Rh7CG461200

Guanosine nucleotide diphosphate dissociation inhibitor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0002570
Physical Location & Seq
Reverse (-)
61218448 .. 61219191
744 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG461200.1

Sequence Viewer

Length: 396 bp
ATGGATAGGAATGACTATTACGGAGGAGAGTGTGCATCACTTAATCTTATTCAGCTCTGGAAGAGGTTCAGGGGAGATGATAAGCCCCCAGCCCAGTTGGGCTCTAGTAGGGATTATAATGTGGACATGGTCCCTAAGTTTATGATGGCCAATGGAACGCTAGTGCGTGTCCTTATTCATACAGATGTTACCAAGTATTTGTCCTTCAAAGCTGTGGATGGTAGTTTTGTCTATAATAAAGGAAAGGTTCACAAGGTTCCAGCAAATGATATGGAGGCACTTAAATCTATGGAGGCACTTAAATCTCCACTCATGGGTCTATTTGAAAAGCGCCGTGCCCGAAAGTTCTTCATAGAGATGATCGCTACCTGGATGAACCTGCACTGGATACTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001558 GO:0003674 GO:0005092 GO:0005093 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005911 GO:0007154 GO:0007165 GO:0007264 GO:0007265 GO:0007275 GO:0007399 GO:0008150 GO:0008361 GO:0009506 GO:0009987 GO:0010035 GO:0010038 GO:0010720 GO:0010721 GO:0010769 GO:0010770 GO:0010771 GO:0010975 GO:0010976 GO:0010977 GO:0016043 GO:0017016 GO:0017137 GO:0019899 GO:0022008 GO:0022603 GO:0022604 GO:0023052 GO:0030054 GO:0030154 GO:0030234 GO:0030307 GO:0030424 GO:0030516 GO:0030695 GO:0031267 GO:0031344 GO:0031345 GO:0031346 GO:0032386 GO:0032387 GO:0032482 GO:0032501 GO:0032502 GO:0032535 GO:0032879 GO:0032880 GO:0032991 GO:0033157 GO:0035556 GO:0036477 GO:0040008 GO:0042221 GO:0042995 GO:0043005 GO:0043025 GO:0043209 GO:0044297 GO:0044424 GO:0044444 GO:0044464 GO:0045595 GO:0045596 GO:0045597 GO:0045664 GO:0045665 GO:0045666 GO:0045773 GO:0045927 GO:0048046 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048638 GO:0048639 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050767 GO:0050768 GO:0050769 GO:0050770 GO:0050771 GO:0050772 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050896 GO:0051020 GO:0051049 GO:0051051 GO:0051093 GO:0051094 GO:0051128 GO:0051129 GO:0051130 GO:0051223 GO:0051224 GO:0051239 GO:0051240 GO:0051241 GO:0051592 GO:0051716 GO:0051960 GO:0051961 GO:0051962 GO:0055044 GO:0060284 GO:0060341 GO:0060589 GO:0061387 GO:0065007 GO:0065008 GO:0065009 GO:0070201 GO:0071840 GO:0090066 GO:0090087 GO:0090313 GO:0090315 GO:0090317 GO:0097458 GO:0098772 GO:0120025 GO:0120035 GO:1903533 GO:1903827 GO:1903828 GO:1904950 GO:1905475 GO:1905476 GO:2000026
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GDI

Protein Analysis

131

Amino Acids

15.17

Weight (kDa)

9.52

Isoelectric Point (pI)

