Rorug03G0278600

Guanosine nucleotide diphosphate dissociation inhibitor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0002570
Physical Location & Seq
Forward (+)
27629156 .. 27645776
16621 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0278600.1

Sequence Viewer

Length: 4032 bp
ATGCCTTCGCTTCAGCTGTTGCAATTAACTGAGCATGGTCGGAGTTTCATTGCATCAAGGAGGAAAACCTTGCTTCTTGCTACTGGTATTGTAGTTGCTGGTGGGGCTGCTGCATATGTTCAATCGAGATTAACCCATAAAAAGCACAATTCTTTTGGTCAATATAATGGGCTGAATGAAAATAAAGTGACAGAGAATGTCGTGGCGAATGATCATAAGAAAAAGAAACTTCCACAAAAGAGAGGGGGATTGAAGTCTCTTCAAGTCCTTGCTGCAATTCTTTTGTCTGAAATGGGCCAAATGGGTGCGAGGGACCTCTTATCTTTGGTCGGAATAGTGGTGTTGCGAACTGCTTTGAGTAACAGACTTGCAAAAGTCCAAGGGTTTTTATTCCGTGCAGCTTTTCTTCGACGTGTTCCATTATTTGTCCGGCTGATTTCTGAGAATATTCTATTATGTTTCCTTGCCTCAACTATGCATTCAACTTCACAGTACATAACAGGGACCTTAAGTCTGCGGTTCAGAAAAATATTGACAAAACGTATCCATTCCCATTATTTTGAGAATATTGCATACTACAAAATGTCACACGTTGATGGTCGGATAACTAATCCGGAACAGCGAATTGCAAGTGATGTACCAAGGTTCTGTTCAGAGTTGAGTGAAATCGTACAAGATGATTTAACAGCTGTTACTGATGGTCTCCTTTACTCTTGGCGGCTGTGTTCCTACACCAGTCCTAAATATATATTCTGGATATTGGCATATGTATTGGGAGCAGGGGGGATGATAAGAAAGTTCTCTCCTCCTTTTGGGAAATTAATGTCCAAAGAACAACAATTGGAAGGGGAGTACCGACAGCTTCATTCACGATTAAGAACCCATGCAGAAAGTGTGGCATTCTATGGTGGAGAAAGTAGAGAGGAATCTCATATTCAGAAGAAGTTTAACACACTGGTTGGGCATCTGCGTGTTGTCCTTCATGATCATTGGTGGTTTGGCATGATTCAAGACTTCCTGTTGAAGTATCTTGGTGCCACAGTTGCTGTTATATTGATTATTGAGCCCTTCTTTTCGGGCAGTCTGAGGCCCGACACTTCAACTTTAGGCCGCGCAGAGATGTTAAGCAACTTAAGATATCATACCAGTGTCATAATTTCACTTTTCCAGTCTATGGGAACTCTCGCTTCAAGTTCGAGAAAACTCAATCGTCTCAGTGGTTACGCTGATCGCATTCATGAATTAATGGTCATATCAAGAGAGCTAAGTGCTGTTGATGACAAATCTTCTGGGAGTAAAAATTGCTCTAGTGAGGCTGATTACATTGAATTTGCTGGGGTCAAGGTTGTTACCCCCACGGGTAATGTTTTGGTGGATAAATTGTCACTTAGGGTTGAACCAGGATCTAATCTTTTGATTACAGGTCCAAATGGCAGTGGAAAGAGCTCGCTTTTCCGAGTTTTAGGAGGCCTGTGGCCCTTGGTATCTGGCCATATTGTGAAACCTGGTGTTGGAACTGATCTCAACAAAGAAATTTTCTATGTTCCACAAAGACCATACACAGCTGTCGGAACACTTCGAGACCAGTTGATTTATCCTCTTACTGCAGATCAAGAGGTCAAACCACTTACACGTGGAGAAATGGCGGAGCTATTGAGAAATGTTGATCTTCAGTATTTATTAGACCGTTATCCACCTGAGGAAGAGATAAATTGGGGTGATGAATTATCTCTTGGTGAGCAACAAAGATTGGGGATGGCTAGACTTTTCTATCATAAGCCCAAATTTGCAATTCTTGATGAGTGCACAAGTGCTGTCACAACTGACATGGAGGAACGATTCTGTGCTAAAGTTCGAGCAATGGGAACATCATGCATTACTATCTCGCATCGCCCAGCACTAGTTGCATTTCATGATATAGTGCTGTCCTTGGATGGTGAAGGCGGTTGGAGTGTTCATGAGAAAAGGGAGGATTCTCTAGTACGTAATGAAGGTGGGAGAAGTATGTTGAAGCTTTCTGAAACGAACCGGCAGAGTGATGCAATGACAGTTCAGCGAGCATTCGCCTCGACCAAAAAGGATTCCGCAATCTCAAACTCAAAGTCCCAGTCATACATTGCTGAGGTGATAGCAGTTTCTCCCTCTGCCAAGCATAATGTTACAGTTCCGTCTTTCCCACATCTCCAAAGTGCTCCCGCAGCACTGCCATTGAGAGCATCTGCCATGGTCAAAGTACTGATTCCCACTGTTATTGATAATCAAGGAGCACAACTGCTTGCAGTTGCTTTTCTCGTAGTATCGAGGACATGGATTTCTGATCGTATTGCTTCATTAAATGGAACCACTGTGAAGTTTGTTTTGGAACAAGATAAGGCATCATTTATTCATCTAATCGGTGTTAGCGTACTTCAGAGTGCGGCATCTTCTTTCATTGCACCTTCTATAAGGCACTTAAAAGCTAGGCTGGCTCTTGGGTGGAGGACTCGTTTGACTCAACATTTACTTAAAAACTACTTGAGAAATAATGCATTCTATAAGGTATTCAACATGTCAAGCAAAAACATAGACGCAGATCAGAGAGTTACACAGGACCTTGAAAAGTTAACCACTGACTTGTCGGGATTGGTTACTGGATTGGTAAAGCCATCTGTGGACATTCTTTGGTTCACCTGGAGAATGAAGCTTTTGACTGGTCGGAGAGGAGTAACCATATTGTACGCGTATATGTTACTGGGTCTTGGTTTGCTCAGGGCTGCTACCCCAGAATTTGGTGATTTGACAAGTCGTCAACAACAACTTGAAGGAACCTTTAGGTTTATGCATGAAAGACTGCGTGCTCATGCTGAATCTGTTGCTTTCTTTGGGGGTGGTTATAGAGAGAAAGCTATGGTTGAATCAAAGTTCAAGGAGCTACTCCATCACTCCTCGTCTCTTTTGAAGAAGCAATGGTTATTCGGTATTCTAGATGATTTTATCACGAAACAACTCCCACATAATGTGACTTGGGGATTGAGCTTGCTATATGCCATTGAACACAAGGGAGACCGAGCATTAATATCTACTCAAGGTGAGCTGGCACATGCATTGCGTTTCTTGGCATCTGTGGTATCTCAAAGCTTTTTAGCTTTCGGTGACATTCTTGAATTGCATAGAAAATTCTTGGAACTCTCTGGCAGCATCAACAGGGTTTTTGAACTTGAAGAGCTTTTAGACGCTGCACAATCTGTGGTTGGCTATTCTAGGGATTCTGAAGCTGGTAACTCATCATCATCTGAGAGGGAAGGTTTTCAATTTGAAGATGCCATTAACTTCTCTGAAGTTGATATCATAACCCCGTCACAGAAATTGTTGGCTAGGAAATTAACATGTGATATAGTACCTGGGAAAAGCTTGCTTGTTACTGGTCCAAATGGGAGTGGAAAAAGTTCTGTGTTTAGAGTTCTTAGAGGTCTTTGGCCCATCATGAGTGGAAGAATCACTAGACCATCTCAAGATGTTAACGGAGTTAGTAGAGATGTTGGATCTGGTTGCGGAGTTTTTTATGTTCCTCAGCGACCATACACATGCTTGGGAACACTCAGGGATCAAATTATATATCCTCTCTCTTTTGATGAGGCGGAGATAAGGGCATTGAAGTTGTATCAAGAAGGTGGAAAATTTGCTGACAACACCAACATTCTGGACATGCGTTTGAGAACTATTCTGGAGAATGTCCGATTAAGTTATCTTTTGGAAAGGGAGGAAGGTGGTTGGGATGCTAATCTCAATTGGGAGGACACTCTCTCTCTCGGGGAACAGCAGAGATTAGGCATGGCACGCCTATTTTTTCACAAACCAAAATTCGCCATCCTTGATGAATGCACCAATGCTACAAGTGTTGATGTTGAAGAACAACTGTATCGGCTTGCAAAAGACATGGGTATCACAGTTGTTACCTCCTCACAACGTCCTGCTCTAATACCATTCCATTCCCTGGAATTACGGCTTATTGATGGTGAGGGTAACTGGGAGCTTCGATCAATAAAGCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001558 GO:0003674 GO:0005092 GO:0005093 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005911 GO:0007154 GO:0007165 GO:0007264 GO:0007265 GO:0007275 GO:0007399 GO:0008150 GO:0008361 GO:0009506 GO:0009987 GO:0010035 GO:0010038 GO:0010720 GO:0010721 GO:0010769 GO:0010770 GO:0010771 GO:0010975 GO:0010976 GO:0010977 GO:0016043 GO:0017016 GO:0017137 GO:0019899 GO:0022008 GO:0022603 GO:0022604 GO:0023052 GO:0030054 GO:0030154 GO:0030234 GO:0030307 GO:0030424 GO:0030516 GO:0030695 GO:0031267 GO:0031344 GO:0031345 GO:0031346 GO:0032386 GO:0032387 GO:0032482 GO:0032501 GO:0032502 GO:0032535 GO:0032879 GO:0032880 GO:0032991 GO:0033157 GO:0035556 GO:0036477 GO:0040008 GO:0042221 GO:0042995 GO:0043005 GO:0043025 GO:0043209 GO:0044297 GO:0044424 GO:0044444 GO:0044464 GO:0045595 GO:0045596 