Rh2BG000800

Guanosine nucleotide diphosphate dissociation inhibitor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0002570
Physical Location & Seq
Reverse (-)
119347 .. 124100
4754 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG000800.1

Sequence Viewer

Length: 1239 bp
ATGGATAGGAATGACTATTACGGAGGAGAGTGTGCATCACTTAATCTTATTCAGCTCTGGAAGAGGTTCAGGGGAGATGATAAGCCCCCAGCACAGTTGGGCTCTAGTAGGGATTATAATGTGGACATGGTCCCTAAGTTTATGATGGCCAATGGAACTCTAGTGCGTGTCCTCATTCATACAGATGTTACCAAGTATTTGTCCTTCAAAGCTGTGGATGGCAGTTTTGTCTATAATAAAGGAAAGGTTCACAAGGTTCCAGCAAATGATATGGAGGCACTTAAATCTCCACTCATGGGTCTATTCGAAAAGCGCCGTGCCCGCAAGTTCTTCATATATGTTCAAGATTATAATGAAAGCGATCCCAAAACACACGAGGGAATGGACTTAACAAGAGTGACAACTAGAGAATTGATTGCAAAATATGGTCTTGATGACAACACTATTGACTTCATTGGGCATGCTTTAGCACTTCATAGAGATGATCGCTACCTGGATGAACCTGCACTGGATACTGTGAAAAGGATGAAGCTTTATGCGGAATCTATTGCACGTTTTCAAGGAGGATCTCCATACATTTATCCTTTGTATGGACTAGGAGAGCTTCCTCAGGCATTTGCACGACTTAGTGCGGTTTATGGTGGTACTTATATGCTTAATAAACCTGAATGCAAGGTGGAGTTCAATGAGGAAGGGAAAGTTATTGGTGTCACATCTGAAGGTGAAACTGCCAAGTGCACAAAAGTTGTCTGTGACCCTTCTTACTTACCCAACAAGGTCAGAAAGGTTGGTAAGGTTGCAAGGGCTATAGCCATTATGAGCCACCCGATTCCAAACACAAATGATTCTCATTCAGTGCAGGTTATCCTGCCACAAAAGCAGCTGGGTCGCAGATCAGATATGTATCTCTTCTGTTCCTCTTACTCTCACAATGTTGCTCCGAAGGGAAAGTTTATTGCGTTTGTGTCAACGGAGGCGGAAACTGATAATCCACATACTGAGCTAAAGCCAGGAATTGACCTTTTAGGGCCTGTTGAAGAGATATTTTTTGATATTTATGACAGATATGAGCCGGTCAATGAACCCTCTTTGGACAATTGCTTTATATCAACTAGTTATGATGCGACAACACACTTTGAGTCCACTGTCATGGATGTACTCAACATGTATACCTTGATAACAGGGAAGGTTCTTGATCTTAGCGTGGACCTAAGTGCTGCTAGTGCTGCCGAAGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001558 GO:0003674 GO:0005092 GO:0005093 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005911 GO:0007154 GO:0007165 GO:0007264 GO:0007265 GO:0007275 GO:0007399 GO:0008150 GO:0008361 GO:0009506 GO:0009987 GO:0010035 GO:0010038 GO:0010720 GO:0010721 GO:0010769 GO:0010770 GO:0010771 GO:0010975 GO:0010976 GO:0010977 GO:0016043 GO:0017016 GO:0017137 GO:0019899 GO:0022008 GO:0022603 GO:0022604 GO:0023052 GO:0030054 GO:0030154 GO:0030234 GO:0030307 GO:0030424 GO:0030516 GO:0030695 GO:0031267 GO:0031344 GO:0031345 GO:0031346 GO:0032386 GO:0032387 GO:0032482 GO:0032501 GO:0032502 GO:0032535 GO:0032879 GO:0032880 GO:0032991 GO:0033157 GO:0035556 GO:0036477 GO:0040008 GO:0042221 GO:0042995 GO:0043005 GO:0043025 GO:0043209 GO:0044297 GO:0044424 GO:0044444 GO:0044464 GO:0045595 GO:0045596 GO:0045597 GO:0045664 GO:0045665 GO:0045666 GO:0045773 GO:0045927 GO:0048046 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048638 GO:0048639 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050767 GO:0050768 GO:0050769 GO:0050770 GO:0050771 GO:0050772 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050896 GO:0051020 GO:0051049 GO:0051051 GO:0051093 GO:0051094 GO:0051128 GO:0051129 GO:0051130 GO:0051223 GO:0051224 GO:0051239 GO:0051240 GO:0051241 GO:0051592 GO:0051716 GO:0051960 GO:0051961 GO:0051962 GO:0055044 GO:0060284 GO:0060341 GO:0060589 GO:0061387 GO:0065007 GO:0065008 GO:0065009 GO:0070201 GO:0071840 GO:0090066 GO:0090087 GO:0090313 GO:0090315 GO:0090317 GO:0097458 GO:0098772 GO:0120025 GO:0120035 GO:1903533 GO:1903827 GO:1903828 GO:1904950 GO:1905475 GO:1905476 GO:2000026
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GDI

