Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003129.1

Orthogroup ID

OG0002570

Physical Location & Seq

Genomic Coordinates Forward (+)

44874 .. 50337

Gene Structure 5464 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003129.1_g000011.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1467 bp

atgggtgtggagcagggtgtgtggggtgacaacgattgtctaacagggcaatgctggtatggaggtggtgcaactggatcaatgaggctacgatggtgcttttggtgcaggatcaacgaaaccaggggagcaatggatgaagagtatgacgtcatagtgttgggaactggtctgaaggaatgcatcctcagcggtcttctctcggttgacggcctcaaggttctacacatggataggaatgactattacggaggagagtgtgcatcgcttaatcttgttcagctctggaagaggttcaggggagatgataagcccccagcacagttgggctctagtagggattataatgtggacatggtccctaagtttatgatggccaatggaactctagtgcgtgtcctcattcatacagatgttaccaagtatttgtccttcaaagctgtggatggcagttttgtctataataaaggaaaggttcacaaggttccagcaaatgatatggaggcacttaaatctccactcatgggtctattcgaaaagcgccgtgcccgcaagttcttcatatatgttcaagattataatgaaagcgatcccaaaacacacgagggaatggacttaacaagagtgacaactagagaattgattgcaaaatatggtcttgatgacaacactattgacttcattgggcatgctttagcccttcatagagatgatcgctacctggatgaacctgcactggatactgtgaaaaggatgaagctttatgcggaatctattgcacgttttcaaggaggatctccatacatttatcctttgtatggactaggagagcttcctcaggcatttgcacgtcttagtgcggtttatggtggtacttatatgcttaataaacctgaatgcaaggtggagttcaatgaggaagggaaagttattggtgtcacatctgaaggtgaaactgccaagtgcacaaaagttgtctgtgacccttcttacttacccaacaaggtcaggaaggttggtaaggttgcaagggctatagccataatgagccccccaattccaaacacaaatgattctcattcagtgcaggttatcctgccacaaaagcagctgggtcgcagatccgatatgtatctcttctgttcctcttactctcacaatgttgctccgaagggaaagtttattgcgtttgtgtcaacagaagcggaaactgataatccacatactgagctaaagccaggaattgaccttttagggcctgttgaagagatattttttgatatttatgacagatatgagccggtcaatgaaccctctttggacaattgctttatatcaactagttatgatgccacaacacactttgagtccactgtcatggatgtactcaacatgtataccttgataacagggaaggttcttgatcttagcgtggacctaagtgctgctagtgctgccgaagaatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001558 GO:0003674 GO:0005092 GO:0005093 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005911 GO:0007154 GO:0007165 GO:0007264 GO:0007265 GO:0007275 GO:0007399 GO:0008150 GO:0008361 GO:0009506 GO:0009987 GO:0010035 GO:0010038 GO:0010720 GO:0010721 GO:0010769 GO:0010770 GO:0010771 GO:0010975 GO:0010976 GO:0010977 GO:0016043 GO:0017016 GO:0017137 GO:0019899 GO:0022008 GO:0022603 GO:0022604 GO:0023052 GO:0030054 GO:0030154 GO:0030234 GO:0030307 GO:0030424 GO:0030516 GO:0030695 GO:0031267 GO:0031344 GO:0031345 GO:0031346 GO:0032386 GO:0032387 GO:0032482 GO:0032501 GO:0032502 GO:0032535 GO:0032879 GO:0032880 GO:0032991 GO:0033157 GO:0035556 GO:0036477 GO:0040008 GO:0042221 GO:0042995 GO:0043005 GO:0043025 GO:0043209 GO:0044297 GO:0044424 GO:0044444 GO:0044464 GO:0045595 GO:0045596 GO:0045597 GO:0045664 GO:0045665 GO:0045666 GO:0045773 GO:0045927 GO:0048046 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048638 GO:0048639 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050767 GO:0050768 GO:0050769 GO:0050770 GO:0050771 GO:0050772 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050896 GO:0051020 GO:0051049 GO:0051051 GO:0051093 GO:0051094 GO:0051128 GO:0051129 GO:0051130 GO:0051223 GO:0051224 GO:0051239 GO:0051240 GO:0051241 GO:0051592 GO:0051716 GO:0051960 GO:0051961 GO:0051962 GO:0055044 GO:0060284 GO:0060341 GO:0060589 GO:0061387 GO:0065007 GO:0065008 GO:0065009 GO:0070201 GO:0071840 GO:0090066 GO:0090087 GO:0090313 GO:0090315 GO:0090317 GO:0097458 GO:0098772 GO:0120025 GO:0120035 GO:1903533 GO:1903827 GO:1903828 GO:1904950 GO:1905475 GO:1905476 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GDI