GO:0045597 GO:0045664 GO:0045665 GO:0045666 GO:0045773 GO:0045927 GO:0048046 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048638 GO:0048639 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050767 GO:0050768 GO:0050769 GO:0050770 GO:0050771 GO:0050772 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050896 GO:0051020 GO:0051049 GO:0051051 GO:0051093 GO:0051094 GO:0051128 GO:0051129 GO:0051130 GO:0051223 GO:0051224 GO:0051239 GO:0051240 GO:0051241 GO:0051592 GO:0051716 GO:0051960 GO:0051961 GO:0051962 GO:0055044 GO:0060284 GO:0060341 GO:0060589 GO:0061387 GO:0065007 GO:0065008 GO:0065009 GO:0070201 GO:0071840 GO:0090066 GO:0090087 GO:0090313 GO:0090315 GO:0090317 GO:0097458 GO:0098772 GO:0120025 GO:0120035 GO:1903533 GO:1903827 GO:1903828 GO:1904950 GO:1905475 GO:1905476 GO:2000026
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GDI

Protein Analysis

1343

Amino Acids

150.17

Weight (kDa)

9.26

Isoelectric Point (pI)

44.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane_2 PF06472 90 - 358 3.2e-88 ABC transporter transmembrane region 2
ABC_tran PF00005 459 - 604 1.6e-19 ABC transporter
ABC_membrane_2 PF06472 742 - 1008 1.2e-80 ABC transporter transmembrane region 2
ABC_tran PF00005 1120 - 1289 8e-16 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1034
AccB7I CCANNNNNTGG 3 cut(s) 1174, 2768, 3973
AccII CGCG 2 cut(s) 1113, 2720
AccIII TCCGGA 1 cut(s) 613
AclWI GGATC 3 cut(s) 1411, 3529, 3591
AcoI YGGCCR 1 cut(s) 1489
AcsI RAATTY 7 cut(s) 1328, 1533, 1784, 2765, 3155, 3656, 3839
AcuI CTGAAG 4 cut(s) 1655, 2393, 3270, 3336
AcvI CACGTG 1 cut(s) 1634
AfaI GTAC 9 cut(s) 494, 639, 672, 854, 1983, 2235, 2406, 2717, 3378
AfiI CCNNNNNNNGG 5 cut(s) 812, 1174, 1511, 2768, 3973
AflII CTTAAG 2 cut(s) 508, 1132
AflIII ACRYGT 6 cut(s) 412, 589, 1631, 2547, 2718, 3365
AhdI GACNNNNNGTC 2 cut(s) 510, 2784
AhlI ACTAGT 1 cut(s) 1900
AjiI CACGTC 1 cut(s) 413
AjnI CCWGG 5 cut(s) 1399, 1504, 2669, 3379, 3972
AjuI GAANNNNNNNTTGG 6 cut(s) 634, 666, 1716, 1748, 2342, 2374
Alw21I GWGCWC 5 cut(s) 1448, 1808, 2194, 2269, 2839
Alw26I GTCTC 6 cut(s) 261, 707, 1217, 1575, 2934, 3036
Alw44I GTGCAC 1 cut(s) 1804
AlwI GGATC 3 cut(s) 1411, 3529, 3591
AlwNI CAGNNNCTG 1 cut(s) 1046
Ama87I CYCGRG 1 cut(s) 3788
Aor13HI TCCGGA 1 cut(s) 613
AoxI GGCC 7 cut(s) 295, 1088, 1108, 1468, 1475, 1489, 3455
ApaLI GTGCAC 1 cut(s) 1804
ApeKI GCWGC 8 cut(s) 107, 110, 272, 398, 2198, 2753, 3174, 3215
ApoI RAATTY 7 cut(s) 1328, 1533, 1784, 2765, 3155, 3656, 3839
ArsI GACNNNNNNTTYG 4 cut(s) 2087, 2093, 2119, 2125
AseI ATTAAT 3 cut(s) 821, 1244, 3053