Protein Analysis

412

Amino Acids

46.31

Weight (kDa)

5.76

Isoelectric Point (pI)

37.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GDI PF00996 1 - 401 2.5e-211 GDP dissociation inhibitor
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 117, 351
Acc36I ACCTGC 2 cut(s) 511, 850
AccI GTMKAC 1 cut(s) 1169
AciI CCGC 4 cut(s) 322, 539, 632, 977
AclWI GGATC 2 cut(s) 356, 574
AcoI YGGCCR 1 cut(s) 147
AcuI CTGAAG 1 cut(s) 738
AfaI GTAC 2 cut(s) 646, 1158
AfiI CCNNNNNNNGG 2 cut(s) 296, 590
AflIII ACRYGT 1 cut(s) 1164
AgsI TTSAA 5 cut(s) 208, 344, 560, 685, 1037
AhlI ACTAGT 1 cut(s) 1112
AjnI CCWGG 2 cut(s) 492, 1009
AluBI AGCT 6 cut(s) 55, 212, 532, 604, 883, 1003
AluI AGCT 6 cut(s) 55, 212, 532, 604, 883, 1003
Alw21I GWGCWC 1 cut(s) 740
Alw44I GTGCAC 1 cut(s) 736
AlwI GGATC 2 cut(s) 356, 574
AoxI GGCC 2 cut(s) 147, 1028
ApaLI GTGCAC 1 cut(s) 736
ApeKI GCWGC 3 cut(s) 880, 1217, 1226
Asp700I GAANNNNTTC 1 cut(s) 65
AspLEI GCGC 1 cut(s) 315
AspS9I GGNCC 3 cut(s) 130, 1028, 1207
AsuHPI GGTGA 1 cut(s) 734
AsuII TTCGAA 1 cut(s) 306
AvaII GGWCC 2 cut(s) 130, 1207
AxyI CCTNAGG 1 cut(s) 609
BaeGI GKGCMC 2 cut(s) 322, 740
BalI TGGCCA 1 cut(s) 149
BanII GRGCYC 1 cut(s) 104
BarI GAAGNNNNNNTAC 2 cut(s) 188, 220
BauI CACGAG 1 cut(s) 374
Bbv12I GWGCWC 1 cut(s) 740
BbvI GCAGC 3 cut(s) 892, 1204, 1213
BccI CCATC 2 cut(s) 139, 212
BceAI ACGGC 1 cut(s) 300
BcgI CGANNNNNNTGC 2 cut(s) 869, 903
BciT130I CCWGG 2 cut(s) 494, 1011
BciVI GTATCC 1 cut(s) 505
BcuI ACTAGT 1 cut(s) 1112
BfaI CTAG 6 cut(s) 105, 161, 405, 596, 1113, 1221
BfmI CTRYAG 1 cut(s) 807
BfoI RGCGCY 1 cut(s) 316
BfuAI ACCTGC 2 cut(s) 511, 850
BfuI GTATCC 1 cut(s) 505
BisI GCNGC 3 cut(s) 881, 1218, 1227
BlsI GCNGC 3 cut(s) 882, 1219, 1228
Bme1390I CCNGG 2 cut(s) 494, 1011
Bme18I GGWCC 2 cut(s) 130, 1207
BmgT120I GGNCC 3 cut(s) 130, 1028, 1207
BmiI GGNNCC 2 cut(s) 132, 258
BmrFI CCNGG 2 cut(s) 494, 1011
BmsI GCATC 2 cut(s) 44, 1111