36.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GDI PF00996 1 - 118 8.6e-56 GDP dissociation inhibitor
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 117
Acc36I ACCTGC 1 cut(s) 387
AcoI YGGCCR 1 cut(s) 147
AfiI CCNNNNNNNGG 1 cut(s) 314
AgsI TTSAA 2 cut(s) 208, 326
AjnI CCWGG 1 cut(s) 368
AluBI AGCT 2 cut(s) 55, 212
AluI AGCT 2 cut(s) 55, 212
AoxI GGCC 1 cut(s) 147
Asp700I GAANNNNTTC 1 cut(s) 65
AspLEI GCGC 1 cut(s) 333
AspS9I GGNCC 1 cut(s) 130
AvaII GGWCC 1 cut(s) 130
BaeGI GKGCMC 1 cut(s) 340
BalI TGGCCA 1 cut(s) 149
BanII GRGCYC 1 cut(s) 104
BarI GAAGNNNNNNTAC 2 cut(s) 188, 220
BccI CCATC 2 cut(s) 139, 212
BceAI ACGGC 1 cut(s) 318
BciT130I CCWGG 1 cut(s) 370
BciVI GTATCC 1 cut(s) 381
BfaI CTAG 2 cut(s) 105, 161
BfoI RGCGCY 1 cut(s) 334
BfuAI ACCTGC 1 cut(s) 387
BfuI GTATCC 1 cut(s) 381
Bme1390I CCNGG 1 cut(s) 370
Bme18I GGWCC 1 cut(s) 130
BmgT120I GGNCC 1 cut(s) 130
BmiI GGNNCC 2 cut(s) 132, 258
BmrFI CCNGG 1 cut(s) 370
BmrI ACTGGG 1 cut(s) 88
BmsI GCATC 1 cut(s) 44
BmuI ACTGGG 1 cut(s) 88
Bsc4I CCNNNNNNNGG 1 cut(s) 314
Bse1I ACTGG 2 cut(s) 94, 389
BseBI CCWGG 1 cut(s) 370
BseGI GGATG 2 cut(s) 223, 378
BseLI CCNNNNNNNGG 1 cut(s) 314
BseNI ACTGG 2 cut(s) 94, 389
BseRI GAGGAG 1 cut(s) 39
BseSI GKGCMC 1 cut(s) 340
BseYI CCCAGC 1 cut(s) 88
BsgI GTGCAG 1 cut(s) 365
BshFI GGCC 1 cut(s) 149
BslFI GGGAC 1 cut(s) 116
BslI CCNNNNNNNGG 1 cut(s) 314
BsmFI GGGAC 1 cut(s) 116
BsnI GGCC 1 cut(s) 149
Bsp1286I GDGCHC 2 cut(s) 104, 340
Bsp143I GATC 1 cut(s) 360
BspANI GGCC 1 cut(s) 149
BspLI GGNNCC 2 cut(s) 132, 258
BspMI ACCTGC 1 cut(s) 387
BsrI ACTGG 2 cut(s) 94, 389
BssMI GATC 1 cut(s) 360
Bst2UI CCWGG 1 cut(s) 370
Bst4CI ACNGT 1 cut(s) 393
Bst6I CTCTTC 1 cut(s) 56
BstDEI CTNAG 1 cut(s) 135
BstF5I GGATG 2 cut(s) 223, 378
BstH2I RGCGCY 1 cut(s) 334
BstHHI GCGC 1 cut(s) 333
BstKTI GATC 1 cut(s) 363
BstMBI GATC 1 cut(s) 360
BstNI CCWGG 1 cut(s) 370
BstSCI CCNGG 1 cut(s) 368
BstSLI GKGCMC 1 cut(s) 340
BsuI GTATCC 1 cut(s) 381
BsuRI GGCC 1 cut(s) 149
BtsCI GGATG 2 cut(s) 223, 378
BtsIMutI CAGTG 1 cut(s) 382
BveI ACCTGC 1 cut(s) 387
CfoI GCGC 1 cut(s) 333
Cfr13I GGNCC 1 cut(s) 130
CviAII CATG 2 cut(s) 127, 313
CviJI RGCY 6 cut(s) 55, 85, 92, 102, 149, 212
CviKI_1 RGCY 6 cut(s) 55, 85, 92, 102, 149, 212
DdeI CTNAG 1 cut(s) 135
DpnI GATC 1 cut(s) 362
DpnII GATC 1 cut(s) 360
EaeI YGGCCR 1 cut(s) 147
Eam1104I CTCTTC 1 cut(s) 56
EarI CTCTTC 1 cut(s) 56
Eco24I GRGCYC 1 cut(s) 104