Asp700I GAANNNNTTC 2 cut(s) 3285, 3424
AspLEI GCGC 1 cut(s) 1115
AspS9I GGNCC 9 cut(s) 295, 313, 504, 1089, 1424, 1476, 2590, 3404, 3456
AsuHPI GGTGA 9 cut(s) 1730, 1748, 1949, 2137, 2659, 2783, 3080, 3143, 4007
AvaI CYCGRG 1 cut(s) 3788
AvaII GGWCC 5 cut(s) 313, 504, 1424, 2590, 3404
AxyI CCTNAGG 1 cut(s) 1698
BaeGI GKGCMC 1 cut(s) 1808
BaeI ACNNNNGTAYC 4 cut(s) 3881, 3904, 3914, 3937
BalI TGGCCA 1 cut(s) 1491
BanI GGYRCC 1 cut(s) 1034
BanII GRGCYC 2 cut(s) 1068, 1448
BbrPI CACGTG 1 cut(s) 1634
Bbv12I GWGCWC 5 cut(s) 1448, 1808, 2194, 2269, 2839
BbvCI CCTCAGC 2 cut(s) 2121, 3549
BbvI GCAGC 8 cut(s) 94, 97, 259, 410, 2210, 2740, 3186, 3202
BceAI ACGGC 1 cut(s) 3998
BcgI CGANNNNNNTGC 2 cut(s) 2049, 2083
BciT130I CCWGG 5 cut(s) 1401, 1506, 2671, 3381, 3974
BciVI GTATCC 1 cut(s) 554
BclI TGATCA 2 cut(s) 211, 985
BcoDI GTCTC 6 cut(s) 261, 707, 1217, 1575, 2934, 3036
BcuI ACTAGT 1 cut(s) 1900
BfaI CTAG 9 cut(s) 1308, 1761, 1901, 1979, 2460, 2963, 3240, 3354, 3480
BfmI CTRYAG 1 cut(s) 1605
BfrI CTTAAG 2 cut(s) 508, 1132
BfuI GTATCC 1 cut(s) 554
BmcAI AGTACT 1 cut(s) 2235
Bme1390I CCNGG 5 cut(s) 1401, 1506, 2671, 3381, 3974
Bme18I GGWCC 5 cut(s) 313, 504, 1424, 2590, 3404
BmeRI GACNNNNNGTC 2 cut(s) 510, 2784
BmeT110I CYCGRG 1 cut(s) 3788
BmgBI CACGTC 1 cut(s) 413
BmgT120I GGNCC 9 cut(s) 295, 313, 504, 1089, 1424, 1476, 2590, 3404, 3456
BmiI GGNNCC 5 cut(s) 314, 505, 1036, 2341, 2806
BmrFI CCNGG 5 cut(s) 1401, 1506, 2671, 3381, 3974
BmrI ACTGGG 3 cut(s) 2101, 2741, 4015
BmuI ACTGGG 3 cut(s) 2101, 2741, 4015
BpmI CTGGAG 2 cut(s) 2692, 3725
Bpu10I CCTNAGC 3 cut(s) 2121, 2747, 3549
BpuEI CTTGAG 3 cut(s) 2536, 3048, 3474
BsaAI YACGTR 2 cut(s) 1634, 1985
BsaBI GATNNNNATC 1 cut(s) 3759
BsaI GGTCTC 3 cut(s) 707, 1575, 3036
BsaJI CCNNGG 8 cut(s) 379, 641, 1356, 1479, 1929, 2223, 3380, 3972
BsaWI WCCGGW 1 cut(s) 613
BsaXI ACNNNNNCTCC 2 cut(s) 2470, 2500
Bsc4I CCNNNNNNNGG 5 cut(s) 812, 1174, 1511, 2768, 3973
Bse118I RCCGGY 1 cut(s) 2028
Bse21I CCTNAGG 1 cut(s) 1698
Bse3DI GCAATG 7 cut(s) 48, 1866, 2049, 2115, 2430, 2951, 3083
Bse8I GATNNNNATC 1 cut(s) 3759
BseAI TCCGGA 1 cut(s) 613
BseBI CCWGG 5 cut(s) 1401, 1506, 2671, 3381, 3974
BseDI CCNNGG 8 cut(s) 379, 641, 1356, 1479, 1929, 2223, 3380, 3972
BseGI GGATG 5 cut(s) 792, 1761, 1939, 3760, 3846
BseJI GATNNNNATC 1 cut(s) 3759
BseLI CCNNNNNNNGG 5 cut(s) 812, 1174, 1511, 2768, 3973
BseMI GCAATG 7 cut(s) 48, 1866, 2049, 2115, 2430, 2951, 3083
BseRI GAGGAG 4 cut(s) 795, 2715, 2914, 3928
BseSI GKGCMC 1 cut(s) 1808
BseXI GCAGC 8 cut(s) 94, 97, 259, 410, 2210, 2740, 3186, 3202
BseYI CCCAGC 2 cut(s) 1334, 1894
BsgI GTGCAG 2 cut(s) 417, 3201