Bpu14I TTCGAA 1 cut(s) 306
BsaBI GATNNNNATC 1 cut(s) 903
Bsc4I CCNNNNNNNGG 2 cut(s) 296, 590
Bse118I RCCGGY 1 cut(s) 1072
Bse1I ACTGG 1 cut(s) 513
Bse21I CCTNAGG 1 cut(s) 609
Bse8I GATNNNNATC 1 cut(s) 903
BseBI CCWGG 2 cut(s) 494, 1011
BseGI GGATG 4 cut(s) 223, 502, 531, 1159
BseJI GATNNNNATC 1 cut(s) 903
BseLI CCNNNNNNNGG 2 cut(s) 296, 590
BseMII CTCAG 2 cut(s) 623, 990
BseNI ACTGG 1 cut(s) 513
BseRI GAGGAG 1 cut(s) 39
BseSI GKGCMC 2 cut(s) 322, 740
BseXI GCAGC 3 cut(s) 892, 1204, 1213
BseYI CCCAGC 2 cut(s) 88, 883
BsgI GTGCAG 2 cut(s) 489, 878
BshFI GGCC 2 cut(s) 149, 1030
BsiHKAI GWGCWC 1 cut(s) 740
BsiSI CCGG 1 cut(s) 1073
BslFI GGGAC 1 cut(s) 116
BslI CCNNNNNNNGG 2 cut(s) 296, 590
BsmFI GGGAC 1 cut(s) 116
BsmI GAATGC 1 cut(s) 674
BsnI GGCC 2 cut(s) 149, 1030
Bsp119I TTCGAA 1 cut(s) 306
Bsp1286I GDGCHC 3 cut(s) 104, 322, 740
Bsp143I GATC 5 cut(s) 361, 484, 566, 893, 1195
BspACI CCGC 4 cut(s) 322, 539, 632, 977
BspANI GGCC 2 cut(s) 149, 1030
BspCNI CTCAG 2 cut(s) 622, 991
BspLI GGNNCC 2 cut(s) 132, 258
BspMI ACCTGC 2 cut(s) 511, 850
BspPI GGATC 2 cut(s) 356, 574
BspT104I TTCGAA 1 cut(s) 306
BsrFI RCCGGY 1 cut(s) 1072
BsrI ACTGG 1 cut(s) 513
BssAI RCCGGY 1 cut(s) 1072
BssMI GATC 5 cut(s) 361, 484, 566, 893, 1195
BssNAI GTATAC 1 cut(s) 1170
BssSI CACGAG 1 cut(s) 374
Bst1107I GTATAC 1 cut(s) 1170
Bst2BI CACGAG 1 cut(s) 374
Bst2UI CCWGG 2 cut(s) 494, 1011
Bst4CI ACNGT 3 cut(s) 96, 517, 1147
Bst6I CTCTTC 3 cut(s) 56, 914, 1032
BstBI TTCGAA 1 cut(s) 306
BstC8I GCNNGC 2 cut(s) 322, 462
BstDEI CTNAG 6 cut(s) 135, 609, 626, 999, 1199, 1211
BstF5I GGATG 4 cut(s) 223, 502, 531, 1159
BstH2I RGCGCY 1 cut(s) 316
BstHHI GCGC 1 cut(s) 315
BstKTI GATC 5 cut(s) 364, 487, 569, 896, 1198
BstMBI GATC 5 cut(s) 361, 484, 566, 893, 1195
BstMWI GCNNNNNNNGC 4 cut(s) 321, 877, 1223, 1226
BstNI CCWGG 2 cut(s) 494, 1011
BstNSI RCATGY 2 cut(s) 464, 1168
BstSCI CCNGG 2 cut(s) 492, 1009
BstSFI CTRYAG 1 cut(s) 807