Protein Analysis

488

Amino Acids

54.61

Weight (kDa)

5.45

Isoelectric Point (pI)

37.25

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002570)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44100 AT2G44100 AT3G59920
fragaria_vesca	FvH4_1g00070
malus_domestica	MD02G1000900.v1.1 MD15G1141900.v1.1
prunus_persica	Prupe.7G271300_v2.0.a1 Prupe.7G271300_v2.0.a1
pyrus_communis	pycom15g12810 pycom290g00070
rosa_chinensis	RchiOBHm_Chr2g0084291 RchiOBHm_Chr7g0209621 RchiOBHm_Chr7g0234411
rosa_laevigata	RLG00000015607
rosa_multiflora	Rmu_sc0003129.1_g000011 Rmu_sc0004787.1_g000004
rosa_roxburghii	Rroxscaffold_2G00156180 Rroxscaffold_6G00407240
rosa_rugosa	Rorug01G0452500 Rorug01G0452600 Rorug03G0278400 Rorug03G0278500 Rorug03G0278600 Rorug07G0114700
rosa_samantha	Rh2AG000900 Rh2BG000800 Rh2BG264200 Rh2CG000700 Rh2DG000900 Rh6AG218100 Rh7AG248600 Rh7AG381600 Rh7CG264600 Rh7CG401100 Rh7CG461200 Rh7DG254600
rosa_wichuraiana	Rw2G000070 Rw2G022390 Rw2G045720 Rw5G030850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	345, 579
AatII	GACGTC	1 cut(s)	153
Acc36I	ACCTGC	2 cut(s)	739, 1078
AccI	GTMKAC	1 cut(s)	1397
AciI	CCGC	5 cut(s)	192, 550, 767, 860, 1205
AclWI	GGATC	5 cut(s)	85, 119, 584, 802, 1116
AcoI	YGGCCR	1 cut(s)	375
AcuI	CTGAAG	2 cut(s)	194, 966
AcyI	GRCGYC	1 cut(s)	150
AfaI	GTAC	2 cut(s)	874, 1386
AfiI	CCNNNNNNNGG	2 cut(s)	524, 818
AflIII	ACRYGT	1 cut(s)	1392
AgsI	TTSAA	5 cut(s)	436, 572, 788, 913, 1265
AhlI	ACTAGT	1 cut(s)	1340
AjiI	CACGTC	1 cut(s)	851
AjnI	CCWGG	3 cut(s)	122, 720, 1237
AluBI	AGCT	6 cut(s)	283, 440, 760, 832, 1111, 1231
AluI	AGCT	6 cut(s)	283, 440, 760, 832, 1111, 1231
Alw21I	GWGCWC	1 cut(s)	968
Alw44I	GTGCAC	1 cut(s)	964
AlwI	GGATC	5 cut(s)	85, 119, 584, 802, 1116
AoxI	GGCC	3 cut(s)	211, 375, 1256
ApaLI	GTGCAC	1 cut(s)	964
ApeKI	GCWGC	3 cut(s)	1108, 1445, 1454
Asp700I	GAANNNNTTC	1 cut(s)	293
AspLEI	GCGC	1 cut(s)	543
AspS9I	GGNCC	3 cut(s)	358, 1256, 1435
AsuHPI	GGTGA	2 cut(s)	38, 962
AsuII	TTCGAA	1 cut(s)	534