Bsh1236I CGCG 2 cut(s) 1113, 2720
BshFI GGCC 7 cut(s) 297, 1090, 1110, 1470, 1477, 1491, 3457
BshNI GGYRCC 1 cut(s) 1034
BsiHKAI GWGCWC 5 cut(s) 1448, 1808, 2194, 2269, 2839
BsiHKCI CYCGRG 1 cut(s) 3788
BsiSI CCGG 3 cut(s) 430, 614, 2029
BslFI GGGAC 3 cut(s) 326, 517, 2089
BslI CCNNNNNNNGG 5 cut(s) 812, 1174, 1511, 2768, 3973
BsmAI GTCTC 6 cut(s) 261, 707, 1217, 1575, 2934, 3036
BsmBI CGTCTC 2 cut(s) 1217, 2934
BsmFI GGGAC 3 cut(s) 326, 517, 2089
BsmI GAATGC 6 cut(s) 478, 899, 1233, 2060, 2528, 3863
BsnI GGCC 7 cut(s) 297, 1090, 1110, 1470, 1477, 1491, 3457
Bso31I GGTCTC 3 cut(s) 707, 1575, 3036
BsoBI CYCGRG 1 cut(s) 3788
Bsp1286I GDGCHC 6 cut(s) 1068, 1448, 1808, 2194, 2269, 2839
Bsp13I TCCGGA 1 cut(s) 613
Bsp19I CCATGG 1 cut(s) 2223
BspANI GGCC 7 cut(s) 297, 1090, 1110, 1470, 1477, 1491, 3457
BspEI TCCGGA 1 cut(s) 613
BspFNI CGCG 2 cut(s) 1113, 2720
BspHI TCATGA 5 cut(s) 982, 1237, 1912, 1957, 3462
BspLI GGNNCC 5 cut(s) 314, 505, 1036, 2341, 2806
BspMAI CTGCAG 1 cut(s) 1609
BspPI GGATC 3 cut(s) 1411, 3529, 3591
BspQI GCTCTTC 1 cut(s) 3195
BspT107I GGYRCC 1 cut(s) 1034
BspTI CTTAAG 2 cut(s) 508, 1132
BspTNI GGTCTC 3 cut(s) 707, 1575, 3036
BsrDI GCAATG 7 cut(s) 48, 1866, 2049, 2115, 2430, 2951, 3083
BsrFI RCCGGY 1 cut(s) 2028
BssAI RCCGGY 1 cut(s) 2028
BssECI CCNNGG 8 cut(s) 379, 641, 1356, 1479, 1929, 2223, 3380, 3972
BssT1I CCWWGG 5 cut(s) 379, 641, 1479, 1929, 2223
Bst2UI CCWGG 5 cut(s) 1401, 1506, 2671, 3381, 3974
Bst4CI ACNGT 9 cut(s) 492, 1042, 1688, 2050, 2164, 2248, 2347, 3897, 3928
Bst6I CTCTTC 3 cut(s) 264, 1698, 3195
BstAFI CTTAAG 2 cut(s) 508, 1132
BstAPI GCANNNNNTGC 1 cut(s) 1904
BstBAI YACGTR 2 cut(s) 1634, 1985
BstDSI CCRYGG 2 cut(s) 1356, 2223
BstF5I GGATG 5 cut(s) 792, 1761, 1939, 3760, 3846
BstFNI CGCG 2 cut(s) 1113, 2720
BstHHI GCGC 1 cut(s) 1115
BstMAI GTCTC 6 cut(s) 261, 707, 1217, 1575, 2934, 3036
BstMWI GCNNNNNNNGC 6 cut(s) 104, 1043, 1904, 2198, 2465, 3816
BstNI CCWGG 5 cut(s) 1401, 1506, 2671, 3381, 3974
BstNSI RCATGY 5 cut(s) 2551, 3083, 3369, 3567, 3688
BstSCI CCNGG 5 cut(s) 1399, 1504, 2669, 3379, 3972
BstSFI CTRYAG 1 cut(s) 1605
BstSLI GKGCMC 1 cut(s) 1808
BstSNI TACGTA 1 cut(s) 1985
BstUI CGCG 2 cut(s) 1113, 2720
BstV1I GCAGC 8 cut(s) 94, 97, 259, 410, 2210, 2740, 3186, 3202
BstX2I RGATCY 2 cut(s) 1403, 3521
BstXI CCANNNNNNTGG 1 cut(s) 3679
BstYI RGATCY 2 cut(s) 1403, 3521
Bsu36I CCTNAGG 1 cut(s) 1698
BsuI GTATCC 1 cut(s) 554
BsuRI GGCC 7 cut(s) 297, 1090, 1110, 1470, 1477, 1491, 3457
BtgI CCRYGG 2 cut(s) 1356, 2223
BtgZI GCGATG 1 cut(s) 1874
BtrI CACGTC 1 cut(s) 413
BtsCI GGATG 5 cut(s) 792, 1761, 1939, 3760, 3846