BstSLI GKGCMC 2 cut(s) 322, 740
BstV1I GCAGC 3 cut(s) 892, 1204, 1213
BstX2I RGATCY 1 cut(s) 566
BstXI CCANNNNNNTGG 1 cut(s) 1150
BstYI RGATCY 1 cut(s) 566
BstZ17I GTATAC 1 cut(s) 1170
Bsu36I CCTNAGG 1 cut(s) 609
BsuI GTATCC 1 cut(s) 505
BsuRI GGCC 2 cut(s) 149, 1030
BtsCI GGATG 4 cut(s) 223, 502, 531, 1159
BtsIMutI CAGTG 3 cut(s) 506, 861, 1143
BveI ACCTGC 2 cut(s) 511, 850
Cac8I GCNNGC 2 cut(s) 322, 462
CfoI GCGC 1 cut(s) 315
Cfr10I RCCGGY 1 cut(s) 1072
Cfr13I GGNCC 3 cut(s) 130, 1028, 1207
Csp6I GTAC 2 cut(s) 645, 1157
CviAII CATG 5 cut(s) 127, 295, 461, 1150, 1165
CviQI GTAC 2 cut(s) 645, 1157
DdeI CTNAG 6 cut(s) 135, 609, 626, 999, 1199, 1211
DpnI GATC 5 cut(s) 363, 486, 568, 895, 1197
DpnII GATC 5 cut(s) 361, 484, 566, 893, 1195
EaeI YGGCCR 1 cut(s) 147
Eam1104I CTCTTC 3 cut(s) 56, 914, 1032
EarI CTCTTC 3 cut(s) 56, 914, 1032
EciI GGCGGA 1 cut(s) 992
Eco24I GRGCYC 1 cut(s) 104
Eco47I GGWCC 2 cut(s) 130, 1207
Eco57I CTGAAG 1 cut(s) 738
Eco81I CCTNAGG 1 cut(s) 609
EcoO109I RGGNCCY 1 cut(s) 1028
EcoRII CCWGG 2 cut(s) 492, 1009
EcoT38I GRGCYC 1 cut(s) 104
FaeI CATG 5 cut(s) 130, 298, 464, 1153, 1168
FaqI GGGAC 1 cut(s) 116
FatI CATG 5 cut(s) 126, 294, 460, 1149, 1164
FauI CCCGC 1 cut(s) 329
FblI GTMKAC 1 cut(s) 1169
Fnu4HI GCNGC 3 cut(s) 881, 1218, 1227
FokI GGATG 4 cut(s) 230, 509, 538, 1166
FriOI GRGCYC 1 cut(s) 104
Fsp4HI GCNGC 3 cut(s) 881, 1218, 1227
FspBI CTAG 6 cut(s) 105, 161, 405, 596, 1113, 1221
GlaI GCGC 1 cut(s) 314
GluI GCNGC 3 cut(s) 881, 1218, 1227
GsaI CCCAGC 2 cut(s) 92, 887
HaeII RGCGCY 1 cut(s) 316
HaeIII GGCC 2 cut(s) 149, 1030
HapII CCGG 1 cut(s) 1073
HhaI GCGC 1 cut(s) 315
Hin1II CATG 5 cut(s) 130, 298, 464, 1153, 1168
Hin6I GCGC 1 cut(s) 313
HinP1I GCGC 1 cut(s) 313
HincII GTYRAC 1 cut(s) 969
HindII GTYRAC 1 cut(s) 969
HindIII AAGCTT 1 cut(s) 530
HinfI GANTC 4 cut(s) 542, 829, 845, 1139
HpaII CCGG 1 cut(s) 1073
HphI GGTGA 1 cut(s) 734
