2835
Tru1I	TTAA	2 cut(s)	56, 735
Tru9I	TTAA	2 cut(s)	56, 735
TscAI	CASTG	5 cut(s)	256, 595, 1136, 1186, 1978
TseFI	GTSAC	6 cut(s)	1522, 1729, 1736, 2293, 2424, 2942
Tsp45I	GTSAC	6 cut(s)	1522, 1729, 1736, 2293, 2424, 2942
TspDTI	ATGAA	7 cut(s)	423, 2093, 2108, 2160, 2300, 2338, 2545
TspGWI	ACGGA	4 cut(s)	737, 1372, 1420, 2930
TspMI	CCCGGG	2 cut(s)	289, 762
TspRI	CASTG	5 cut(s)	256, 595, 1136, 1186, 1978
Tth111I	GACNNNGTC	1 cut(s)	944
Van91I	CCANNNNNTGG	1 cut(s)	217
VpaK11BI	GGWCC	7 cut(s)	940, 1425, 1437, 1894, 1915, 2194, 2620
XapI	RAATTY	2 cut(s)	52, 1797
XbaI	TCTAGA	1 cut(s)	1690
XhoI	CTCGAG	1 cut(s)	173
XmaI	CCCGGG	2 cut(s)	289, 762
XmaJI	CCTAGG	1 cut(s)	2933
XmiI	GTMKAC	1 cut(s)	719
XmnI	GAANNNNTTC	1 cut(s)	2340
XspI	CTAG	8 cut(s)	182, 1056, 1121, 1334, 1691, 2133, 2301, 2934
ZraI	GACGTC	2 cut(s)	1171, 1741
Zsp2I	ATGCAT	1 cut(s)	2232

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.