AvaII	GGWCC	2 cut(s)	358, 1435
AxyI	CCTNAGG	1 cut(s)	837
BaeGI	GKGCMC	2 cut(s)	550, 968
BalI	TGGCCA	1 cut(s)	377
BanII	GRGCYC	2 cut(s)	332, 1052
BarI	GAAGNNNNNNTAC	2 cut(s)	416, 448
BauI	CACGAG	1 cut(s)	602
BbsI	GAAGAC	1 cut(s)	188
Bbv12I	GWGCWC	1 cut(s)	968
BbvCI	CCTCAGC	1 cut(s)	188
BbvI	GCAGC	3 cut(s)	1120, 1432, 1441
BccI	CCATC	3 cut(s)	87, 367, 440
BceAI	ACGGC	2 cut(s)	226, 528
BcgI	CGANNNNNNTGC	2 cut(s)	1097, 1131
BciT130I	CCWGG	3 cut(s)	124, 722, 1239
BciVI	GTATCC	1 cut(s)	733
BcuI	ACTAGT	1 cut(s)	1340
BfaI	CTAG	6 cut(s)	333, 389, 633, 824, 1341, 1449
BfmI	CTRYAG	1 cut(s)	1035
BfoI	RGCGCY	1 cut(s)	544
BfuAI	ACCTGC	2 cut(s)	739, 1078
BfuI	GTATCC	1 cut(s)	733
BisI	GCNGC	3 cut(s)	1109, 1446, 1455
BlsI	GCNGC	3 cut(s)	1110, 1447, 1456
Bme1390I	CCNGG	3 cut(s)	124, 722, 1239
Bme18I	GGWCC	2 cut(s)	358, 1435
BmgBI	CACGTC	1 cut(s)	851
BmgT120I	GGNCC	3 cut(s)	358, 1256, 1435
BmiI	GGNNCC	2 cut(s)	360, 486
BmrFI	CCNGG	3 cut(s)	124, 722, 1239
BmsI	GCATC	3 cut(s)	192, 272, 1339
BpiI	GAAGAC	1 cut(s)	188
Bpu10I	CCTNAGC	1 cut(s)	188
Bpu14I	TTCGAA	1 cut(s)	534
BpuEI	CTTGAG	1 cut(s)	200
BsaBI	GATNNNNATC	1 cut(s)	1131
BsaHI	GRCGYC	1 cut(s)	150
BsaJI	CCNNGG	1 cut(s)	123
Bsc4I	CCNNNNNNNGG	2 cut(s)	524, 818
Bse118I	RCCGGY	1 cut(s)	1300
Bse1I	ACTGG	3 cut(s)	79, 172, 741
Bse21I	CCTNAGG	1 cut(s)	837
Bse3DI	GCAATG	2 cut(s)	56, 138
Bse8I	GATNNNNATC	1 cut(s)	1131
BseBI	CCWGG	3 cut(s)	124, 722, 1239
BseDI	CCNNGG	1 cut(s)	123
BseGI	GGATG	6 cut(s)	142, 183, 451, 730, 759, 1387
BseJI	GATNNNNATC	1 cut(s)	1131
BseLI	CCNNNNNNNGG	2 cut(s)	524, 818
BseMI	GCAATG	2 cut(s)	56, 138
BseMII	CTCAG	3 cut(s)	202, 851, 1218
BseNI	ACTGG	3 cut(s)	79, 172, 741
BseRI	GAGGAG	1 cut(s)	267
BseSI	GKGCMC	2 cut(s)	550, 968
BseXI	GCAGC	3 cut(s)	1120, 1432, 1441
BseYI	CCCAGC	2 cut(s)	316, 1111
BsgI	GTGCAG	3 cut(s)	127, 717, 1106
BshFI	GGCC	3 cut(s)	213, 377, 1258
BsiHKAI	GWGCWC	1 cut(s)	968
BsiSI	CCGG	1 cut(s)	1301
BslFI	GGGAC	1 cut(s)	344
BslI	CCNNNNNNNGG	2 cut(s)	524, 818
BsmFI	GGGAC	1 cut(s)	344