Hpy166II GTNNAC 7 cut(s) 124, 250, 738, 969, 1143, 1170, 1207
Hpy188I TCNGA 4 cut(s) 718, 782, 898, 942
Hpy188III TCNNGA 4 cut(s) 58, 344, 431, 1193
Hpy8I GTNNAC 7 cut(s) 124, 250, 738, 969, 1143, 1170, 1207
HpyAV CCTTC 6 cut(s) 214, 686, 713, 768, 937, 1180
HpyCH4III ACNGT 3 cut(s) 96, 517, 1147
HpyCH4IV ACGT 1 cut(s) 553
HpyCH4V TGCA 9 cut(s) 35, 419, 506, 551, 620, 672, 738, 800, 859
HpyF10VI GCNNNNNNNGC 4 cut(s) 321, 877, 1223, 1226
HpyF3I CTNAG 6 cut(s) 135, 609, 626, 999, 1199, 1211
HpySE526I ACGT 1 cut(s) 553
Hsp92II CATG 5 cut(s) 130, 298, 464, 1153, 1168
HspAI GCGC 1 cut(s) 313
Kzo9I GATC 5 cut(s) 361, 484, 566, 893, 1195
LmnI GCTCC 1 cut(s) 943
Lsp1109I GCAGC 3 cut(s) 892, 1204, 1213
LweI GCATC 2 cut(s) 44, 1111
MaeI CTAG 6 cut(s) 105, 161, 405, 596, 1113, 1221
MaeII ACGT 1 cut(s) 553
MaeIII GTNAC 4 cut(s) 187, 397, 709, 752
MalI GATC 5 cut(s) 363, 486, 568, 895, 1197
MboI GATC 5 cut(s) 361, 484, 566, 893, 1195
MboII GAAGA 4 cut(s) 73, 322, 901, 1049
MfeI CAATTG 1 cut(s) 1096
MflI RGATCY 1 cut(s) 566
MhlI GDGCHC 3 cut(s) 104, 322, 740
MlsI TGGCCA 1 cut(s) 149
MluCI AATT 3 cut(s) 410, 1014, 1096
MluNI TGGCCA 1 cut(s) 149
MlyI GAGTC 1 cut(s) 1148
Mox20I TGGCCA 1 cut(s) 149
MroXI GAANNNNTTC 1 cut(s) 65
MscI TGGCCA 1 cut(s) 149
MseI TTAA 4 cut(s) 42, 282, 389, 657
MslI CAYNNNNRTG 3 cut(s) 183, 480, 1148
Msp20I TGGCCA 1 cut(s) 149
MspA1I CMGCKG 1 cut(s) 883
MspI CCGG 1 cut(s) 1073
MspR9I CCNGG 2 cut(s) 494, 1011
MunI CAATTG 1 cut(s) 1096
Mva1269I GAATGC 1 cut(s) 674
MvaI CCWGG 2 cut(s) 494, 1011
MwoI GCNNNNNNNGC 4 cut(s) 321, 877, 1223, 1226
NdeII GATC 5 cut(s) 361, 484, 566, 893, 1195
NlaIII CATG 5 cut(s) 130, 298, 464, 1153, 1168
NlaIV GGNNCC 2 cut(s) 132, 258
NmuCI GTSAC 3 cut(s) 397, 709, 752
NspI RCATGY 2 cut(s) 464, 1168
NspV TTCGAA 1 cut(s) 306
PaeI GCATGC 1 cut(s) 464
PciI ACATGT 1 cut(s) 1164
PctI GAATGC 1 cut(s) 674
PdmI GAANNNNTTC 1 cut(s) 65
PfeI GAWTC 3 cut(s) 542, 829, 845