BtsI GCAGTG 2 cut(s) 1441, 2201
BtsIMutI CAGTG 8 cut(s) 953, 1153, 1222, 1441, 2201, 2244, 2343, 2607
CaiI CAGNNNCTG 1 cut(s) 1046
CciI TCATGA 5 cut(s) 982, 1237, 1912, 1957, 3462
CfoI GCGC 1 cut(s) 1115
Cfr10I RCCGGY 1 cut(s) 2028
Cfr13I GGNCC 9 cut(s) 295, 313, 504, 1089, 1424, 1476, 2590, 3404, 3456
CseI GACGC 2 cut(s) 2576, 3221
CsiI ACCWGGT 1 cut(s) 1504
Csp6I GTAC 9 cut(s) 493, 638, 671, 853, 1982, 2234, 2405, 2716, 3377
CspCI CAANNNNNGTGG 2 cut(s) 2233, 2268
CviQI GTAC 9 cut(s) 493, 638, 671, 853, 1982, 2234, 2405, 2716, 3377
DriI GACNNNNNGTC 2 cut(s) 510, 2784
EaeI YGGCCR 1 cut(s) 1489
Eam1104I CTCTTC 3 cut(s) 264, 1698, 3195
Eam1105I GACNNNNNGTC 2 cut(s) 510, 2784
EarI CTCTTC 3 cut(s) 264, 1698, 3195
EciI GGCGGA 2 cut(s) 1661, 3632
Ecl136II GAGCTC 1 cut(s) 1446
Eco105I TACGTA 1 cut(s) 1985
Eco130I CCWWGG 5 cut(s) 379, 641, 1479, 1929, 2223
Eco147I AGGCCT 1 cut(s) 1470
Eco24I GRGCYC 2 cut(s) 1068, 1448
Eco31I GGTCTC 3 cut(s) 707, 1575, 3036
Eco32I GATATC 2 cut(s) 1139, 3325
Eco47I GGWCC 5 cut(s) 313, 504, 1424, 2590, 3404
Eco53kI GAGCTC 1 cut(s) 1446
Eco57I CTGAAG 4 cut(s) 1655, 2393, 3270, 3336
Eco72I CACGTG 1 cut(s) 1634
Eco81I CCTNAGG 1 cut(s) 1698
Eco88I CYCGRG 1 cut(s) 3788
EcoICRI GAGCTC 1 cut(s) 1446
EcoO109I RGGNCCY 3 cut(s) 313, 504, 2590
EcoRII CCWGG 5 cut(s) 1399, 1504, 2669, 3379, 3972
EcoRV GATATC 2 cut(s) 1139, 3325
EcoT14I CCWWGG 5 cut(s) 379, 641, 1479, 1929, 2223
EcoT22I ATGCAT 5 cut(s) 480, 1877, 2530, 2823, 3085
EcoT38I GRGCYC 2 cut(s) 1068, 1448
ErhI CCWWGG 5 cut(s) 379, 641, 1479, 1929, 2223
Esp3I CGTCTC 2 cut(s) 1217, 2934
FaqI GGGAC 3 cut(s) 326, 517, 2089
FauI CCCGC 1 cut(s) 2203
FauNDI CATATG 2 cut(s) 115, 766
FbaI TGATCA 2 cut(s) 211, 985
FokI GGATG 5 cut(s) 799, 1768, 1946, 3767, 3833
FriOI GRGCYC 2 cut(s) 1068, 1448
FspBI CTAG 9 cut(s) 1308, 1761, 1901, 1979, 2460, 2963, 3240, 3354, 3480
GlaI GCGC 1 cut(s) 1114
GsaI CCCAGC 2 cut(s) 1338, 1898
GsuI CTGGAG 2 cut(s) 2692, 3725
HaeIII GGCC 7 cut(s) 297, 1090, 1110, 1470, 1477, 1491, 3457
HapII CCGG 3 cut(s) 430, 614, 2029
HgaI GACGC 2 cut(s) 2576, 3221
HhaI GCGC 1 cut(s) 1115
Hin6I GCGC 1 cut(s) 1113
HinP1I GCGC 1 cut(s) 1113
HincII GTYRAC 3 cut(s) 2604, 2789, 3499
HindII GTYRAC 3 cut(s) 2604, 2789, 3499
HindIII AAGCTT 4 cut(s) 2012, 2681, 3115, 3388
HpaI GTTAAC 2 cut(s) 2604, 3499
HpaII CCGG 3 cut(s) 430, 614, 2029
HphI GGTGA 9 cut(s) 1730, 1748, 1949, 2137, 2659, 2783, 3080, 3143, 4007
Hpy166II GTNNAC 6 cut(s) 1806, 2604, 2653, 2667, 2789, 3499
Hpy8I GTNNAC 6 cut(s) 1806, 2604, 2653, 2667, 2789, 3499
Hpy99I CGWCG 1 cut(s) 414