BsmI	GAATGC	2 cut(s)	185, 902
BsnI	GGCC	3 cut(s)	213, 377, 1258
Bsp119I	TTCGAA	1 cut(s)	534
Bsp1286I	GDGCHC	4 cut(s)	332, 550, 968, 1052
Bsp143I	GATC	7 cut(s)	77, 111, 589, 712, 794, 1121, 1423
BspACI	CCGC	5 cut(s)	192, 550, 767, 860, 1205
BspANI	GGCC	3 cut(s)	213, 377, 1258
BspCNI	CTCAG	3 cut(s)	201, 850, 1219
BspLI	GGNNCC	2 cut(s)	360, 486
BspMI	ACCTGC	2 cut(s)	739, 1078
BspPI	GGATC	5 cut(s)	85, 119, 584, 802, 1116
BspT104I	TTCGAA	1 cut(s)	534
BsrDI	GCAATG	2 cut(s)	56, 138
BsrFI	RCCGGY	1 cut(s)	1300
BsrI	ACTGG	3 cut(s)	79, 172, 741
BssAI	RCCGGY	1 cut(s)	1300
BssECI	CCNNGG	1 cut(s)	123
BssMI	GATC	7 cut(s)	77, 111, 589, 712, 794, 1121, 1423
BssNAI	GTATAC	1 cut(s)	1398
BssNI	GRCGYC	1 cut(s)	150
BssSI	CACGAG	1 cut(s)	602
Bst1107I	GTATAC	1 cut(s)	1398
Bst2BI	CACGAG	1 cut(s)	602
Bst2UI	CCWGG	3 cut(s)	124, 722, 1239
Bst4CI	ACNGT	3 cut(s)	324, 745, 1375
Bst6I	CTCTTC	4 cut(s)	135, 284, 1142, 1260
BstACI	GRCGYC	1 cut(s)	150
BstBI	TTCGAA	1 cut(s)	534
BstC8I	GCNNGC	2 cut(s)	550, 690
BstDEI	CTNAG	7 cut(s)	188, 363, 837, 854, 1227, 1427, 1439
BstF5I	GGATG	6 cut(s)	142, 183, 451, 730, 759, 1387
BstH2I	RGCGCY	1 cut(s)	544
BstHHI	GCGC	1 cut(s)	543
BstKTI	GATC	7 cut(s)	80, 114, 592, 715, 797, 1124, 1426
BstMBI	GATC	7 cut(s)	77, 111, 589, 712, 794, 1121, 1423
BstMWI	GCNNNNNNNGC	6 cut(s)	105, 189, 549, 1105, 1451, 1454
BstNI	CCWGG	3 cut(s)	124, 722, 1239
BstNSI	RCATGY	2 cut(s)	692, 1396
BstSCI	CCNGG	3 cut(s)	122, 720, 1237
BstSFI	CTRYAG	1 cut(s)	1035
BstSLI	GKGCMC	2 cut(s)	550, 968
BstV1I	GCAGC	3 cut(s)	1120, 1432, 1441
BstV2I	GAAGAC	1 cut(s)	188
BstX2I	RGATCY	2 cut(s)	794, 1121
BstXI	CCANNNNNNTGG	1 cut(s)	1378
BstYI	RGATCY	2 cut(s)	794, 1121
BstZ17I	GTATAC	1 cut(s)	1398
Bsu36I	CCTNAGG	1 cut(s)	837
BsuI	GTATCC	1 cut(s)	733
BsuRI	GGCC	3 cut(s)	213, 377, 1258
BtgZI	GCGATG	1 cut(s)	249
BtrI	CACGTC	1 cut(s)	851
BtsCI	GGATG	6 cut(s)	142, 183, 451, 730, 759, 1387
BtsIMutI	CAGTG	3 cut(s)	734, 1089, 1371
BveI	ACCTGC	2 cut(s)	739, 1078
Cac8I	GCNNGC	2 cut(s)	550, 690
CfoI	GCGC	1 cut(s)	543