PflFI GACNNNGTC 1 cut(s) 128
PkrI GCNGC 3 cut(s) 882, 1219, 1228
PleI GAGTC 1 cut(s) 1147
PpsI GAGTC 1 cut(s) 1147
PscI ACATGT 1 cut(s) 1164
PsiI TTATAA 2 cut(s) 117, 351
Psp6I CCWGG 2 cut(s) 492, 1009
PspFI CCCAGC 2 cut(s) 88, 883
PspGI CCWGG 2 cut(s) 492, 1009
PspN4I GGNNCC 2 cut(s) 132, 258
PspPI GGNCC 3 cut(s) 130, 1028, 1207
PsuI RGATCY 1 cut(s) 566
PsyI GACNNNGTC 1 cut(s) 128
PvuII CAGCTG 1 cut(s) 883
RsaI GTAC 2 cut(s) 646, 1158
RsaNI GTAC 2 cut(s) 645, 1157
RseI CAYNNNNRTG 3 cut(s) 183, 480, 1148
SaqAI TTAA 4 cut(s) 42, 282, 389, 657
SatI GCNGC 3 cut(s) 881, 1218, 1227
Sau3AI GATC 5 cut(s) 361, 484, 566, 893, 1195
Sau96I GGNCC 3 cut(s) 130, 1028, 1207
SchI GAGTC 1 cut(s) 1148
ScrFI CCNGG 2 cut(s) 494, 1011
SduI GDGCHC 3 cut(s) 104, 322, 740
SfaNI GCATC 2 cut(s) 44, 1111
SfcI CTRYAG 1 cut(s) 807
SfuI TTCGAA 1 cut(s) 306
SinI GGWCC 2 cut(s) 130, 1207
SmiMI CAYNNNNRTG 3 cut(s) 183, 480, 1148
SpeI ACTAGT 1 cut(s) 1112
SphI GCATGC 1 cut(s) 464
Sse9I AATT 3 cut(s) 410, 1014, 1096
SsiI CCGC 4 cut(s) 322, 539, 632, 977
SspMI CTAG 6 cut(s) 105, 161, 405, 596, 1113, 1221
StyD4I CCNGG 2 cut(s) 492, 1009
TaaI ACNGT 3 cut(s) 96, 517, 1147
TaiI ACGT 1 cut(s) 556
TaqI TCGA 1 cut(s) 306
TasI AATT 3 cut(s) 410, 1014, 1096
TatI WGTACW 1 cut(s) 1156
TfiI GAWTC 3 cut(s) 542, 829, 845
Tru1I TTAA 4 cut(s) 42, 282, 389, 657
Tru9I TTAA 4 cut(s) 42, 282, 389, 657
TscAI CASTG 3 cut(s) 513, 861, 1150
TseFI GTSAC 3 cut(s) 397, 709, 752
TseI GCWGC 3 cut(s) 880, 1217, 1226
Tsp45I GTSAC 3 cut(s) 397, 709, 752
TspDTI ATGAA 8 cut(s) 167, 322, 369, 442, 464, 513, 542, 1095
TspGWI ACGGA 2 cut(s) 36, 986
TspRI CASTG 3 cut(s) 513, 861, 1150
Tth111I GACNNNGTC 1 cut(s) 128
VneI GTGCAC 1 cut(s) 736
VpaK11BI GGWCC 2 cut(s) 130, 1207
XceI RCATGY 2 cut(s) 464, 1168
XmiI GTMKAC 1 cut(s) 1169
XmnI GAANNNNTTC 1 cut(s) 65
XspI CTAG 6 cut(s) 105, 161, 405, 596, 1113, 1221
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.