HpyCH4III ACNGT 9 cut(s) 492, 1042, 1688, 2050, 2164, 2248, 2347, 3897, 3928
HpyCH4IV ACGT 6 cut(s) 412, 541, 591, 1633, 1984, 3946
HpyF10VI GCNNNNNNNGC 6 cut(s) 104, 1043, 1904, 2198, 2465, 3816
HpySE526I ACGT 6 cut(s) 412, 541, 591, 1633, 1984, 3946
HspAI GCGC 1 cut(s) 1113
Kpn2I TCCGGA 1 cut(s) 613
Ksp22I TGATCA 2 cut(s) 211, 985
KspAI GTTAAC 2 cut(s) 2604, 3499
LguI GCTCTTC 1 cut(s) 3195
LmnI GCTCC 6 cut(s) 776, 1648, 2197, 2264, 2908, 4009
Lsp1109I GCAGC 8 cut(s) 94, 97, 259, 410, 2210, 2740, 3186, 3202
MabI ACCWGGT 1 cut(s) 1504
MaeI CTAG 9 cut(s) 1308, 1761, 1901, 1979, 2460, 2963, 3240, 3354, 3480
MaeII ACGT 6 cut(s) 412, 541, 591, 1633, 1984, 3946
MfeI CAATTG 2 cut(s) 839, 3766
MflI RGATCY 2 cut(s) 1403, 3521
MhlI GDGCHC 6 cut(s) 1068, 1448, 1808, 2194, 2269, 2839
MlsI TGGCCA 1 cut(s) 1491
MluI ACGCGT 1 cut(s) 2718
MluNI TGGCCA 1 cut(s) 1491
MlyI GAGTC 2 cut(s) 2476, 2485
MmeI TCCRAC 8 cut(s) 20, 310, 581, 1492, 1549, 1928, 2675, 3499
Mox20I TGGCCA 1 cut(s) 1491
Mph1103I ATGCAT 5 cut(s) 480, 1877, 2530, 2823, 3085
MroI TCCGGA 1 cut(s) 613
MroXI GAANNNNTTC 2 cut(s) 3285, 3424
MscI TGGCCA 1 cut(s) 1491
MslI CAYNNNNRTG 4 cut(s) 594, 969, 1146, 3562
Msp20I TGGCCA 1 cut(s) 1491
MspA1I CMGCKG 3 cut(s) 16, 689, 1565
MspCI CTTAAG 2 cut(s) 508, 1132
MspI CCGG 3 cut(s) 430, 614, 2029
MspR9I CCNGG 5 cut(s) 1401, 1506, 2671, 3381, 3974
MunI CAATTG 2 cut(s) 839, 3766
Mva1269I GAATGC 6 cut(s) 478, 899, 1233, 2060, 2528, 3863
MvaI CCWGG 5 cut(s) 1401, 1506, 2671, 3381, 3974
MvnI CGCG 2 cut(s) 1113, 2720
MwoI GCNNNNNNNGC 6 cut(s) 104, 1043, 1904, 2198, 2465, 3816
NcoI CCATGG 1 cut(s) 2223
NdeI CATATG 2 cut(s) 115, 766
NlaIV GGNNCC 5 cut(s) 314, 505, 1036, 2341, 2806
NmuCI GTSAC 7 cut(s) 187, 585, 1383, 1816, 2998, 3131, 3336
NsiI ATGCAT 5 cut(s) 480, 1877, 2530, 2823, 3085
NspI RCATGY 5 cut(s) 2551, 3083, 3369, 3567, 3688
PagI TCATGA 5 cut(s) 982, 1237, 1912, 1957, 3462
PceI AGGCCT 1 cut(s) 1470
PciI ACATGT 2 cut(s) 2547, 3365
PciSI GCTCTTC 1 cut(s) 3195
PcsI WCGNNNNNNNCGW 1 cut(s) 2400
PctI GAATGC 6 cut(s) 478, 899, 1233, 2060, 2528, 3863
PdmI GAANNNNTTC 2 cut(s) 3285, 3424
PflMI CCANNNNNTGG 3 cut(s) 1174, 2768, 3973
PleI GAGTC 2 cut(s) 2476, 2485
PmaCI CACGTG 1 cut(s) 1634
PmlI CACGTG 1 cut(s) 1634
PpsI GAGTC 2 cut(s) 2476, 2485
Ppu21I YACGTR 2 cut(s) 1634, 1985
PpuMI RGGWCCY 3 cut(s) 313, 504, 2590
PscI ACATGT 2 cut(s) 2547, 3365
PshBI ATTAAT 3 cut(s) 821, 1244, 3053
Psp124BI GAGCTC 1 cut(s) 1448
Psp5II RGGWCCY 3 cut(s) 313, 504, 2590
Psp6I CCWGG 5 cut(s) 1399, 1504, 2669, 3379, 3972
PspCI CACGTG 1 cut(s) 1634
PspFI CCCAGC 2 cut(s) 1334, 1894