Cfr10I	RCCGGY	1 cut(s)	1300
Cfr13I	GGNCC	3 cut(s)	358, 1256, 1435
Csp6I	GTAC	2 cut(s)	873, 1385
CviAII	CATG	6 cut(s)	229, 355, 523, 689, 1378, 1393
CviQI	GTAC	2 cut(s)	873, 1385
DdeI	CTNAG	7 cut(s)	188, 363, 837, 854, 1227, 1427, 1439
DpnI	GATC	7 cut(s)	79, 113, 591, 714, 796, 1123, 1425
DpnII	GATC	7 cut(s)	77, 111, 589, 712, 794, 1121, 1423
EaeI	YGGCCR	1 cut(s)	375
Eam1104I	CTCTTC	4 cut(s)	135, 284, 1142, 1260
EarI	CTCTTC	4 cut(s)	135, 284, 1142, 1260
Eco24I	GRGCYC	2 cut(s)	332, 1052
Eco47I	GGWCC	2 cut(s)	358, 1435
Eco57I	CTGAAG	2 cut(s)	194, 966
Eco81I	CCTNAGG	1 cut(s)	837
EcoO109I	RGGNCCY	1 cut(s)	1256
EcoRII	CCWGG	3 cut(s)	122, 720, 1237
EcoT22I	ATGCAT	1 cut(s)	185
EcoT38I	GRGCYC	2 cut(s)	332, 1052
FaeI	CATG	6 cut(s)	232, 358, 526, 692, 1381, 1396
FaqI	GGGAC	1 cut(s)	344
FatI	CATG	6 cut(s)	228, 354, 522, 688, 1377, 1392
FauI	CCCGC	1 cut(s)	557
FblI	GTMKAC	1 cut(s)	1397
Fnu4HI	GCNGC	3 cut(s)	1109, 1446, 1455
FokI	GGATG	6 cut(s)	149, 170, 458, 737, 766, 1394
FriOI	GRGCYC	2 cut(s)	332, 1052
Fsp4HI	GCNGC	3 cut(s)	1109, 1446, 1455
FspBI	CTAG	6 cut(s)	333, 389, 633, 824, 1341, 1449
GlaI	GCGC	1 cut(s)	542
GluI	GCNGC	3 cut(s)	1109, 1446, 1455
GsaI	CCCAGC	2 cut(s)	320, 1115
HaeII	RGCGCY	1 cut(s)	544
HaeIII	GGCC	3 cut(s)	213, 377, 1258
HapII	CCGG	1 cut(s)	1301
HhaI	GCGC	1 cut(s)	543
Hin1I	GRCGYC	1 cut(s)	150
Hin1II	CATG	6 cut(s)	232, 358, 526, 692, 1381, 1396
Hin6I	GCGC	1 cut(s)	541
HinP1I	GCGC	1 cut(s)	541
HincII	GTYRAC	2 cut(s)	208, 1197
HindII	GTYRAC	2 cut(s)	208, 1197
HindIII	AAGCTT	1 cut(s)	758
HinfI	GANTC	3 cut(s)	770, 1073, 1367
HpaII	CCGG	1 cut(s)	1301
HphI	GGTGA	2 cut(s)	38, 962
Hpy166II	GTNNAC	8 cut(s)	208, 352, 478, 966, 1197, 1371, 1398, 1435
Hpy188I	TCNGA	4 cut(s)	174, 946, 1126, 1170
Hpy188III	TCNNGA	5 cut(s)	286, 572, 659, 1009, 1421
Hpy8I	GTNNAC	8 cut(s)	208, 352, 478, 966, 1197, 1371, 1398, 1435
HpyAV	CCTTC	9 cut(s)	169, 442, 710, 914, 941, 996, 1006, 1165, 1408
HpyCH4III	ACNGT	3 cut(s)	324, 745, 1375
HpyCH4IV	ACGT	3 cut(s)	150, 781, 850