Eco47I GGWCC 1 cut(s) 130
EcoRII CCWGG 1 cut(s) 368
EcoT38I GRGCYC 1 cut(s) 104
FaeI CATG 2 cut(s) 130, 316
FaiI YATR 9 cut(s) 117, 128, 143, 180, 234, 272, 290, 314, 353
FaqI GGGAC 1 cut(s) 116
FatI CATG 2 cut(s) 126, 312
FokI GGATG 2 cut(s) 230, 385
FriOI GRGCYC 1 cut(s) 104
FspBI CTAG 2 cut(s) 105, 161
GlaI GCGC 1 cut(s) 332
GsaI CCCAGC 1 cut(s) 92
HaeII RGCGCY 1 cut(s) 334
HaeIII GGCC 1 cut(s) 149
HhaI GCGC 1 cut(s) 333
Hin1II CATG 2 cut(s) 130, 316
Hin6I GCGC 1 cut(s) 331
HinP1I GCGC 1 cut(s) 331
Hpy166II GTNNAC 2 cut(s) 124, 250
Hpy188III TCNNGA 1 cut(s) 58
Hpy8I GTNNAC 2 cut(s) 124, 250
HpyAV CCTTC 1 cut(s) 214
HpyCH4III ACNGT 1 cut(s) 393
HpyCH4V TGCA 2 cut(s) 35, 382
HpyF3I CTNAG 1 cut(s) 135
Hsp92II CATG 2 cut(s) 130, 316
HspAI GCGC 1 cut(s) 331
Kzo9I GATC 1 cut(s) 360
LpnPI CCDG 9 cut(s) 43, 55, 102, 107, 273, 355, 370, 382, 392
LweI GCATC 1 cut(s) 44
MaeI CTAG 2 cut(s) 105, 161
MaeIII GTNAC 1 cut(s) 187
MalI GATC 1 cut(s) 362
MboI GATC 1 cut(s) 360
MboII GAAGA 2 cut(s) 73, 340
MhlI GDGCHC 2 cut(s) 104, 340
MlsI TGGCCA 1 cut(s) 149
MluNI TGGCCA 1 cut(s) 149
MnlI CCTC 4 cut(s) 17, 57, 268, 286
Mox20I TGGCCA 1 cut(s) 149
MroXI GAANNNNTTC 1 cut(s) 65
MscI TGGCCA 1 cut(s) 149
MseI TTAA 3 cut(s) 42, 282, 300
MslI CAYNNNNRTG 2 cut(s) 183, 356
Msp20I TGGCCA 1 cut(s) 149
MspR9I CCNGG 1 cut(s) 370
MvaI CCWGG 1 cut(s) 370
NdeII GATC 1 cut(s) 360
NlaIII CATG 2 cut(s) 130, 316
NlaIV GGNNCC 2 cut(s) 132, 258
PdmI GAANNNNTTC 1 cut(s) 65
PflFI GACNNNGTC 1 cut(s) 128
PsiI TTATAA 1 cut(s) 117
Psp6I CCWGG 1 cut(s) 368
PspFI CCCAGC 1 cut(s) 88
PspGI CCWGG 1 cut(s) 368
PspN4I GGNNCC 2 cut(s) 132, 258
PspPI GGNCC 1 cut(s) 130
PsyI GACNNNGTC 1 cut(s) 128
RseI CAYNNNNRTG 2 cut(s) 183, 356
SaqAI TTAA 3 cut(s) 42, 282, 300
Sau3AI GATC 1 cut(s) 360
Sau96I GGNCC 1 cut(s) 130
ScrFI CCNGG 1 cut(s) 370
SduI GDGCHC 2 cut(s) 104, 340
SetI ASST 7 cut(s) 57, 68, 214, 249, 258, 371, 381
SfaNI GCATC 1 cut(s) 44
SinI GGWCC 1 cut(s) 130
SmiMI CAYNNNNRTG 2 cut(s) 183, 356
SspMI CTAG 2 cut(s) 105, 161
StyD4I CCNGG 1 cut(s) 368
TaaI ACNGT 1 cut(s) 393
Tru1I TTAA 3 cut(s) 42, 282, 300
Tru9I TTAA 3 cut(s) 42, 282, 300
TscAI CASTG 1 cut(s) 389
TspDTI ATGAA 3 cut(s) 167, 340, 389
TspGWI ACGGA 1 cut(s) 36
TspRI CASTG 1 cut(s) 389
Tth111I GACNNNGTC 1 cut(s) 128
VpaK11BI GGWCC 1 cut(s) 130
XmnI GAANNNNTTC 1 cut(s) 65
XspI CTAG 2 cut(s) 105, 161
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.