PspGI CCWGG 5 cut(s) 1399, 1504, 2669, 3379, 3972
PspN4I GGNNCC 5 cut(s) 314, 505, 1036, 2341, 2806
PspPI GGNCC 9 cut(s) 295, 313, 504, 1089, 1424, 1476, 2590, 3404, 3456
PspPPI RGGWCCY 3 cut(s) 313, 504, 2590
PstI CTGCAG 1 cut(s) 1609
PstNI CAGNNNCTG 1 cut(s) 1046
PsuI RGATCY 2 cut(s) 1403, 3521
PvuII CAGCTG 3 cut(s) 16, 689, 1565
RsaI GTAC 9 cut(s) 494, 639, 672, 854, 1983, 2235, 2406, 2717, 3378
RsaNI GTAC 9 cut(s) 493, 638, 671, 853, 1982, 2234, 2405, 2716, 3377
RseI CAYNNNNRTG 4 cut(s) 594, 969, 1146, 3562
SacI GAGCTC 1 cut(s) 1448
SapI GCTCTTC 1 cut(s) 3195
Sau96I GGNCC 9 cut(s) 295, 313, 504, 1089, 1424, 1476, 2590, 3404, 3456
ScaI AGTACT 1 cut(s) 2235
SchI GAGTC 2 cut(s) 2476, 2485
ScrFI CCNGG 5 cut(s) 1401, 1506, 2671, 3381, 3974
SduI GDGCHC 6 cut(s) 1068, 1448, 1808, 2194, 2269, 2839
SexAI ACCWGGT 1 cut(s) 1504
SfcI CTRYAG 1 cut(s) 1605
SinI GGWCC 5 cut(s) 313, 504, 1424, 2590, 3404
SmiMI CAYNNNNRTG 4 cut(s) 594, 969, 1146, 3562
SmlI CTYRAG 5 cut(s) 508, 1132, 2515, 3063, 3489
SmoI CTYRAG 5 cut(s) 508, 1132, 2515, 3063, 3489
SnaBI TACGTA 1 cut(s) 1985
SpeI ACTAGT 1 cut(s) 1900
SseBI AGGCCT 1 cut(s) 1470
SspI AATATT 3 cut(s) 448, 531, 568
SspMI CTAG 9 cut(s) 1308, 1761, 1901, 1979, 2460, 2963, 3240, 3354, 3480
SstI GAGCTC 1 cut(s) 1448
StuI AGGCCT 1 cut(s) 1470
StyD4I CCNGG 5 cut(s) 1399, 1504, 2669, 3379, 3972
StyI CCWWGG 5 cut(s) 379, 641, 1479, 1929, 2223
TaaI ACNGT 9 cut(s) 492, 1042, 1688, 2050, 2164, 2248, 2347, 3897, 3928
TaiI ACGT 6 cut(s) 415, 544, 594, 1636, 1987, 3949
TaqI TCGA 8 cut(s) 125, 409, 1196, 1579, 1855, 2069, 2300, 4015
TaqII GACCGA 1 cut(s) 3060
TatI WGTACW 2 cut(s) 492, 2233
TauI GCSGC 3 cut(s) 721, 1113, 2420
TscAI CASTG 8 cut(s) 960, 1153, 1222, 1441, 2208, 2251, 2350, 2614
TseFI GTSAC 7 cut(s) 187, 585, 1383, 1816, 2998, 3131, 3336
TseI GCWGC 8 cut(s) 107, 110, 272, 398, 2198, 2753, 3174, 3215
Tsp45I GTSAC 7 cut(s) 187, 585, 1383, 1816, 2998, 3131, 3336
TspGWI ACGGA 3 cut(s) 383, 2157, 3516
TspRI CASTG 8 cut(s) 960, 1153, 1222, 1441, 2208, 2251, 2350, 2614
Van91I CCANNNNNTGG 3 cut(s) 1174, 2768, 3973
Vha464I CTTAAG 2 cut(s) 508, 1132
VneI GTGCAC 1 cut(s) 1804
VpaK11BI GGWCC 5 cut(s) 313, 504, 1424, 2590, 3404
VspI ATTAAT 3 cut(s) 821, 1244, 3053
XapI RAATTY 7 cut(s) 1328, 1533, 1784, 2765, 3155, 3656, 3839
XbaI TCTAGA 1 cut(s) 2962
XceI RCATGY 5 cut(s) 2551, 3083, 3369, 3567, 3688
XmnI GAANNNNTTC 2 cut(s) 3285, 3424
XspI CTAG 9 cut(s) 1308, 1761, 1901, 1979, 2460, 2963, 3240, 3354, 3480
ZrmI AGTACT 1 cut(s) 2235
Zsp2I ATGCAT 5 cut(s) 480, 1877, 2530, 2823, 3085
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.