HpyF10VI	GCNNNNNNNGC	6 cut(s)	105, 189, 549, 1105, 1451, 1454
HpyF3I	CTNAG	7 cut(s)	188, 363, 837, 854, 1227, 1427, 1439
HpySE526I	ACGT	3 cut(s)	150, 781, 850
Hsp92I	GRCGYC	1 cut(s)	150
Hsp92II	CATG	6 cut(s)	232, 358, 526, 692, 1381, 1396
HspAI	GCGC	1 cut(s)	541
Kzo9I	GATC	7 cut(s)	77, 111, 589, 712, 794, 1121, 1423
LmnI	GCTCC	3 cut(s)	10, 128, 1171
Lsp1109I	GCAGC	3 cut(s)	1120, 1432, 1441
LweI	GCATC	3 cut(s)	192, 272, 1339
MaeI	CTAG	6 cut(s)	333, 389, 633, 824, 1341, 1449
MaeII	ACGT	3 cut(s)	150, 781, 850
MaeIII	GTNAC	5 cut(s)	26, 415, 625, 937, 980
MalI	GATC	7 cut(s)	79, 113, 591, 714, 796, 1123, 1425
MboI	GATC	7 cut(s)	77, 111, 589, 712, 794, 1121, 1423
MboII	GAAGA	6 cut(s)	152, 188, 301, 550, 1129, 1277
MfeI	CAATTG	1 cut(s)	1324
MflI	RGATCY	2 cut(s)	794, 1121
MhlI	GDGCHC	4 cut(s)	332, 550, 968, 1052
MlsI	TGGCCA	1 cut(s)	377
MluCI	AATT	4 cut(s)	638, 1056, 1242, 1324
MluNI	TGGCCA	1 cut(s)	377
MlyI	GAGTC	1 cut(s)	1376
Mox20I	TGGCCA	1 cut(s)	377
Mph1103I	ATGCAT	1 cut(s)	185
MroXI	GAANNNNTTC	1 cut(s)	293
MscI	TGGCCA	1 cut(s)	377
MseI	TTAA	4 cut(s)	270, 510, 617, 885
MslI	CAYNNNNRTG	3 cut(s)	411, 708, 1376
Msp20I	TGGCCA	1 cut(s)	377
MspA1I	CMGCKG	2 cut(s)	192, 1111
MspI	CCGG	1 cut(s)	1301
MspR9I	CCNGG	3 cut(s)	124, 722, 1239
MunI	CAATTG	1 cut(s)	1324
Mva1269I	GAATGC	2 cut(s)	185, 902
MvaI	CCWGG	3 cut(s)	124, 722, 1239
MwoI	GCNNNNNNNGC	6 cut(s)	105, 189, 549, 1105, 1451, 1454
NdeII	GATC	7 cut(s)	77, 111, 589, 712, 794, 1121, 1423
NlaIII	CATG	6 cut(s)	232, 358, 526, 692, 1381, 1396
NlaIV	GGNNCC	2 cut(s)	360, 486
NmuCI	GTSAC	4 cut(s)	26, 625, 937, 980
NsiI	ATGCAT	1 cut(s)	185
NspI	RCATGY	2 cut(s)	692, 1396
NspV	TTCGAA	1 cut(s)	534
PaeI	GCATGC	1 cut(s)	692
PciI	ACATGT	1 cut(s)	1392
PctI	GAATGC	2 cut(s)	185, 902
PdmI	GAANNNNTTC	1 cut(s)	293
PfeI	GAWTC	2 cut(s)	770, 1073
PflFI	GACNNNGTC	1 cut(s)	356
PkrI	GCNGC	3 cut(s)	1110, 1447, 1456
PleI	GAGTC	1 cut(s)	1375
PpsI	GAGTC	1 cut(s)	1375
PscI	ACATGT	1 cut(s)	1392
PsiI	TTATAA	2 cut(s)	345, 579
Psp6I	CCWGG	3 cut(s)	122, 720, 1237
PspFI	CCCAGC	2 cut(s)	316, 1111
PspGI	CCWGG	3 cut(s)	122, 720, 1237
PspN4I	GGNNCC	2 cut(s)	360, 486
PspPI	GGNCC	3 cut(s)	358, 1256, 1435
PsuI	RGATCY	2 cut(s)	794, 1121
PsyI	GACNNNGTC	1 cut(s)	356
PvuII	CAGCTG	1 cut(s)	1111
RsaI	GTAC	2 cut(s)	874, 1386
RsaNI	GTAC	2 cut(s)	873, 1385
RseI	CAYNNNNRTG	3 cut(s)	411, 708, 1376
SaqAI	TTAA	4 cut(s)	270, 510, 617, 885
SatI	GCNGC	3 cut(s)	1109, 1446, 1455
Sau3AI	GATC	7 cut(s)	77, 111, 589, 712, 794, 1121, 1423
Sau96I	GGNCC	3 cut(s)	358, 1256, 1435
SchI	GAGTC	1 cut(s)	1376
ScrFI	CCNGG	3 cut(s)	124, 722, 1239
SduI	GDGCHC	4 cut(s)	332, 550, 968, 1052
SfaNI	GCATC	3 cut(s)	192, 272, 1339
SfcI	CTRYAG	1 cut(s)	1035
SfuI	TTCGAA	1 cut(s)	534
SinI	GGWCC	2 cut(s)	358, 1435
SmiMI	CAYNNNNRTG	3 cut(s)	411, 708, 1376
SmlI	CTYRAG	1 cut(s)	215
SmoI	CTYRAG	1 cut(s)	215
SpeI	ACTAGT	1 cut(s)	1340
SphI	GCATGC	1 cut(s)	692
Sse9I	AATT	4 cut(s)	638, 1056, 1242, 1324
SsiI	CCGC	5 cut(s)	192, 550, 767, 860, 1205
SspMI	CTAG	6 cut(s)	333, 389, 633, 824, 1341, 1449
StyD4I	CCNGG	3 cut(s)	122, 720, 1237
TaaI	ACNGT	3 cut(s)	324, 745, 1375
TaiI	ACGT	3 cut(s)	153, 784, 853
TaqI	TCGA	1 cut(s)	534
TasI	AATT	4 cut(s)	638, 1056, 1242, 1324
TatI	WGTACW	1 cut(s)	1384
TfiI	GAWTC	2 cut(s)	770, 1073
Tru1I	TTAA	4 cut(s)	270, 510, 617, 885
Tru9I	TTAA	4 cut(s)	270, 510, 617, 885
TscAI	CASTG	3 cut(s)	741, 1089, 1378
TseFI	GTSAC	4 cut(s)	26, 625, 937, 980
TseI	GCWGC	3 cut(s)	1108, 1445, 1454
Tsp45I	GTSAC	4 cut(s)	26, 625, 937, 980
TspDTI	ATGAA	9 cut(s)	153, 395, 550, 597, 670, 692, 741, 770, 1323
TspGWI	ACGGA	1 cut(s)	264
TspRI	CASTG	3 cut(s)	741, 1089, 1378
Tth111I	GACNNNGTC	1 cut(s)	356
VneI	GTGCAC	1 cut(s)	964
VpaK11BI	GGWCC	2 cut(s)	358, 1435
XceI	RCATGY	2 cut(s)	692, 1396
XcmI	CCANNNNNNNNNTGG	1 cut(s)	130
XmiI	GTMKAC	1 cut(s)	1397
XmnI	GAANNNNTTC	1 cut(s)	293
XspI	CTAG	6 cut(s)	333, 389, 633, 824, 1341, 1449
ZraI	GACGTC	1 cut(s)	151
Zsp2I	ATGCAT	1 cut(s)	185

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.